Pregenerated sensors for SPOUT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039660Ensembl transcript IDs: ENSMUST00000100220.5
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAATGCCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTaGCCATCGAGAGCATCGAGCGGGCCTCGGGATTGCTCTTCGTGC | + |
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Preference number: 1 (lower is better) Translates to: PMPPWMRPSLWSGSW*PSRASSGPRDCSSC Trigger: GCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGGCATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 90 bp | TGCCCAATGCCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTaGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTGCTCTTCG | + |
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Preference number: 1 (lower is better) Translates to: CPMPPWMRPSLWSGS*CPSRASSGPRDCSS Trigger: CGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGGCATTGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 90 bp | GCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGTGGATaGGACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: ADRATFLRDAQCPRG*DHPSGAVPGAHREH Trigger: ATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR GCA 90 bp | AGCGGTTCCTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTaGTCTTCGTGCCCAATATTCTGGCTCGAGCTGGAAACCTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SGSWCPSRASSGPRD*SSCPIFWLELETSR Trigger: CCTTGAGGTTTCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 90 bp | AGTGCCCACACACTTCTTCAAGGTGCTGATCCTGGAGGCAGCCGGTaGGCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGT | + |
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Preference number: 1 (lower is better) Translates to: SAHTLLQGADPGGSR*ADRATFLRDAQCPR Trigger: ACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAGTGTGTGGGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 90 bp | TTGGGAAGAACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTaGTCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACG | + |
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Preference number: 1 (lower is better) Translates to: LGRTTWQCPHTSSRC*SWRQPVGRSSYVPT Trigger: CGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAGTGTGTGGGCACTGCCACGTGGTTCTTCCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 90 bp | CGCCCGGGTCTATCCACAGGACCGAGGCTGATGGGAAGTCCTATGTaGAGTACCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: RPGLSTGPRLMGSPM*STRLLGRTTWQCPH Trigger: GTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGGTACTTCACATAGGACTTCCCATCAGCCTCGGTCCTGTGGATAGACCCGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR GCA 90 bp | TGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTGCTCTTCGTaGCCAATATTCTGGCTCGAGCTGGAAACCTCAAGGCTATCACTG | + |
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Preference number: 1 (lower is better) Translates to: WCPSRASSGPRDCSS*PIFWLELETSRLSL Trigger: CAGTGATAGCCTTGAGGTTTCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 90 bp | GCCCAATATTCTGGCTCGAGCTGGAAACCTCAAGGCTATCACTGCTaGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: AQYSGSSWKPQGYHC*QQVMVEDSLEPLGR Trigger: TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATAGCCTTGAGGTTTCCAGCTCGAGCCAGAATATTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 90 bp | CAGGCCTCTTGGCCATGCGCCCGGGTCTATCCACAGGACCGAGGCTaGTGGGAAGTCCTATGTGAAGTACCAGGTTATTGGGAAGAACCA | + |
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Preference number: 1 (lower is better) Translates to: QASWPCARVYPQDRG*WEVLCEVPGYWEEP Trigger: TGGTTCTTCCCAATAACCTGGTACTTCACATAGGACTTCCCATCAGCCTCGGTCCTGTGGATAGACCCGGGCGCATGGCCAAGAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGTCCATCTCTACTCCCATaGTCCTCCTGTCCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GSRWADRATFLRDAQCPRPSLLP*SSCPAA Trigger: AGCAGCAGGACAGGAGGATCATGGGAGTAGAGATGG...ACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CAA 90 bp | GAGCGGTTCCTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATaGCTCTTCGTGCCCAATATTCTGGCTCGAGCTGGAAACCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ERFLVPIESIERASG*LFVPNILARAGNLK Trigger: CTTGAGGTTTCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGACCCAAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTTATGGTGGAGGACTCACTaGAGCCCCTGGGGAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: PDPRRHQAQHKLLACWKLWWRTH*SPWGDG Trigger: CCCATCTCCCCAGGGGCTCCAGTGAGTCCTCCACCA...TAACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTTGGGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTCCTGGAGGCAGCCGGTaGGCAGATCGAGCTACGTTC | + |
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Preference number: 2 (lower is better) Translates to: PGYWEEPRGSAHTLLQGAPGGSR*ADRATF Trigger: GAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGG...AGCACCTTGAAGAAGTGTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCTATGTGAAGTACCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACACACTCTGGAGCGGTTCCTaGTGCCCATCGAGAGCATCG | + |
