Pregenerated sensors for SPPL2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035206Ensembl transcript IDs: ENSMUST00000035597.10, ENSMUST00000218789.2, ENSMUST00000219614.2, ENSMUST00000219951.2, ENSMUST00000220091.2
Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACCCTGGTGGGTGGCAGCTGTCCCTGTCCCCTGCAGGTCCCAGGTaGTCAGCATCTGTGTGGCGTGGAAGGCGGCGAGGGCCCAGCTCT | + |
Preference number: 1 (lower is better) Translates to: HPGGWQLSLSPAGPR*SASVWRGRRRGPSS Trigger: AGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGCTGCCACCCACCAGGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR TCA 90 bp | GGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATaGAGCTCACGGCCTGGTGCAAAGCAGAGCTGGGCGCGGGGTGCA | + |
Preference number: 1 (lower is better) Translates to: GRALWAAALHGVGSR*SSRPGAKQSWARGA Trigger: TGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | AGAGCAGGTCTGTCACCCTGGTGGGTGGCAGCTGTCCCTGTCCCCTaGAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGGCGGCG | + |
Preference number: 1 (lower is better) Translates to: RAGLSPWWVAAVPVP*RSQVVSICVAWKAA Trigger: CGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGCTGCCACCCACCAGGGTGACAGACCTGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | GTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTaGAAGGCGGCGAGGGCCCAGCTCTCACCCCTCTTCTTCCTAGGC | + |
Preference number: 1 (lower is better) Translates to: VPVPCRSQVVSICVA*KAARAQLSPLFFLG Trigger: GCCTAGGAAGAAGAGGGGTGAGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | CAGCTGTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTaGCGTGGAAGGCGGCGAGGGCCCAGCTCTCACCCCTCTTCTTCC | + |
Preference number: 1 (lower is better) Translates to: QLSLSPAGPRWSASV*RGRRRGPSSHPSSS Trigger: GGAAGAAGAGGGGTGAGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | TGCCCGTCCAGAAGGCACCCAGCTCCCGGCGCCACAGAGCCACGGTaGAGCTGGTCAGCAGTGTGCAAGGGACCAGGTAGAGTAGTGCAG | + |
Preference number: 1 (lower is better) Translates to: CPSRRHPAPGATEPR*SWSAVCKGPGRVVQ Trigger: CTGCACTACTCTACCTGGTCCCTTGCACACTGCTGACCAGCTGCACCGTGGCTCTGTGGCGCCGGGAGCTGGGTGCCTTCTGGACGGGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR GCA 90 bp | CCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTaGCTCGGTGACATGCAGCATGTGTGCTGGGCTCCCTGCAGGCAG | + |
Preference number: 1 (lower is better) Translates to: PWLPSSIPECGDCGL*LGDMQHVCWAPCRQ Trigger: CTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | GGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTaGTGCAAAGCAGAGCTGGGCGCGGGGTGCAGCTGGGAGAATCTA | + |
Preference number: 1 (lower is better) Translates to: GSGLAWSGQQMKLTA*CKAELGAGCSWENL Trigger: TAGATTCTCCCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | AAGCGAGGGACCCAGGCCAGGGGCTCAGTGGGAGCACAAGGAGGCTaGACTCAACTTGACCTGGTGGCCTTAGGGGGCTATCGCCGCACT | + |
Preference number: 1 (lower is better) Translates to: KRGTQARGSVGAQGG*TQLDLVALGGYRRT Trigger: AGTGCGGCGATAGCCCCCTAAGGCCACCAGGTCAAGTTGAGTCCAGCCTCCTTGTGCTCCCACTGAGCCCCTGGCCTGGGTCCCTCGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR CCA 90 bp | GGTTGTCAGGATCCTTGGCAGGGTCTGCGGCTCCGGCCTCCTCAGTaGACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAGGCTGCTCGG | + |
Preference number: 1 (lower is better) Translates to: GCQDPWQGLRLRPPQ*TGGSWLALHLEAAR Trigger: CCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAGCCGCAGACCCTGCCAAGGATCCTGACAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR TCA 90 bp | GGCTGGCCCTGGGCAGATCCCTGCCTATCCCAGCAGCTGCCTCTGTaGCACCAAGGAAGTCCCAGAGCACAGAGCCCCCTGGAAGACGTA | + |
Preference number: 1 (lower is better) Translates to: GWPWADPCLSQQLPL*HQGSPRAQSPLEDV Trigger: TACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTGTCACAGAGGCAGCTGCTGGGATAGGCAGGGATCTGCCCAGGGCCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | GCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTaGACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAG | + |
Preference number: 1 (lower is better) Translates to: AGDMDPSTRGQLPPG*TAQDLELEPFTGLE Trigger: CTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | GCTATCGCCGCACTCATAGCAAACTGGTATTCACCGCAAAACCGCTaGCCGTCCAGAAGGCACCCAGCTCCCGGCGCCACAGAGCCACGG | + |
Preference number: 1 (lower is better) Translates to: AIAALIANWYSPQNR*PSRRHPAPGATEPR Trigger: CCGTGGCTCTGTGGCGCCGGGAGCTGGGTGCCTTCTGGACGGGCAGCGGTTTTGCGGTGAATACCAGTTTGCTATGAGTGCGGCGATAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR GCA 90 bp | TCCTCAGTGGACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAGGCTaGTCGGAGAGGGAGGAACCCACAGCCTTCGGAGGCACAGGTCCC | + |
Preference number: 1 (lower is better) Translates to: SSVDRGLLASSSLGG*SEREEPTAFGGTGP Trigger: GGGACCTGTGCCTCCGAAGGCTGTGGGTTCCTCCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | TGGGACCAGTCAGAGCAGACCCCAACGGGGCAGAACCCACACAGGTaGAGGACACTTAGAGCAGGAGGCATTCAGCAACCACCCAGAGCC | + |
Preference number: 1 (lower is better) Translates to: WDQSEQTPTGQNPHR*RTLRAGGIQQPPRA Trigger: GGCTCTGGGTGGTTGCTGAATGCCTCCTGCTCTAAGTGTCCTGCACCTGTGTGGGTTCTGCCCCGTTGGGGTCTGCTCTGACTGGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | CCCACCAGGCTGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTaGCTTAGAGCAGTGGCCCACGCTCTCAACTCCATCTTGGCATGG | + |
Preference number: 1 (lower is better) Translates to: PTRLHSAGPGAGAIY*LRAVAHALNSILAW Trigger: CCATGCCAAGATGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAGCCTGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | TGTGGCCTCTGCCTCGGTGACATGCAGCATGTGTGCTGGGCTCCCTaGAGGCAGATCTGTCATGGAGTCCAGAGCCTGGTTGGTGAGGTA | + |
Preference number: 1 (lower is better) Translates to: CGLCLGDMQHVCWAP*RQICHGVQSLVGEV Trigger: TACCTCACCAACCAGGCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | GTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACATaGAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAG | + |
Preference number: 1 (lower is better) Translates to: VLSQSVGTVASASVT*SMCAGLPAGRSVME Trigger: CTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | ATCCTCTTCAGCTGCTACAGGGCGGTGGGGGTGGGGGCTCAGCAATaGGGCAGGAGTGTTCAAAGCCTTAGGTCACACCAGAGAGTTCCC | + |
Preference number: 1 (lower is better) Translates to: ILFSCYRAVGVGAQQ*GRSVQSLRSHQRVP Trigger: GGGAACTCTCTGGTGTGACCTAAGGCTTTGAACACTCCTGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGTAGCAGCTGAAGAGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 90 bp | TCAGCACCCAGGGCAGCAAGTGCTCTCCATCTCACGCCTCCCCAGTaGTCCTCTGAGCAATCCCACTCATCAGTGAAATCCTGTGGGGAG | + |
Preference number: 1 (lower is better) Translates to: SAPRAASALHLTPPQ*SSEQSHSSVKSCGE Trigger: CTCCCCACAGGATTTCACTGATGAGTGGGATTGCTCAGAGGAGCACTGGGGAGGCGTGAGATGGAGAGCACTTGCTGCCCTGGGTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | TCAATGTACCCTCCATCCTCTTCAGCTGCTACAGGGCGGTGGGGGTaGGGGCTCAGCAATGCGGCAGGAGTGTTCAAAGCCTTAGGTCAC | + |
Preference number: 1 (lower is better) Translates to: SMYPPSSSAATGRWG*GLSNAAGVFKALGH Trigger: GTGACCTAAGGCTTTGAACACTCCTGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGTAGCAGCTGAAGAGGATGGAGGGTACATTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | AGCCCTTCAATGTACCCTCCATCCTCTTCAGCTGCTACAGGGCGGTaGGGGTGGGGGCTCAGCAATGCGGCAGGAGTGTTCAAAGCCTTA | + |
Preference number: 1 (lower is better) Translates to: SPSMYPPSSSAATGR*GWGLSNAAGVFKAL Trigger: TAAGGCTTTGAACACTCCTGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGTAGCAGCTGAAGAGGATGGAGGGTACATTGAAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | AGCTGCCTCTGTGACACCAAGGAAGTCCCAGAGCACAGAGCCCCCTaGAAGACGTACCCAAGAAGCAAGGCTCATCTTGGGGAGCCACGT | + |
Preference number: 1 (lower is better) Translates to: SCLCDTKEVPEHRAP*KTYPRSKAHLGEPR Trigger: ACGTGGCTCCCCAAGATGAGCCTTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTGTCACAGAGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 90 bp | GACTACCCAAGAGGTGAAAGGACTGCTTGGACACCCAATATAAAATaGCTTGTCAAATCCAATGGCAGAAGCAGGTGGCTAGGCCCCAGC | + |
Preference number: 1 (lower is better) Translates to: DYPRGERTAWTPNIK*LVKSNGRSRWLGPS Trigger: GCTGGGGCCTAGCCACCTGCTTCTGCCATTGGATTTGACAAGCCATTTTATATTGGGTGTCCAAGCAGTCCTTTCACCTCTTGGGTAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGGGTGCAAAGCAGAGCTaGGCGCGGGGTGCAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: EHRPSTVGSGLAWSGQQMGAKQS*ARGAAG Trigger: CCCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACC...CATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GAGGCATTCAGCAACCACCCAGAGCCAGAAACGCCCAGCCCCCACCACCCAGCGACAGGGCGGTGGGGGTaGGGGCTCAGCAATGCGGCA | + |
Preference number: 2 (lower is better) Translates to: EAFSNHPEPETPSPHHPATGRWG*GLSNAA Trigger: TGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGT...CGCTGGGTGGTGGGGGCTGGGCGTTTCTGGCTCTGGGTGGTTGCTGAATGCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TGTGGAGGGAGGCGCGGCCGTAGGAGCATCTGCAGGGTGAGCATCGGCCGAGCATCCGTGAGCACAGGCTaGCCCTGGGCAGATCCCTGC | + |
Preference number: 2 (lower is better) Translates to: CGGRRGRRSICRVSIGRASVSTG*PWADPC Trigger: GCAGGGATCTGCCCAGGGCCAGCCTGTGCTCACGGA...TGCTCGGCCGATGCTCACCCTGCAGATGCTCCTACGGCCGCGCCTCCCTCCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | GGACTGGCCACAGGGTTGTCAGGATCCTTGGCAGGGTCTGCGGCTCCGGCCTCCGGAGTGGGCAGCAGATaGAGCTCACGGCCTGGTGCA | + |
Preference number: 2 (lower is better) Translates to: GLATGLSGSLAGSAAPASGVGSR*SSRPGA Trigger: TGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCC...GGAGGCCGGAGCCGCAGACCCTGCCAAGGATCCTGACAACCCTGTGGCCAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCGGTGCAAAGCAGAGCTaGGCGCGGGGTGCAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: QRPCMEWAADEAHGLVQSGAKQS*ARGAAG Trigger: CCCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACC...GCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CAA 90 bp | CTCCGGCCTCCTCAGTGGACAGGGGGCTCTTGGCTAGCTCTTCACTaGGAGGCTGCTCGGAGAGGGAGGAACCCACAGCCTTCGGAGGCA | + |
Preference number: 2 (lower is better) Translates to: LRPPQWTGGSWLALH*EAARRGRNPQPSEA Trigger: TGCCTCCGAAGGCTGTGGGTTCCTCCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GAGCACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCGGTCTGTCACCCTGGTaGGTGGCAGCTGTCCCTGTC | + |
Preference number: 2 (lower is better) Translates to: EHCGQRPCMEWAADEAHGGLSPW*VAAVPV Trigger: GACAGGGACAGCTGCCACCCACCAGGGTGACAGACC...GCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | ACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGGCAGGTCTGTCACCCTaGTGGGTGGCAGCTGTCCCT | + |
