Pregenerated sensors for SPPL2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049506Ensembl transcript IDs: ENSMUST00000059448.8, ENSMUST00000107000.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGAGCTGTTTGTGGAGGCAGAGAGGCCTaGGCCTTGGGGAGACTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LSTPGCNSYLESLPRAVCGGREA*ALGRLL Trigger: TAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCC...ACAAACAGCTCTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGAGCTGTTTGTTTGGGCTCCCAAGAATaGGGCTCAGGAGAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LSTPGCNSYLESLPRAVCLGSQE*GSGEEA Trigger: TGCCTCCTCTCCTGAGCCTCATTCTTGGGAGCCCAA...ACAAACAGCTCTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGAGAGAGGCCTGGGCCTaGGGGAGACTCCTAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQREAWA*GRLLGV Trigger: CACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCT...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGCAGAGAGGCCTGGGCCTTGGGGAGACTCCTAGGTGTGGGGGCGGGGAGAAGTGGGGCATGGTaGAGGTCCCGGGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RGGREAWALGRLLGVGAGRSGAW*RSRGRL Trigger: CAACCTCCCCCGGGACCTGCACCATGCCCCACTTCT...CCCCGCCCCCACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCCTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAGGCAGAGAGGCCTGGGCCTTGGGGAGACTCCTAGGTGTGGGGGCGGGGTCATGGCGACAAAGGTaGCCAGCAGGCCCACGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RGGREAWALGRLLGVGAGSWRQR*PAGPRH Trigger: ATGCCGTGGGCCTGCTGGTCACCTTTGTCGCCATGA...CCCCGCCCCCACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGCAGAGAGGCCTGGGCCTTGGGGAGACTCCTAGGTGTGGGGGCGGGGGCTCAGCAGGAATCTTaGCTCTGCCCTGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RGGREAWALGRLLGVGAGAQQES*LCPGQS Trigger: GGACTGGCCAGGGCAGAGCCAAGATTCCTGCTGAGC...CCCCGCCCCCACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAGGCAGAGAGGCCTGGGCCTTGGGGAGACTCCTAGGTGTGGGGGCGGGGCCACAGCAAGGCTGGTaGGCAGAGTGCTGGACACTA | + |
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Preference number: 4 (lower is better) Translates to: RGGREAWALGRLLGVGAGPQQGW*AECWTL Trigger: TAGTGTCCAGCACTCTGCTCACCAGCCTTGCTGTGG...CCCCGCCCCCACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGAGGCAGAGAGGCCTGGGCCTTGGGGAGACTCCTAGGTGTGGGGGCGGGCCCCAAAGCCAAGGATaGAGAAGGGCTGGTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: ERRQRGLGLGETPRCGGGPQSQG*RRAGCT Trigger: TGTGCAACCAGCCCTTCTCCATCCTTGGCTTTGGGG...CCCGCCCCCACACCTAGGAGTCTCCCCAAGGCCCAGGCCTCTCTGCCTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCGCGGAGCACGGCCACTaGGATGGTGAGGGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELAEHGH*DGEGRP Trigger: TGGCCTGCCCTCACCATCCCAGTGGCCGTGCTCCGC...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGGGGCAGGCCAGGGCTTaGTGGGGTCCTGGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQGQARA*WGPGAL Trigger: CAAAGCCCCAGGACCCCAGCAAGCCCTGGCCTGCCC...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAATGGCCTCTAGGGCCATaGGGGAGCCAGAGGGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPREWPLGP*GSQRVA Trigger: AGCTACCCTCTGGCTCCCCCATGGCCCTAGAGGCCA...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR TCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAAGGTCCCGGGGGAGGTTaGCGTAGTCAGAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPREGPGGG*RSQSCT Trigger: TGTACAGCTCTGACTACGTCAACCTCCCCCGGGACC...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGTGGAGCAGGACATGGTaGCCACAGCGCCCGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQWSRTW*PQRPSW Trigger: CCATGACGGGCGCTGTGGTCACCATGTCCTGCTCCA...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | TTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGAGCTGTTTGTGACAGAAGTGGGGCATaGTGCAGGTCCCGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSTPGCNSYLESLPRAVCDRSGA*CRSRGR Trigger: CCTCCCCCGGGACCTGCACCATGCCCCACTTCTGTC...ACAAACAGCTCTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR TCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACAGTCCAGAAAAGGGTaGACTCTTGGCGGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPREQSRKG*TLGGRW Trigger: CCACCTGCCGCCAAGAGTTCACCCTTTTCTGGACTG...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAAGGGCAGGCCAGGGCTTaGTGGGGTCCTGGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEGQARA*WGPGAL Trigger: CAAAGCCCCAGGACCCCAGCAAGCCCTGGCCTGCCC...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | GCCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTAGTGAGCCCAAGGGGTaGAGGGAACCCAGGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: ACVSVFEHPRLQQLLGVISEPKG*REPRHA Trigger: GGCATGCCTGGGTTCCCTCCACCCCTTGGGCTCACT...AATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCGGCTTGCTGGGGTCCTaGGGCTTTGAGATGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELGLLGS*GFEMVS Trigger: AGACACCATCTCAAAGCCCCAGGACCCCAGCAAGCC...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCAACAGGCTCGAGGGGTaGAAACATGGCTACTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELNRLEG*KHGYSD Trigger: GTCCGAGTAGCCATGTTTGCACCCCTCGAGCCTGTT...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAAACACCCAAAGTGTCCTaGAGGAGCCATGCCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPRETPKVS*RSHAQW Trigger: CCATTGGGCATGGCTCCTGCAGGACACTTTGGGTGT...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAAGACAGAAGTGGGGCATaGTGCAGGTCCCGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEDRSGA*CRSRGR Trigger: CCTCCCCCGGGACCTGCACCATGCCCCACTTCTGTC...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCCTAGGGGAACTGTCCTaGGCCTGGTGGAAAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELLGELS*AWWKES Trigger: AGACTCTTTCCACCAGGCCCAGGACAGTTCCCCTAG...