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Preference number: 2 (lower is better) Translates to: VLCEVPGYWEEPRGSAHTLWSGS*CPSRAS Trigger: CGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAG...TGTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGGTACTTCACATAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGTGGAGCGGTTCCTGGTaGCCATCGAGAGCATCGAGC | + |
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Preference number: 2 (lower is better) Translates to: SCVYCLPFCLKQYWAEKQWSGSW*PSRASS Trigger: GCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCA...CTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTAAAGGCAGTTATTTTTaGAGAGAAGACTTGACCATC | + |
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Preference number: 2 (lower is better) Translates to: QGADPGGSRWADRATFLRKGSYF*REDLTI Trigger: GATGGTCAAGTCTTCTCTCCAAAAATAACTGCCTTT...ACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGATGAGACCATCCCTCTaGAGCGGTTCCTGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKMRPSL*SGSWCP Trigger: TGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCAT...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR TCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCCACAGGACCGAGGCTaGTGGGAAGTCCTATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKPQDRG*WEVLCE Trigger: TTCACATAGGACTTCCCATCAGCCTCGGTCCTGTGG...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR GCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCGGGATTGCTCTTCGTaGCCAATATTCTGGCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKRDCSS*PIFWLE Trigger: CTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCG...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGAGGTTAAGAACCACGTGGCAGTaGCCACACACTTCTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VYCLPFCLKQYWAEKQRLRTTWQ*PHTSSR Trigger: CCTTGAAGAAGTGTGTGGGCACTGCCACGTGGTTCT...TAACCTCTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGAGGTTAATGGGAAGTCCTATGTaGAGTACCAGGTTATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VYCLPFCLKQYWAEKQRLMGSPM*STRLLG Trigger: TCCCAATAACCTGGTACTTCACATAGGACTTCCCAT...TAACCTCTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 72 bp | CCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTaGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGAT | + |
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Preference number: 3 (lower is better) Translates to: PPWMRPSLWSGS*CPSRASSGPRD Trigger: ATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR GCA 72 bp | CCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTaGCCATCGAGAGCATCGAGCGGGCCTCGGGATTGC | + |
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Preference number: 3 (lower is better) Translates to: PWMRPSLWSGSW*PSRASSGPRDC Trigger: GCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 72 bp | AGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTaGTGCCCAATGCCCCCGTGGATGAGACCATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RQPVGRSSYVPT*CPMPPWMRPSL Trigger: GAGGGATGGTCTCATCCACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 72 bp | GCTACGTTCCTACGTGATGCCCAATGCCCCCGTGGATaGGACCATCCCTCTGGAGCGGTTCCTGGTGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: ATFLRDAQCPRG*DHPSGAVPGAH Trigger: ATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGGCATTGGGCATCACGTAGGAACGTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 72 bp | ACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTaGTCCTGGAGGCAGCCGGTGGGCAGATCGAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: TTWQCPHTSSRC*SWRQPVGRSSY Trigger: GTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAGTGTGTGGGCACTGCCACGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR GCA 72 bp | TGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTaGTCTTCGTGCCCAATATTCTGGCTCGAGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: WCPSRASSGPRD*SSCPIFWLELE Trigger: TTCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 72 bp | TCTGGCTCGAGCTGGAAACCTCAAGGCTATCACTGCTaGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SGSSWKPQGYHC*QQVMVEDSLEP Trigger: GGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATAGCCTTGAGGTTTCCAGCTCGAGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR-3UTR CAA 90 bp | CCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATTTTGGAGAGAAGACTaGACCATCTCTACTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: PPWMRPSLWSGSWCPSRAFWRED*TISTPM Trigger: CATGGGAGTAGAGATGGTCAAGTCTTCTCTCCAAAA...TGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 72 bp | TGGCCATGCGCCCGGGTCTATCCACAGGACCGAGGCTaGTGGGAAGTCCTATGTGAAGTACCAGGTTATTGG | + |