Preference number: 2 (lower is better) Translates to: TVGSGLAWSGQQMKLTAWAGLSP*WVAAVP Trigger: AGGGACAGCTGCCACCCACCAGGGTGACAGACCTGC...CCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TGGACTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGTTGTTGGGGTTGCTCTaGCCCCAGAGCCCAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: WTCWGHGPIHTWPAPTRLLLGLL*PQSPAL Trigger: CAGGGCTGGGCTCTGGGGCCAGAGCAACCCCAACAA...CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCGGACCCATCCACACGTaGCCAGCTCCCACCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: QRPCMEWAADEAHGLVQSGPIHT*PAPTRL Trigger: CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCC...GCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACAGGACCCATCCACACGTaGCCAGCTCCCACCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: GSRVLSQSVGTVASASVTGPIHT*PAPTRL Trigger: CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCC...TGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CTGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCACAGGGCGGTGGGGGTaGGGGCTCAGCAATGCGGCA | + |
Preference number: 2 (lower is better) Translates to: LHSAGPGAGAIYWLRAVATGRWG*GLSNAA Trigger: TGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGT...GGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTGGGGAGCACAGGCTGGCCCTaGGCAGATCCCTGCCTATCC | + |
Preference number: 2 (lower is better) Translates to: PTDRPLEAAPNIGTCLLGSTGWP*ADPCLS Trigger: GGATAGGCAGGGATCTGCCCAGGGCCAGCCTGTGCT...CCCCAACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTGGGGCTCCGGCCTCCTCAGTaGACAGGGGGCTCTTGGCTA | + |
Preference number: 2 (lower is better) Translates to: PTDRPLEAAPNIGTCLLGLRPPQ*TGGSWL Trigger: TAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAG...CCCCAACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | CAGAGCCCCCTGGAAGACGTACCCAAGAAGCAAGGCTCATCTTGGGGAGCCACGGGAGTGGGCAGCAGATaGAGCTCACGGCCTGGTGCA | + |
Preference number: 2 (lower is better) Translates to: QSPLEDVPKKQGSSWGATGVGSR*SSRPGA Trigger: TGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCC...CGTGGCTCCCCAAGATGAGCCTTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | CCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTGAGTCCAAGCCGTCCGTaGGCACAGGCTGGCCCTGGG | + |
Preference number: 2 (lower is better) Translates to: PAVPACHPAADTLSHASVSPSRP*AQAGPG Trigger: CCCAGGGCCAGCCTGTGCTCACGGACGGCTTGGACT...CACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | CTGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCGCCACAGAGCCACGGTaGAGCTGGTCAGCAGTGTGC | + |
Preference number: 2 (lower is better) Translates to: LHSAGPGAGAIYWLRAVAATEPR*SWSAVC Trigger: GCACACTGCTGACCAGCTGCACCGTGGCTCTGTGGC...GGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | CCACCCAGGGCTATGCAGCTTCATCCAGGCCCAACACCACTCAGCACCCAGGGCGTGGGGGCTCAGCAATaGGGCAGGAGTGTTCAAAGC | + |
Preference number: 2 (lower is better) Translates to: PPRAMQLHPGPTPLSTQGVGAQQ*GRSVQS Trigger: GCTTTGAACACTCCTGCCGCATTGCTGAGCCCCCAC...GCCCTGGGTGCTGAGTGGTGTTGGGCCTGGATGAAGCTGCATAGCCCTGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GGCACCCACTGTCTGTGGTGGGCACTCCCCATCCCCTCACAGCCCTTCAATGTATGGTCAGCATCTGTGTaGCGTGGAAGGCGGCGAGGG | + |
Preference number: 2 (lower is better) Translates to: GTHCLWWALPIPSQPFNVWSASV*RGRRRG Trigger: CCCTCGCCGCCTTCCACGCCACACAGATGCTGACCA...TACATTGAAGGGCTGTGAGGGGATGGGGAGTGCCCACCACAGACAGTGGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GTGACACCAAGGAAGTCCCAGAGCACAGAGCCCCCTGGAAGACGTACCCAAGAAGGTGCAAAGCAGAGCTaGGCGCGGGGTGCAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: VTPRKSQSTEPPGRRTQEGAKQS*ARGAAG Trigger: CCCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACC...TTCTTGGGTACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GGCACCCACTGTCTGTGGTGGGCACTCCCCATCCCCTCACAGCCCTTCAATGTATTGTTGGGGTTGCTCTaGCCCCAGAGCCCAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: GTHCLWWALPIPSQPFNVLLGLL*PQSPAL Trigger: CAGGGCTGGGCTCTGGGGCCAGAGCAACCCCAACAA...TACATTGAAGGGCTGTGAGGGGATGGGGAGTGCCCACCACAGACAGTGGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTCTGTCTCCTGAAGGGGTTTaGGCCCCGCGGGCAGAGTGC | + |
Preference number: 2 (lower is better) Translates to: SRSHCWGRGQCPGRLACLSPEGV*APRAEC Trigger: GCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGA...CAGACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTCTGAGCTGATGGGACCCATCCACACGTaGCCAGCTCCCACCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: PLLGQRAVSWKTCMSELMGPIHT*PAPTRL Trigger: CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCC...CATCAGCTCAGACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GCTGTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGATGCAGCATGTGTGCTaGGCTCCCTGCAGGCAGATC | + |
Preference number: 2 (lower is better) Translates to: AVPVPCRSQVVSICVAWKMQHVC*APCRQI Trigger: GATCTGCCTGCAGGGAGCCCAGCACACATGCTGCAT...CTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTGCTGCTACAGGGCGGTaGGGGTGGGGGCTCAGCAAT | + |
Preference number: 2 (lower is better) Translates to: QSRSHCWGRGQCPGRLACAATGR*GWGLSN Trigger: ATTGCTGAGCCCCCACCCCCACCGCCCTGTAGCAGC...ACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CTCCGGCCTCCTCAGTGGACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAGGCTACCCACTGTCTGTGGTaGGCACTCCCCATCCCCTCA | + |
Preference number: 2 (lower is better) Translates to: LRPPQWTGGSWLALHLEATHCLW*ALPIPS Trigger: TGAGGGGATGGGGAGTGCCCACCACAGACAGTGGGT...AGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCTGGGCGCGGGGTGCAGCTGCTAGGCCGAAGTCTCTaGCTTCACCACAGGGATAGG | + |
Preference number: 2 (lower is better) Translates to: ADEAHGLVQSRAGRGVQLLGRSL*LHHRDR Trigger: CCTATCCCTGTGGTGAAGCCAGAGACTTCGGCCTAG...CAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | GGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACACTGGGAGAATCTACTTaGGGCCTCAGAGGCCTGAGC | + |
Preference number: 2 (lower is better) Translates to: GSRVLSQSVGTVASASVTLGEST*GLRGLS Trigger: GCTCAGGCCTCTGAGGCCTCAAGTAGATTCTCCCAG...TGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | GTGGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGGGAGTGGGCAGCAGATaGAGCTCACGGCCTGGTGCA | + |
Preference number: 2 (lower is better) Translates to: VAHALNSILAWTLLKGFGGVGSR*SSRPGA Trigger: TGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCC...CCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | TTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGTGGCCTCTGCCTCGGTaGCATGCAGCATGTGTGCTG | + |
Preference number: 2 (lower is better) Translates to: FPCKCGWPWLPSSIPECGWPLPR*HAACVL Trigger: CAGCACACATGCTGCATGTCACCGAGGCAGAGGCCA...CCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | CTGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCTGGCCTCTGCCTCGGTaGCATGCAGCATGTGTGCTG | + |
Preference number: 2 (lower is better) Translates to: LHSAGPGAGAIYWLRAVAWPLPR*HAACVL Trigger: CAGCACACATGCTGCATGTCACCGAGGCAGAGGCCA...GGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | AGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTCGCTGGCCACGCTGCATaGGGACAAGAGCCACGAAGG | + |
Preference number: 2 (lower is better) Translates to: SPEATAGAEGSVLEDLHVAGHAA*GQEPRR Trigger: CCTTCGTGGCTCTTGTCCTCATGCAGCGTGGCCAGC...GACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CATGCAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGTGGTCAGCATCTGTGTaGCGTGGAAGGCGGCGAGGG | + |
Preference number: 2 (lower is better) Translates to: HAACVLGSLQADLSWSPEWSASV*RGRRRG Trigger: CCCTCGCCGCCTTCCACGCCACACAGATGCTGACCA...CTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCCGGCCTTGCATGGAGTaGGCAGCAGATGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: QRPCMEWAADEAHGLVQSRPCME*AADEAH Trigger: GTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCG...GCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGGGCAGCGGCCTTGCATaGAGTGGGCAGCAGATGAAG | + |
Preference number: 2 (lower is better) Translates to: PVQKPLLGQRAVSWKTCMGSGLA*SGQQMK Trigger: CTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCC...CATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCGGCAGCGGCCTTGCATaGAGTGGGCAGCAGATGAAG | + |
Preference number: 2 (lower is better) Translates to: GPRSQLHLGMDSPEGVWAGSGLA*SGQQMK Trigger: CTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCC...GGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACAGCACAGCGCAGGACCTaGAGCTGGAGCCATTTACTG | + |
Preference number: 2 (lower is better) Translates to: GSRVLSQSVGTVASASVTAQRRT*SWSHLL Trigger: CAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGC...TGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGAGCACAGGCTGGCCCTaGGCAGATCCCTGCCTATCC | + |
Preference number: 2 (lower is better) Translates to: FPMQVWVAVAPEFYPRVWSTGWP*ADPCLS Trigger: GGATAGGCAGGGATCTGCCCAGGGCCAGCCTGTGCT...CCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GCCAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATATGAAGCTCACGGCCTaGTGCAAAGCAGAGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: ASPEATAGAEGSVLEDLHMKLTA*CKAELG Trigger: GCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCAT...ATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | AGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGCCTGGATGAAGCTCACGGCCTaGTGCAAAGCAGAGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: SMCAGLPAGRSVMESRAWMKLTA*CKAELG Trigger: GCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCAT...CCAGGCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GTGCCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTGCGGCCTTGCATGGAGTaGGCAGCAGATGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: VPTDRPLEAAPNIGTCLLRPCME*AADEAH Trigger: GTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCG...CAACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCGCACAGCGCAGGACCTaGAGCTGGAGCCATTTACTG | + |
Preference number: 2 (lower is better) Translates to: CTAQDLELEPFTGLEQWPAQRRT*SWSHLL Trigger: CAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGC...GGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | AAGCAGAGCTGGGCGCGGGGTGCAGCTGGGAGAATCTACTTGAGGCCTCAGAGGTTCTATCCCAGAGTGTaGGGACTGTGGCCTCTGCCT | + |
Preference number: 2 (lower is better) Translates to: KQSWARGAAGRIYLRPQRFYPRV*GLWPLP Trigger: AGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAA...CCTCTGAGGCCTCAAGTAGATTCTCCCAGCTGCACCCCGCGCCCAGCTCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | ATGCAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGCGAGCCACGGTGCAGCTaGTCAGCAGTGTGCAAGGGA | + |
Preference number: 2 (lower is better) Translates to: MQHVCWAPCRQICHGVQSEPRCS*SAVCKG Trigger: TCCCTTGCACACTGCTGACCAGCTGCACCGTGGCTC...GCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | CTGGTTGGTGAGGTAGAGGACAGATGCCAGTCCAGAAGCCACTGCTGGGGCAGACTGGGAGAATCTACTTaGGGCCTCAGAGGCCTGAGC | + |
Preference number: 2 (lower is better) Translates to: LVGEVEDRCQSRSHCWGRLGEST*GLRGLS Trigger: GCTCAGGCCTCTGAGGCCTCAAGTAGATTCTCCCAG...TCTGCCCCAGCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTCACCAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | AGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGCCTGGGAGGTAGAGGACAGATaGCAGTCCAGAAGCCACTGC | + |