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | TTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATATTCTTGACAGAAGCGGAGCACGGCCACTaGGATGGTGAGGGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPRAVCSRQHCCGIFLTEAEHGH*DGEGRP Trigger: TGGCCTGCCCTCACCATCCCAGTGGCCGTGCTCCGC...TTCTGTCAAGAATATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGCCTCCTCTTTGGGCCTaGCGCCTCTGCAGCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQPPLWA*RLCSLF Trigger: AAACAAGCTGCAGAGGCGCCAGGCCCAAAGAGGAGG...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCAGGATGGAGAAGGGCTaGTTGCACAACGTCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELRMEKG*LHNVKA Trigger: CGCCTTGACGTTGTGCAACCAGCCCTTCTCCATCCT...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCCCCCAAAGCCAAGGATaGAGAAGGGCTGGTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELPQSQG*RRAGCT Trigger: TGTGCAACCAGCCCTTCTCCATCCTTGGCTTTGGGG...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACCTCCAGCTTCATCTTaGAGCCCACAGCAGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPREPPASS*SPQQRQ Trigger: TTGCCTCTGCTGTGGGCTCCAAGATGAAGCTGGAGG...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGGGTCCCGGGGGAGGTTaGCGTAGTCAGAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: GSDFFALAWAPKNEAQERGPGGG*RSQSCT Trigger: TGTACAGCTCTGACTACGTCAACCTCCCCCGGGACC...CCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGGTGTCTGAACACTGTTaGTTCCTGGCCCGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQVSEHC*FLARLT Trigger: TGTGAGCCGGGCCAGGAATCAACAGTGTTCAGACAC...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR TCA 90 bp | CCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCAGTCCAGAAAAGGGTaGACTCTTGGCGGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PVCLCLSTPGCNSYLESLQSRKG*TLGGRW Trigger: CCACCTGCCGCCAAGAGTTCACCCTTTTCTGGACTG...CAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR GCA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAATGGAGAAGGGCTGGTTaGACAACGTCAAGGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SIPVQCSGSPLRGAGPREWRRAG*TTSRRK Trigger: TTTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCA...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCCAGGAATCTTGGCTCTaGCCTGGCCAGTCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELQESWL*PGQSRK Trigger: TTTTCTGGACTGGCCAGGGCAGAGCCAAGATTCCTG...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCTATCGTCCCCAGTGCTaGTCTCTAAGTCCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELYRPQC*SLSPLT Trigger: AGTCAGGGGACTTAGAGAGCAGCACTGGGGACGATA...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGATGCAGGGACAGAAGTaGGGCATGGTGCAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQEMQGQK*GMVQVP Trigger: CGGGACCTGCACCATGCCCCACTTCTGTCCCTGCAT...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | GAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATATTCTTGCGCCATAGGGGCAGGTaGCACAGTATGGGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESLPRAVCSRQHCCGIFLRHRGR*HSMGAR Trigger: CCTGGCACCCATACTGTGCCACCTGCCCCTATGGCG...CAAGAATATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTCGGAGGGGTGTGGGATTaGTTGGATCAGTGGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: IPVQCSGSPLRGAGPRELGGVWD*LDQWDQ Trigger: TTGATCCCACTGATCCAACCAATCCCACACCCCTCC...GAGTTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGTCATGGCGACAAAGGTaGCCAGCAGGCCCACGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSLMPDLLSCLASPCSVLSWRQR*PAGPRH Trigger: ATGCCGTGGGCCTGCTGGTCACCTTTGTCGCCATGA...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | AAGATAGGGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGAGAAGTGGGGCATGGTaGAGGTCCCGGGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KIGSFSNARSLILSSIPVRSGAW*RSRGRL Trigger: CAACCTCCCCCGGGACCTGCACCATGCCCCACTTCT...CACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCCCTATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR GCA 90 bp | TGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCGTCTTGGTGCCATCATaGAGGGACAGAAGTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CVSVFEHPRLQQLLGVIAVLVPS*RDRSGA Trigger: TGCCCCACTTCTGTCCCTGCATGATGGCACCAAGAC...GGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGGTCCTGCAGGAGCCATaGCCAATGGTCCTCATTTCG | + |
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Preference number: 4 (lower is better) Translates to: PVCLCLSTPGCNSYLESLVLQEP*PMVLIS Trigger: CGAAATGAGGACCATTGGGCATGGCTCCTGCAGGAC...CAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTAGTGAGCCCAAGGGGTaGAGGGAACCCAGGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSSEPKG*REPRHA Trigger: GGCATGCCTGGGTTCCCTCCACCCCTTGGGCTCACT...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGGGCTTGCTGGGGTCCTaGGGCTTTGAGATGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQEGLLGS*GFEMVS Trigger: AGACACCATCTCAAAGCCCCAGGACCCCAGCAAGCC...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGTCTTCCCAGGCCCTTTaGGACCTCTCAGCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQESSQAL*DLSAAT Trigger: AGTGGCAGCTGAGAGGTCCCAAAGGGCCTGGGAAGA...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTCGCCATAGGGGCAGGTaGCACAGTATGGGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSRHRGR*HSMGAR Trigger: CCTGGCACCCATACTGTGCCACCTGCCCCTATGGCG...