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Preference number: 3 (lower is better) Translates to: WPCARVYPQDRG*WEVLCEVPGYW Trigger: CCAATAACCTGGTACTTCACATAGGACTTCCCATCAGCCTCGGTCCTGTGGATAGACCCGGGCGCATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 72 bp | AGCGGGCCTCGGGATTGCTCTTCGTGCCCAATATTCTaGCTCGAGCTGGAAACCTCAAGGCTATCACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGPRDCSSCPIF*LELETSRLSLL Trigger: CAGCAGTGATAGCCTTGAGGTTTCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 72 bp | ACACTTCTTCAAGGTGCTGATCCTGGAGGCAGCCGGTaGGCAGATCGAGCTACGTTCCTACGTGATGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TLLQGADPGGSR*ADRATFLRDAQ Trigger: TTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR TCA 72 bp | CTATCCACAGGACCGAGGCTGATGGGAAGTCCTATGTaGAGTACCAGGTTATTGGGAAGAACCACGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LSTGPRLMGSPM*STRLLGRTTWQ Trigger: CTGCCACGTGGTTCTTCCCAATAACCTGGTACTTCACATAGGACTTCCCATCAGCCTCGGTCCTGTGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CCA 72 bp | GGAGATGGGCTGACTCACATTAAAGGCAGTTATTTTTaGAGAGAAGACTTGACCATCTCTACTCCCATGATC | + |
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Preference number: 3 (lower is better) Translates to: GDGLTHIKGSYF*REDLTISTPMI Trigger: GATCATGGGAGTAGAGATGGTCAAGTCTTCTCTCCAAAAATAACTGCCTTTAATGTGAGTCAGCCCATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR TCA 90 bp | ACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGAGCAGCCAGCGAGATaGGTATGGCCTCCTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TIPLERFLVPIESIERASEQPAR*VWPPRC Trigger: GCACCGAGGAGGCCATACTCATCTCGCTGGCTGCTC...CGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | ACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGAGGATGCGGGCCAGCTaGACACATGCCTGCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TIPLERFLVPIESIERASRMRAS*THACPF Trigger: GAAAGGGCAGGCATGTGTCCAGCTGGCCCGCATCCT...CGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | CCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATTGACCAAAGAGCCATaGCCTGCCTTGGTGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PPWMRPSLWSGSWCPSRALTKEP*PALVGR Trigger: CCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAA...TGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGTGTCTGGGAGCTGCTGCTaGTTCAGTCGCACGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: AAGGQIELRSYVMPNAPVSGSCC*FSRTVT Trigger: GGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGA...CACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATAGCTGGACACATGCCTaGCCTTTCTTGCCAACTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLWSGSWCPSRASSGPRDSWTHA*PFLPTP Trigger: GGGAGTTGGCAAGAAAGGGCAGGCATGTGTCCAGCT...ATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | GCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGTGGGCCAGCTGGACACATaGCTGCCCTTTCTTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: AAGGQIELRSYVMPNAPVGQLDT*LPFLAN Trigger: GTTGGCAAGAAAGGGCAGGCATGTGTCCAGCTGGCC...CACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CAA 72 bp | CTGGTGCCCATCGAGAGCATCGAGCGGGCCTCGGGATaGCTCTTCGTGCCCAATATTCTGGCTCGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LVPIESIERASG*LFVPNILARAG Trigger: TCCAGCTCGAGCCAGAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR TCA 90 bp | CTTCAAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTAGGTGCGGAGCTCAGGTaGCTGGGCATTGTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LQGADPGGSRWADRATFLGAELR*LGIVQD Trigger: ATCCTGGACAATGCCCAGTCACCTGAGCTCCGCACC...TAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | TATCACTGCTGGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGATGGGTGAGACCAGGCTaGAGAGCAGCCAGCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: YHCWQQVMVEDSLEPLGRWVRPG*RAASEM Trigger: CATCTCGCTGGCTGCTCTGCAGCCTGGTCTCACCCA...TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | GGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGATGCCCAATGCCCCCGTCATCCACACAGAAGATaGTGCAGGCTCTGGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: GSRWADRATFLRDAQCPRHPHRR*CRLWRS Trigger: AGATCGCCAGAGCCTGCACCATCTTCTGTGTGGATG...ACGGGGGCATTGGGCATCACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTGCTCTTCGTGCCCAATATTCCGGAGCTCAGGTGACTaGGCATTGTCCAGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: CPSRASSGPRDCSSCPIFRSSGD*ALSRME Trigger: CTCCATCCTGGACAATGCCCAGTCACCTGAGCTCCG...GAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTTAGGAAGGCTGGCCAGCCAGGTAGGTaGGGAGCTCAGGTGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: KEAPGPAQTSCLLEVRKAGQPGR*GAQVTG Trigger: CCCAGTCACCTGAGCTCCGCACCTACCTGGCTGGCC...AGCCTTCCTAACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | CCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTCAAAGAGCCATGGCCTaGCTTGGTGGGCCGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGYWEEPRGSAHTLLQGAQRAMA*LGGPVH Trigger: GTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTG...AGCACCTTGAAGAAGTGTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | CCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTGGGCATTGTCCAGGATaGAGCCTGGCAGGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGYWEEPRGSAHTLLQGAGHCPG*SLAGPH