Preference number: 2 (lower is better) Translates to: SMCAGLPAGRSVMESRAWEVEDR*QSRSHC Trigger: GCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTC...CCAGGCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | ACCCTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGTGCTGGGCTCCCTaGAGGCAGATCTGTCATGGA | + |
Preference number: 2 (lower is better) Translates to: TLSHASVGGRGSRVLSQSVCWAP*RQICHG Trigger: TCCATGACAGATCTGCCTGCAGGGAGCCCAGCACAC...ACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTTCCAGAAGCCACTGCTaGGGCAGAGGGCAGTGTCCT | + |
Preference number: 2 (lower is better) Translates to: PSCPCLSSCSRHPFPCKCSRSHC*GRGQCP Trigger: AGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGA...ACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGATGCAGCATGTGTGCTaGGCTCCCTGCAGGCAGATC | + |
Preference number: 2 (lower is better) Translates to: FPMQVWVAVAPEFYPRVWMQHVC*APCRQI Trigger: GATCTGCCTGCAGGGAGCCCAGCACACATGCTGCAT...CCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR TCA 90 bp | CCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTGCAGCAGCTGCCTCTGTaGCACCAAGGAAGTCCCAGA | + |
Preference number: 2 (lower is better) Translates to: PAVPACHPAADTLSHASVQQLPL*HQGSPR Trigger: TCTGGGACTTCCTTGGTGTCACAGAGGCAGCTGCTG...CACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | ACCCTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGAGGTAGAGGACAGATaGCAGTCCAGAAGCCACTGC | + |
Preference number: 2 (lower is better) Translates to: TLSHASVGGRGSRVLSQSEVEDR*QSRSHC Trigger: GCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTC...ACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | GTGGCCTTAGGGGGCTATCGCCGCACTCATAGCAAACTGGTATTCACCGCAAAAGGTCTGTCACCCTGGTaGGTGGCAGCTGTCCCTGTC | + |
Preference number: 2 (lower is better) Translates to: VALGGYRRTHSKLVFTAKGLSPW*VAAVPV Trigger: GACAGGGACAGCTGCCACCCACCAGGGTGACAGACC...TTTTGCGGTGAATACCAGTTTGCTATGAGTGCGGCGATAGCCCCCTAAGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCACGCTCTCAACTCCACGGCCTTGCATGGAGTaGGCAGCAGATGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: LELEPFTGLEQWPTLSTPRPCME*AADEAH Trigger: GTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCG...TGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTTTCTATCCCAGAGTGTaGGGACTGTGGCCTCTGCCT | + |
Preference number: 2 (lower is better) Translates to: PSCPCLSSCSRHPFPCKCFYPRV*GLWPLP Trigger: AGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAA...ACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGCACATCTAACTATCCATTCTaGTTAGACAGGGTGCCTAGG | + |
Preference number: 2 (lower is better) Translates to: LAGDMDPSTRGQLPPGCTSNYPF*LDRVPR Trigger: CCTAGGCACCCTGTCTAACCAGAATGGATAGTTAGA...TGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCTGGGCGCGGGGTGCAGCTGGGGTGAAAGGACTGCTTaGACACCCAATATAAAATGG | + |
Preference number: 2 (lower is better) Translates to: QMKLTAWCKAELGAGCSWGERTA*TPNIKW Trigger: CCATTTTATATTGGGTGTCCAAGCAGTCCTTTCACC...CCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR GCA 90 bp | ACCCTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGTCCTGGAAGACTTaGATGTCTGAGCTGATGGAC | + |
Preference number: 2 (lower is better) Translates to: TLSHASVGGRGSRVLSQSVSWKT*MSELMD Trigger: GTCCATCAGCTCAGACATGCAAGTCTTCCAGGACAC...ACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCTGCACTCATAGCAAACTaGTATTCACCGCAAAACCGC | + |
Preference number: 2 (lower is better) Translates to: PCMEWAADEAHGLVQSRAALIAN*YSPQNR Trigger: GCGGTTTTGCGGTGAATACCAGTTTGCTATGAGTGC...AGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | CTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGTCTAACTATCCATTCTaGTTAGACAGGGTGCCTAGG | + |
Preference number: 2 (lower is better) Translates to: LSHASVGGRGSRVLSQSVSNYPF*LDRVPR Trigger: CCTAGGCACCCTGTCTAACCAGAATGGATAGTTAGA...CACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | AGAGCAGTGGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGGGTGAAAGGACTGCTTaGACACCCAATATAAAATGG | + |
Preference number: 2 (lower is better) Translates to: RAVAHALNSILAWTLLKGGERTA*TPNIKW Trigger: CCATTTTATATTGGGTGTCCAAGCAGTCCTTTCACC...CCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCACTGCTCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CCA 90 bp | TTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGACACCCAATATAAAATaGCTTGTCAAATCCAATGGC | + |
Preference number: 2 (lower is better) Translates to: FPCKCGWPWLPSSIPECGTPNIK*LVKSNG Trigger: GCCATTGGATTTGACAAGCCATTTTATATTGGGTGT...CCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR TCA 72 bp | GTGGAGGGAGGCGCGGCCGTAGGAGCATCTGCAGGGTaGGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGC | + |
Preference number: 3 (lower is better) Translates to: VEGGAAVGASAG*ASAEHCGQRPC Trigger: GCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCTCCTACGGCCGCGCCTCCCTCCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | CTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTaGCGTGGAAGGCGGCGAGGGCCCAGCTCTCACCCC | + |
Preference number: 3 (lower is better) Translates to: LSPAGPRWSASV*RGRRRGPSSHP Trigger: GGGGTGAGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR-3UTR CAA 90 bp | TGTGGAGGGAGGCGCGGCCGTAGGAGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGGCAGCGGCCTaGCATGGAGTGGGCAGCAGA | + |
Preference number: 3 (lower is better) Translates to: CGGRRGRRSICRVSIGRALWAAA*HGVGSR Trigger: TCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAG...TGCTCGGCCGATGCTCACCCTGCAGATGCTCCTACGGCCGCGCCTCCCTCCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | CCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTaGAAGGCGGCGAGGGCCCAGCTCTCACCCCTCTTC | + |
Preference number: 3 (lower is better) Translates to: PCRSQVVSICVA*KAARAQLSPLF Trigger: GAAGAGGGGTGAGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | GAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATaGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGC | + |
Preference number: 3 (lower is better) Translates to: EHRPSTVGSGLA*SGQQMKLTAWC Trigger: GCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | CTGCGGCTCCGGCCTCCTCAGTGGACAGGGGGCTCTTaGCTAGCTCTTCACTTGGAGGCTGCTCGGAGAGGG | + |
Preference number: 3 (lower is better) Translates to: LRLRPPQWTGGS*LALHLEAARRG Trigger: CCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAGCCGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR TCA 72 bp | CTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATaGAGCTCACGGCCTGGTGCAAAGCAGAGCTGGGCG | + |
Preference number: 3 (lower is better) Translates to: LWAAALHGVGSR*SSRPGAKQSWA Trigger: CGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | CTCACGGCCTGGTGCAAAGCAGAGCTGGGCGCGGGGTaGAGCTGGGAGAATCTACTTGAGGCCTCAGAGGCC | + |
Preference number: 3 (lower is better) Translates to: LTAWCKAELGAG*SWENLLEASEA Trigger: GGCCTCTGAGGCCTCAAGTAGATTCTCCCAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | GGCGCCACAGAGCCACGGTGCAGCTGGTCAGCAGTGTaGAAGGGACCAGGTAGAGTAGTGCAGGCTGGCCAC | + |
Preference number: 3 (lower is better) Translates to: GATEPRCSWSAV*KGPGRVVQAGH Trigger: GTGGCCAGCCTGCACTACTCTACCTGGTCCCTTGCACACTGCTGACCAGCTGCACCGTGGCTCTGTGGCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | ACTGGCCACAGGGTTGTCAGGATCCTTGGCAGGGTCTaGGGCTCCGGCCTCCTCAGTGGACAGGGGGCTCTT | + |
Preference number: 3 (lower is better) Translates to: TGHRVVRILGRV*GSGLLSGQGAL Trigger: AAGAGCCCCCTGTCCACTGAGGAGGCCGGAGCCGCAGACCCTGCCAAGGATCCTGACAACCCTGTGGCCAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | TCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGTaGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGC | + |
Preference number: 3 (lower is better) Translates to: SAEHCGQRPCME*AADEAHGLVQS Trigger: GCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | CAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTaGGCCCCGCGGGCAGAGTGCCCACAGACAGGCCCC | + |
Preference number: 3 (lower is better) Translates to: QLHLGMDSPEGV*APRAECPQTGP Trigger: GGGGCCTGTCTGTGGGCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | GACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAGGCTaGTCGGAGAGGGAGGAACCCACAGCCTTCGGAGGC | + |
Preference number: 3 (lower is better) Translates to: DRGLLASSSLGG*SEREEPTAFGG Trigger: GCCTCCGAAGGCTGTGGGTTCCTCCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | GATCCTTGGCAGGGTCTGCGGCTCCGGCCTCCTCAGTaGACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAG | + |
Preference number: 3 (lower is better) Translates to: DPWQGLRLRPPQ*TGGSWLALHLE Trigger: CTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAGCCGCAGACCCTGCCAAGGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR-3UTR CAA 90 bp | TCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTCTGCTGTGGGCAGCGGCCTaGCATGGAGTGGGCAGCAGA | + |
Preference number: 3 (lower is better) Translates to: SRSHCWGRGQCPGRLACLLWAAA*HGVGSR Trigger: TCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAG...CAGACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR TCA 72 bp | GGGCTCAGTGGGAGCACAAGGAGGCTGGACTCAACTTaGCCTGGTGGCCTTAGGGGGCTATCGCCGCACTCA | + |
Preference number: 3 (lower is better) Translates to: GLSGSTRRLDST*PGGLRGLSPHS Trigger: TGAGTGCGGCGATAGCCCCCTAAGGCCACCAGGTCAAGTTGAGTCCAGCCTCCTTGTGCTCCCACTGAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
||
3UTR TCA 72 bp | TGGGCAGATCCCTGCCTATCCCAGCAGCTGCCTCTGTaGCACCAAGGAAGTCCCAGAGCACAGAGCCCCCTG | + |
Preference number: 3 (lower is better) Translates to: WADPCLSQQLPL*HQGSPRAQSPL Trigger: CAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTGTCACAGAGGCAGCTGCTGGGATAGGCAGGGATCTGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | ATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTaGACAGCGCAGGACCTGGAGCTGGAGCCATTTACT | + |
Preference number: 3 (lower is better) Translates to: MDPSTRGQLPPG*TAQDLELEPFT Trigger: AGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | CAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACATaGAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCT | + |
Preference number: 3 (lower is better) Translates to: QSVGTVASASVT*SMCAGLPAGRS Trigger: AGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | CCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTaGCTCGGTGACATGCAGCATGTGTGCTGGGCTCCC | + |
Preference number: 3 (lower is better) Translates to: PSSIPECGDCGL*LGDMQHVCWAP Trigger: GGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR GCA 72 bp | GCTGGCCCTGGGCAGATCCCTGCCTATCCCAGCAGCTaGCTCTGTGACACCAAGGAAGTCCCAGAGCACAGA | + |
Preference number: 3 (lower is better) Translates to: AGPGQIPAYPSS*LCDTKEVPEHR Trigger: TCTGTGCTCTGGGACTTCCTTGGTGTCACAGAGGCAGCTGCTGGGATAGGCAGGGATCTGCCCAGGGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | ACCCAGGCCAGGGGCTCAGTGGGAGCACAAGGAGGCTaGACTCAACTTGACCTGGTGGCCTTAGGGGGCTAT | + |
