Pregenerated sensors for SPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029304Ensembl transcript IDs: ENSMUST00000031243.15, ENSMUST00000086833.13, ENSMUST00000112746.8, ENSMUST00000112747.2, ENSMUST00000112748.8, ENSMUST00000132457.8, ENSMUST00000145084.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTaGAGAAGCTTTTGGTTACAACGGTGTTTGCATGAAACAACAGAC | + |
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Preference number: 1 (lower is better) Translates to: AVAVCISCTGRTEAK*RSFWLQRCLHETTD Trigger: GTCTGTTGTTTCATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCCCTGATCAGAGGGCATaGTCAGAAGCTGGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: AVAVCISCTGRTEAKCRSPDQRA*SEAGQQ Trigger: CTGTTGCCCAGCTTCTGAGCATGCCCTCTGATCAGG...GCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTAGGAGATTCTGCTTCTaGGATGGGTCAGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QWPFAFLVQEEQKQSAEARRFCF*DGSGTS Trigger: GCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCT...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCGTAAAGCTTCTCCTCTaGGCTGCCAGAATCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVAVCISCTGRTEAKCRSVKLLL*AARISH Trigger: GTGACTGATTCTGGCAGCTCAGAGGAGAAGCTTTAC...GCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTCCTGATCAGAGGGCATaGTCAGAAGCTGGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLPDQRA*SEAGQQ Trigger: CTGTTGCCCAGCTTCTGAGCATGCCCTCTGATCAGG...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTCCTCGCTCTCTGCATaGTCTCCATCGTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAVCISCTGRTEAKCRSSSLSA*SPSSSS Trigger: TGATGATGACGATGGAGACCATGCAGAGAGCGAGGA...GCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTCTTCATGTGAGAGGTaGGGTCCTCATCTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKSSCER*GPHLWH Trigger: ATGCCACAGATGAGGACCTCACCTCTCACATGAAGA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTCACCGCTCTTCATGTaGGAGGTGAGGTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFSPLFM*EVRSSS Trigger: AGATGAGGACCTCACCTCTCACATGAAGAGCGGTGA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGAGAATCCTCGCTCTCTaGATGGTCTCCATCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKRILAL*MVSIVI Trigger: GATGACGATGGAGACCATGCAGAGAGCGAGGATTCT...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTCCTCGCTCTCTGCATaGTCTCCATCGTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QWPFAFLVQEEQKQSAEASSLSA*SPSSSS Trigger: TGATGATGACGATGGAGACCATGCAGAGAGCGAGGA...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCGAAACTCCTAGACTTTaGCCTCAGTCCATAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: AVAVCISCTGRTEAKCRSETPRL*PQSISQ Trigger: TTGGCTTATGGACTGAGGTCAAAGTCTAGGAGTTTC...GCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTCTTCATGTGAGAGGTaGGGTCCTCATCTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLSSCER*GPHLWH Trigger: ATGCCACAGATGAGGACCTCACCTCTCACATGAAGA...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTCACCGCTCTTCATGTaGGAGGTGAGGTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHSPLFM*EVRSSS Trigger: AGATGAGGACCTCACCTCTCACATGAAGAGCGGTGA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTAAGCTTCTTCTCCTCTaGGCTGCCAGAATCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLKLLLL*AARISH Trigger: GTGACTGATTCTGGCAGCTCAGAGGAGAAGAAGCTT...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086833.13 |
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| CDS-3UTR GCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGGAGGGAGGAGGCAATaGCAAACAGGCAAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFGGRRQ*QTGKSK Trigger: TTTGCTTTTGCCTGTTTGGCATTGCCTCCTCCCTCC...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTGCTTCTCCTCTGAGCTaGCAGAATCAGTCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWPFAFLVQEEQKQSAEAASPLS*QNQSLS Trigger: TGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGC...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGGCTTCTCCTCTGAGCTaGCAGAATCAGTCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKASPLS*QNQSLS Trigger: TGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGC...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTAGAATCCTCGCTCTCTaGATGGTCTCCATCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLRILAL*MVSIVI Trigger: GATGACGATGGAGACCATGCAGAGAGCGAGGATTCT...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTGTGGCTATAGGATCTaGGTGCAGGCTGTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWPFAFLVQEEQKQSAEACGYRI*VQAVKL Trigger: AAGCTTTACAGCCTGCACCCAGATCCTATAGCCACA...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTCCTCGCTCTCTGCATaGTCTCCATCGTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLSSLSA*SPSSSS Trigger: TGATGATGACGATGGAGACCATGCAGAGAGCGAGGA...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKVPGWL*NLLDYR Trigger: TCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAAC...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTCTGATGTTCCAGGCTaGCTTTGGAACTTGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKSDVPG*LWNLLD Trigger: GTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATGTAAAGCTTCTCCTCTaGGCTGCCAGAATCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHVKLLL*AARISH Trigger: GTGACTGATTCTGGCAGCTCAGAGGAGAAGCTTTAC...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTCTTCATGTGAGAGGTaGGGTCCTCATCTGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHSSCER*GPHLWH Trigger: ATGCCACAGATGAGGACCTCACCTCTCACATGAAGA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | ATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAACCTGATCAGAGGGCATaGTCAGAAGCTGGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: IIKMQWPFAFLVQEEQKQPDQRA*SEAGQQ Trigger: CTGTTGCCCAGCTTCTGAGCATGCCCTCTGATCAGG...TTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTCTTCTCCTCTGAGCTaGCAGAATCAGTCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKSSPLS*QNQSLS Trigger: TGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086833.13 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGTGGCTATAGGATCTaGGTGCAGGCTGTAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFCGYRI*VQAVKL Trigger: AAGCTTTACAGCCTGCACCCAGATCCTATAGCCACA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTCGTCCATGTGGTCATaGCTTTCATTGGAATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: AVAVCISCTGRTEAKCRSSSMWS*LSLELL Trigger: AAGCAATTCCAATGAAAGCCATGACCACATGGACGA...GCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFSPGSL*NAQVCV Trigger: CACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGA | + |
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Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFVPGWL*NLLDYR Trigger: TCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAAC...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTCTGATGTTCCAGGCTaGCTTTGGAACTTGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFSDVPG*LWNLLD Trigger: GTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTAAAGCTTCTCCTCTaGGCTGCCAGAATCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGVKLLL*AARISH Trigger: GTGACTGATTCTGGCAGCTCAGAGGAGAAGCTTTAC...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR TCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAGGAGATTCTGCTTCTaGGATGGGTCAGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQRRFCF*DGSGTS Trigger: GCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCT...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGGAGGGAGGAGGCAATaGCAAACAGGCAAAAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGGGRRQ*QTGKSK Trigger: TTTGCTTTTGCCTGTTTGGCATTGCCTCCTCCCTCC...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTAGAATCCTCGCTCTCTaGATGGTCTCCATCGTCATC | + |