Trigger: GTGTGGCCCTGCCAGGCTCCATCCTGGACAATGCCC...AGCACCTTGAAGAAGTGTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | AAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGAGTCGAAGAGGACACTaGGGTCAGCCACTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVLILEAAGGQIELRSYVSRRGH*GQPLQG Trigger: ACCTTGAAGTGGCTGACCCCAGTGTCCTCTTCGACT...CACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | AAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCTACGTGCTCCTTCCACACTCTTaGTATCTTGGCCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVLILEAAGGQIELRSYVLLPHS*YLGPPH Trigger: ATGAGGAGGGCCAAGATACCAAGAGTGTGGAAGGAG...CACGTAGGAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | AGTGCCCACACACTTCTTCAAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATGCAAACTGCAGATCTTaGTGCTTGGGGAAGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAHTLLQGADPGGSRWADANCRS*CLGKNA Trigger: GGCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGC...ATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAGTGTGTGGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | AGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGCCTTGGTTGCTCCTCTaGGCCGCCGCCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCVYCLPFCLKQYWAEKQPWLLL*AAASSS Trigger: GGAGGAAGAGGCGGCGGCCCAGAGGAGCAACCAAGG...CTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TATCACTGCTGGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGAACACTCTTGGTATCTTaGCCCTCCTCATCGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: YHCWQQVMVEDSLEPLGRTLLVS*PSSSNT Trigger: GGTGTTCGATGAGGAGGGCCAAGATACCAAGAGTGT...TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TATCACTGCTGGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGAGTATGTCTTGCATTCTaGGAGCTGCTGCTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHCWQQVMVEDSLEPLGRVCLAF*ELLLVQ Trigger: CTGAACCAGCAGCAGCTCCCAGAATGCAAGACATAC...TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS-3UTR CCA 90 bp | CCAGACCCAAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTTAAGGTCGTACCCATCCTaGAAGGGAGCCTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PDPRRHQAQHKLLACWKLRSYPS*KGASAN Trigger: GTTTGCTGAGGCTCCCTTCCAGGATGGGTACGACCT...TAACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTTGGGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR TCA 90 bp | GTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGAGGTTATCGATCCCACCTGGGTaGGACCAGGCTGCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYCLPFCLKQYWAEKQRLSIPPG*DQAAEQ Trigger: CTGCTCTGCAGCCTGGTCTCACCCAGGTGGGATCGA...TAACCTCTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTTAGGAAGGCTTCCTCTTGGGCACGCTaGCGCTCCAGTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KEAPGPAQTSCLLEVRKASSWAR*RSSFFI Trigger: AATGAAGAAACTGGAGCGGCAGCGTGCCCAAGAGGA...AGCCTTCCTAACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGACCCAAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTTAACTGCAGATCTTGGTaGTTGGGGAAGAACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRPKEAPGPAQTSCLLEVNCRSW*LGKNAF Trigger: AAAGGCGTTCTTCCCCAAGCACCAAGATCTGCAGTT...AACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTTGGGTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGGTCCAGGATGGAGCCTaGCAGGGCCACACTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKVQDGA*QGHTQS Trigger: ACTCTGAGTGTGGCCCTGCCAGGCTCCATCCTGGAC...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCATTCTGGGAGCTGCTaGTGGTTCAGTCGCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKHSGSC*WFSRTV Trigger: GACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATG...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGTTAGCCTCTTCCTCTTaGGCACGCTGCCGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKLASSS*ARCRSS Trigger: ACTGGAGCGGCAGCGTGCCCAAGAGGAAGAGGCTAA...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR TCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGGGCTGTCCAAGGGGTTaGGGATTCCTGCAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKGCPRG*GFLQTA Trigger: TGCAGTTTGCAGGAATCCTCAACCCCTTGGACAGCC...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGTTGCATTCTGGGAGCTaGTGCTGGTTCAGTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKLHSGS*CWFSRT Trigger: CGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAA...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGAGTAGAGACCAGCTTTaGTGCGGGGGTCCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKSRDQL*CGGPVM Trigger: CATCACAGGACCCCCGCACCAAAGCTGGTCTCTACT...