Pregenerated sensors for SPOPFM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074424Ensembl transcript IDs: ENSMUST00000161475.2, ENSMUST00000167916.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTATAAATCACACTGCAAGTTCCAACAGACAAGGTTTTATGCTTaGTCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGT | + |
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Preference number: 1 (lower is better) Translates to: FYKSHCKFQQTRFYA*SILCSGLQSSLLHS Trigger: ACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGATCAAGCATAAAACCTTGTCTGTTGGAACTTGCAGTGTGATTTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCGCTGAACCACCATGCTaGCTTTTCCCAGGCACACTA | + |
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Preference number: 2 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLAEPPC*LFPGTL Trigger: TAGTGTGCCTGGGAAAAGGCAGCATGGTGGTTCAGC...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR GCA 90 bp | AGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACAGCTGTGCTGAACCACCATGCTaGCTTTTCCCAGGCACACTA | + |
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Preference number: 2 (lower is better) Translates to: SRLPRLHPQPTILTYNSCAEPPC*LFPGTL Trigger: TAGTGTGCCTGGGAAAAGGCAGCATGGTGGTTCAGC...ACAGCTGTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGACTGGGGTTAGGAGCATaGAATACCACACCTACTATA | + |
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Preference number: 2 (lower is better) Translates to: CISSALHWLNTCSFPVLRLGLGA*NTTPTI Trigger: TATAGTAGGTGTGGTATTTCATGCTCCTAACCCCAG...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAAGCTGTTTTAAATGCTaGACCACCATGCTGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CISSALHWLNTCSFPVLRSCFKC*TTMLPF Trigger: AAAAGGCAGCATGGTGGTTCAGCATTTAAAACAGCT...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAACAAGGTTTTATGCTTaGTCTATCCTTTGCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CISSALHWLNTCSFPVLRTRFYA*SILCSG Trigger: CCCAGAGCAAAGGATAGATCAAGCATAAAACCTTGT...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTGCAGACAGGTTTCTCTaGAGAAACTCGGGATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TDIITHNVNFFSVSPGWGADRFL*RNSGLS Trigger: AGACAATCCCGAGTTTCTTCAGAGAAACCTGTCTGC...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAAGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACACTGGTTATAGCTGTTaGAAGACAGATGTTGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MSSRLPRLHPQPTILTYNTGYSC*KTDVGH Trigger: ATGACCAACATCTGTCTTCCAACAGCTATAACCAGT...GTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACTTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTAGCTGTTTTAAATGCTaGACCACCATGCTGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TDIITHNVNFFSVSPGWGSCFKC*TTMLPF Trigger: AAAAGGCAGCATGGTGGTTCAGCATTTAAAACAGCT...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGATGCTTGATCTATCCTTaGCTCTGGGCTCCAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: CISSALHWLNTCSFPVLRCLIYP*LWAPVI Trigger: GATGACTGGAGCCCAGAGCAAAGGATAGATCAAGCA...