Preference number: 3 (lower is better) Translates to: TQARGSVGAQGG*TQLDLVALGGY Trigger: ATAGCCCCCTAAGGCCACCAGGTCAAGTTGAGTCCAGCCTCCTTGTGCTCCCACTGAGCCCCTGGCCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | ATGTACCCTCCATCCTCTTCAGCTGCTACAGGGCGGTaGGGGTGGGGGCTCAGCAATGCGGCAGGAGTGTTC | + |
Preference number: 3 (lower is better) Translates to: MYPPSSSAATGR*GWGLSNAAGVF Trigger: GAACACTCCTGCCGCATTGCTGAGCCCCCACCCCCACCGCCCTGTAGCAGCTGAAGAGGATGGAGGGTACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | GTACCCAAGAAGCAAGGCTCATCTTGGGGAGCCACGTaGCACCCACTGTCTGTGGTGGGCACTCCCCATCCC | + |
Preference number: 3 (lower is better) Translates to: VPKKQGSSWGAT*HPLSVVGTPHP Trigger: GGGATGGGGAGTGCCCACCACAGACAGTGGGTGCCACGTGGCTCCCCAAGATGAGCCTTGCTTCTTGGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | CCCCTGGAAGACGTACCCAAGAAGCAAGGCTCATCTTaGGGAGCCACGTGGCACCCACTGTCTGTGGTGGGC | + |
Preference number: 3 (lower is better) Translates to: PLEDVPKKQGSS*GATWHPLSVVG Trigger: GCCCACCACAGACAGTGGGTGCCACGTGGCTCCCCAAGATGAGCCTTGCTTCTTGGGTACGTCTTCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | GACTGTGGCCTCTGCCTCGGTGACATGCAGCATGTGTaGTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTC | + |
Preference number: 3 (lower is better) Translates to: DCGLCLGDMQHV*WAPCRQICHGV Trigger: GACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | GCACTCATAGCAAACTGGTATTCACCGCAAAACCGCTaGCCGTCCAGAAGGCACCCAGCTCCCGGCGCCACA | + |
Preference number: 3 (lower is better) Translates to: ALIANWYSPQNR*PSRRHPAPGAT Trigger: TGTGGCGCCGGGAGCTGGGTGCCTTCTGGACGGGCAGCGGTTTTGCGGTGAATACCAGTTTGCTATGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | TGTGGCCTCTGCCTCGGTGACATGCAGCATGTGTGCTaGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAG | + |
Preference number: 3 (lower is better) Translates to: CGLCLGDMQHVC*APCRQICHGVQ Trigger: CTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCAGAGGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | GGCACCCACTGTCTGTGGTGGGCACTCCCCATCCCCTCACAGCCCTTCAATGTAGCTGGGAGAATCTACTaGAGGCCTCAGAGGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: GTHCLWWALPIPSQPFNVAGRIY*RPQRPE Trigger: CTCAGGCCTCTGAGGCCTCAAGTAGATTCTCCCAGC...TACATTGAAGGGCTGTGAGGGGATGGGGAGTGCCCACCACAGACAGTGGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | CTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGCACAGCTCTCAACTCCATCTaGGCATGGACTCTCCTGAAG | + |
Preference number: 3 (lower is better) Translates to: LAGDMDPSTRGQLPPGCTALNSI*AWTLLK Trigger: CTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGC...TGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | CCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTGGGACTGGCCACAGGGTaGTCAGGATCCTTGGCAGGG | + |
Preference number: 3 (lower is better) Translates to: PAVPACHPAADTLSHASVGLATG*SGSLAG Trigger: CCCTGCCAAGGATCCTGACAACCCTGTGGCCAGTCC...CACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR TCA 72 bp | AGAGAGTTCCCCACAGGGAACCAGAAAGCTCAAGCATaGCCTTCCAGAAGCGAGGGACCCAGGCCAGGGGCT | + |
Preference number: 3 (lower is better) Translates to: REFPTGNQKAQA*PSRSEGPRPGA Trigger: AGCCCCTGGCCTGGGTCCCTCGCTTCTGGAAGGTCATGCTTGAGCTTTCTGGTTCCCTGTGGGGAACTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | CCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTaGATGTCTGAGCTGATGGACTTGCTGGGGACATGG | + |
Preference number: 3 (lower is better) Translates to: PLLGQRAVSWKT*MSELMDLLGTW Trigger: CCATGTCCCCAGCAAGTCCATCAGCTCAGACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | GGTGAGGTAGAGGACAGATGCCAGTCCAGAAGCCACTaGTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCA | + |
Preference number: 3 (lower is better) Translates to: GEVEDRCQSRSH*WGRGQCPGRLA Trigger: TGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | TGCCTCGGTGACATGCAGCATGTGTGCTGGGCTCCCTaGAGGCAGATCTGTCATGGAGTCCAGAGCCTGGTT | + |
Preference number: 3 (lower is better) Translates to: CLGDMQHVCWAP*RQICHGVQSLV Trigger: AACCAGGCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATGTCACCGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | CTGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTaGCTTAGAGCAGTGGCCCACGCTCTCAACTCCATC | + |
Preference number: 3 (lower is better) Translates to: LHSAGPGAGAIY*LRAVAHALNSI Trigger: GATGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | ACTTGCATGTCTGAGCTGATGGACTTGCTGGGGACATaGACCCATCCACACGTGGCCAGCTCCCACCAGGCT | + |
Preference number: 3 (lower is better) Translates to: TCMSELMDLLGT*THPHVASSHQA Trigger: AGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAGTCCATCAGCTCAGACATGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | AGCAGACACCCTTTCCCATGCAAGTGTGGGTGGCCGTaGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGT | + |
Preference number: 3 (lower is better) Translates to: SRHPFPCKCGWP*LPSSIPECGDC Trigger: ACAGTCCCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGTGTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | GTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTaGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTG | + |
Preference number: 3 (lower is better) Translates to: VILQQTPFPMQV*VAVAPEFYPRV Trigger: CACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | CAGCTCTCACCCCTCTTCTTCCTAGGCCGAAGTCTCTaGCTTCACCACAGGGATAGGCTGAGCCTCATCCCC | + |
Preference number: 3 (lower is better) Translates to: QLSPLFFLGRSL*LHHRDRLSLIP Trigger: GGGGATGAGGCTCAGCCTATCCCTGTGGTGAAGCCAGAGACTTCGGCCTAGGAAGAAGAGGGGTGAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | ATGCAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGCGCTGGGAGAATCTACTaGAGGCCTCAGAGGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: MQHVCWAPCRQICHGVQSAGRIY*RPQRPE Trigger: CTCAGGCCTCTGAGGCCTCAAGTAGATTCTCCCAGC...GCTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | TGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCAACATAGGAACCTGCTaGTTGGGGTTGCTCTGGCCC | + |
Preference number: 3 (lower is better) Translates to: CTAQDLELEPFTGLEQWPNIGTC*LGLLWP Trigger: GGGCCAGAGCAACCCCAACAAGCAGGTTCCTATGTT...GGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | TCAGAGCAGACCCCAACGGGGCAGAACCCACACAGGTaGAGGACACTTAGAGCAGGAGGCATTCAGCAACCA | + |
Preference number: 3 (lower is better) Translates to: SEQTPTGQNPHR*RTLRAGGIQQP Trigger: TGGTTGCTGAATGCCTCCTGCTCTAAGTGTCCTGCACCTGTGTGGGTTCTGCCCCGTTGGGGTCTGCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | GAGGTAGAGGACAGATGCCAGTCCAGAAGCCACTGCTaGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGT | + |
Preference number: 3 (lower is better) Translates to: EVEDRCQSRSHC*GRGQCPGRLAC Trigger: ACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR-3UTR CAA 90 bp | CTGGTTGGTGAGGTAGAGGACAGATGCCAGTCCAGAAGCCACTGCTGGGGCAGAGCTCTCAACTCCATCTaGGCATGGACTCTCCTGAAG | + |
Preference number: 3 (lower is better) Translates to: LVGEVEDRCQSRSHCWGRALNSI*AWTLLK Trigger: CTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGC...TCTGCCCCAGCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTCACCAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR GCA 72 bp | AGGGCAGCAAGTGCTCTCCATCTCACGCCTCCCCAGTaGTCCTCTGAGCAATCCCACTCATCAGTGAAATCC | + |
Preference number: 3 (lower is better) Translates to: RAASALHLTPPQ*SSEQSHSSVKS Trigger: GGATTTCACTGATGAGTGGGATTGCTCAGAGGAGCACTGGGGAGGCGTGAGATGGAGAGCACTTGCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | GACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTaGCCCACGCTCTCAACTCCATCTTGGCATGGACTC | + |
Preference number: 3 (lower is better) Translates to: DLELEPFTGLEQ*PTLSTPSWHGL Trigger: GAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR CCA 72 bp | TGTGACACCAAGGAAGTCCCAGAGCACAGAGCCCCCTaGAAGACGTACCCAAGAAGCAAGGCTCATCTTGGG | + |
Preference number: 3 (lower is better) Translates to: CDTKEVPEHRAP*KTYPRSKAHLG Trigger: CCCAAGATGAGCCTTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTGTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
||
3UTR-3UTR CAA 90 bp | CACCAAGGAAGTCCCAGAGCACAGAGCCCCCTGGAAGACGTACCCAAGAAGCAAGCTCTCAACTCCATCTaGGCATGGACTCTCCTGAAG | + |
Preference number: 3 (lower is better) Translates to: HQGSPRAQSPLEDVPKKQALNSI*AWTLLK Trigger: CTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGC...TTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR TCA 72 bp | CGGGACCTCGCGGAGCACCTCCGACTACCCAAGAGGTaGAAGGACTGCTTGGACACCCAATATAAAATGGCT | + |
Preference number: 3 (lower is better) Translates to: RDLAEHLRLPKR*KDCLDTQYKMA Trigger: AGCCATTTTATATTGGGTGTCCAAGCAGTCCTTTCACCTCTTGGGTAGTCGGAGGTGCTCCGCGAGGTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | ATAAAATGGCTTGTCAAATCCAATGGCAGAAGCAGGTaGCTAGGCCCCAGCGCTCCTCTAACTATCCATTCT | + |
Preference number: 3 (lower is better) Translates to: IKWLVKSNGRSR*LGPSAPLTIHS Trigger: AGAATGGATAGTTAGAGGAGCGCTGGGGCCTAGCCACCTGCTTCTGCCATTGGATTTGACAAGCCATTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CCA 72 bp | AGCACCTCCGACTACCCAAGAGGTGAAAGGACTGCTTaGACACCCAATATAAAATGGCTTGTCAAATCCAAT | + |
Preference number: 3 (lower is better) Translates to: STSDYPRGERTA*TPNIKWLVKSN Trigger: ATTGGATTTGACAAGCCATTTTATATTGGGTGTCCAAGCAGTCCTTTCACCTCTTGGGTAGTCGGAGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GGGAGGCGCGGCCGTAGGAGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGCTCCGGCCTCCTCAGTaGACAGGGGGCTCTTGGCTA | + |
Preference number: 4 (lower is better) Translates to: GRRGRRSICRVSIGRALWLRPPQ*TGGSWL Trigger: TAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAG...CCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCTCCTACGGCCGCGCCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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3UTR CAA 72 bp | GGGCTGAGGGGACTGGCCACAGGGTTGTCAGGATCCTaGGCAGGGTCTGCGGCTCCGGCCTCCTCAGTGGAC | + |
Preference number: 4 (lower is better) Translates to: GLRGLATGLSGS*AGSAAPASSVD Trigger: GTCCACTGAGGAGGCCGGAGCCGCAGACCCTGCCAAGGATCCTGACAACCCTGTGGCCAGTCCCCTCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GCTGTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGCCCAGTAGCCACCGATaGCGACGGTGCCCACGGCCA | + |
Preference number: 4 (lower is better) Translates to: AVPVPCRSQVVSICVAWKPSSHR*RRCPRP Trigger: TGGCCGTGGGCACCGTCGCCATCGGTGGCTACTGGG...CTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | GGGAGGCGCGGCCGTAGGAGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGCAAACACGCAGATCATaGCTGGCGTCACGTCCACCG | + |
Preference number: 4 (lower is better) Translates to: GRRGRRSICRVSIGRALWQTRRS*LASRPP Trigger: CGGTGGACGTGACGCCAGTCATGATCTGCGTGTTTG...CCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCTCCTACGGCCGCGCCTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | CGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGCGGGGACCCTGCACGTaGAGAAGGGCAGCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: RGSRVLSQSVGTVASASVRGPCT*RRAASA Trigger: TGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCG...CACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | CCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGGCGGCGAGGGCCCAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGC | + |