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CCA 90 bp | GCCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTCCTCCAGCTTCATCTTaGAGCCCACAGCAGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ACVSVFEHPRLQQLLGVIPPASS*SPQQRQ Trigger: TTGCCTCTGCTGTGGGCTCCAAGATGAAGCTGGAGG...AATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| 3UTR CAA 72 bp | TGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTaGGAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLCLSTPGCNSY*ESLPRAVCSRQ Trigger: CTGCCTGCTACAAACAGCTCTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGCCACAGCAAGGCTGGTaGGCAGAGTGCTGGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSLMPDLLSCLASPCSVLPQQGW*AECWTL Trigger: TAGTGTCCAGCACTCTGCTCACCAGCCTTGCTGTGG...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGAACAGGCTCGAGGGGTaGAAACATGGCTACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSDFFALAWAPKNEAQERNRLEG*KHGYSD Trigger: GTCCGAGTAGCCATGTTTGCACCCCTCGAGCCTGTT...CCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTCCTCTGCAGCTTGTTTaGCTCCATCAAACCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACVSVFEHPRLQQLLGVIPLQLV*LHQTSP Trigger: TGGGCTGGTTTGATGGAGGCAAACAAGCTGCAGAGG...AATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGACACCCAAAGTGTCCTaGAGGAGCCATGCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQETPKVS*RSHAQW Trigger: CCATTGGGCATGGCTCCTGCAGGACACTTTGGGTGT...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCTGTCCTGGGCCTGGTaGAAAGAGTCTTCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVSVFEHPRLQQLLGVIALSWAW*KESSSG Trigger: TCCAGATGAAGACTCTTTCCACCAGGCCCAGGACAG...GGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAACCTCCTCTTTGGGCCTaGCGCCTCTGCAGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEPPLWA*RLCSLF Trigger: AAACAAGCTGCAGAGGCGCCAGGCCCAAAGAGGAGG...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTTCTTCCCAGGCCCTTTaGGACCTCTCAGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVSSQAL*DLSAAT Trigger: AGTGGCAGCTGAGAGGTCCCAAAGGGCCTGGGAAGA...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGCGCCCGTCATGGCTaGTGTGAAATCCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQESARHG*CEIHRC Trigger: GCACCTATGGATTTCACACCAGCCATGACGGGCGCT...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGAGGAGCCATGCCCAATaGTCCTCATTTCGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PVCLCLSTPGCNSYLESLRSHAQ*SSFRWM Trigger: CATCCACCGAAATGAGGACCATTGGGCATGGCTCCT...CAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAAAAGGGTGAACTCTTaGCGGCAGGTGGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQEKRVNS*RQVATA Trigger: TGCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTT...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGCTCAGCAGGAATCTTaGCTCTGCCCTGGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSAQQES*LCPGQS Trigger: GGACTGGCCAGGGCAGAGCCAAGATTCCTGCTGAGC...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAACATTGGGGTCCAGGTTaGTGTCACTCCAGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEHWGPG*CHSSPQ Trigger: CTGAGGGCTGGAGTGACACCAACCTGGACCCCAATG...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAATCAGTGGGATCAACATaGCCTCTAGGGCCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLESVGST*PLGPWG Trigger: CCCCCATGGCCCTAGAGGCCATGTTGATCCCACTGA...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTGTGTCTGAACACTGTTaGTTCCTGGCCCGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVVSEHC*FLARLT Trigger: TGTGAGCCGGGCCAGGAATCAACAGTGTTCAGACAC...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR TCA 90 bp | TACTTGGAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATACCTCATTTCGGTGGATaGCCCAGAGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YLESLPRAVCSRQHCCGIPHFGG*PRGQSP Trigger: TGGTGACTGTCCTCTGGGTCATCCACCGAAATGAGG...TATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTCCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAACCTCATTTCGGTGGATaGCCCAGAGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEPHFGG*PRGQSP Trigger: TGGTGACTGTCCTCTGGGTCATCCACCGAAATGAGG...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGGGACACAGTAGTCCTTaGTCCAGTTCTTTGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQGHSSP*SSSLTR Trigger: TCGTGTCAAAGAACTGGAGCAAGGACTACTGTGTCC...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAAGTCCTGCAGGAGCCATaGCCAATGGTCCTCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEVLQEP*PMVLIS Trigger: CGAAATGAGGACCATTGGGCATGGCTCCTGCAGGAC...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGTGGAGAAGGGCTGGTTaGACAACGTCAAGGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQEWRRAG*TTSRRK Trigger: TTTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCA...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGCAGGAATCTTGGCTCTaGCCTGGCCAGTCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSDFFALAWAPKNEAQEQESWL*PGQSRK Trigger: TTTTCTGGACTGGCCAGGGCAGAGCCAAGATTCCTG...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGGAACTGTCCTGGGCCTaGTGGAAAGAGTCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVCLCLSTPGCNSYLESLELSWA*WKESSS Trigger: AGATGAAGACTCTTTCCACCAGGCCCAGGACAGTTC...CAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGAGGCTAGGGGAACTGTCCTaGGCCTGGTGGAAAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDFFALAWAPKNEAQERRLGELS*AWWKES Trigger: AGACTCTTTCCACCAGGCCCAGGACAGTTCCCCTAG...CCTCCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGAGGGAGCCAGCCAGCCCTTaGCATAGAAGCTACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDFFALAWAPKNEAQERREPASP*HRSYSC Trigger: GCAACTGTAGCTTCTATGCCAAGGGCTGGCTGGCTC...CCTCCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTGAGCCAGCCAGCCCTTaGCATAGAAGCTACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVEPASP*HRSYSC Trigger: GCAACTGTAGCTTCTATGCCAAGGGCTGGCTGGCTC...