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CCA 90 bp | AGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGGCAGATCTTGGTGCTTaGGGAAGAACGCCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCVYCLPFCLKQYWAEKQADLGA*GRTPFS Trigger: TGAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGC...CTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| 3UTR CAA 72 bp | CTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATaGGGCAGAAAAGCAGAGGTTAAGCATTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLLPPILSEAV*GRKAEVKHWSP Trigger: TGGGGACCAATGCTTAACCTCTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGAGGATTCCTGCAAACTaGAGATCTTGGTGCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKRIPAN*RSWCLG Trigger: CCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCT...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR GCA 90 bp | ATTAAAGGCAGTTATTTTTGGAGAGAAGACTTGACCATCTCTACTCCCATGATCCCACACAGAAGATGGTaGAGGCTCTGGCGATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKGSYFWREDLTISTPMIPHRRW*RLWRSG Trigger: GCCAGATCGCCAGAGCCTGCACCATCTTCTGTGTGG...GATCATGGGAGTAGAGATGGTCAAGTCTTCTCTCCAAAAATAACTGCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR TCA 90 bp | GTCCTATGTGAAGTACCAGGTTATTGGGAAGAACCACGTGGCAGTGCCCACACAGTTTCTTCATTATCTTaGGGTCCTTCCACTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLCEVPGYWEEPRGSAHTVSSLS*GPSTSF Trigger: AAAAGAAGTGGAAGGACCTCAAGATAATGAAGAAAC...TGTGTGGGCACTGCCACGTGGTTCTTCCCAATAACCTGGTACTTCACATAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | GAAAGCGGGGAGGCGGGCCTCGATCCCACCTGGGTGAGACCAGGCTaGAGAGCAGCCAGCGAGATGAGTATGGCCTCCTCGGTGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESGEAGLDPTWVRPG*RAASEMSMASSVRM Trigger: CATCCGCACCGAGGAGGCCATACTCATCTCGCTGGCTGCTCTGCAGCCTGGTCTCACCCAGGTGGGATCGAGGCCCGCCTCCCCGCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS TCA 90 bp | CCTGAAGCTGGGCAGCTGGGCAGAGGCCACGTCGGAGCCACGTTCTaGTGTCCCAATGGTCAGGTCGTACCCATCCTGGAAGGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PEAGQLGRGHVGATF*CPNGQVVPILEGSL Trigger: GAGGCTCCCTTCCAGGATGGGTACGACCTGACCATTGGGACATCAGAACGTGGCTCCGACGTGGCCTCTGCCCAGCTGCCCAGCTTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | CACAGAAGATGGTGCAGGCTCTGGCGATCTGGCCAGCCAGGTAGGTaGGGAGCTCAGGTGACTGGGCATTGTCCAGGATGGAGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRRWCRLWRSGQPGR*GAQVTGHCPGWSLA Trigger: TGCCAGGCTCCATCCTGGACAATGCCCAGTCACCTGAGCTCCGCACCTACCTGGCTGGCCAGATCGCCAGAGCCTGCACCATCTTCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | CAGCCAGGTAGGTGCGGAGCTCAGGTGACTGGGCATTGTCCAGGATaGAGCCTGGCAGGGCCACACTCAGAGTGTAAGGCCGTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPGRCGAQVTGHCPG*SLAGPHSECKAVLG Trigger: ACCAAGGACGGCCTTACACTCTGAGTGTGGCCCTGCCAGGCTCCATCCTGGACAATGCCCAGTCACCTGAGCTCCGCACCTACCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TCCCAGACCCAAGGAGGCACCAGGCCCAGCACAAACTTCTTGCTTGTTGGAAGTGAGCCATGGCCTGCCTaGGTGGGCCGGTCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SQTQGGTRPSTNFLLVGSEPWPA*VGRSTT Trigger: CGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTC...ACTTCCAACAAGCAAGAAGTTTGTGCTGGGCCTGGTGCCTCCTTGGGTCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | GCAGCTGGGCAGAGGCCACGTCGGAGCCACGTTCTGATGTCCCAATaGTCAGGTCGTACCCATCCTGGAAGGGAGCCTCAGCAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGQRPRRSHVLMSQ*SGRTHPGREPQQTQ Trigger: CTGTGTTTGCTGAGGCTCCCTTCCAGGATGGGTACGACCTGACCATTGGGACATCAGAACGTGGCTCCGACGTGGCCTCTGCCCAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | TCGGAGCCACGTTCTGATGTCCCAATGGTCAGGTCGTACCCATCCTaGAAGGGAGCCTCAGCAAACACAGCGCTGAGGCAAGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SEPRSDVPMVRSYPS*KGASANTALRQEAS Trigger: GCTGGCCTCTTGCCTCAGCGCTGTGTTTGCTGAGGCTCCCTTCCAGGATGGGTACGACCTGACCATTGGGACATCAGAACGTGGCTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | GCCACTTCAAGGTTCGGGTCAGCATCCACTGCAGCTTCTAGCCCTTaGAGGCCTCCAAACACCACAAGGGCATGCCTGAAGCTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATSRFGSASTAASSP*RPPNTTRACLKLGS Trigger: GCTGCCCAGCTTCAGGCATGCCCTTGTGGTGTTTGGAGGCCTCCAAGGGCTAGAAGCTGCAGTGGATGCTGACCCGAACCTTGAAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TGCCCATCGAGAGCATCGAGCGGGCCTCGGGATTGCTCTTCGTGCCCAATATTCTCAGGTGACTGGGCATaGTCCAGGATGGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSRASSGPRDCSSCPIFSGDWA*SRMEPG Trigger: GCCAGGCTCCATCCTGGACAATGCCCAGTCACCTGA...GAATATTGGGCACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | CCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCATGCAAACTGCAGATCTaGGTGCTTGGGGAAGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PPWMRPSLWSGSWCPSRACKLQI*VLGEER Trigger: GCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCA...TGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | CTTGGCCCTCCTCATCGAACACCACAATCTCATCCACACAGAAGATaGTGCAGGCTCTGGCGATCTGGCCAGCCAGGTAGGTGCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHRTPQSHPHRR*CRLWRSGQPGRCGA Trigger: AGCTCCGCACCTACCTGGCTGGCCAGATCGCCAGAGCCTGCACCATCTTCTGTGTGGATGAGATTGTGGTGTTCGATGAGGAGGGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | CCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTGCCCATCGAGAGCAGTTCCTTTGTATGTCTaGCATTCTGGGAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPWMRPSLWSGSWCPSRAVPLYV*HSGSCC