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Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGRILAL*MVSIVI Trigger: GATGACGATGGAGACCATGCAGAGAGCGAGGATTCT...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGCCTGATCAGAGGGCATaGTCAGAAGCTGGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQPDQRA*SEAGQQ Trigger: CTGTTGCCCAGCTTCTGAGCATGCCCTCTGATCAGG...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTGTGGCTATAGGATCTaGGTGCAGGCTGTAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHCGYRI*VQAVKL Trigger: AAGCTTTACAGCCTGCACCCAGATCCTATAGCCACA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTCGTCCATGTGGTCATaGCTTTCATTGGAATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKSSMWS*LSLELL Trigger: AAGCAATTCCAATGAAAGCCATGACCACATGGACGA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTCATCGTCGTCCATGTaGTCATGGCTTTCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFSSSSM*SWLSLE Trigger: TTCCAATGAAAGCCATGACCACATGGACGACGATGA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHSPGSL*NAQVCV Trigger: CACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATGAAACTCCTAGACTTTaGCCTCAGTCCATAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHETPRL*PQSISQ Trigger: TTGGCTTATGGACTGAGGTCAAAGTCTAGGAGTTTC...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGGGTCATGGCTTTCATTaGAATTGCTTGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKGHGFH*NCLEEF Trigger: AAACTCTTCCAAGCAATTCCAATGAAAGCCATGACC...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTCGTCCATGTGGTCATaGCTTTCATTGGAATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFSSMWS*LSLELL Trigger: AAGCAATTCCAATGAAAGCCATGACCACATGGACGA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGTCATCGTCGTCCATGTaGTCATGGCTTTCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGRTEAKCRSFWLQRCLSSSSM*SWLSLE Trigger: TTCCAATGAAAGCCATGACCACATGGACGACGATGA...CAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTGTTCATCAGAAACCTaGAAACTCCTAGACTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKCSSET*KLLDFD Trigger: GTCAAAGTCTAGGAGTTTCCAGGTTTCTGATGAACA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGSPGSL*NAQVCV Trigger: CACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGA...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTTCTGATGTTCCAGGCTaGCTTTGGAACTTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGSDVPG*LWNLLD Trigger: GTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGA...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGAAACTCCTAGACTTTaGCCTCAGTCCATAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGETPRL*PQSISQ Trigger: TTGGCTTATGGACTGAGGTCAAAGTCTAGGAGTTTC...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR GCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGGGAGGGAGGAGGCAATaGCAAACAGGCAAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQGGRRQ*QTGKSK Trigger: TTTGCTTTTGCCTGTTTGGCATTGCCTCCTCCCTCC...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR GCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAGAATCCTCGCTCTCTaGATGGTCTCCATCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQRILAL*MVSIVI Trigger: GATGACGATGGAGACCATGCAGAGAGCGAGGATTCT...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAATGTGGCTATAGGATCTaGGTGCAGGCTGTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIKMQWPFAFLVQEEQKQCGYRI*VQAVKL Trigger: AAGCTTTACAGCCTGCACCCAGATCCTATAGCCACA...TTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGATTCTGCTTCTGAGATaGGTCAGGCACCAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQILLLR*VRHQPC Trigger: ACATGGCTGGTGCCTGACCCATCTCAGAAGCAGAAT...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGGTCATGGCTTTCATTaGAATTGCTTGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVCISCTGRTEAKCRSFGHGFH*NCLEEF Trigger: AAACTCTTCCAAGCAATTCCAATGAAAGCCATGACC...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTGGTCATGGCTTTCATTaGAATTGCTTGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLGHGFH*NCLEEF Trigger: AAACTCTTCCAAGCAATTCCAATGAAAGCCATGACC...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTTCATCGTCGTCCATGTaGTCATGGCTTTCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGSSSSM*SWLSLE Trigger: TTCCAATGAAAGCCATGACCACATGGACGACGATGA...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGTTCATCAGAAACCTaGAAACTCCTAGACTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLCSSET*KLLDFD Trigger: GTCAAAGTCTAGGAGTTTCCAGGTTTCTGATGAACA...