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATATTCTTGAGGATGGAGAAGGGCTaGTTGCACAACGTCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESLPRAVCSRQHCCGIFLRMEKG*LHNVKA Trigger: CGCCTTGACGTTGTGCAACCAGCCCTTCTCCATCCT...CAAGAATATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAAAAAAGGGTGAACTCTTaGCGGCAGGTGGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLMPDLLSCLASPCSVLEKRVNS*RQVATA Trigger: TGCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTT...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATATTCTTGATCTTGGCTCTGCCCTaGCCAGTCCAGAAAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLPRAVCSRQHCCGIFLILALP*PVQKRV Trigger: CACCCTTTTCTGGACTGGCCAGGGCAGAGCCAAGAT...CAAGAATATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CCA 90 bp | AAGATAGGGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGCTCGGAGGGGTGTaGGATTGGTTGGATCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIGSFSNARSLILSSIPVQLGGV*DWLDQW Trigger: CCACTGATCCAACCAATCCCACACCCCTCCGAGCTG...CACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCCCTATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTAAGCCCTTTCTCTTGTaGAACCCCATCCAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSKPFLL*NPIQGR Trigger: CCTGCCCTGGATGGGGTTGCACAAGAGAAAGGGCTT...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | AAGATAGGGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGAGCGCCCGTCATGGCTaGTGTGAAATCCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIGSFSNARSLILSSIPVSARHG*CEIHRC Trigger: GCACCTATGGATTTCACACCAGCCATGACGGGCGCT...CACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCCCTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTATCTTGGCTCTGCCCTaGCCAGTCCAGAAAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSILALP*PVQKRV Trigger: CACCCTTTTCTGGACTGGCCAGGGCAGAGCCAAGAT...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTCAGAGGGTAGCTCATTaGGGTCCAGGTTGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSQRVAH*GPGWCH Trigger: GTGACACCAACCTGGACCCCAATGAGCTACCCTCTG...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTCCTCTGCAGCTTGTTTaGCTCCATCAAACCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSPLQLV*LHQTSP Trigger: TGGGCTGGTTTGATGGAGGCAAACAAGCTGCAGAGG...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTCTGTCCTGGGCCTGGTaGAAAGAGTCTTCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSLSWAW*KESSSG Trigger: TCCAGATGAAGACTCTTTCCACCAGGCCCAGGACAG...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTGAACTGTCCTGGGCCTaGTGGAAAGAGTCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVELSWA*WKESSS Trigger: AGATGAAGACTCTTTCCACCAGGCCCAGGACAGTTC...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTAGGAGCCATGCCCAATaGTCCTCATTTCGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSRSHAQ*SSFRWM Trigger: CATCCACCGAAATGAGGACCATTGGGCATGGCTCCT...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGGGTGTGGGATTGGTTaGATCAGTGGGATCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: VSLMPDLLSCLASPCSVLGCGIG*ISGINM Trigger: CATGTTGATCCCACTGATCCAACCAATCCCACACCC...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGAGAATCTGCTGGACCTaGTGCCACTTCTACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSDFFALAWAPKNEAQERRICWT*CHFYHN Trigger: ATTATGGTAGAAGTGGCATCAGGTCCAGCAGATTCT...CCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTCATCCTCAGATAGGGTaGCCATCTCTGCCATATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSNARSLILSSIPVQCSHPQIG*PSLPYR Trigger: ACGATATGGCAGAGATGGTCACCCTATCTGAGGATG...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGGACACAGTAGTCCTTaGTCCAGTTCTTTGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLMPDLLSCLASPCSVLGHSSP*SSSLTR Trigger: TCGTGTCAAAGAACTGGAGCAAGGACTACTGTGTCC...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTAGAATCTGCTGGACCTaGTGCCACTTCTACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVRICWT*CHFYHN Trigger: ATTATGGTAGAAGTGGCATCAGGTCCAGCAGATTCT...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR GCA 90 bp | TCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGAGGTTGGGACCTCTCAGCTaGCACTGTTTGTTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SDFFALAWAPKNEAQERRLGPLS*HCLLLI Trigger: AATCAACAACAAACAGTGGCAGCTGAGAGGTCCCAA...CCTCCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTTTGGGACCTCTCAGCTaGCACTGTTTGTTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVSLMPDLLSCLASPCSVLGPLS*HCLLLI Trigger: AATCAACAACAAACAGTGGCAGCTGAGAGGTCCCAA...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS GCA 90 bp | GGGCCTGGTGGAAAGAGTCTTCATCTGGACACCAGGGTGTCTTGGTaGCATCATGCAGGGACAGAAGTGGGGCATGGTGCAGGTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGGKSLHLDTRVSW*HHAGTEVGHGAGPG Trigger: CCCGGGACCTGCACCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCACCAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS GCA 90 bp | CTCCAGCTTCATCTTGGAGCCCACAGCAGAGGCAATGCAGGGCTGTaGCACAGGCTCAGCAGGAATCTTGGCTCTGCCCTGGCCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLHLGAHSRGNAGL*HRLSRNLGSALASP Trigger: TGGACTGGCCAGGGCAGAGCCAAGATTCCTGCTGAGCCTGTGGCACAGCCCTGCATTGCCTCTGCTGTGGGCTCCAAGATGAAGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAACTGGGCGCCTTGATCTaGAGCCAGCCAGCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIPVQCSGSPLRGAGPRELGALI*SQPALG Trigger: GCCAAGGGCTGGCTGGCTCAAGATCAAGGCGCCCAG...