Trigger: GCAGCAGCTCCCAGAATGCAAGACATACAAAGGAAC...TGCTCTCGATGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | AGAACGCCTTTCTCAGGTACTGTGGACACTCCAGGTACTGTAGGATaGGGGCCAGCTGGACACATGCCTGCCCTTTCTTGCCAACTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTPFSGTVDTPGTVG*GPAGHMPALSCQLP Trigger: GGGGAGTTGGCAAGAAAGGGCAGGCATGTGTCCAGCTGGCCCGCATCCTACAGTACCTGGAGTGTCCACAGTACCTGAGAAAGGCGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | GCCGCCGCCTCTTCCTCCTCTTCCTGGCGTTTAGCCTCTTCCTCTTaGGCACGCTGCCGCTCCAGTTTCTTCATTATCTTGAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAASSSSSWRLASSS*ARCRSSFFIILRSF Trigger: GAAGGACCTCAAGATAATGAAGAAACTGGAGCGGCAGCGTGCCCAAGAGGAAGAGGCTAAACGCCAGGAAGAGGAGGAAGAGGCGGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS TCA 90 bp | TGCGGGCCAGCTGGACACATGCCTGCCCTTTCTTGCCAACTCCCCTaGATTCTCCTTCCACACTCTTGGTATCTTGGCCCTCCTCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: CGPAGHMPALSCQLP*ILLPHSWYLGPPHR Trigger: TCGATGAGGAGGGCCAAGATACCAAGAGTGTGGAAGGAGAATTCAGGGGAGTTGGCAAGAAAGGGCAGGCATGTGTCCAGCTGGCCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | CTTCACCTCCTTCTTCATTCCACAGTTGACCAAAGAGCCATGGCCTaGCTTGGTGGGCCGGTCCACCACGACGCCTTCTCGAAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHLLLHSTVDQRAMA*LGGPVHHDAFSKLR Trigger: TCTGAGTTTCGAGAAGGCGTCGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | GGCAAGAGGCCAGCCGGACAGTGTAGCCCCAGTAGAGACCAGCTTTaGTGCGGGGGTCCTGTGATGACACAACTGTTCCTTTGTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKRPAGQCSPSRDQL*CGGPVMTQLFLCMS Trigger: AGACATACAAAGGAACAGTTGTGTCATCACAGGACCCCCGCACCAAAGCTGGTCTCTACTGGGGCTACACTGTCCGGCTGGCCTCTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTCAAGGTGCTGATCCTGGAGGCAGCCGGTGGGCAGATCGAGCTACGTTCCATGCCTGCCCTTTCTaGCCAACTCCCCTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQGADPGGSRWADRATFHACPF*PTPLNS Trigger: AGAATTCAGGGGAGTTGGCAAGAAAGGGCAGGCATG...GAACGTAGCTCGATCTGCCCACCGGCTGCCTCCAGGATCAGCACCTTGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TATCACTGCTGGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGATGCAGATCTTGGTGCTaGGGGAAGAACGCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YHCWQQVMVEDSLEPLGRCRSWC*GKNAFL Trigger: GAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGCA...TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS GCA 90 bp | GGGCTGTCCAAGGGGTTGAGGATTCCTGCAAACTGCAGATCTTGGTaGTTGGGGAAGAACGCCTTTCTCAGGTACTGTGGACACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSKGLRIPANCRSW*LGKNAFLRYCGHSR Trigger: CCTGGAGTGTCCACAGTACCTGAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCTCAACCCCTTGGACAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | TGGTGCGGGGGTCCTGTGATGACACAACTGTTCCTTTGTATGTCTTaGATTCTGGGAGCTGCTGCTGGTTCAGTCGCACGGTCACCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: WCGGPVMTQLFLCMS*ILGAAAGSVARSPE Trigger: TTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATCACAGGACCCCCGCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS CCA 90 bp | TCAATCTTCACCTCCTTCTTCATTCCACAGTTGACCAAAGAGCCATaGCCTGCCTTGGTGGGCCGGTCCACCACGACGCCTTCTCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIFTSFFIPQLTKEP*PALVGRSTTTPSRN Trigger: GTTTCGAGAAGGCGTCGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAGATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
||
| CDS TCA 90 bp | GGTCCAGTTTCTTGTCAATCTTCACCTCCTTCTTCATTCCACAGTTaGCCAAAGAGCCATGGCCTGCCTTGGTGGGCCGGTCCACCACGA | + |
|
Preference number: 5 (lower is better) Translates to: GPVSCQSSPPSSFHS*PKSHGLPWWAGPPR Trigger: TCGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAGATTGACAAGAAACTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TATCACTGCTGGCAGCAAGTGATGGTGGAGGACTCACTGGAGCCCCTGGGGAGATTCTTCATTCCACAGTaGACCAAAGAGCCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: YHCWQQVMVEDSLEPLGRFFIPQ*TKEPWP Trigger: AGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAA...TCTCCCCAGGGGCTCCAGTGAGTCCTCCACCATCACTTGCTGCCAGCAGTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | GATGACACAACTGTTCCTTTGTATGTCTTGCATTCTGGGAGCTGCTaGTGGTTCAGTCGCACGGTCACCCGAAGTCCAGGGTCCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: DDTTVPLYVLHSGSC*WFSRTVTRSPGSSF Trigger: GAAACTGGACCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 90 bp | TGTGATGACACAACTGTTCCTTTGTATGTCTTGCATTCTGGGAGCTaGTGCTGGTTCAGTCGCACGGTCACCCGAAGTCCAGGGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CDDTTVPLYVLHSGS*CWFSRTVTRSPGSS Trigger: ACTGGACCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 90 bp | GACACAACTGTTCCTTTGTATGTCTTGCATTCTGGGAGCTGCTGCTaGTTCAGTCGCACGGTCACCCGAAGTCCAGGGTCCAGTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: DTTVPLYVLHSGSCC*FSRTVTRSPGSSFL Trigger: CAAGAAACTGGACCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TGCCCAATGCCCCCGTGGATGAGACCATCCCTCTGGAGCGGTTCCTGGTGCCCAAGTTTCTTCATTATCTaGAGGTCCTTCCACTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CPMPPWMRPSLWSGSWCPSFFII*RSFHFF Trigger: AAAGAAGTGGAAGGACCTCAAGATAATGAAGAAACT...TGGGCACCAGGAACCGCTCCAGAGGGATGGTCTCATCCACGGGGGCATTGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | TCTAGCTGCGTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCACACTCTTGGTATCTaGGCCCTCCTCATCGAACAC | + |