Preference number: 4 (lower is better) Translates to: PAGPRWSASVWRGRRRGPSDTEE*QQQHAG Trigger: GCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACT...GGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCGGAGGCACAGGTCCCTaGGTTGCGGCCCACGGGGTC | + |
Preference number: 4 (lower is better) Translates to: GPRSQLHLGMDSPEGVWAGGTGP*VAAHGV Trigger: GACCCCGTGGGCCGCAACCCAGGGACCTGTGCCTCC...GGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR TCA 90 bp | GGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGACTATCAGCAGCCCGTaGGCCCCACTGCCCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: GLAWSGQQMKLTAWCKAETISSP*APLPWA Trigger: GGCCCAGGGCAGTGGGGCTCACGGGCTGCTGATAGT...CTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR TCA 90 bp | TCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCCGCGGGCAGAGTGCCGCTGGCCACGCTGCATaGGGACAAGAGCCACGAAGG | + |
Preference number: 4 (lower is better) Translates to: SILAWTLLKGFGPRGQSAAGHAA*GQEPRR Trigger: CCTTCGTGGCTCTTGTCCTCATGCAGCGTGGCCAGC...GGCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR GCA 90 bp | ACCCTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGCCCGTGAGCCCCACTaGCCTGGGCCAGCCGCACTT | + |
Preference number: 4 (lower is better) Translates to: TLSHASVGGRGSRVLSQSAREPH*PGPAAL Trigger: AAGTGCGGCTGGCCCAGGGCAGTGGGGCTCACGGGC...ACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | GTGCCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTGCCCAGTAGCCACCGATaGCGACGGTGCCCACGGCCA | + |
Preference number: 4 (lower is better) Translates to: VPTDRPLEAAPNIGTCLLPSSHR*RRCPRP Trigger: TGGCCGTGGGCACCGTCGCCATCGGTGGCTACTGGG...CAACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GAGCACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCAGCATGCGGGCCTGTaGGCGCTTGTGGAAGTACGG | + |
Preference number: 4 (lower is better) Translates to: EHCGQRPCMEWAADEAHGQHAGL*ALVEVR Trigger: CCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTG...GCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | TGGACTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGCAGCATGCGGGCCTGTaGGCGCTTGTGGAAGTACGG | + |
Preference number: 4 (lower is better) Translates to: WTCWGHGPIHTWPAPTRLQHAGL*ALVEVR Trigger: CCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTG...CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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3UTR CAA 72 bp | CAGAGCTGGGCGCGGGGTGCAGCTGGGAGAATCTACTaGAGGCCTCAGAGGCCTGAGCACCATGTTAGGGGG | + |
Preference number: 4 (lower is better) Translates to: QSWARGAAGRIY*RPQRPEHHVRG Trigger: CCCCCTAACATGGTGCTCAGGCCTCTGAGGCCTCAAGTAGATTCTCCCAGCTGCACCCCGCGCCCAGCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | GGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCGGGGACCCTGCACGTaGAGAAGGGCAGCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: GPRSQLHLGMDSPEGVWARGPCT*RRAASA Trigger: TGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCG...GGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | ATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGCGGGGACCCTGCACGTaGAGAAGGGCAGCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: MQVWVAVAPEFYPRVWGLRGPCT*RRAASA Trigger: TGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCG...CAGTCCCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | AGCTGTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGCCACAGAGCCACGGTaGAGCTGGTCAGCAGTGTGC | + |
Preference number: 4 (lower is better) Translates to: SCPCPLQVPGGQHLCGVEATEPR*SWSAVC Trigger: GCACACTGCTGACCAGCTGCACCGTGGCTCTGTGGC...TTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | CTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGCACACACGCAGATCATGACTaGCGTCACGTCCACCGCCTC | + |
Preference number: 4 (lower is better) Translates to: LAGDMDPSTRGQLPPGCTHADHD*RHVHRL Trigger: GAGGCGGTGGACGTGACGCCAGTCATGATCTGCGTG...TGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGCAGCTTCTCATGGGTaGATGAGTTCGAGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: SICRVSIGRALWAAALHGAASHG*MSSRAR Trigger: CCGGGCCCTCGAACTCATCCACCCATGAGAAGCTGC...TCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | TGGACTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGGAGCCACGGTGCAGCTaGTCAGCAGTGTGCAAGGGA | + |
Preference number: 4 (lower is better) Translates to: WTCWGHGPIHTWPAPTRLEPRCS*SAVCKG Trigger: TCCCTTGCACACTGCTGACCAGCTGCACCGTGGCTC...CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | GGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAAGGCGGCGAGGGCCCAGCTCTCTAGGCCGAAGTCTCTaGCTTCACCACAGGGATAGG | + |
Preference number: 4 (lower is better) Translates to: GPRWSASVWRGRRRGPSSLGRSL*LHHRDR Trigger: CCTATCCCTGTGGTGAAGCCAGAGACTTCGGCCTAG...AGAGCTGGGCCCTCGCCGCCTTCCACGCCACACAGATGCTGACCACCTGGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR TCA 90 bp | CCACTCAGCACCCAGGGCAGCAAGTGCTCTCCATCTCACGCCTCCCCAGTGCTCTGGCCACCTCCACCATaGTGCTGTTGCCACTCTTGG | + |
Preference number: 4 (lower is better) Translates to: PLSTQGSKCSPSHASPVLWPPPP*CCCHSW Trigger: CCAAGAGTGGCAACAGCATCATGGTGGAGGTGGCCA...GAGCACTGGGGAGGCGTGAGATGGAGAGCACTTGCTGCCCTGGGTGCTGAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | AGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGATCTTCACTTGGAGGCTaGTCGGAGAGGGAGGAACCC | + |
Preference number: 4 (lower is better) Translates to: SICRVSIGRALWAAALHGSSLGG*SEREEP Trigger: GGGTTCCTCCCTCTCCGAGCAGCCTCCAAGTGAAGA...TCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | GCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCTGGGCGCGGGGTGCAGCTGCGAGTCCTACTGGTTTaGGACACCACTCGAAGCACG | + |
Preference number: 4 (lower is better) Translates to: ADEAHGLVQSRAGRGVQLRVLLV*DTTRST Trigger: CGTGCTTCGAGTGGTGTCCCAAACCAGTAGGACTCG...CAGCTGCACCCCGCGCCCAGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | CTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCACGCTCTCAACTCCACCCAGTAGCCACCGATaGCGACGGTGCCCACGGCCA | + |
Preference number: 4 (lower is better) Translates to: LELEPFTGLEQWPTLSTPPSSHR*RRCPRP Trigger: TGGCCGTGGGCACCGTCGCCATCGGTGGCTACTGGG...TGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGCACCTTCAGCACCATaGGCAGCTTCTCATGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SICRVSIGRALWAAALHGAPSAP*AASHGW Trigger: CCACCCATGAGAAGCTGCCCATGGTGCTGAAGGTGC...TCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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3UTR CAA 72 bp | CCTCAGTGGACAGGGGGCTCTTGGCTAGCTCTTCACTaGGAGGCTGCTCGGAGAGGGAGGAACCCACAGCCT | + |
Preference number: 4 (lower is better) Translates to: PQWTGGSWLALH*EAARRGRNPQP Trigger: AGGCTGTGGGTTCCTCCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | TGGACTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGGTGGGTTGTAGAGGATaGAGTAGTCCCTGCTCCGAG | + |
Preference number: 4 (lower is better) Translates to: WTCWGHGPIHTWPAPTRLVGCRG*SSPCSE Trigger: CTCGGAGCAGGGACTACTGCATCCTCTACAACCCAC...CAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR GCA 90 bp | CTTGCTGGGGACATGGACCCATCCACACGTGGCCAGCTCCCACCAGGCTGCACAACAGGCAGAAGGCAATaGCCAGGGTGTCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: LAGDMDPSTRGQLPPGCTTGRRQ*PGCLAG Trigger: TCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGT...TGTGCAGCCTGGTGGGAGCTGGCCACGTGTGGATGGGTCCATGTCCCCAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCACGCAGATCATGACTaGCGTCACGTCCACCGCCTC | + |
Preference number: 4 (lower is better) Translates to: GLAWSGQQMKLTAWCKAEHADHD*RHVHRL Trigger: GAGGCGGTGGACGTGACGCCAGTCATGATCTGCGTG...CTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CAGCGGCCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCAGCTGTAGAGACCGGTaGAGGAGGCCAGGCAGAAGA | + |
Preference number: 4 (lower is better) Translates to: QRPCMEWAADEAHGLVQSSCRDR*RRPGRR Trigger: TCTTCTGCCTGGCCTCCTCCACCGGTCTCTACAGCT...GCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGGCCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | TTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGGCAGCTTCTCATGGGTaGATGAGTTCGAGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: FPCKCGWPWLPSSIPECGAASHG*MSSRAR Trigger: CCGGGCCCTCGAACTCATCCACCCATGAGAAGCTGC...CCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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3UTR CAA 72 bp | TGGCTTAGAGCAGTGGCCCACGCTCTCAACTCCATCTaGGCATGGACTCTCCTGAAGGGGTTTGGGCCCCGC | + |
Preference number: 4 (lower is better) Translates to: WLRAVAHALNSI*AWTLLKGFGPR Trigger: GCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | CCAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTGGCCACCTCCACCATaGTGCTGTTGCCACTCTTGG | + |
Preference number: 4 (lower is better) Translates to: PVQKPLLGQRAVSWKTCMWPPPP*CCCHSW Trigger: CCAAGAGTGGCAACAGCATCATGGTGGAGGTGGCCA...CATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | GTGCCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTGAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGC | + |
Preference number: 4 (lower is better) Translates to: VPTDRPLEAAPNIGTCLLSDTEE*QQQHAG Trigger: GCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACT...CAACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | GGCAGAACCCACACAGGTGCAGGACACTTAGAGCAGGAGGCATTCAGCAACCACGCCACAGAGCCACGGTaGAGCTGGTCAGCAGTGTGC | + |
Preference number: 4 (lower is better) Translates to: GRTHTGAGHLEQEAFSNHATEPR*SWSAVC Trigger: GCACACTGCTGACCAGCTGCACCGTGGCTCTGTGGC...GTGGTTGCTGAATGCCTCCTGCTCTAAGTGTCCTGCACCTGTGTGGGTTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | TCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCCGCGGGCAGAGTGCCCAAGTGGGCCCACTGTaGGTTGTAGAGGATGCAGTA | + |
Preference number: 4 (lower is better) Translates to: SILAWTLLKGFGPRGQSAQVGPL*VVEDAV Trigger: TACTGCATCCTCTACAACCCACAGTGGGCCCACTTG...GGCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | CAGAGCCCCCTGGAAGACGTACCCAAGAAGCAAGGCTCATCTTGGGGAGCCACGAGCTGTAGAGACCGGTaGAGGAGGCCAGGCAGAAGA | + |
Preference number: 4 (lower is better) Translates to: QSPLEDVPKKQGSSWGATSCRDR*RRPGRR Trigger: TCTTCTGCCTGGCCTCCTCCACCGGTCTCTACAGCT...CGTGGCTCCCCAAGATGAGCCTTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CCCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTCAGCATGCGGGCCTGTaGGCGCTTGTGGAAGTACGG | + |
Preference number: 4 (lower is better) Translates to: PSCPCLSSCSRHPFPCKCQHAGL*ALVEVR Trigger: CCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTG...ACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GGTGGGCACTCCCCATCCCCTCACAGCCCTTCAATGTACCCTCCATCCTCTTCAGCGAGGTGTTCAGCCTaGGCACCTTCAGCACCATGG | + |