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: IIKMQWPFAFLVQEEQKQVPGWL*NLLDYR Trigger: TCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAAC...TTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAATCTGATGTTCCAGGCTaGCTTTGGAACTTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIKMQWPFAFLVQEEQKQSDVPG*LWNLLD Trigger: GTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGA...TTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQSPGSL*NAQVCV Trigger: CACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGA...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQVPGWL*NLLDYR Trigger: TCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAAC...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGTCATCGTCGTCCATGTaGTCATGGCTTTCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQSSSSM*SWLSLE Trigger: TTCCAATGAAAGCCATGACCACATGGACGACGATGA...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCTTGGAAGAGTTTCTTaGTTAAAGTCATCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTGRTEAKCRSFWLQRCLLGRVS*LKSSFS Trigger: AGAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAG...CAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAATGTTCATCAGAAACCTaGAAACTCCTAGACTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIKMQWPFAFLVQEEQKQCSSET*KLLDFD Trigger: GTCAAAGTCTAGGAGTTTCCAGGTTTCTGATGAACA...TTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTCTTGGAAGAGTTTCTTaGTTAAAGTCATCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGLGRVS*LKSSFS Trigger: AGAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAG...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGGGTCATGGCTTTCATTaGAATTGCTTGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQGHGFH*NCLEEF Trigger: AAACTCTTCCAAGCAATTCCAATGAAAGCCATGACC...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTACATACATATATCCACTGAACTGAGAAATGAGCAGTTAGTATTCCTGCTTGGAAGAGTTTCTTaGTTAAAGTCATCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLYIHISTELRNEQLVFLLGRVS*LKSSFS Trigger: AGAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAG...CAGGAATACTAACTGCTCATTTCTCAGTTCAGTGGATATATGTATGTAGAGAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CCA 90 bp | AGAGGACACAGCATTCTGTGGCGCAAGGAGATTCTGCTTCTGAGATaGGTCAGGCACCAGCCATGTGGCTATAGGATCTGGGTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGHSILWRKEILLLR*VRHQPCGYRIWVQA Trigger: AGCCTGCACCCAGATCCTATAGCCACATGGCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCTTGCGCCACAGAATGCTGTGTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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| CDS TCA 90 bp | CCATGTGGCTATAGGATCTGGGTGCAGGCTGTAAAGCTTCTCCTCTaGGCTGCCAGAATCAGTCACTTTCACCGGGAGGGAGGAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCGYRIWVQAVKLLL*AARISHFHREGGGN Trigger: ATTGCCTCCTCCCTCCCGGTGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGCTTTACAGCCTGCACCCAGATCCTATAGCCACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000132457.8 |
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| CDS TCA 90 bp | TCTTCAGAGGACACAGCATTCTGTGGCGCAAGGAGATTCTGCTTCTaGGATGGGTCAGGCACCAGCCATGTGGCTATAGGATCTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEDTAFCGARRFCF*DGSGTSHVAIGSGC Trigger: GCACCCAGATCCTATAGCCACATGGCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCTTGCGCCACAGAATGCTGTGTCCTCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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| CDS TCA 90 bp | TGTGGCTATAGGATCTGGGTGCAGGCTGTAAAGCTTCTTCTCCTCTaGGCTGCCAGAATCAGTCACTTTCACCGGGAGGGAGGAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CGYRIWVQAVKLLLL*AARISHFHREGGGN Trigger: ATTGCCTCCTCCCTCCCGGTGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGAAGCTTTACAGCCTGCACCCAGATCCTATAGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000145084.8 |
