Pregenerated sensors for SPOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057522Ensembl transcript IDs: ENSMUST00000107722.8, ENSMUST00000107724.9
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGGACCGGCTCCTATaGAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PFGRGANQKGQDRLL*RQLVRCKQPGHLGW Trigger: CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCGGTCCTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 90 bp | GCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTaGTCCCAGATACTCGCCAGGACATGGCTGGCAGCTCCTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: AEEAHYNCLPWQSRT*SQILARTWLAAPQG Trigger: TCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 90 bp | CATCGTGCAGTCTTTTCCCTGACACAGAGTAAAAGCTCCACAGATTaGGCTGTCTACCTGGTAGTCAGTGGCAGCAACGGTGGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: HRAVFSLTQSKSSTD*AVYLVVSGSNGGCC Trigger: GCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGACAGCGCAATCTGTGGAGCTTTTACTCTGTGTCAGGGAAAAGACTGCACGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 90 bp | CTCCACAGATTGCGCTGTCTACCTGGTAGTCAGTGGCAGCAACGGTaGCTGCTGCTTCTGGAAAATAAATGGAGTCTCCCAACTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LHRLRCLPGSQWQQR*LLLLENKWSLPTGS Trigger: GCTGCCAGTTGGGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGACAGCGCAATCTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 90 bp | GGTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTaGCTTGGCAAAGTAGGACCTGGTCCCAGATACTCGCCAGGACAT | + |
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Preference number: 1 (lower is better) Translates to: GINTHRVQKKPTTIA*LGKVGPGPRYSPGH Trigger: ATGTCCTGGCGAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 90 bp | GCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCGTGAGACTATaGAGAGTAAATAAATCCTACCGCTTCTTAGACATTCTGAACATA | + |
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Preference number: 1 (lower is better) Translates to: AAPQGGQQAGSCVRL*RVNKSYRFLDILNI Trigger: TATGTTCAGAATGTCTAAGAAGCGGTAGGATTTATTTACTCTCCATAGTCTCACGCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCAGGCAACTAGTCAGGTaGAAACAGCCAGGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: LARTWLAAPQGGQQAGSCRQLVR*KQPGHL Trigger: CAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCT...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR TCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCTTTTGCTCCAGGCACTaGCGATTTGTTCTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LARTWLAAPQGGQQAGSCFCSRH*RFVLLS Trigger: ACTGAGCAGAACAAATCGTCAGTGCCTGGAGCAAAA...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCCTATGCAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGGTCCCAGTGTCAAACTTaGTCAGGCCAAAGGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: RLLCRQLVRCKQPGHLGWSQCQT*SGQRAH Trigger: GTGTGCCCTTTGGCCTGACCAAGTTTGACACTGGGA...CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCTCCGAAGTACCACTGCTGGGATGTGCTTGGGGCCAGTGCCTAAACTGCCAAAGGGCACACGGTaGCAGAGCAACAGGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PFLRSTTAGMCLGPVPKLPKGTR*QSNRVS Trigger: TGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGG...CAGTTTAGGCACTGGCCCCAAGCACATCCCAGCAGTGGTACTTCGGAGAAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCCTATGCAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGGTTTTGCTCCAGGCACTaGCGATTTGTTCTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: RLLCRQLVRCKQPGHLGWFCSRH*RFVLLS Trigger: ACTGAGCAGAACAAATCGTCAGTGCCTGGAGCAAAA...CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCCTATGCAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGGGGTGGCTGCTGCTTCTaGAAAATAAATGGAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RLLCRQLVRCKQPGHLGWGGCCF*KINGVS Trigger: GGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACC...CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCAGCTCTTCTGATACTTaGATGGTAGTGAGGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LARTWLAAPQGGQQAGSCSSSDT*MVVRSF Trigger: AAAACTCCTCACTACCATCCAAGTATCAGAAGAGCT...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACTCGCCAGGACATGGCTaGCAGCTCCTCAAGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: KKPTTIACLGKVGPGPRYSPGHG*QLLKED Trigger: GTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGA...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGGGCAGCAACGGTGGCTaGTGCTTCTGGAAAATAAAT | + |