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTTGTTGTAGCTACCTCAGTGCTGGGGTTAGGAGCATGAAATACCACACCGTTGGAAGACAGATGTaGGTCATAGCTGTCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SFCCSYLSAGVRSMKYHTVGRQM*VIAVHP Trigger: GGGATGGACAGCTATGACCAACATCTGTCTTCCAAC...GGTGTGGTATTTCATGCTCCTAACCCCAGCACTGAGGTAGCTACAACAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR CCA 72 bp | CCAGAAATCAGTGGTAACAACACTGGTTATAGCTGTTaGAAGACAGATGTTGGTCATAGCTGTCCATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: PEISGNNTGYSC*KTDVGHSCPSP Trigger: AGGGGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAGTGTTGTTACCACTGATTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR CCA 72 bp | TTGAAGGATATAGCATGCATTTCCTCAGCCCTGCACTaGCTCAATACATGTTCATTTCCTGTCCTGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LKDIACISSALH*LNTCSFPVLRG Trigger: TCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCATGCTATATCCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR TCA 72 bp | CCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTaGGAGGACTCTTCACTCTCAGCTGTTCATAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: PCTGSIHVHFLS*EDSSLSAVHKN Trigger: ATTTTTATGAACAGCTGAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTGTTGGAAGACAGATGTaGGTCATAGCTGTCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: TDIITHNVNFFSVSPGWGVGRQM*VIAVHP Trigger: GGGATGGACAGCTATGACCAACATCTGTCTTCCAAC...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| 3UTR GCA 72 bp | ATGGCCTACAAGATAGTTGTTTTGAAGGATATAGCATaGATTTCCTCAGCCCTGCACTGGCTCAATACATGT | + |
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Preference number: 3 (lower is better) Translates to: MAYKIVVLKDIA*ISSALHWLNTC Trigger: ACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCATGCTATATCCTTCAAAACAACTATCTTGTAGGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCTCACAGGCCATGGAGTaGATGTGGAGGTGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLSQAME*MWRCGA Trigger: GGCGCCACACCTCCACATTCACTCCATGGCCTGTGA...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | TCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGTCTAAATGCAGACTCACAGGCCATGGAGTaGATGTGGAGGTGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SILCSGLQSSLLHSLNADSQAME*MWRCGA Trigger: GGCGCCACACCTCCACATTCACTCCATGGCCTGTGA...GTCTGCATTTAGACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCATGAAATCCAGGGCCTaGGTCTTCAGCTGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLMKSRA*VFSCCV Trigger: CACACAGCAGCTGAAGACTCAGGCCCTGGATTTCAT...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCAGGGAGGAGCCAAGGTaGATTGGAGAGGAGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLREEPR*IGEEEI Trigger: GATTTCCTCCTCTCCAATCCACCTTGGCTCCTCCCT...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | CTGGTTATAGCTGTTGGAAGACAGATGTTGGTCATAGCTGTCCATCCCCTAAACATGAAATCCAGGGCCTaGGTCTTCAGCTGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVIAVGRQMLVIAVHPLNMKSRA*VFSCCV Trigger: CACACAGCAGCTGAAGACTCAGGCCCTGGATTTCAT...GTTTAGGGGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTTGTTGTAGCTACCTCAGTGCTGGGGTTAGGAGCATGAAATACCACACCACAGGCAGCAGTCTGTaGACAGGGAATTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: SFCCSYLSAGVRSMKYHTTGSSL*TGNSPT Trigger: TGTGGGAGAATTCCCTGTGCACAGACTGCTGCCTGT...GGTGTGGTATTTCATGCTCCTAACCCCAGCACTGAGGTAGCTACAACAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | TCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGTCTAAATGCAGACCCATCAAGCCCTCCATaGCATACCTGTCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SILCSGLQSSLLHSLNADPSSPP*HTCQQL Trigger: CAGCTGCTGACAGGTATGGCATGGAGGGCTTGATGG...GTCTGCATTTAGACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCGCAGAAGCCAGGAAGTaGAATGCTTCAGCTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLAEARK*NASATK Trigger: CTTGGTAGCTGAAGCATTCCACTTCCTGGCTTCTGC...