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Preference number: 5 (lower is better) Translates to: SSCVYCLPFCLKQYWAEKHTLGI*ALLIEH Trigger: GTGTTCGATGAGGAGGGCCAAGATACCAAGAGTGTG...CTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAACGCAGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | ATTAAAGGCAGTTATTTTTGGAGAGAAGACTTGACCATCTCTACTCCCATGATCGGGCTGTCCAAGGGGTaGAGGATTCCTGCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: IKGSYFWREDLTISTPMIGLSKG*RIPANC Trigger: GCAGTTTGCAGGAATCCTCAACCCCTTGGACAGCCC...GATCATGGGAGTAGAGATGGTCAAGTCTTCTCTCCAAAAATAACTGCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS-3UTR CAA 90 bp | GTTTATTGCCTCCCATTCTGTCTGAAGCAGTATTGGGCAGAAAAGCAGAGGTTACCAGGGTCCAGTTTCTaGTCAATCTTCACCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VYCLPFCLKQYWAEKQRLPGSSF*SIFTSF Trigger: GAAGGAGGTGAAGATTGACAAGAAACTGGACCCTGG...TAACCTCTGCTTTTCTGCCCAATACTGCTTCAGACAGAATGGGAGGCAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS TCA 72 bp | GGGCAGCTGGGCAGAGGCCACGTCGGAGCCACGTTCTaGTGTCCCAATGGTCAGGTCGTACCCATCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GQLGRGHVGATF*CPNGQVVPILE Trigger: TTCCAGGATGGGTACGACCTGACCATTGGGACATCAGAACGTGGCTCCGACGTGGCCTCTGCCCAGCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | AGGTGCGGAGCTCAGGTGACTGGGCATTGTCCAGGATaGAGCCTGGCAGGGCCACACTCAGAGTGTAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RCGAQVTGHCPG*SLAGPHSECKA Trigger: GGCCTTACACTCTGAGTGTGGCCCTGCCAGGCTCCATCCTGGACAATGCCCAGTCACCTGAGCTCCGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | CTTCTTCATTCCACAGTTGACCAAAGAGCCATGGCCTaGCTTGGTGGGCCGGTCCACCACGACGCCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLHSTVDQRAMA*LGGPVHHDAFS Trigger: CGAGAAGGCGTCGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | CCACAATCTCATCCACACAGAAGATGGTGCAGGCTCTaGCGATCTGGCCAGCCAGGTAGGTGCGGAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PQSHPHRRWCRL*RSGQPGRCGAQ Trigger: CTGAGCTCCGCACCTACCTGGCTGGCCAGATCGCCAGAGCCTGCACCATCTTCTGTGTGGATGAGATTGTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | ACCTCCTTCTTCATTCCACAGTTGACCAAAGAGCCATaGCCTGCCTTGGTGGGCCGGTCCACCACGACGCCT | + |
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Preference number: 6 (lower is better) Translates to: TSFFIPQLTKEP*PALVGRSTTTP Trigger: AGGCGTCGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | CCAGCCGGACAGTGTAGCCCCAGTAGAGACCAGCTTTaGTGCGGGGGTCCTGTGATGACACAACTGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PAGQCSPSRDQL*CGGPVMTQLFL Trigger: AAGGAACAGTTGTGTCATCACAGGACCCCCGCACCAAAGCTGGTCTCTACTGGGGCTACACTGTCCGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | AGGTTCGGGTCAGCATCCACTGCAGCTTCTAGCCCTTaGAGGCCTCCAAACACCACAAGGGCATGCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RFGSASTAASSP*RPPNTTRACLK Trigger: CTTCAGGCATGCCCTTGTGGTGTTTGGAGGCCTCCAAGGGCTAGAAGCTGCAGTGGATGCTGACCCGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | TTCTCAGGTACTGTGGACACTCCAGGTACTGTAGGATaGGGGCCAGCTGGACACATGCCTGCCCTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FSGTVDTPGTVG*GPAGHMPALSC Trigger: GCAAGAAAGGGCAGGCATGTGTCCAGCTGGCCCGCATCCTACAGTACCTGGAGTGTCCACAGTACCTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | GTTCCTTTGTATGTCTTGCATTCTGGGAGCTGCTGCTaGTTCAGTCGCACGGTCACCCGAAGTCCAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VPLYVLHSGSCC*FSRTVTRSPGS Trigger: GGACCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | CGTTCTGATGTCCCAATGGTCAGGTCGTACCCATCCTaGAAGGGAGCCTCAGCAAACACAGCGCTGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RSDVPMVRSYPS*KGASANTALRQ Trigger: TTGCCTCAGCGCTGTGTTTGCTGAGGCTCCCTTCCAGGATGGGTACGACCTGACCATTGGGACATCAGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 72 bp | AGGATGCGGGCCAGCTGGACACATGCCTGCCCTTTCTaGCCAACTCCCCTGAATTCTCCTTCCACACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RMRASWTHACPF*PTPLNSPSTLL Trigger: CAAGAGTGTGGAAGGAGAATTCAGGGGAGTTGGCAAGAAAGGGCAGGCATGTGTCCAGCTGGCCCGCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 90 bp | GGGTCCAGTTTCTTGTCAATCTTCACCTCCTTCTTCATTCCACAGTaGACCAAAGAGCCATGGCCTGCCTTGGTGGGCCGGTCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: GSSFLSIFTSFFIPQ*TKEPWPALVGRSTT Trigger: CGTGGTGGACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAGATTGACAAGAAACTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 90 bp | TTGGTGCGGGGGTCCTGTGATGACACAACTGTTCCTTTGTATGTCTaGCATTCTGGGAGCTGCTGCTGGTTCAGTCGCACGGTCACCCGA | + |