Preference number: 4 (lower is better) Translates to: GGHSPSPHSPSMYPPSSSARCSA*APSAPW Trigger: CCATGGTGCTGAAGGTGCCCAGGCTGAACACCTCGC...TGAAGAGGATGGAGGGTACATTGAAGGGCTGTGAGGGGATGGGGAGTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | CAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTGTCACACAGGGAGAGTaGCGAGGTGTTCAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: QSRSHCWGRGQCPGRLACVTQGE*RGVQPG Trigger: CCCAGGCTGAACACCTCGCCACTCTCCCTGTGTGAC...ACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | GGTGGGCACTCCCCATCCCCTCACAGCCCTTCAATGTACCCTCCATCCTCTTCAGAGCCACGGTGCAGCTaGTCAGCAGTGTGCAAGGGA | + |
Preference number: 4 (lower is better) Translates to: GGHSPSPHSPSMYPPSSSEPRCS*SAVCKG Trigger: TCCCTTGCACACTGCTGACCAGCTGCACCGTGGCTC...TGAAGAGGATGGAGGGTACATTGAAGGGCTGTGAGGGGATGGGGAGTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218789.2 |
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3UTR CAA 72 bp | CCCAGAGCTCTAGGAGGACCACCCAGCTGTCCCTGCTaGTCATCCTGCAGCAGACACCCTTTCCCATGCAAG | + |
Preference number: 4 (lower is better) Translates to: PRALGGPPSCPC*SSCSRHPFPCK Trigger: CTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGGTGGTCCTCCTAGAGCTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | TTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGCGCCTGAAGATGTCTTaGAGGTCTCTGTGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: FPCKCGWPWLPSSIPECGRLKMS*RSLWLS Trigger: GCTGAGCCACAGAGACCTTCAAGACATCTTCAGGCG...CCCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR TCA 90 bp | GGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCGCCTGAAGATGTCTTaGAGGTCTCTGTGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: GPRSQLHLGMDSPEGVWARLKMS*RSLWLS Trigger: GCTGAGCCACAGAGACCTTCAAGACATCTTCAGGCG...GGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR TCA 90 bp | CCTTGCATGGAGTGGGCAGCAGATGAAGCTCACGGCCTGGTGCAAAGCAGAGCTTGGCCACCTCCACCATaGTGCTGTTGCCACTCTTGG | + |
Preference number: 4 (lower is better) Translates to: PCMEWAADEAHGLVQSRAWPPPP*CCCHSW Trigger: CCAAGAGTGGCAACAGCATCATGGTGGAGGTGGCCA...AGCTCTGCTTTGCACCAGGCCGTGAGCTTCATCTGCTGCCCACTCCATGCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | ACCCTTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTAGCTGTAGAGACCGGTaGAGGAGGCCAGGCAGAAGA | + |
Preference number: 4 (lower is better) Translates to: TLSHASVGGRGSRVLSQSSCRDR*RRPGRR Trigger: TCTTCTGCCTGGCCTCCTCCACCGGTCTCTACAGCT...ACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | TCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGTCTGGCACCTTCAGCACCATaGGCAGCTTCTCATGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SRSHCWGRGQCPGRLACLAPSAP*AASHGW Trigger: CCACCCATGAGAAGCTGCCCATGGTGCTGAAGGTGC...CAGACATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | CCCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTGCGAGGTGTTCAGCCTaGGCACCTTCAGCACCATGG | + |
Preference number: 4 (lower is better) Translates to: PSCPCLSSCSRHPFPCKCARCSA*APSAPW Trigger: CCATGGTGCTGAAGGTGCCCAGGCTGAACACCTCGC...ACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR CCA 90 bp | CTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCACGCTCTCAACTCCAGTCACACAGGGAGAGTaGCGAGGTGTTCAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: LELEPFTGLEQWPTLSTPVTQGE*RGVQPG Trigger: CCCAGGCTGAACACCTCGCCACTCTCCCTGTGTGAC...TGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 |
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CDS-3UTR GCA 90 bp | CACCAAGGAAGTCCCAGAGCACAGAGCCCCCTGGAAGACGTACCCAAGAAGCAAAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGC | + |
Preference number: 4 (lower is better) Translates to: HQGSPRAQSPLEDVPKKQSDTEE*QQQHAG Trigger: GCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACT...TTGCTTCTTGGGTACGTCTTCCAGGGGGCTCTGTGCTCTGGGACTTCCTTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | TTTCCCATGCAAGTGTGGGTGGCCGTGGCTCCCGAGTTCTATCCCAGAGTGTGGACAGGCAGAAGGCAATaGCCAGGGTGTCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: FPMQVWVAVAPEFYPRVWTGRRQ*PGCLAG Trigger: TCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGT...CCACACTCTGGGATAGAACTCGGGAGCCACGGCCACCCACACTTGCATGGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | AGTGCCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTACAGGCAGAAGGCAATaGCCAGGGTGTCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: SAHRQAPRGCSQHRNLLVTGRRQ*PGCLAG Trigger: TCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGT...AACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CTGGTTGGTGAGGTAGAGGACAGATGCCAGTCCAGAAGCCACTGCTGGGGCAGATTTGCTGAGGTCATGTaGCAAGTGGGCCCACTGTGG | + |
Preference number: 4 (lower is better) Translates to: LVGEVEDRCQSRSHCWGRFAEVM*QVGPLW Trigger: CCACAGTGGGCCCACTTGCCACATGACCTCAGCAAA...TCTGCCCCAGCAGTGGCTTCTGGACTGGCATCTGTCCTCTACCTCACCAACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | CCACTCAGCACCCAGGGCAGCAAGTGCTCTCCATCTCACGCCTCCCCAGTGCTCCCAGGCCATAGGCAATaGTACAGGCCACAAAGTAAA | + |
Preference number: 4 (lower is better) Translates to: PLSTQGSKCSPSHASPVLPGHRQ*YRPQSK Trigger: TTTACTTTGTGGCCTGTACCATTGCCTATGGCCTGG...GAGCACTGGGGAGGCGTGAGATGGAGAGCACTTGCTGCCCTGGGTGCTGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CGTGGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGCCAGGCCATAGGCAATaGTACAGGCCACAAAGTAAA | + |
Preference number: 4 (lower is better) Translates to: RGSRVLSQSVGTVASASVPGHRQ*YRPQSK Trigger: TTTACTTTGTGGCCTGTACCATTGCCTATGGCCTGG...CACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | CCCAGCTGTCCCTGCTTGTCATCCTGCAGCAGACACCCTTTCCCATGCAAGTGTGGAGAGACACTTTGCTaGGGTCATGTGGCAAGTGGG | + |
Preference number: 4 (lower is better) Translates to: PSCPCLSSCSRHPFPCKCGETLC*GHVASG Trigger: CCCACTTGCCACATGACCTCAGCAAAGTGTCTCTCC...ACACTTGCATGGGAAAGGGTGTCTGCTGCAGGATGACAAGCAGGGACAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | GTGGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGTGTCTTGTTGCCTCCTaGAGGGACCAGCTTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: VAHALNSILAWTLLKGFGCLVAS*RDQLLL Trigger: AAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGACA...CCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CCA 90 bp | GTGGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGGTTGTAGTCCATCACTaGCTCGCTCGGAGCATACAG | + |
Preference number: 4 (lower is better) Translates to: VAHALNSILAWTLLKGFGVVVHH*LARSIQ Trigger: CTGTATGCTCCGAGCGAGCCAGTGATGGACTACAAC...CCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | AGCAATGCGGCAGGAGTGTTCAAAGCCTTAGGTCACACCAGAGAGTTCCCCACACACGCAGATCATGACTaGCGTCACGTCCACCGCCTC | + |
Preference number: 4 (lower is better) Translates to: SNAAGVFKALGHTREFPTHADHD*RHVHRL Trigger: GAGGCGGTGGACGTGACGCCAGTCATGATCTGCGTG...TGTGGGGAACTCTCTGGTGTGACCTAAGGCTTTGAACACTCCTGCCGCATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | GAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGAGTGGGCAGCAGATGCCACAAAGTAAATTCTaGAGGACTGCACCTGGATAT | + |
Preference number: 4 (lower is better) Translates to: EHRPSTVGSGLAWSGQQMPQSKF*RTAPGY Trigger: ATATCCAGGTGCAGTCCTCCAGAATTTACTTTGTGG...CATCTGCTGCCCACTCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CCAGTCCAGAAGCCACTGCTGGGGCAGAGGGCAGTGTCCTGGAAGACTTGCATGCCAGGCCATAGGCAATaGTACAGGCCACAAAGTAAA | + |
Preference number: 4 (lower is better) Translates to: PVQKPLLGQRAVSWKTCMPGHRQ*YRPQSK Trigger: TTTACTTTGTGGCCTGTACCATTGCCTATGGCCTGG...CATGCAAGTCTTCCAGGACACTGCCCTCTGCCCCAGCAGTGGCTTCTGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | AAGCAGAGCTGGGCGCGGGGTGCAGCTGGGAGAATCTACTTGAGGCCTCAGAGGAGAGAAGCACAAGCATaGAGCAGCACATTACAACAA | + |
Preference number: 4 (lower is better) Translates to: KQSWARGAAGRIYLRPQRREAQA*SSTLQQ Trigger: TTGTTGTAATGTGCTGCTTCATGCTTGTGCTTCTCT...CCTCTGAGGCCTCAAGTAGATTCTCCCAGCTGCACCCCGCGCCCAGCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR GCA 90 bp | CCCAACATAGGAACCTGCTTGTTGGGGTTGCTCTGGCCCCAGAGCCCAGCCCTGCCATCGTCTCGCTTATaGTTCATGTACCTTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: PNIGTCLLGLLWPQSPALPSSRL*FMYLFF Trigger: GAAGAAAAGGTACATGAAGCATAAGCGAGACGATGG...CAGGGCTGGGCTCTGGGGCCAGAGCAACCCCAACAAGCAGGTTCCTATGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | CTCCGGCCTCCTCAGTGGACAGGGGGCTCTTGGCTAGCTCTTCACTTGGAGGCTCCACAAAGTAAATTCTaGAGGACTGCACCTGGATAT | + |
Preference number: 4 (lower is better) Translates to: LRPPQWTGGSWLALHLEAPQSKF*RTAPGY Trigger: ATATCCAGGTGCAGTCCTCCAGAATTTACTTTGTGG...AGCCTCCAAGTGAAGAGCTAGCCAAGAGCCCCCTGTCCACTGAGGAGGCCGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CCA 90 bp | TGCACAGCGCAGGACCTGGAGCTGGAGCCATTTACTGGCTTAGAGCAGTGGCCCCCACAAAGTAAATTCTaGAGGACTGCACCTGGATAT | + |
Preference number: 4 (lower is better) Translates to: CTAQDLELEPFTGLEQWPPQSKF*RTAPGY Trigger: ATATCCAGGTGCAGTCCTCCAGAATTTACTTTGTGG...GGGCCACTGCTCTAAGCCAGTAAATGGCTCCAGCTCCAGGTCCTGCGCTGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | AGTGCCCACAGACAGGCCCCTCGAGGCTGCTCCCAACATAGGAACCTGCTTGTTAGAGAAGCACAAGCATaGAGCAGCACATTACAACAA | + |
Preference number: 4 (lower is better) Translates to: SAHRQAPRGCSQHRNLLVREAQA*SSTLQQ Trigger: TTGTTGTAATGTGCTGCTTCATGCTTGTGCTTCTCT...AACAAGCAGGTTCCTATGTTGGGAGCAGCCTCGAGGGGCCTGTCTGTGGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR TCA 90 bp | TACTGGCTTAGAGCAGTGGCCCACGCTCTCAACTCCATCTTGGCATGGACTCTCAGAGAAGCACAAGCATaGAGCAGCACATTACAACAA | + |
Preference number: 4 (lower is better) Translates to: YWLRAVAHALNSILAWTLREAQA*SSTLQQ Trigger: TTGTTGTAATGTGCTGCTTCATGCTTGTGCTTCTCT...GAGAGTCCATGCCAAGATGGAGTTGAGAGCGTGGGCCACTGCTCTAAGCCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 90 bp | GGGTTGCGGCCCACGGGGTCTGAGGTGCATCCTTCGCAAAACCGCTaGCCGTCCAGAAGGCACCCAGCTCCCGGCGCCACAGAGCCACGG | + |
Preference number: 5 (lower is better) Translates to: GLRPTGSEVHPSQNR*PSRRHPAPGATEPR Trigger: CCGTGGCTCTGTGGCGCCGGGAGCTGGGTGCCTTCTGGACGGGCAGCGGTTTTGCGAAGGATGCACCTCAGACCCCGTGGGCCGCAACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 90 bp | CTGGTTTGGGACACCACTCGAAGCACGCCGAACTCACAGGCCACCTaGGCCGCGAGTAGCAGCAAAGCTGCGGCCAGCCGCGCCGCGGCC | + |
Preference number: 5 (lower is better) Translates to: LVWDTTRSTPNSQAT*AASSSKAAASRAAA Trigger: GGCCGCGGCGCGGCTGGCCGCAGCTTTGCTGCTACTCGCGGCCCAGGTGGCCTGTGAGTTCGGCGTGCTTCGAGTGGTGTCCCAAACCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS TCA 90 bp | ACAGCCTTCGGAGGCACAGGTCCCTGGGTTGCGGCCCACGGGGTCTaGGGTGCATCCTTCGCAAAACCGCTGCCCGTCCAGAAGGCACCC | + |
Preference number: 5 (lower is better) Translates to: TAFGGTGPWVAAHGV*GASFAKPLPVQKAP Trigger: GGGTGCCTTCTGGACGGGCAGCGGTTTTGCGAAGGATGCACCTCAGACCCCGTGGGCCGCAACCCAGGGACCTGTGCCTCCGAAGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 90 bp | CTTCGGAGGCACAGGTCCCTGGGTTGCGGCCCACGGGGTCTGAGGTaGATCCTTCGCAAAACCGCTGCCCGTCCAGAAGGCACCCAGCTC | + |