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | ATGTCAAGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACAGGGAGGAGCCAAGGTaGATTGGAGAGGAGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: MSSRLPRLHPQPTILTYNREEPR*IGEEEI Trigger: GATTTCCTCCTCTCCAATCCACCTTGGCTCCTCCCT...GTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | AGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACAGCTGTGTCACTGGCCTCCAGTaGGAATTTTGGGCTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: SRLPRLHPQPTILTYNSCVTGLQ*EFWACN Trigger: ATTACAAGCCCAAAATTCTCACTGGAGGCCAGTGAC...ACAGCTGTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | ATGTCAAGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACGTCACTGGCCTCCAGTaGGAATTTTGGGCTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: MSSRLPRLHPQPTILTYNVTGLQ*EFWACN Trigger: ATTACAAGCCCAAAATTCTCACTGGAGGCCAGTGAC...GTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACTTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | AGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACAGCTGTCAGACCTTAGAAGCATaGAGTGCAATGAAATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRLPRLHPQPTILTYNSCQTLEA*SAMKSR Trigger: CCTGGATTTCATTGCACTTCATGCTTCTAAGGTCTG...ACAGCTGTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTTGTTGTAGCTACCTCAGTGCTGGGGTTAGGAGCATGAAATACCACACCCCAGAACTCATACTTTaGCCAAACTGGGCTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SFCCSYLSAGVRSMKYHTPELIL*PNWALL Trigger: CAAAAGAGCCCAGTTTGGGCAAAGTATGAGTTCTGG...GGTGTGGTATTTCATGCTCCTAACCCCAGCACTGAGGTAGCTACAACAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | CTGGTTATAGCTGTTGGAAGACAGATGTTGGTCATAGCTGTCCATCCCCTAAACCCAGAACTCATACTTTaGCCAAACTGGGCTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LVIAVGRQMLVIAVHPLNPELIL*PNWALL Trigger: CAAAAGAGCCCAGTTTGGGCAAAGTATGAGTTCTGG...GTTTAGGGGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | AACAACACTGGTTATAGCTGTTGGAAGACAGATGTTGGTCATAGCTGTCCATCCGCTTCAGCTACCAAGTaGGGATTTGACTCCACCATT | + |
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Preference number: 4 (lower is better) Translates to: NNTGYSCWKTDVGHSCPSASATK*GFDSTI Trigger: AATGGTGGAGTCAAATCCCCACTTGGTAGCTGAAGC...GGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAGTGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCCTGACAGGTAATCTTTaGTTTCTTCATCACTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLLTGNL*FLHHFR Trigger: ACGGAAGTGATGAAGAAAGCAAAGATTACCTGTCAG...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR GCA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGACTGACAGGTAATCTTTaGTTTCTTCATCACTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: CISSALHWLNTCSFPVLRLTGNL*FLHHFR Trigger: ACGGAAGTGATGAAGAAAGCAAAGATTACCTGTCAG...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGATCCATCCATGAAAAATaGAAAGTTGCTAATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CISSALHWLNTCSFPVLRSIHEK*KVANGP Trigger: TGGACCATTAGCAACTTTTCATTTTTCATGGATGGA...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | TCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGTCTAAATGCAGACGTCCTCTCCATACTTTaGTATTTCTCTCCTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SILCSGLQSSLLHSLNADVLSIL*YFSPWE Trigger: TTCCCAAGGAGAGAAATATCAAAGTATGGAGAGGAC...GTCTGCATTTAGACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | AACAACACTGGTTATAGCTGTTGGAAGACAGATGTTGGTCATAGCTGTCCATCCTGCAATCATGTGTCTTaGATCCTTGATTGCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NNTGYSCWKTDVGHSCPSCNHVS*ILDCRC Trigger: ACACCTGCAATCAAGGATCCAAGACACATGATTGCA...GGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAGTGTTGTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTGCAGAAGCCAGGAAGTaGAATGCTTCAGCTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: TDIITHNVNFFSVSPGWGAEARK*NASATK Trigger: CTTGGTAGCTGAAGCATTCCACTTCCTGGCTTCTGC...