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Preference number: 6 (lower is better) Translates to: LVRGSCDDTTVPLYV*HSGSCCWFSRTVTR Trigger: TCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATCACAGGACCCCCGCACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | CATGTGGTGAGGGCTGTCCAAGGGGTTGAGGATTCCTaGAAACTGCAGATCTTGGTGCTTGGGGAAGAACGC | + |
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Preference number: 6 (lower is better) Translates to: HVVRAVQGVEDS*KLQILVLGEER Trigger: GCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCTCAACCCCTTGGACAGCCCTCACCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | ACTGTTCCTTTGTATGTCTTGCATTCTGGGAGCTGCTaGTGGTTCAGTCGCACGGTCACCCGAAGTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVPLYVLHSGSC*WFSRTVTRSPG Trigger: CCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 90 bp | AGGTACTGTAGGATGCGGGCCAGCTGGACACATGCCTGCCCTTTCTaGCCAACTCCCCTGAATTCTCCTTCCACACTCTTGGTATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RYCRMRASWTHACPF*PTPLNSPSTLLVSW Trigger: CCAAGATACCAAGAGTGTGGAAGGAGAATTCAGGGGAGTTGGCAAGAAAGGGCAGGCATGTGTCCAGCTGGCCCGCATCCTACAGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 90 bp | GTGAGGGCTGTCCAAGGGGTTGAGGATTCCTGCAAACTGCAGATCTaGGTGCTTGGGGAAGAACGCCTTTCTCAGGTACTGTGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: VRAVQGVEDSCKLQI*VLGEERLSQVLWTL Trigger: GAGTGTCCACAGTACCTGAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCTCAACCCCTTGGACAGCCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS TCA 72 bp | TCTTGTCAATCTTCACCTCCTTCTTCATTCCACAGTTaGCCAAAGAGCCATGGCCTGCCTTGGTGGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SCQSSPPSSFHS*PKSHGLPWWAG Trigger: ACCGGCCCACCAAGGCAGGCCATGGCTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAGATTGACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | ACAACTGTTCCTTTGTATGTCTTGCATTCTGGGAGCTaGTGCTGGTTCAGTCGCACGGTCACCCGAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TTVPLYVLHSGS*CWFSRTVTRSP Trigger: TGGACTTCGGGTGACCGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | TCTTCCTCCTCTTCCTGGCGTTTAGCCTCTTCCTCTTaGGCACGCTGCCGCTCCAGTTTCTTCATTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSWRLASSS*ARCRSSFFIIL Trigger: CAAGATAATGAAGAAACTGGAGCGGCAGCGTGCCCAAGAGGAAGAGGCTAAACGCCAGGAAGAGGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 72 bp | GGGTCCTGTGATGACACAACTGTTCCTTTGTATGTCTaGCATTCTGGGAGCTGCTGCTGGTTCAGTCGCACG | + |
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Preference number: 6 (lower is better) Translates to: GSCDDTTVPLYV*HSGSCCWFSRT Trigger: CGTGCGACTGAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATCACAGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 72 bp | TTGGTGCGGGGGTCCTGTGATGACACAACTGTTCCTTaGTATGTCTTGCATTCTGGGAGCTGCTGCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LVRGSCDDTTVP*YVLHSGSCCWF Trigger: GAACCAGCAGCAGCTCCCAGAATGCAAGACATACAAAGGAACAGTTGTGTCATCACAGGACCCCCGCACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 90 bp | TGCTGGTTCAGTCGCACGGTCACCCGAAGTCCAGGGTCCAGTTTCTaGTCAATCTTCACCTCCTTCTTCATTCCACAGTTGACCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CWFSRTVTRSPGSSF*SIFTSFFIPQLTKE Trigger: CTCTTTGGTCAACTGTGGAATGAAGAAGGAGGTGAAGATTGACAAGAAACTGGACCCTGGACTTCGGGTGACCGTGCGACTGAACCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS GCA 72 bp | AAGGGGTTGAGGATTCCTGCAAACTGCAGATCTTGGTaGTTGGGGAAGAACGCCTTTCTCAGGTACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: KGLRIPANCRSW*LGKNAFLRYCG Trigger: TCCACAGTACCTGAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCTCAACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | TTTTTCTGCTGTTTCCATTTTCGCCATTCAACCCTTTaGCCATGTTCACCCGGACCACACGGACGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFCCFHFRHSTL*PCSPGPHGRFL Trigger: GAGGAAGCGTCCGTGTGGTCCGGGTGAACATGGCCAAAGGGTTGAATGGCGAAAATGGAAACAGCAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | TCCAAGGGGTTGAGGATTCCTGCAAACTGCAGATCTTaGTGCTTGGGGAAGAACGCCTTTCTCAGGTACTGT | + |
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Preference number: 6 (lower is better) Translates to: SKGLRIPANCRS*CLGKNAFLRYC Trigger: ACAGTACCTGAGAAAGGCGTTCTTCCCCAAGCACCAAGATCTGCAGTTTGCAGGAATCCTCAACCCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CAA 72 bp | AGTCGCACGGTCACCCGAAGTCCAGGGTCCAGTTTCTaGTCAATCTTCACCTCCTTCTTCATTCCACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRTVTRSPGSSF*SIFTSFFIPQL Trigger: CAACTGTGGAATGAAGAAGGAGGTGAAGATTGACAAGAAACTGGACCCTGGACTTCGGGTGACCGTGCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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| CDS CCA 72 bp | ACTCCCCTGAATTCTCCTTCCACACTCTTGGTATCTTaGCCCTCCTCATCGAACACCACAATCTCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: TPLNSPSTLLVS*PSSSNTTISST Trigger: TGTGGATGAGATTGTGGTGTTCGATGAGGAGGGCCAAGATACCAAGAGTGTGGAAGGAGAATTCAGGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100220.5 |
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