Preference number: 5 (lower is better) Translates to: LRRHRSLGCGPRGLR*ILRKTAARPEGTQL Trigger: GAGCTGGGTGCCTTCTGGACGGGCAGCGGTTTTGCGAAGGATGCACCTCAGACCCCGTGGGCCGCAACCCAGGGACCTGTGCCTCCGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 90 bp | GTGACACAGAAGAGTGCCAGCAGCAGCATGCGGGCCTGTGGGCGCTaGACGTGCAGAAGGGCAGCTTCCGCACAAAGGGTGCCAGACAGC | + |
Preference number: 5 (lower is better) Translates to: VTQKSASSSMRACGR*TCRRAASAQRVPDS Trigger: GCTGTCTGGCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219951.2 |
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CDS CCA 90 bp | GGAGACAGTGACACAGAAGAGTGCCAGCAGCAGCATGCGGGCCTGTaGGCGCTGCACGTGCAGAAGGGCAGCTTCCGCACAAAGGGTGCC | + |
Preference number: 5 (lower is better) Translates to: GDSDTEECQQQHAGL*ALHVQKGSFRTKGA Trigger: GGCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACTGTCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219951.2 |
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CDS GCA 90 bp | CCTGTGGGCGCTTGTGGAAGTACGGCAGGTTGTTGTCGGGGACCCTaGACGTGCAGAAGGGCAGCTTCCGCACAAAGGGTGCCAGACAGC | + |
Preference number: 5 (lower is better) Translates to: PVGACGSTAGCCRGP*TCRRAASAQRVPDS Trigger: GCTGTCTGGCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS CCA 90 bp | ACAGGGAGAGTGGCGAGGTGTTCAGCCTGGGCACCTTCAGCACCATaGGCAGCTTCTCATGGGTGGATGAGTTCGAGGGCCCGGTGGCCA | + |
Preference number: 5 (lower is better) Translates to: TGRVARCSAWAPSAP*AASHGWMSSRARWP Trigger: TGGCCACCGGGCCCTCGAACTCATCCACCCATGAGAAGCTGCCCATGGTGCTGAAGGTGCCCAGGCTGAACACCTCGCCACTCTCCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219951.2 |
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CDS-3UTR CAA 90 bp | AGCATCTGCAGGGTGAGCATCGGCCGAGCACTGTGGGCAGCGGCCTTGCATGGATGGCTAGCTCTTCACTaGGAGGCTGCTCGGAGAGGG | + |
Preference number: 5 (lower is better) Translates to: SICRVSIGRALWAAALHGWLALH*EAARRG Trigger: CCCTCTCCGAGCAGCCTCCAAGTGAAGAGCTAGCCA...TCCATGCAAGGCCGCTGCCCACAGTGCTCGGCCGATGCTCACCCTGCAGATGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS TCA 90 bp | CATACTGTGTCTTGTTGCCTCCTGGAGGGACCAGCTTCTCCTTGCTaGCTATCAGCAGCCCGTGAGCCCCACTGCCCTGGGCCAGCCGCA | + |
Preference number: 5 (lower is better) Translates to: HTVSCCLLEGPASPC*LSAAREPHCPGPAA Trigger: TGCGGCTGGCCCAGGGCAGTGGGGCTCACGGGCTGCTGATAGTCAGCAAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGACACAGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS TCA 90 bp | GTGTGCAAGGGACCAGGTAGAGTAGTGCAGGCTGGCCACGCTGCATaGGGACAAGAGCCACGAAGGTCACCAGGAGGCCCAGGCCATAGG | + |
Preference number: 5 (lower is better) Translates to: VCKGPGRVVQAGHAA*GQEPRRSPGGPGHR Trigger: CCTATGGCCTGGGCCTCCTGGTGACCTTCGTGGCTCTTGTCCTCATGCAGCGTGGCCAGCCTGCACTACTCTACCTGGTCCCTTGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219951.2 |
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CDS CCA 90 bp | ACACAGAAGAGTGCCAGCAGCAGCATGCGGGCCTGTGGGCGCTTGTaGAAGTACGGCAGGTTGTTGTCGGGGACCCTGCACGTGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: TQKSASSSMRACGRL*KYGRLLSGTLHVQK Trigger: CTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 90 bp | GGCGCTTGTGGAAGTACGGCAGGTTGTTGTCGGGGACCCTGCACGTaGAGAAGGGCAGCTTCCGCACAAAGGGTGCCAGACAGCTGTAGA | + |
Preference number: 5 (lower is better) Translates to: GACGSTAGCCRGPCT*RRAASAQRVPDSCR Trigger: TCTACAGCTGTCTGGCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 90 bp | CATGTACAGGCAGAAGGCAATGCCCAGGGTGTCTTGCAGGACCCATaGCCACCTGCACGTGCAGAAGGGCAGCTTCCGCACAAAGGGTGC | + |
Preference number: 5 (lower is better) Translates to: HVQAEGNAQGVLQDP*PPARAEGQLPHKGC Trigger: GCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGTGGGCATGGGTCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGTACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219614.2 |
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CDS-3UTR CAA 90 bp | AGCTGTCCCTGTCCCCTGCAGGTCCCAGGTGGTCAGCATCTGTGTGGCGTGGAACCGAGTCCTACTGGTTaGGGACACCACTCGAAGCAC | + |
Preference number: 5 (lower is better) Translates to: SCPCPLQVPGGQHLCGVEPSPTG*GHHSKH Trigger: GTGCTTCGAGTGGTGTCCCAAACCAGTAGGACTCGG...TTCCACGCCACACAGATGCTGACCACCTGGGACCTGCAGGGGACAGGGACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CAA 90 bp | TCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCCGCGGGCAGAGTGCCTCCTCATACTGTGTCTaGTTGCCTCCTGGAGGGACC | + |
Preference number: 5 (lower is better) Translates to: SILAWTLLKGFGPRGQSASSYCV*LPPGGT Trigger: GGTCCCTCCAGGAGGCAACAAGACACAGTATGAGGA...GGCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CAA 90 bp | TCCATCTTGGCATGGACTCTCCTGAAGGGGTTTGGGCCCCGCGGGCAGAGTGCCATGCTGTTGCCACTCTaGGTCAGGAAGGGGGTGATG | + |
Preference number: 5 (lower is better) Translates to: SILAWTLLKGFGPRGQSAMLLPL*VRKGVM Trigger: CATCACCCCCTTCCTGACCAAGAGTGGCAACAGCAT...GGCACTCTGCCCGCGGGGCCCAAACCCCTTCAGGAGAGTCCATGCCAAGATGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CAA 90 bp | CATGCAGCATGTGTGCTGGGCTCCCTGCAGGCAGATCTGTCATGGAGTCCAGAGGGACTGGCCACAGGGTaGTCAGGATCCTTGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: HAACVLGSLQADLSWSPEGLATG*SGSLAG Trigger: CCCTGCCAAGGATCCTGACAACCCTGTGGCCAGTCC...CTCTGGACTCCATGACAGATCTGCCTGCAGGGAGCCCAGCACACATGCTGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 90 bp | GTGGCAAGTGGGCCCACTGTGGGTTGTAGAGGATGCAGTAGTCCCTaGTCCGAGTCCTACTGGTTTGGGACACCACTCGAAGCACGCCGA | + |
Preference number: 5 (lower is better) Translates to: VASGPTVGCRGCSSP*SESYWFGTPLEARR Trigger: TCGGCGTGCTTCGAGTGGTGTCCCAAACCAGTAGGACTCGGAGCAGGGACTACTGCATCCTCTACAACCCACAGTGGGCCCACTTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 90 bp | ATTTCGGAAGATACCCCACACCACGGAGACAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGCCTGTGGGCGCTGCACGTGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: ISEDTPHHGDSDTEE*QQQHAGLWALHVQK Trigger: CTTCTGCACGTGCAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACTGTCTCCGTGGTGTGGGGTATCTTCCGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219951.2 |
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CDS GCA 90 bp | ATGGTCTTCAGCATGTACAGGCAGAAGGCAATGCCCAGGGTGTCTTaGAGGACCCATGCCCACCTGCACGTGCAGAAGGGCAGCTTCCGC | + |
Preference number: 5 (lower is better) Translates to: MVFSMYRQKAMPRVS*RTHAHLHVQKGSFR Trigger: GCGGAAGCTGCCCTTCTGCACGTGCAGGTGGGCATGGGTCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGTACATGCTGAAGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219614.2 |
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CDS GCA 90 bp | ATTTCGGAAGATACCCCACACCACGGAGACAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGCCTGTGGGCGCTTGTGGAAGTACGG | + |
Preference number: 5 (lower is better) Translates to: ISEDTPHHGDSDTEE*QQQHAGLWALVEVR Trigger: CCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACTGTCTCCGTGGTGTGGGGTATCTTCCGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS-3UTR CAA 90 bp | GGCTCCCGAGTTCTATCCCAGAGTGTGGGGACTGTGGCCTCTGCCTCGGTGACAACCAGTGCGATTTGGTaGGTGAAGTCTTCTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: GSRVLSQSVGTVASASVTTSAIW*VKSSAG Trigger: CCCTGCAGAAGACTTCACCAACCAAATCGCACTGGT...TGTCACCGAGGCAGAGGCCACAGTCCCCACACTCTGGGATAGAACTCGGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS-3UTR CAA 90 bp | CCCAACATAGGAACCTGCTTGTTGGGGTTGCTCTGGCCCCAGAGCCCAGCCCTGTTCAGGAGAGACACTTaGCTGAGGTCATGTGGCAAG | + |
Preference number: 5 (lower is better) Translates to: PNIGTCLLGLLWPQSPALFRRDT*LRSCGK Trigger: CTTGCCACATGACCTCAGCAAAGTGTCTCTCCTGAA...CAGGGCTGGGCTCTGGGGCCAGAGCAACCCCAACAAGCAGGTTCCTATGTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS TCA 90 bp | GCTGGGTGGTGCTCAAGTCTCGAAGCTTCAGGAGAGACACTTTGCTaGGGTCATGTGGCAAGTGGGCCCACTGTGGGTTGTAGAGGATGC | + |
Preference number: 5 (lower is better) Translates to: AGWCSSLEASGETLC*GHVASGPTVGCRGC Trigger: GCATCCTCTACAACCCACAGTGGGCCCACTTGCCACATGACCTCAGCAAAGTGTCTCTCCTGAAGCTTCGAGACTTGAGCACCACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 90 bp | CAGGAGAGACACTTTGCTGAGGTCATGTGGCAAGTGGGCCCACTGTaGGTTGTAGAGGATGCAGTAGTCCCTGCTCCGAGTCCTACTGGT | + |
Preference number: 5 (lower is better) Translates to: QERHFAEVMWQVGPL*VVEDAVVPAPSPTG Trigger: ACCAGTAGGACTCGGAGCAGGGACTACTGCATCCTCTACAACCCACAGTGGGCCCACTTGCCACATGACCTCAGCAAAGTGTCTCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 90 bp | GGCCACAGGGATGCTTATCTCCTCATACTGTGTCTTGTTGCCTCCTaGAGGGACCAGCTTCTCCTTGCTGACTATCAGCAGCCCGTGAGC | + |
Preference number: 5 (lower is better) Translates to: GHRDAYLLILCLVAS*RDQLLLADYQQPVS Trigger: GCTCACGGGCTGCTGATAGTCAGCAAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGACACAGTATGAGGAGATAAGCATCCCTGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS TCA 90 bp | TACAGTGCCACCATTACCTCACGGCCAAAGCGCCTGAAGATGTCTTaGAGGTCTCTGTGGCTCAGCAGGGCCACAGGGATGCTTATCTCC | + |
Preference number: 5 (lower is better) Translates to: YSATITSRPKRLKMS*RSLWLSRATGMLIS Trigger: GGAGATAAGCATCCCTGTGGCCCTGCTGAGCCACAGAGACCTTCAAGACATCTTCAGGCGCTTTGGCCGTGAGGTAATGGTGGCACTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS GCA 90 bp | CAGCCGCACTTTCTCATAGAAGGTACAGTTGCCCCGGGCCACCAGTaGGATTTGGTTGGTGAAGTCTTCTGCAGGGACGTCAAGGTAGGA | + |
Preference number: 5 (lower is better) Translates to: QPHFLIEGTVAPGHQ*DLVGEVFCRDVKVG Trigger: TCCTACCTTGACGTCCCTGCAGAAGACTTCACCAACCAAATCGCACTGGTGGCCCGGGGCAACTGTACCTTCTATGAGAAAGTGCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 90 bp | ATGGTCTTCAGCATGTACAGGCAGAAGGCAATGCCCAGGGTGTCTTaGAGGACCCATGCCCACTGGTCCTCATTTCGGAAGATACCCCAC | + |
Preference number: 5 (lower is better) Translates to: MVFSMYRQKAMPRVS*RTHAHWSSFRKIPH Trigger: GTGGGGTATCTTCCGAAATGAGGACCAGTGGGCATGGGTCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGTACATGCTGAAGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219951.2 ENSMUST00000220091.2 |
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CDS GCA 90 bp | GATGACCATGTTGTAGTCCATCACTGGCTCGCTCGGAGCATACAGTaGCACCATTACCTCACGGCCAAAGCGCCTGAAGATGTCTTGAAG | + |
Preference number: 5 (lower is better) Translates to: DDHVVVHHWLARSIQ*HHYLTAKAPEDVLK Trigger: CTTCAAGACATCTTCAGGCGCTTTGGCCGTGAGGTAATGGTGGCACTGTATGCTCCGAGCGAGCCAGTGATGGACTACAACATGGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |
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CDS CCA 90 bp | GGAGGCCCAGGCCATAGGCAATGGTACAGGCCACAAAGTAAATTCTaGAGGACTGCACCTGGATATCAAACCTGTGACAGTAGGCCACCA | + |
Preference number: 5 (lower is better) Translates to: GGPGHRQWYRPQSKF*RTAPGYQTCDSRPP Trigger: TGGTGGCCTACTGTCACAGGTTTGATATCCAGGTGCAGTCCTCCAGAATTTACTTTGTGGCCTGTACCATTGCCTATGGCCTGGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219951.2 ENSMUST00000220091.2 |
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CDS CCA 90 bp | CACAAGCATGAAGCAGCACATTACAACAAACACGCAGATCATGACTaGCGTCACGTCCACCGCCTCATCCTCCTGTTTCTCAGGACCATC | + |