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | AGTAGACTGCCCAGACTCCATCCCCAACCCACCATTTTAACATATAACAGCTGTTCCATCCATGAAAAATaGAAAGTTGCTAATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SRLPRLHPQPTILTYNSCSIHEK*KVANGP Trigger: TGGACCATTAGCAACTTTTCATTTTTCATGGATGGA...ACAGCTGTTATATGTTAAAATGGTGGGTTGGGGATGGAGTCTGGGCAGTCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTGTCCTCTCCATACTTTaGTATTTCTCTCCTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TDIITHNVNFFSVSPGWGVLSIL*YFSPWE Trigger: TTCCCAAGGAGAGAAATATCAAAGTATGGAGAGGAC...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | TTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCAGCTGTTCATAAAAATAATTCAGACCTTAGAAGCATaGAGTGCAATGAAATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FISCPERTLHSQLFIKIIQTLEA*SAMKSR Trigger: CCTGGATTTCATTGCACTTCATGCTTCTAAGGTCTG...AATTATTTTTATGAACAGCTGAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTTGCAATCATGTGTCTTaGATCCTTGATTGCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TDIITHNVNFFSVSPGWGCNHVS*ILDCRC Trigger: ACACCTGCAATCAAGGATCCAAGACACATGATTGCA...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR TCA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTCTCCTTGGGAATTTATaGTCCAGAACTCATACTTTG | + |
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Preference number: 4 (lower is better) Translates to: TDIITHNVNFFSVSPGWGLLGNL*SRTHTL Trigger: CAAAGTATGAGTTCTGGATCATAAATTCCCAAGGAG...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CCA 90 bp | AGCAGCTGCCAGCAGATCACAGGCCATGGAGTGAATGTGGAGGTGTaGCGCCTTCCCAGTGTAGATGAAGCCCATCATCTCCTTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSCQQITGHGVNVEV*RLPSVDEAHHLLED Trigger: GTCTTCAAGGAGATGATGGGCTTCATCTACACTGGGAAGGCGCCACACCTCCACATTCACTCCATGGCCTGTGATCTGCTGGCAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CCA 90 bp | AAACGCCGTGCAGAAGCCAGGAAGTGGAATGCTTCAGCTACCAAGTaGGGATTTGACTCCACCATTGACTTCCACTCTGAGGTCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: KRRAEARKWNASATK*GFDSTIDFHSEVSQ Trigger: CTGTGAGACCTCAGAGTGGAAGTCAATGGTGGAGTCAAATCCCCACTTGGTAGCTGAAGCATTCCACTTCCTGGCTTCTGCACGGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CCA 90 bp | TTAAAGAAGGTTCCCACTATGCTCACTTGGCAGCAGAGGGTAAGCTaGTCTTCAGGGAGGAGCCAAGGTGGATTGGAGAGGAGGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: LKKVPTMLTWQQRVS*SSGRSQGGLERRKS Trigger: AGATTTCCTCCTCTCCAATCCACCTTGGCTCCTCCCTGAAGACCAGCTTACCCTCTGCTGCCAAGTGAGCATAGTGGGAACCTTCTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | CTGGTTATAGCTGTTGGAAGACAGATGTTGGTCATAGCTGTCCATCCCCTAAACTCCCACTATGCTCACTaGGCAGCAGAGGGTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LVIAVGRQMLVIAVHPLNSHYAH*AAEGKL Trigger: CAGCTTACCCTCTGCTGCCAAGTGAGCATAGTGGGA...GTTTAGGGGATGGACAGCTATGACCAACATCTGTCTTCCAACAGCTATAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | TGCATTTCCTCAGCCCTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGTGAGCCCTGAATTCTaGGCCAGCTACAAACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: CISSALHWLNTCSFPVLRVSPEF*ASYKQA Trigger: TGCCTGTTTGTAGCTGGCCAAGAATTCAGGGCTCAC...TCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAGGGCTGAGGAAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | TCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGTCTAAATGCAGACTCCCACTATGCTCACTaGGCAGCAGAGGGTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SILCSGLQSSLLHSLNADSHYAH*AAEGKL