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CCA 90 bp | CCTGGGCCTGGTGGAAAGAGTCTTCATCTGGACACCAGGGTGTCTTaGTGCCATCATGCAGGGACAGAAGTGGGGCATGGTGCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPGGKSLHLDTRVS*CHHAGTEVGHGAGP Trigger: GGGACCTGCACCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCACCAGGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAAGGCTCAGCAGGAATCTaGGCTCTGCCCTGGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIPVQCSGSPLRGAGPREGSAGI*ALPWPV Trigger: GACTGGCCAGGGCAGAGCCAAGATTCCTGCTGAGCC...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS TCA 90 bp | GTAGTCAGAGCTGTACAGGACACAGTAGTCCTTGCTCCAGTTCTTTaGCACGACTCGGACCAGGCCGTATTCTCCCCGGGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVRAVQDTVVLAPVL*HDSDQAVFSPGLGA Trigger: AGCCCCGAGGCCCGGGGAGAATACGGCCTGGTCCGAGTCGTGTCAAAGAACTGGAGCAAGGACTACTGTGTCCTGTACAGCTCTGACTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS TCA 90 bp | CATGCAGGGACAGAAGTGGGGCATGGTGCAGGTCCCGGGGGAGGTTaGCGTAGTCAGAGCTGTACAGGACACAGTAGTCCTTGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HAGTEVGHGAGPGGG*RSQSCTGHSSPCSS Trigger: ACTGGAGCAAGGACTACTGTGTCCTGTACAGCTCTGACTACGTCAACCTCCCCCGGGACCTGCACCATGCCCCACTTCTGTCCCTGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS GCA 90 bp | TGGAAAGAGTCTTCATCTGGACACCAGGGTGTCTTGGTGCCATCATaGAGGGACAGAAGTGGGGCATGGTGCAGGTCCCGGGGGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKESSSGHQGVLVPS*RDRSGAWCRSRGRL Trigger: CAACCTCCCCCGGGACCTGCACCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS GCA 90 bp | TCACCTTCAAGCCCTTTCTCTTGTGCAACCCCATCCAGGGCAGGCTaGTATCATGGACCCGAGATTGAGTGCGGATGTGGCCCAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSPFSCATPSRAG*YHGPEIECGCGPAR Trigger: CCGAGCTGGGCCACATCCGCACTCAATCTCGGGTCCATGATAGCAGCCTGCCCTGGATGGGGTTGCACAAGAGAAAGGGCTTGAAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS CCA 90 bp | GTCTGGTGCAGGGGTCGCTGTCTAGGGGAACTGTCCTGGGCCTGGTaGAAAGAGTCTTCATCTGGACACCAGGGTGTCTTGGTGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VWCRGRCLGELSWAW*KESSSGHQGVLVPS Trigger: TGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCACCAGGCCCAGGACAGTTCCCCTAGACAGCGACCCCTGCACCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAAGGACACCAGGGTGTCTaGGTGCCATCATGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SIPVQCSGSPLRGAGPREGHQGV*VPSCRD Trigger: GTCCCTGCATGATGGCACCAAGACACCCTGGTGTCC...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGGGCTCAGCAGGAATCTaGGCTCTGCCCTGGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQGSAGI*ALPWPV Trigger: GACTGGCCAGGGCAGAGCCAAGATTCCTGCTGAGCC...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS TCA 90 bp | TCTCGCTGTGGCCCTCTGGACTCGTGGCTTCATCCTCAGATAGGGTaGCCATCTCTGCCATATCGTCCCCAGTGCTGCTCTCTAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCGPLDSWLHPQIG*PSLPYRPQCCSLSP Trigger: GGGACTTAGAGAGCAGCACTGGGGACGATATGGCAGAGATGGTCACCCTATCTGAGGATGAAGCCACGAGTCCAGAGGGCCACAGCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGATCTTCCCAGGCCCTTaGGGACCTCTCAGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSVFEHPRLQQLLGVIAQIFPGP*GPLSCH Trigger: GTGGCAGCTGAGAGGTCCCAAAGGGCCTGGGAAGAT...CTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS CCA 90 bp | AGTAATGGCCATGTTACAGAAACCCGTTGTCCAGGCAAGACCCACTaGTATCGCCATAGGGGCAGGTGGCACAGTATGGGTGCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNGHVTETRCPGKTH*YRHRGRWHSMGARQ Trigger: CTGCCTGGCACCCATACTGTGCCACCTGCCCCTATGGCGATACCAGTGGGTCTTGCCTGGACAACGGGTTTCTGTAACATGGCCATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | TACTTGGAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATACTGGGCGCCTTGATCTaGAGCCAGCCAGCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YLESLPRAVCSRQHCCGILGALI*SQPALG Trigger: GCCAAGGGCTGGCTGGCTCAAGATCAAGGCGCCCAG...TATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTCCAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCCCCGTGCAGTGTTCTGGAAGCCCTTTGAGAGGTGCAGGTCCTAGGGAAATGGAGAAGGGCTGGTaGCACAACGTCAAGGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIPVQCSGSPLRGAGPREMEKGW*HNVKAE Trigger: TTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCAT...TTCCCTAGGACCTGCACCTCTCAAAGGGCTTCCAGAACACTGCACGGGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGGAAAAGGGTGAACTCTaGGCGGCAGGTGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVCLCLSTPGCNSYLESLEKGEL*AAGGHS Trigger: GCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTTC...CAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS TCA 90 bp | GCTGGTTGCACAACGTCAAGGCGGAAAAGCTTAGCCGGGGCACCTTaGGCACCATTGGTAACCTCTCGTGGCTTGAAGAATCTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGCTTSRRKSLAGAP*APLVTSRGLKNLLD Trigger: GTCCAGCAGATTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAGCTTTTCCGCCTTGACGTTGTGCAACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS CCA 90 bp | AGGCCACTAGGAAGCCAGGGACAACAATGTCCCCAAAGCCAAGGATaGAGAAGGGCTGGTTGCACAACGTCAAGGCGGAAAAGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLGSQGQQCPQSQG*RRAGCTTSRRKSLA Trigger: GGCTAAGCTTTTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCATCCTTGGCTTTGGGGACATTGTTGTCCCTGGCTTCCTAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCTTAGCCGGGGCACCTaGAGCACCATTGGTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: CVSVFEHPRLQQLLGVIALSRGT*STIGNL Trigger: GAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAG...GGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | TACTTGGAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATAGGACACCAGGGTGTCTaGGTGCCATCATGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLESLPRAVCSRQHCCGIGHQGV*VPSCRD Trigger: GTCCCTGCATGATGGCACCAAGACACCCTGGTGTCC...TATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTCCAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCCAGAGCTGTTTGTTGGCGCCTCTGCAGCTaGTTTGCCTCCATCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTPGCNSYLESLPRAVCWRLCS*FASIKP Trigger: TGGTTTGATGGAGGCAAACAAGCTGCAGAGGCGCCA...ACAAACAGCTCTGGGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGATCTTCCCAGGCCCTTaGGGACCTCTCAGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLMPDLLSCLASPCSVLIFPGP*GPLSCH Trigger: GTGGCAGCTGAGAGGTCCCAAAGGGCCTGGGAAGAT...