Preference number: 5 (lower is better) Translates to: HKHEAAHYNKHADHD*RHVHRLILLFLRTI Trigger: GATGGTCCTGAGAAACAGGAGGATGAGGCGGTGGACGTGACGCCAGTCATGATCTGCGTGTTTGTTGTAATGTGCTGCTTCATGCTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 ENSMUST00000220091.2 |
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CDS GCA 72 bp | CCCACGGGGTCTGAGGTGCATCCTTCGCAAAACCGCTaGCCGTCCAGAAGGCACCCAGCTCCCGGCGCCACA | + |
Preference number: 6 (lower is better) Translates to: PTGSEVHPSQNR*PSRRHPAPGAT Trigger: TGTGGCGCCGGGAGCTGGGTGCCTTCTGGACGGGCAGCGGTTTTGCGAAGGATGCACCTCAGACCCCGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 72 bp | CACAGGTCCCTGGGTTGCGGCCCACGGGGTCTGAGGTaGATCCTTCGCAAAACCGCTGCCCGTCCAGAAGGC | + |
Preference number: 6 (lower is better) Translates to: HRSLGCGPRGLR*ILRKTAARPEG Trigger: GCCTTCTGGACGGGCAGCGGTTTTGCGAAGGATGCACCTCAGACCCCGTGGGCCGCAACCCAGGGACCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 72 bp | GACACAGAAGAGTGCCAGCAGCAGCATGCGGGCCTGTaGGCGCTGCACGTGCAGAAGGGCAGCTTCCGCACA | + |
Preference number: 6 (lower is better) Translates to: DTEECQQQHAGL*ALHVQKGSFRT Trigger: TGTGCGGAAGCTGCCCTTCTGCACGTGCAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219951.2 |
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CDS CAA 72 bp | CGGGCCTGTGGGCGCTTGTGGAAGTACGGCAGGTTGTaGTCGGGGACCCTGCACGTGCAGAAGGGCAGCTTC | + |
Preference number: 6 (lower is better) Translates to: RACGRLWKYGRL*SGTLHVQKGSF Trigger: GAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS CAA 72 bp | ATGCGGGCCTGTGGGCGCTTGTGGAAGTACGGCAGGTaGTTGTCGGGGACCCTGCACGTGCAGAAGGGCAGC | + |
Preference number: 6 (lower is better) Translates to: MRACGRLWKYGR*LSGTLHVQKGS Trigger: GCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS CAA 90 bp | AGCAGCAGCATGCGGGCCTGTGGGCGCTTGTGGAAGTACGGCAGGTaGTTGTCGGGGACCCTGCACGTGCAGAAGGGCAGCTTCCGCACA | + |
Preference number: 6 (lower is better) Translates to: SSSMRACGRLWKYGR*LSGTLHVQKGSFRT Trigger: TGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 72 bp | GATACCCCACACCACGGAGACAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGCCTGTGGGCGCTGCAC | + |
Preference number: 6 (lower is better) Translates to: DTPHHGDSDTEE*QQQHAGLWALH Trigger: GTGCAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACTGTCTCCGTGGTGTGGGGTATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219951.2 |
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CDS CAA 90 bp | AGCAGCATGCGGGCCTGTGGGCGCTTGTGGAAGTACGGCAGGTTGTaGTCGGGGACCCTGCACGTGCAGAAGGGCAGCTTCCGCACAAAG | + |
Preference number: 6 (lower is better) Translates to: SSMRACGRLWKYGRL*SGTLHVQKGSFRTK Trigger: CTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS CAA 90 bp | GTGACACAGAAGAGTGCCAGCAGCAGCATGCGGGCCTGTGGGCGCTaGTGGAAGTACGGCAGGTTGTTGTCGGGGACCCTGCACGTGCAG | + |
Preference number: 6 (lower is better) Translates to: VTQKSASSSMRACGR*WKYGRLLSGTLHVQ Trigger: CTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS TCA 72 bp | TCTTGTTGCCTCCTGGAGGGACCAGCTTCTCCTTGCTaGCTATCAGCAGCCCGTGAGCCCCACTGCCCTGGG | + |
Preference number: 6 (lower is better) Translates to: SCCLLEGPASPC*LSAAREPHCPG Trigger: CCCAGGGCAGTGGGGCTCACGGGCTGCTGATAGTCAGCAAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS TCA 72 bp | GACAGTAGGCCACCAGCAGCCCTTCTCATGGGTGGATaGGTTCGAGGGCCCGGTGGCCACCTCCACCATGAT | + |
Preference number: 6 (lower is better) Translates to: DSRPPAALLMGG*VRGPGGHLHHD Trigger: ATCATGGTGGAGGTGGCCACCGGGCCCTCGAACTCATCCACCCATGAGAAGGGCTGCTGGTGGCCTACTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220091.2 |
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CDS GCA 72 bp | GGAAGTACGGCAGGTTGTTGTCGGGGACCCTGCACGTaGAGAAGGGCAGCTTCCGCACAAAGGGTGCCAGAC | + |
Preference number: 6 (lower is better) Translates to: GSTAGCCRGPCT*RRAASAQRVPD Trigger: GTCTGGCACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 72 bp | GATACCCCACACCACGGAGACAGTGACACAGAAGAGTaGCAGCAGCAGCATGCGGGCCTGTGGGCGCTTGTG | + |
Preference number: 6 (lower is better) Translates to: DTPHHGDSDTEE*QQQHAGLWALV Trigger: CACAAGCGCCCACAGGCCCGCATGCTGCTGCTGGCACTCTTCTGTGTCACTGTCTCCGTGGTGTGGGGTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 72 bp | GCTTGTGGAAGTACGGCAGGTTGTTGTCGGGGACCCTaGACGTGCAGAAGGGCAGCTTCCGCACAAAGGGTG | + |
Preference number: 6 (lower is better) Translates to: ACGSTAGCCRGP*TCRRAASAQRV Trigger: CACCCTTTGTGCGGAAGCTGCCCTTCTGCACGTGCAGGGTCCCCGACAACAACCTGCCGTACTTCCACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000220091.2 |
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CDS GCA 72 bp | GGCGGATGGTCTTCAGCATGTACAGGCAGAAGGCAATaGCCAGGGTGTCTTGCAGGACCCATGCCCACCTGC | + |
Preference number: 6 (lower is better) Translates to: GGWSSACTGRRQ*PGCLAGPMPTC Trigger: GCAGGTGGGCATGGGTCCTGCAAGACACCCTGGGCATTGCCTTCTGCCTGTACATGCTGAAGACCATCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219614.2 |
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CDS CAA 90 bp | TGGGTTGTAGAGGATGCAGTAGTCCCTGCTCCGAGTCCTACTGGTTaGGGACACCACTCGAAGCACGCCGAACTCACAGGCCACCTGGGC | + |
Preference number: 6 (lower is better) Translates to: WVVEDAVVPAPSPTG*GHHSKHAELTGHLG Trigger: GCCCAGGTGGCCTGTGAGTTCGGCGTGCTTCGAGTGGTGTCCCAAACCAGTAGGACTCGGAGCAGGGACTACTGCATCCTCTACAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 72 bp | GGGCCCACTGTGGGTTGTAGAGGATGCAGTAGTCCCTaGTCCGAGTCCTACTGGTTTGGGACACCACTCGAA | + |
Preference number: 6 (lower is better) Translates to: GPTVGCRGCSSP*SESYWFGTPLE Trigger: TTCGAGTGGTGTCCCAAACCAGTAGGACTCGGAGCAGGGACTACTGCATCCTCTACAACCCACAGTGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS TCA 72 bp | ACCATTACCTCACGGCCAAAGCGCCTGAAGATGTCTTaGAGGTCTCTGTGGCTCAGCAGGGCCACAGGGATG | + |
Preference number: 6 (lower is better) Translates to: TITSRPKRLKMS*RSLWLSRATGM Trigger: CATCCCTGTGGCCCTGCTGAGCCACAGAGACCTTCAAGACATCTTCAGGCGCTTTGGCCGTGAGGTAATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |
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CDS GCA 72 bp | CTCGCTTATGCTTCATGTACTTCTTCACATCATGGCTaGCAGCCCAGTAGCCACCGATGGCGACGGTGCCCA | + |
Preference number: 6 (lower is better) Translates to: LAYASCTSSHHG*QPSSHRWRRCP Trigger: TGGGCACCGTCGCCATCGGTGGCTACTGGGCTGGCAGCCATGATGTGAAGAAGTACATGAAGCATAAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |
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CDS CCA 72 bp | TGTAGAGGATGCAGTAGTCCCTGCTCCGAGTCCTACTaGTTTGGGACACCACTCGAAGCACGCCGAACTCAC | + |
Preference number: 6 (lower is better) Translates to: CRGCSSPCSESY*FGTPLEARRTH Trigger: GTGAGTTCGGCGTGCTTCGAGTGGTGTCCCAAACCAGTAGGACTCGGAGCAGGGACTACTGCATCCTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 72 bp | CACTTTGCTGAGGTCATGTGGCAAGTGGGCCCACTGTaGGTTGTAGAGGATGCAGTAGTCCCTGCTCCGAGT | + |
Preference number: 6 (lower is better) Translates to: HFAEVMWQVGPL*VVEDAVVPAPS Trigger: ACTCGGAGCAGGGACTACTGCATCCTCTACAACCCACAGTGGGCCCACTTGCCACATGACCTCAGCAAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CAA 90 bp | CTCAGCAGGGCCACAGGGATGCTTATCTCCTCATACTGTGTCTTGTaGCCTCCTGGAGGGACCAGCTTCTCCTTGCTGACTATCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: LSRATGMLISSYCVL*PPGGTSFSLLTISS Trigger: GCTGCTGATAGTCAGCAAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGACACAGTATGAGGAGATAAGCATCCCTGTGGCCCTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS TCA 72 bp | CATACAGTGCCACCATTACCTCACGGCCAAAGCGCCTaGAGATGTCTTGAAGGTCTCTGTGGCTCAGCAGGG | + |
Preference number: 6 (lower is better) Translates to: HTVPPLPHGQSA*RCLEGLCGSAG Trigger: CCCTGCTGAGCCACAGAGACCTTCAAGACATCTTCAGGCGCTTTGGCCGTGAGGTAATGGTGGCACTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |
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CDS GCA 72 bp | GTTGTAGTCCATCACTGGCTCGCTCGGAGCATACAGTaGCACCATTACCTCACGGCCAAAGCGCCTGAAGAT | + |
Preference number: 6 (lower is better) Translates to: VVVHHWLARSIQ*HHYLTAKAPED Trigger: ATCTTCAGGCGCTTTGGCCGTGAGGTAATGGTGGCACTGTATGCTCCGAGCGAGCCAGTGATGGACTACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |
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CDS CAA 72 bp | AGGGCCACAGGGATGCTTATCTCCTCATACTGTGTCTaGTTGCCTCCTGGAGGGACCAGCTTCTCCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: RATGMLISSYCV*LPPGGTSFSLL Trigger: CAGCAAGGAGAAGCTGGTCCCTCCAGGAGGCAACAAGACACAGTATGAGGAGATAAGCATCCCTGTGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035597.10 ENSMUST00000219614.2 |
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CDS TCA 72 bp | TGCTCAAGTCTCGAAGCTTCAGGAGAGACACTTTGCTaGGGTCATGTGGCAAGTGGGCCCACTGTGGGTTGT | + |
Preference number: 6 (lower is better) Translates to: CSSLEASGETLC*GHVASGPTVGC Trigger: ACAACCCACAGTGGGCCCACTTGCCACATGACCTCAGCAAAGTGTCTCTCCTGAAGCTTCGAGACTTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS GCA 72 bp | TTTCTCATAGAAGGTACAGTTGCCCCGGGCCACCAGTaGGATTTGGTTGGTGAAGTCTTCTGCAGGGACGTC | + |
Preference number: 6 (lower is better) Translates to: FLIEGTVAPGHQ*DLVGEVFCRDV Trigger: GACGTCCCTGCAGAAGACTTCACCAACCAAATCGCACTGGTGGCCCGGGGCAACTGTACCTTCTATGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 72 bp | CTTCTGCAGGGACGTCAAGGTAGGAACAGAGCTGGGTaGTGCTCAAGTCTCGAAGCTTCAGGAGAGACACTT | + |
Preference number: 6 (lower is better) Translates to: LLQGRQGRNRAG*CSSLEASGETL Trigger: AAGTGTCTCTCCTGAAGCTTCGAGACTTGAGCACCACCCAGCTCTGTTCCTACCTTGACGTCCCTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CAA 72 bp | ATAGAAGGTACAGTTGCCCCGGGCCACCAGTGCGATTaGGTTGGTGAAGTCTTCTGCAGGGACGTCAAGGTA | + |
Preference number: 6 (lower is better) Translates to: IEGTVAPGHQCD*VGEVFCRDVKV Trigger: TACCTTGACGTCCCTGCAGAAGACTTCACCAACCAAATCGCACTGGTGGCCCGGGGCAACTGTACCTTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CAA 90 bp | CACTTTCTCATAGAAGGTACAGTTGCCCCGGGCCACCAGTGCGATTaGGTTGGTGAAGTCTTCTGCAGGGACGTCAAGGTAGGAACAGAG | + |
Preference number: 6 (lower is better) Translates to: HFLIEGTVAPGHQCD*VGEVFCRDVKVGTE Trigger: CTCTGTTCCTACCTTGACGTCCCTGCAGAAGACTTCACCAACCAAATCGCACTGGTGGCCCGGGGCAACTGTACCTTCTATGAGAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035597.10 |
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CDS CCA 72 bp | GAAGCAGCACATTACAACAAACACGCAGATCATGACTaGCGTCACGTCCACCGCCTCATCCTCCTGTTTCTC | + |
Preference number: 6 (lower is better) Translates to: EAAHYNKHADHD*RHVHRLILLFL Trigger: GAGAAACAGGAGGATGAGGCGGTGGACGTGACGCCAGTCATGATCTGCGTGTTTGTTGTAATGTGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 ENSMUST00000220091.2 |
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CDS CCA 72 bp | CATGACAAAGATGATGACCATGTTGTAGTCCATCACTaGCTCGCTCGGAGCATACAGTGCCACCATTACCTC | + |
Preference number: 6 (lower is better) Translates to: HDKDDDHVVVHH*LARSIQCHHYL Trigger: GAGGTAATGGTGGCACTGTATGCTCCGAGCGAGCCAGTGATGGACTACAACATGGTCATCATCTTTGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035597.10 ENSMUST00000218789.2 ENSMUST00000219614.2 |