Trigger: CAGCTTACCCTCTGCTGCCAAGTGAGCATAGTGGGA...GTCTGCATTTAGACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTTGTTGTAGCTACCTCAGTGCTGGGGTTAGGAGCATGAAATACCACACCCTACCAAGTGGGGATTaGACTCCACCATTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: SFCCSYLSAGVRSMKYHTLPSGD*TPPLTS Trigger: GGAAGTCAATGGTGGAGTCAAATCCCCACTTGGTAG...GGTGTGGTATTTCATGCTCCTAACCCCAGCACTGAGGTAGCTACAACAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | TCTATCCTTTGCTCTGGGCTCCAGTCATCTCTTCTACATAGTCTAAATGCAGACCTACCAAGTGGGGATTaGACTCCACCATTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: SILCSGLQSSLLHSLNADLPSGD*TPPLTS Trigger: GGAAGTCAATGGTGGAGTCAAATCCCCACTTGGTAG...GTCTGCATTTAGACTATGTAGAAGAGATGACTGGAGCCCAGAGCAAAGGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 90 bp | TGGGTGTACCCTCAAACACCATTCCACTTTGTCACTGGCCTCCAGTaGGAATTTTGGGCTTGTAATCTTTTCCCTAGTTCCATCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: WVYPQTPFHFVTGLQ*EFWACNLFPSSIHE Trigger: TTCATGGATGGAACTAGGGAAAAGATTACAAGCCCAAAATTCTCACTGGAGGCCAGTGACAAAGTGGAATGGTGTTTGAGGGTACACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTGTGAGCCCTGAATTCTaGGCCAGCTACAAACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TDIITHNVNFFSVSPGWGVSPEF*ASYKQA Trigger: TGCCTGTTTGTAGCTGGCCAAGAATTCAGGGCTCAC...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | CTGCACTGGCTCAATACATGTTCATTTCCTGTCCTGAGAGGACTCTTCACTCTCCGTAGGATAAACTTTTaGAATCCCCTGTATTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LHWLNTCSFPVLRGLFTLRRINF*NPLYWF Trigger: AAACCAATACAGGGGATTCAAAAAGTTTATCCTACG...GAGAGTGAAGAGTCCTCTCAGGACAGGAAATGAACATGTATTGAGCCAGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTTGTTGTAGCTACCTCAGTGCTGGGGTTAGGAGCATGAAATACCACACCCGTAGGATAAACTTTTaGAATCCCCTGTATTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SFCCSYLSAGVRSMKYHTRRINF*NPLYWF Trigger: AAACCAATACAGGGGATTCAAAAAGTTTATCCTACG...GGTGTGGTATTTCATGCTCCTAACCCCAGCACTGAGGTAGCTACAACAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS-3UTR CAA 90 bp | ACAGACATAATAACGCATAATGTAAATTTCTTCTCTGTTAGCCCAGGATGGGGTATGTGTCTTGGATCCTaGATTGCAGGTGTTATGTTC | + |
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Preference number: 5 (lower is better) Translates to: TDIITHNVNFFSVSPGWGMCLGS*IAGVMF Trigger: GAACATAACACCTGCAATCAAGGATCCAAGACACAT...ACCCCATCCTGGGCTAACAGAGAAGAAATTTACATTATGCGTTATTATGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 72 bp | CTGGAGAGCGAGCTGCTAGGATGGCCTTGTGAGCCCTaGATTCTTGGCCAGCTACAAACAGGCAGCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LESELLGWPCEP*ILGQLQTGSSL Trigger: CAGACTGCTGCCTGTTTGTAGCTGGCCAAGAATTCAGGGCTCACAAGGCCATCCTAGCAGCTCGCTCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS GCA 72 bp | GACCATCAAGCCCTCCATGCCATACCTGTCAGCAGCTaGCAGCAGATCACAGGCCATGGAGTGAATGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DHQALHAIPVSS*QQITGHGVNVE Trigger: CTCCACATTCACTCCATGGCCTGTGATCTGCTGGCAGCTGCTGACAGGTATGGCATGGAGGGCTTGATGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 72 bp | CTGAAAACTGGAGAGCGAGCTGCTAGGATGGCCTTGTaGGCCCTGAATTCTTGGCCAGCTACAAACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LKTGERAARMAL*ALNSWPATNRQ Trigger: CTGCCTGTTTGTAGCTGGCCAAGAATTCAGGGCTCACAAGGCCATCCTAGCAGCTCGCTCTCCAGTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CCA 72 bp | GCAGAAGCCAGGAAGTGGAATGCTTCAGCTACCAAGTaGGGATTTGACTCCACCATTGACTTCCACTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AEARKWNASATK*GFDSTIDFHSE Trigger: CTCAGAGTGGAAGTCAATGGTGGAGTCAAATCCCCACTTGGTAGCTGAAGCATTCCACTTCCTGGCTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 72 bp | TTCAGGTGTGTTAAAGAAGGTTCCCACTATGCTCACTaGGCAGCAGAGGGTAAGCTGGTCTTCAGGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FRCVKEGSHYAH*AAEGKLVFREE Trigger: CTCCTCCCTGAAGACCAGCTTACCCTCTGCTGCCAAGTGAGCATAGTGGGAACCTTCTTTAACACACCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 72 bp | CCAGGAAGTGGAATGCTTCAGCTACCAAGTGGGGATTaGACTCCACCATTGACTTCCACTCTGAGGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PGSGMLQLPSGD*TPPLTSTLRSH Trigger: GTGAGACCTCAGAGTGGAAGTCAATGGTGGAGTCAAATCCCCACTTGGTAGCTGAAGCATTCCACTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 72 bp | CTTCCGTTTGGGTGTACCCTCAAACACCATTCCACTTaGTCACTGGCCTCCAGTGAGAATTTTGGGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LPFGCTLKHHST*SLASSENFGLV Trigger: TACAAGCCCAAAATTCTCACTGGAGGCCAGTGACAAAGTGGAATGGTGTTTGAGGGTACACCCAAACGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 90 bp | CCAGGTAAACTGACAGGTAATCTTTGCTTTCTTCATCACTTCCGTTaGGGTGTACCCTCAAACACCATTCCACTTTGTCACTGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGKLTGNLCFLHHFR*GVPSNTIPLCHWPP Trigger: TGGAGGCCAGTGACAAAGTGGAATGGTGTTTGAGGGTACACCCAAACGGAAGTGATGAAGAAAGCAAAGATTACCTGTCAGTTTACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 90 bp | TCTTCATCACTTCCGTTTGGGTGTACCCTCAAACACCATTCCACTTaGTCACTGGCCTCCAGTGAGAATTTTGGGCTTGTAATCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSLPFGCTLKHHST*SLASSENFGLVIFS Trigger: GGAAAAGATTACAAGCCCAAAATTCTCACTGGAGGCCAGTGACAAAGTGGAATGGTGTTTGAGGGTACACCCAAACGGAAGTGATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 72 bp | CCTCAAACACCATTCCACTTTGTCACTGGCCTCCAGTaGGAATTTTGGGCTTGTAATCTTTTCCCTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PQTPFHFVTGLQ*EFWACNLFPSS Trigger: GGAACTAGGGAAAAGATTACAAGCCCAAAATTCTCACTGGAGGCCAGTGACAAAGTGGAATGGTGTTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 72 bp | CCCATCATCTCCTTGAAGACTTTGGGATCCAGGTCATaGATATCAACACGGTTTGTTAGTCTCTCCACCATT | + |
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Preference number: 6 (lower is better) Translates to: PIISLKTLGSRS*ISTRFVSLSTI Trigger: AATGGTGGAGAGACTAACAAACCGTGTTGATATCAATGACCTGGATCCCAAAGTCTTCAAGGAGATGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 72 bp | TCTCCATACTTTGATATTTCTCTCCTTGGGAATTTATaGTCCAGAACTCATACTTTGCCCAAACTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPYFDISLLGNL*SRTHTLPKLGS Trigger: AGAGCCCAGTTTGGGCAAAGTATGAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTATGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS CAA 72 bp | GACATTTGTCCTCTCCATACTTTGATATTTCTCTCCTaGGGAATTTATGATCCAGAACTCATACTTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DICPLHTLIFLS*GIYDPELILCP Trigger: TGGGCAAAGTATGAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTATGGAGAGGACAAATGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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| CDS TCA 72 bp | GCTTGTAATCTTTTCCCTAGTTCCATCCATGAAAAATaGAAAGTTGCTAATGGTCCACTTGTAGCAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ACNLFPSSIHEK*KVANGPLVAEV Trigger: AACTTCTGCTACAAGTGGACCATTAGCAACTTTTCATTTTTCATGGATGGAACTAGGGAAAAGATTACAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161475.2 ENSMUST00000167916.2 |
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