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGCCATGGAGAAGGGCTGGTaGCACAACGTCAAGGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CVSVFEHPRLQQLLGVIAMEKGW*HNVKAE Trigger: TTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCAT...GGCAATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | GCCTGTGTGTCTGTGTTTGAGCACCCCAGGCTGCAACAGCTACTTGGAGTCATTGTAGACCTGGCGAGATaGGACTTGCATGTCGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ACVSVFEHPRLQQLLGVIVDLAR*DLHVEA Trigger: CGCTTCGACATGCAAGTCCAATCTCGCCAGGTCTAC...AATGACTCCAAGTAGCTGTTGCAGCCTGGGGTGCTCAAACACAGACACACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAAAAGGGTGAACTCTaGGCGGCAGGTGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLMPDLLSCLASPCSVLEKGEL*AAGGHS Trigger: GCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTTC...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGTCCTCCAGCTTCATCTaGGAGCCCACAGCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSDFFALAWAPKNEAQERSSSFI*EPTAEA Trigger: TGCCTCTGCTGTGGGCTCCAAGATGAAGCTGGAGGA...CCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATTGCCCAGAGCTGTTTGTAGCAGGCAGCATTGCTGTGGCATATTCTTGGCCTCTGCAGCTTGTTaGCCTCCATCAAACCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLPRAVCSRQHCCGIFLASAAC*PPSNQP Trigger: GGGCTGGTTTGATGGAGGCAAACAAGCTGCAGAGGC...CAAGAATATGCCACAGCAATGCTGCCTGCTACAAACAGCTCTGGGCAATGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | TCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGGAATCATTGGGGTCCAGGTaGGTGTCACTCCAGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLMPDLLSCLASPCSVLESLGSR*VSLQPS Trigger: TGAGGGCTGGAGTGACACCAACCTGGACCCCAATGA...TTCCAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCGGAGGGGTGTGGGATaGGTTGGATCAGTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSLMPDLLSCLASPCSVRRGVG*VGSVGS Trigger: TGATCCCACTGATCCAACCAATCCCACACCCCTCCG...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGTGGCGCCTCTGCAGCTaGTTTGCCTCCATCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLMPDLLSCLASPCSVLWRLCS*FASIKP Trigger: TGGTTTGATGGAGGCAAACAAGCTGCAGAGGCGCCA...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | AAGATAGGGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCTTAGCCGGGGCACCTaGAGCACCATTGGTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIGSFSNARSLILSSIPVLSRGT*STIGNL Trigger: GAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAG...CACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCCCTATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTTCCTCCAGCTTCATCTaGGAGCCCACAGCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSNARSLILSSIPVQCSSSSFI*EPTAEA Trigger: TGCCTCTGCTGTGGGCTCCAAGATGAAGCTGGAGGA...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CCA 90 bp | GAAAAGCTTAGCCGGGGCACCTTGAGCACCATTGGTAACCTCTCGTaGCTTGAAGAATCTGCTGGACCTGATGCCACTTCTACCATAATG | + |
|
Preference number: 5 (lower is better) Translates to: EKLSRGTLSTIGNLS*LEESAGPDATSTIM Trigger: CATTATGGTAGAAGTGGCATCAGGTCCAGCAGATTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GCTGGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGCTCAGCTGCCACTGTTaGTTGTTGATTGTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGSDFFALAWAPKNEAQELSCHC*LLIVTT Trigger: GGTGGTCACAATCAACAACAAACAGTGGCAGCTGAG...CTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTGATTTCTTTGCTTTAGCTTGGGCTCCCAAGAATGAGGCTCAGGAGAGGATGCTCTCACCAGTCTaGGTGAACAGGGGAGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GSDFFALAWAPKNEAQERMLSPV*VNRGVI Trigger: TATCACTCCCCTGTTCACCAAGACTGGTGAGAGCAT...CCTCTCCTGAGCCTCATTCTTGGGAGCCCAAGCTAAAGCAAAGAAATCAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059448.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGTAGACCTGGCGAGATaGGACTTGCATGTCGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSNARSLILSSIPVQCSVDLAR*DLHVEA Trigger: CGCTTCGACATGCAAGTCCAATCTCGCCAGGTCTAC...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTGGGGTGTGGGATTGGTaGGATCAGTGGGATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GVSLMPDLLSCLASPCSVGVWDW*DQWDQH Trigger: ATGTTGATCCCACTGATCCAACCAATCCCACACCCC...AACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS GCA 90 bp | GATGAAGATAATCGCCATGTTATAGTCAGTAACAGGCTCGAGGGGTaGAAACATGGCTACTCGGACATCGGTGTCACCGTAAGTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DEDNRHVIVSNRLEG*KHGYSDIGVTVSVA Trigger: AGCCACACTTACGGTGACACCGATGTCCGAGTAGCCATGTTTGCACCCCTCGAGCCTGTTACTGACTATAACATGGCGATTATCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTGCTCAGCTGCCACTGTTaGTTGTTGATTGTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSLMPDLLSCLASPCSVLLSCHC*LLIVTT Trigger: GGTGGTCACAATCAACAACAAACAGTGGCAGCTGAG...CAGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTCTAATGCCCGATCTCTTATCCTGTCTAGCATCCCCGTGCAGTGTTCTATGCTCTCACCAGTCTaGGTGAACAGGGGAGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: SFSNARSLILSSIPVQCSMLSPV*VNRGVI Trigger: TATCACTCCCCTGTTCACCAAGACTGGTGAGAGCAT...AGAACACTGCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS TCA 72 bp | CTCGGACCAGGCCGTATTCTCCCCGGGCCTCGGGGCTaGGGAGGAGGAGGAGGAAGAGGAGGAGGAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPGRILPGPRG*GGGGGRGGGVS Trigger: GCTCACTCCTCCTCCTCTTCCTCCTCCTCCTCCTCAGCCCCGAGGCCCGGGGAGAATACGGCCTGGTCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS TCA 72 bp | CCCATCCAGGGCAGGCTGCTATCATGGACCCGAGATTaGGTGCGGATGTGGCCCAGCTCGGAGGGGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PIQGRLLSWTRD*VRMWPSSEGCG Trigger: CCCACACCCCTCCGAGCTGGGCCACATCCGCACTCAATCTCGGGTCCATGATAGCAGCCTGCCCTGGATGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS CAA 72 bp | CCCCATCCAGGGCAGGCTGCTATCATGGACCCGAGATaGAGTGCGGATGTGGCCCAGCTCGGAGGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PHPGQAAIMDPR*SADVAQLGGVW Trigger: CCACACCCCTCCGAGCTGGGCCACATCCGCACTCAATCTCGGGTCCATGATAGCAGCCTGCCCTGGATGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