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| CDS GCA 90 bp | GCTGTGAAACTTGTGGCTCTGATGTTCCAGGCTGGCTTTGGAACTTaGTTGACTATCGATCACATCCGACTGATCGGCACTCTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVKLVALMFQAGFGT*LTIDHIRLIGTLLA Trigger: AGCCAGGAGAGTGCCGATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCACAAGTTTCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS TCA 90 bp | GGCATCAGGATACTGTTCATCAGAAACCTGGAAACTCCTAGACTTTaGCCTCAGTCCATAAGCCAAGCTATCACCTCGGCCGTTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GIRILFIRNLETPRL*PQSISQAITSAVGD Trigger: GTCCCCAACGGCCGAGGTGATAGCTTGGCTTATGGACTGAGGTCAAAGTCTAGGAGTTTCCAGGTTTCTGATGAACAGTATCCTGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS GCA 90 bp | TGTGTGTTTCCAGACTTGGTTCATCCAGCTGACTTGACTCATGGCTaGCCTTTCCGTTGTTGTCCTGATCAGAGGGCATGCTCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CVFPDLVHPADLTHG*PFRCCPDQRACSEA Trigger: AGCTTCTGAGCATGCCCTCTGATCAGGACAACAACGGAAAGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGGAAACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS CCA 90 bp | GATTCGTCAGATTCATCCGAGTCCACAGAATCCTCGCTCTCTGCATaGTCTCCATCGTCATCATCATCGTCATCATCGTCGTCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSSDSSESTESSLSA*SPSSSSSSSSSSMW Trigger: CCACATGGACGACGATGATGACGATGATGATGACGATGGAGACCATGCAGAGAGCGAGGATTCTGTGGACTCGGATGAATCTGACGAATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
||
| CDS CCA 90 bp | CCTTGTGGCTGTGAAACTTGTGGCTCTGATGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGATCACATCCGACTGATCGGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCGCETCGSDVPGWL*NLLDYRSHPTDRHS Trigger: AGAGTGCCGATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCACAAGTTTCACAGCCACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
||
| CDS TCA 90 bp | GCTTGTGTACTAGCAGTGACGGTCTCATCAGACTCATCCGAATGGTaGGATTCGTCAGATTCATCCGAGTCCACAGAATCCTCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACVLAVTVSSDSSEW*DSSDSSESTESSLS Trigger: AGAGAGCGAGGATTCTGTGGACTCGGATGAATCTGACGAATCTCACCATTCGGATGAGTCTGATGAGACCGTCACTGCTAGTACACAAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
||
| CDS GCA 90 bp | GTGAGATTCGTCAGATTCATCCGAGTCCACAGAATCCTCGCTCTCTaGATGGTCTCCATCGTCATCATCATCGTCATCATCGTCGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRFVRFIRVHRILAL*MVSIVIIIVIIVVH Trigger: ATGGACGACGATGATGACGATGATGATGACGATGGAGACCATGCAGAGAGCGAGGATTCTGTGGACTCGGATGAATCTGACGAATCTCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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| CDS CCA 90 bp | GACTATCGATCACATCCGACTGATCGGCACTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTGTTTCCAGACTTGGTTCATCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: DYRSHPTDRHSPGSL*NAQVCVFPDLVHPA Trigger: AGCTGGATGAACCAAGTCTGGAAACACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGAGTGCCGATCAGTCGGATGTGATCGATAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTGTGTGTTTCCAGACTaGGTTCATCCAGCTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: QWPFAFLVQEEQKQSAEACVFPD*VHPADL Trigger: CAAGTCAGCTGGATGAACCAAGTCTGGAAACACACA...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTGTGTGTTTCCAGACTaGGTTCATCCAGCTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKCVFPD*VHPADL Trigger: CAAGTCAGCTGGATGAACCAAGTCTGGAAACACACA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | CAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTGGCTTTGGAACTTGCTaGACTATCGATCACATCCGA | + |
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Preference number: 5 (lower is better) Translates to: QWPFAFLVQEEQKQSAEAGFGTC*TIDHIR Trigger: TCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCC...AGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGGCTTTGGAACTTGCTaGACTATCGATCACATCCGA | + |
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Preference number: 5 (lower is better) Translates to: VAVCISCTGRTEAKCRSFGFGTC*TIDHIR Trigger: TCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCC...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGTGGCTTTCATTGGAATaGCTTGGAAGAGTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: CSGRLHFLYRKNRSKVQKWLSLE*LGRVSC Trigger: GCAAGAAACTCTTCCAAGCAATTCCAATGAAAGCCA...CTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTGTGTGTTTCCAGACTaGGTTCATCCAGCTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHCVFPD*VHPADL Trigger: CAAGTCAGCTGGATGAACCAAGTCTGGAAACACACA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGCTTTCATTGGAATaGCTTGGAAGAGTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: VAVCISCTGRTEAKCRSFWLSLE*LGRVSC Trigger: GCAAGAAACTCTTCCAAGCAATTCCAATGAAAGCCA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | AGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTGGTCATGGCTTTCATaGGAATTGCTTGGAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGRLHFLYRKNRSKVQKLWSWLS*ELLGRV Trigger: AACTCTTCCAAGCAATTCCAATGAAAGCCATGACCA...AAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | GTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTCATGGCTTTCATaGGAATTGCTTGGAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVCISCTGRTEAKCRSFWSWLS*ELLGRV Trigger: AACTCTTCCAAGCAATTCCAATGAAAGCCATGACCA...AAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAATGCAAACGGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGGCTTTGGAACTTGCTaGACTATCGATCACATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGGFGTC*TIDHIR Trigger: TCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCC...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGTTTGCATTGGTCATGGCTTTCATaGGAATTGCTTGGAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TGRTEAKCRSFWLQRCLHWSWLS*ELLGRV Trigger: AACTCTTCCAAGCAATTCCAATGAAAGCCATGACCA...ATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTGTACAGGAAGAACAGAAGCAAAGTGCAGAAGCTTTTGGTTACAACGGTGCTTGGAAGAGTTTCTaGCTTAAAGTCATCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLVQEEQKQSAEAFGYNGAWKSF*LKVILF Trigger: GAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAGC...ACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTCTGTTCTTCCTGTACAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCTACATACATATATCCACTGAACTGAGAAATGAGCAGTTAGTATTCCTGGGCTTTGGAACTTGCTaGACTATCGATCACATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLYIHISTELRNEQLVFLGFGTC*TIDHIR Trigger: TCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCC...CAGGAATACTAACTGCTCATTTCTCAGTTCAGTGGATATATGTATGTAGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | ATAACAATCATTAAAATGCAGTGGCCGTTTGCATTTCTTGTACAGGAAGAACAGGCTTGGAAGAGTTTCTaGCTTAAAGTCATCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ITIIKMQWPFAFLVQEEQAWKSF*LKVILF Trigger: GAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAGC...CTGTTCTTCCTGTACAAGAAATGCAAACGGCCACTGCATTTTAATGATTGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCTACATACATATATCCACTGAACTGAGAAATGAGCAGTTAGTATTCCTGGCTTGGAAGAGTTTCTaGCTTAAAGTCATCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLYIHISTELRNEQLVFLAWKSF*LKVILF Trigger: GAAAAGGATGACTTTAAGCAAGAAACTCTTCCAAGC...CAGGAATACTAACTGCTCATTTCTCAGTTCAGTGGATATATGTATGTAGAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS GCA 72 bp | CTGGGTGCAGGCTGTAAAGCTTCTTCTCCTCTGAGCTaGCAGAATCAGTCACTTTCACCGGGAGGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGAGCKASSPLS*QNQSLSPGGRR Trigger: CCTCCTCCCTCCCGGTGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGAAGCTTTACAGCCTGCACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000145084.8 |
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| CDS TCA 72 bp | GACACAGCATTCTGTGGCGCAAGGAGATTCTGCTTCTaGGATGGGTCAGGCACCAGCCATGTGGCTATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTAFCGARRFCF*DGSGTSHVAIG Trigger: TCCTATAGCCACATGGCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCTTGCGCCACAGAATGCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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| CDS TCA 72 bp | AGGATCTGGGTGCAGGCTGTAAAGCTTCTTCTCCTCTaGGCTGCCAGAATCAGTCACTTTCACCGGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: RIWVQAVKLLLL*AARISHFHREG Trigger: TCCCTCCCGGTGAAAGTGACTGATTCTGGCAGCTCAGAGGAGAAGAAGCTTTACAGCCTGCACCCAGATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000145084.8 |
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| CDS GCA 72 bp | CCAGACTTGGTTCATCCAGCTGACTTGACTCATGGCTaGCCTTTCCGTTGTTGTCCTGATCAGAGGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: PDLVHPADLTHG*PFRCCPDQRAC Trigger: GCATGCCCTCTGATCAGGACAACAACGGAAAGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CCA 72 bp | AGCATTCTGTGGCGCAAGGAGATTCTGCTTCTGAGATaGGTCAGGCACCAGCCATGTGGCTATAGGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SILWRKEILLLR*VRHQPCGYRIW Trigger: CCAGATCCTATAGCCACATGGCTGGTGCCTGACCCATCTCAGAAGCAGAATCTCCTTGCGCCACAGAATGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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| CDS TCA 72 bp | ACATCGAGGGACTCCTTAGACTCACCGCTCTTCATGTaGGAGGTGAGGTCCTCATCTGTGGCATCAGGATAC | + |
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Preference number: 6 (lower is better) Translates to: TSRDSLDSPLFM*EVRSSSVASGY Trigger: GTATCCTGATGCCACAGATGAGGACCTCACCTCTCACATGAAGAGCGGTGAGTCTAAGGAGTCCCTCGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CAA 72 bp | GTGGCTCTGATGTTCCAGGCTGGCTTTGGAACTTGCTaGACTATCGATCACATCCGACTGATCGGCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: VALMFQAGFGTC*TIDHIRLIGTL Trigger: GAGAGTGCCGATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS GCA 72 bp | CTTGTGGCTCTGATGTTCCAGGCTGGCTTTGGAACTTaGTTGACTATCGATCACATCCGACTGATCGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVALMFQAGFGT*LTIDHIRLIGT Trigger: AGTGCCGATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CAA 72 bp | ACTTGTGGCTCTGATGTTCCAGGCTGGCTTTGGAACTaGCTTGACTATCGATCACATCCGACTGATCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: TCGSDVPGWLWN*LDYRSHPTDRH Trigger: GTGCCGATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CAA 90 bp | TCTCCTGGCTCTCTTTGGAATGCTCAAGTCTGTGTGTTTCCAGACTaGGTTCATCCAGCTGACTTGACTCATGGCTGCCCTTTCCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPGSLWNAQVCVFPD*VHPADLTHGCPFRC Trigger: ACAACGGAAAGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGGAAACACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS TCA 72 bp | TCAAGTCTGTGTGTTTCCAGACTTGGTTCATCCAGCTaGCTTGACTCATGGCTGCCCTTTCCGTTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCVSRLGSSS*LDSWLPFPLLS Trigger: GGACAACAACGGAAAGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGGAAACACACAGACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CCA 72 bp | TCACATCCGACTGATCGGCACTCTCCTGGCTCTCTTTaGAATGCTCAAGTCTGTGTGTTTCCAGACTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SHPTDRHSPGSL*NAQVCVFPDLV Trigger: AACCAAGTCTGGAAACACACAGACTTGAGCATTCCAAAGAGAGCCAGGAGAGTGCCGATCAGTCGGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CAA 72 bp | GTCTGTGTGTTTCCAGACTTGGTTCATCCAGCTGACTaGACTCATGGCTGCCCTTTCCGTTGTTGTCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VCVFPDLVHPAD*THGCPFRCCPD Trigger: ATCAGGACAACAACGGAAAGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGGAAACACACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CAA 72 bp | TCTCTTTGGAATGCTCAAGTCTGTGTGTTTCCAGACTaGGTTCATCCAGCTGACTTGACTCATGGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLWNAQVCVFPD*VHPADLTHGCP Trigger: AGGGCAGCCATGAGTCAAGTCAGCTGGATGAACCAAGTCTGGAAACACACAGACTTGAGCATTCCAAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS TCA 72 bp | ATACTGTTCATCAGAAACCTGGAAACTCCTAGACTTTaGCCTCAGTCCATAAGCCAAGCTATCACCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILFIRNLETPRL*PQSISQAITSA Trigger: GGCCGAGGTGATAGCTTGGCTTATGGACTGAGGTCAAAGTCTAGGAGTTTCCAGGTTTCTGATGAACAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CCA 72 bp | TGTGAAACTTGTGGCTCTGATGTTCCAGGCTGGCTTTaGAACTTGCTTGACTATCGATCACATCCGACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CETCGSDVPGWL*NLLDYRSHPTD Trigger: ATCAGTCGGATGTGATCGATAGTCAAGCAAGTTCCAAAGCCAGCCTGGAACATCAGAGCCACAAGTTTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112747.2 ENSMUST00000112748.8 |
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| CDS CCA 72 bp | CCATCGTCATCATCATCGTCATCATCGTCGTCCATGTaGTCATGGCTTTCATTGGAATTGCTTGGAAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSSSSSSSM*SWLSLELLGRV Trigger: AACTCTTCCAAGCAATTCCAATGAAAGCCATGACCACATGGACGACGATGATGACGATGATGATGACGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031243.15 ENSMUST00000086833.13 ENSMUST00000112746.8 ENSMUST00000112747.2 ENSMUST00000112748.8 ENSMUST00000145084.8 |
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