||
| CDS CAA 72 bp | GGCTCTGCCCTGGCCAGTCCAGAAAAGGGTGAACTCTaGGCGGCAGGTGGCCACAGCAAGGCTGGTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSALASPEKGEL*AAGGHSKAGEQ Trigger: CTGCTCACCAGCCTTGCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTTCTGGACTGGCCAGGGCAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS CCA 72 bp | GCTCTGCCCTGGCCAGTCCAGAAAAGGGTGAACTCTTaGCGGCAGGTGGCCACAGCAAGGCTGGTGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALPWPVQKRVNS*RQVATARLVSR Trigger: TCTGCTCACCAGCCTTGCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTTCTGGACTGGCCAGGGCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS CAA 72 bp | CCTGGCCCGGCTCACAATGAGCAACCCCTGGGCGCCTaGATCTTGAGCCAGCCAGCCCTTGGCATAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPAHNEQPLGA*ILSQPALGIEA Trigger: AGCTTCTATGCCAAGGGCTGGCTGGCTCAAGATCAAGGCGCCCAGGGGTTGCTCATTGTGAGCCGGGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
||
| CDS TCA 72 bp | GAATCTTGGCTCTGCCCTGGCCAGTCCAGAAAAGGGTaGACTCTTGGCGGCAGGTGGCCACAGCAAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ESWLCPGQSRKG*TLGGRWPQQGW Trigger: CCAGCCTTGCTGTGGCCACCTGCCGCCAAGAGTTCACCCTTTTCTGGACTGGCCAGGGCAGAGCCAAGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CCA 72 bp | CAGGCCAGGGCTTGCTGGGGTCCTGGGGCTTTGAGATaGTGTCTGAACACTGTTGATTCCTGGCCCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QARACWGPGALR*CLNTVDSWPGS Trigger: TGAGCCGGGCCAGGAATCAACAGTGTTCAGACACCATCTCAAAGCCCCAGGACCCCAGCAAGCCCTGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CCA 72 bp | CGGATGTGGCCCAGCTCGGAGGGGTGTGGGATTGGTTaGATCAGTGGGATCAACATGGCCTCTAGGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RMWPSSEGCGIG*ISGINMASRAM Trigger: CATGGCCCTAGAGGCCATGTTGATCCCACTGATCCAACCAATCCCACACCCCTCCGAGCTGGGCCACATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CAA 90 bp | CGTAGTCAGAGCTGTACAGGACACAGTAGTCCTTGCTCCAGTTCTTaGACACGACTCGGACCAGGCCGTATTCTCCCCGGGCCTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RSQSCTGHSSPCSSS*TRLGPGRILPGPRG Trigger: GCCCCGAGGCCCGGGGAGAATACGGCCTGGTCCGAGTCGTGTCAAAGAACTGGAGCAAGGACTACTGTGTCCTGTACAGCTCTGACTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 90 bp | ATTCCTGGCCCGGCTCACAATGAGCAACCCCTGGGCGCCTTGATCTaGAGCCAGCCAGCCCTTGGCATAGAAGCTACAGTTGCCACGCGT | + |
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Preference number: 6 (lower is better) Translates to: IPGPAHNEQPLGALI*SQPALGIEATVATR Trigger: ACGCGTGGCAACTGTAGCTTCTATGCCAAGGGCTGGCTGGCTCAAGATCAAGGCGCCCAGGGGTTGCTCATTGTGAGCCGGGCCAGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS TCA 72 bp | GCAGGAGCCATGCCCAATGGTCCTCATTTCGGTGGATaGCCCAGAGGACAGTCACCATGGCACACAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGAMPNGPHFGG*PRGQSPWHTGL Trigger: CAGGCCTGTGTGCCATGGTGACTGTCCTCTGGGTCATCCACCGAAATGAGGACCATTGGGCATGGCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS GCA 72 bp | TCTTCATCTGGACACCAGGGTGTCTTGGTGCCATCATaGAGGGACAGAAGTGGGGCATGGTGCAGGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSGHQGVLVPS*RDRSGAWCRSR Trigger: CCGGGACCTGCACCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CCA 72 bp | GTTGGATCAGTGGGATCAACATGGCCTCTAGGGCCATaGGGGAGCCAGAGGGTAGCTCATTGGGGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VGSVGSTWPLGP*GSQRVAHWGPG Trigger: ACCTGGACCCCAATGAGCTACCCTCTGGCTCCCCCATGGCCCTAGAGGCCATGTTGATCCCACTGATCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CCA 72 bp | AGGGGTGTGGGATTGGTTGGATCAGTGGGATCAACATaGCCTCTAGGGCCATGGGGGAGCCAGAGGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RGVGLVGSVGST*PLGPWGSQRVA Trigger: AGCTACCCTCTGGCTCCCCCATGGCCCTAGAGGCCATGTTGATCCCACTGATCCAACCAATCCCACACCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CAA 90 bp | TCCTGGGCCTGGTGGAAAGAGTCTTCATCTGGACACCAGGGTGTCTaGGTGCCATCATGCAGGGACAGAAGTGGGGCATGGTGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SWAWWKESSSGHQGV*VPSCRDRSGAWCRS Trigger: GGACCTGCACCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCACCAGGCCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 90 bp | CTGTTGATTCCTGGCCCGGCTCACAATGAGCAACCCCTGGGCGCCTaGATCTTGAGCCAGCCAGCCCTTGGCATAGAAGCTACAGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LLIPGPAHNEQPLGA*ILSQPALGIEATVA Trigger: GGCAACTGTAGCTTCTATGCCAAGGGCTGGCTGGCTCAAGATCAAGGCGCCCAGGGGTTGCTCATTGTGAGCCGGGCCAGGAATCAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS TCA 72 bp | TGTCTGAACACTGTTGATTCCTGGCCCGGCTCACAATaGGCAACCCCTGGGCGCCTTGATCTTGAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLNTVDSWPGSQ*ATPGRLDLEPA Trigger: GGCTGGCTCAAGATCAAGGCGCCCAGGGGTTGCTCATTGTGAGCCGGGCCAGGAATCAACAGTGTTCAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS TCA 72 bp | GGGTCCTGGGGCTTTGAGATGGTGTCTGAACACTGTTaGTTCCTGGCCCGGCTCACAATGAGCAACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSWGFEMVSEHC*FLARLTMSNPW Trigger: CCAGGGGTTGCTCATTGTGAGCCGGGCCAGGAATCAACAGTGTTCAGACACCATCTCAAAGCCCCAGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS TCA 72 bp | GGCCCTCTGGACTCGTGGCTTCATCCTCAGATAGGGTaGCCATCTCTGCCATATCGTCCCCAGTGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPLDSWLHPQIG*PSLPYRPQCCS Trigger: AGAGCAGCACTGGGGACGATATGGCAGAGATGGTCACCCTATCTGAGGATGAAGCCACGAGTCCAGAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS GCA 72 bp | GCAGTAGGCGACACCCAAAGTGTCCTGCAGGAGCCATaGCCAATGGTCCTCATTTCGGTGGATGACCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AVGDTQSVLQEP*PMVLISVDDPE Trigger: CTCTGGGTCATCCACCGAAATGAGGACCATTGGGCATGGCTCCTGCAGGACACTTTGGGTGTCGCCTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS GCA 72 bp | AGCCCTTTCTCTTGTGCAACCCCATCCAGGGCAGGCTaGTATCATGGACCCGAGATTGAGTGCGGATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPFSCATPSRAG*YHGPEIECGCG Trigger: GCCACATCCGCACTCAATCTCGGGTCCATGATAGCAGCCTGCCCTGGATGGGGTTGCACAAGAGAAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CCA 72 bp | GCGACACCCAAAGTGTCCTGCAGGAGCCATGCCCAATaGTCCTCATTTCGGTGGATGACCCAGAGGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: ATPKVSCRSHAQ*SSFRWMTQRTV Trigger: GACTGTCCTCTGGGTCATCCACCGAAATGAGGACCATTGGGCATGGCTCCTGCAGGACACTTTGGGTGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 90 bp | GGCTGGTTGCACAACGTCAAGGCGGAAAAGCTTAGCCGGGGCACCTaGAGCACCATTGGTAACCTCTCGTGGCTTGAAGAATCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GWLHNVKAEKLSRGT*STIGNLSWLEESAG Trigger: TCCAGCAGATTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAGCTTTTCCGCCTTGACGTTGTGCAACCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 90 bp | GGAGCCTGGGCTGACATACTCTTCTTCACCTTCAAGCCCTTTCTCTaGTGCAACCCCATCCAGGGCAGGCTGCTATCATGGACCCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GAWADILFFTFKPFL*CNPIQGRLLSWTRD Trigger: ATCTCGGGTCCATGATAGCAGCCTGCCCTGGATGGGGTTGCACAAGAGAAAGGGCTTGAAGGTGAAGAAGAGTATGTCAGCCCAGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS CCA 72 bp | AGCCGGGGCACCTTGAGCACCATTGGTAACCTCTCGTaGCTTGAAGAATCTGCTGGACCTGATGCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRGTLSTIGNLS*LEESAGPDATS Trigger: AGAAGTGGCATCAGGTCCAGCAGATTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 72 bp | TGGTGGAAAGAGTCTTCATCTGGACACCAGGGTGTCTaGGTGCCATCATGCAGGGACAGAAGTGGGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: WWKESSSGHQGV*VPSCRDRSGAW Trigger: CCATGCCCCACTTCTGTCCCTGCATGATGGCACCAAGACACCCTGGTGTCCAGATGAAGACTCTTTCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS GCA 72 bp | CACAGCGCCCGTCATGGCTGGTGTGAAATCCATAGGTaGATCTTCAAAGTCGTCATCTTCCCAGGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HSARHGWCEIHR*IFKVVIFPGPL Trigger: CAAAGGGCCTGGGAAGATGACGACTTTGAAGATGCACCTATGGATTTCACACCAGCCATGACGGGCGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CCA 72 bp | ACAACAATGTCCCCAAAGCCAAGGATGGAGAAGGGCTaGTTGCACAACGTCAAGGCGGAAAAGCTTAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TTMSPKPRMEKG*LHNVKAEKLSR Trigger: CCGGCTAAGCTTTTCCGCCTTGACGTTGTGCAACCAGCCCTTCTCCATCCTTGGCTTTGGGGACATTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 72 bp | CACAACGTCAAGGCGGAAAAGCTTAGCCGGGGCACCTaGAGCACCATTGGTAACCTCTCGTGGCTTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: HNVKAEKLSRGT*STIGNLSWLEE Trigger: TTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAGCTTTTCCGCCTTGACGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS TCA 72 bp | ACAACGTCAAGGCGGAAAAGCTTAGCCGGGGCACCTTaGGCACCATTGGTAACCTCTCGTGGCTTGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TTSRRKSLAGAP*APLVTSRGLKN Trigger: ATTCTTCAAGCCACGAGAGGTTACCAATGGTGCTCAAGGTGCCCCGGCTAAGCTTTTCCGCCTTGACGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 72 bp | GCTGACATACTCTTCTTCACCTTCAAGCCCTTTCTCTaGTGCAACCCCATCCAGGGCAGGCTGCTATCATGG | + |
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Preference number: 6 (lower is better) Translates to: ADILFFTFKPFL*CNPIQGRLLSW Trigger: CCATGATAGCAGCCTGCCCTGGATGGGGTTGCACAAGAGAAAGGGCTTGAAGGTGAAGAAGAGTATGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107000.2 |
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| CDS GCA 72 bp | AATCGCCATGTTATAGTCAGTAACAGGCTCGAGGGGTaGAAACATGGCTACTCGGACATCGGTGTCACCGTA | + |
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Preference number: 6 (lower is better) Translates to: NRHVIVSNRLEG*KHGYSDIGVTV Trigger: TACGGTGACACCGATGTCCGAGTAGCCATGTTTGCACCCCTCGAGCCTGTTACTGACTATAACATGGCGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 72 bp | AGGTGCATCTTCAAAGTCGTCATCTTCCCAGGCCCTTaGGGACCTCTCAGCTGCCACTGTTTGTTGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: RCIFKVVIFPGP*GPLSCHCLLLI Trigger: AATCAACAACAAACAGTGGCAGCTGAGAGGTCCCAAAGGGCCTGGGAAGATGACGACTTTGAAGATGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 90 bp | TCTGCTGGACCTGATGCCACTTCTACCATAATGCTCTCACCAGTCTaGGTGAACAGGGGAGTGATAAAGACAAAGAAGACATCGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAGPDATSTIMLSPV*VNRGVIKTKKTSKA Trigger: AGCCTTCGATGTCTTCTTTGTCTTTATCACTCCCCTGTTCACCAAGACTGGTGAGAGCATTATGGTAGAAGTGGCATCAGGTCCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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| CDS CAA 72 bp | CCTGATGCCACTTCTACCATAATGCTCTCACCAGTCTaGGTGAACAGGGGAGTGATAAAGACAAAGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: PDATSTIMLSPV*VNRGVIKTKKT Trigger: TGTCTTCTTTGTCTTTATCACTCCCCTGTTCACCAAGACTGGTGAGAGCATTATGGTAGAAGTGGCATCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059448.8 ENSMUST00000107000.2 |
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