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Preference number: 2 (lower is better) Translates to: QRAHGDRATGFHQVEWPEGSNGG*CFWKIN Trigger: ATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCC...CTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGGGTGGCTGCTGCTTCTaGAAAATAAATGGAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QRAHGDRATGFHQVEWPEGGCCF*KINGVS Trigger: GGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACC...CTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTCCCAGTGTCAAACTTaGTCAGGCCAAAGGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: VQKKPTTIACLGKVGPGPSQCQT*SGQRAH Trigger: GTGTGCCCTTTGGCCTGACCAAGTTTGACACTGGGA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACACCACTGCTGGGATGTaGTTGGGGCCAGTGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: KKPTTIACLGKVGPGPRYTTAGM*LGPVPK Trigger: TTTAGGCACTGGCCCCAAGCACATCCCAGCAGTGGT...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCGGCAGCAACGGTGGCTaGTGCTTCTGGAAAATAAAT | + |
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Preference number: 2 (lower is better) Translates to: VQKKPTTIACLGKVGPGPGSNGG*CFWKIN Trigger: ATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCC...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | CCATTTCTCCGAAGTACCACTGCTGGGATGTGCTTGGGGCCAGTGCCTAAACTGCTTCTGGAAAATAAATaGAGTCTCCCAACTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PFLRSTTAGMCLGPVPKLLLENK*SLPTGS Trigger: GCTGCCAGTTGGGAGACTCCATTTATTTTCCAGAAG...CAGTTTAGGCACTGGCCCCAAGCACATCCCAGCAGTGGTACTTCGGAGAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAGGCAACTAGTCAGGTaGAAACAGCCAGGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: VLTHTGCRRSPLQLLALARQLVR*KQPGHL Trigger: CAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCT...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGCAGTGGCAGCAACGGTaGCTGCTGCTTCTGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KLTFGSLPFGRGANQKGQQWQQR*LLLLEN Trigger: ATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTG...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | GAGATCAAACCAGGGCTTCAAGATCTCACAGGCAAGCATCTCAGACCCAAGAGAAGCAACGGTGGCTGCTaGTTCTGGAAAATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: EIKPGLQDLTGKHLRPKRSNGGC*FWKING Trigger: TCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCT...TCTCTTGGGTCTGAGATGCTTGCCTGTGAGATCTTGAAGCCCTGGTTTGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGCCGAAGTACCACTGCTaGGATGTGCTTGGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQPKYHC*DVLGAS Trigger: ACTGGCCCCAAGCACATCCCAGCAGTGGTACTTCGG...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGCTCTTCTGATACTTaGATGGTAGTGAGGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: VQKKPTTIACLGKVGPGPSSSDT*MVVRSF Trigger: AAAACTCCTCACTACCATCCAAGTATCAGAAGAGCT...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGACCACTGCTGGGATGTaGTTGGGGCCAGTGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQTTAGM*LGPVPK Trigger: TTTAGGCACTGGCCCCAAGCACATCCCAGCAGTGGT...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | GAGATCAAACCAGGGCTTCAAGATCTCACAGGCAAGCATCTCAGACCCAAGAGAACTGACGATTTGTTCTaGTCAGTCAGACACCCATTT | + |
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Preference number: 2 (lower is better) Translates to: EIKPGLQDLTGKHLRPKRTDDLF*SVRHPF Trigger: AAATGGGTGTCTGACTGAGCAGAACAAATCGTCAGT...TCTCTTGGGTCTGAGATGCTTGCCTGTGAGATCTTGAAGCCCTGGTTTGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAATTCCTTTTCCACCTCTaGAGACTAAATGTCCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: INTHRVQKKPTTIACLGKFLFHL*RLNVRL Trigger: CAAGCGGACATTTAGTCTTCAGAGGTGGAAAAGGAA...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAAGCAACGGTGGCTGCTaGTTCTGGAAAATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: INTHRVQKKPTTIACLGKSNGGC*FWKING Trigger: TCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCT...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCCTTCTGGAAAATAAATaGAGTCTCCCAACTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSLLENK*SLPTGS Trigger: GCTGCCAGTTGGGAGACTCCATTTATTTTCCAGAAG...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAGCTGCGTGAGACTATaGAGAGTAAATAAATCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VLTHTGCRRSPLQLLALASCVRL*RVNKSY Trigger: GTAGGATTTATTTACTCTCCATAGTCTCACGCAGCT...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGAAAAGCTCCACAGATTaGGCTGTCTACCTGGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQKSSTD*AVYLVV Trigger: GACTACCAGGTAGACAGCGCAATCTGTGGAGCTTTT...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCACCAATAAGAATTTTTaGAGAAGCCACTACCGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSTNKNF*RSHYRQ Trigger: TTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGT...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR TCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGTTCCTTTTCCACCTCTaGAGACTAAATGTCCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQFLFHL*RLNVRL Trigger: CAAGCGGACATTTAGTCTTCAGAGGTGGAAAAGGAA...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGAAGAGGATAAAAGGATaGGCTTGTTCTTGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQKRIKG*ACSCKQ Trigger: CTGTTTGCAAGAACAAGCCCATCCTTTTATCCTCTT...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 72 bp | GCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGTCCTaGGCCCTTCCCTCCCCCAGTCCCCCTAAGTTATTT | + |
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Preference number: 3 (lower is better) Translates to: ATGFHQVEWPES*ALPSPSPPKLF Trigger: AAATAACTTAGGGGGACTGGGGGAGGGAAGGGCCCAGGACTCGGGCCACTCAACCTGATGAAACCCTGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 72 bp | GCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTaGTCCCAGATACTCGCCAGGACATGGCTGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: AHYNCLPWQSRT*SQILARTWLAA Trigger: AGCTGCCAGCCATGTCCTGGCGAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 72 bp | CAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTaGCAAAGTAGGACCTGGTCCCAGATACTCGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QGAEEAHYNCLP*QSRTWSQILAR Trigger: CCTGGCGAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 72 bp | CTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTaGGTGAGACTATGGAGAGTAAATAAATCCTACCGC | + |
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Preference number: 3 (lower is better) Translates to: LAAPQGGQQAGS*VRLWRVNKSYR Trigger: GCGGTAGGATTTATTTACTCTCCATAGTCTCACGCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 72 bp | GTCTACCTGGTAGTCAGTGGCAGCAACGGTGGCTGCTaGTTCTGGAAAATAAATGGAGTCTCCCAACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: VYLVVSGSNGGC*FWKINGVSQLA Trigger: TGCCAGTTGGGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 72 bp | GCTGTCTACCTGGTAGTCAGTGGCAGCAACGGTGGCTaGTGCTTCTGGAAAATAAATGGAGTCTCCCAACTG | + |
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Preference number: 3 (lower is better) Translates to: AVYLVVSGSNGG*CFWKINGVSQL Trigger: CAGTTGGGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR GCA 72 bp | ACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTaGCTTGGCAAAGTAGGACCTGGTCCCAGATACTCG | + |
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Preference number: 3 (lower is better) Translates to: THRVQKKPTTIA*LGKVGPGPRYS Trigger: CGAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR CCA 72 bp | TTGCGCTGTCTACCTGGTAGTCAGTGGCAGCAACGGTaGCTGCTGCTTCTGGAAAATAAATGGAGTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LRCLPGSQWQQR*LLLLENKWSLP Trigger: TGGGAGACTCCATTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGACAGCGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTTGGAAGTCTCCCCTTaGGAAGAGGGGCTAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: VQKKPTTIACLGKVGPGPLEVSP*EEGLIR Trigger: TCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACCCAGGCACTGACGATTaGTTCTGCTCAGTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: KKPTTIACLGKVGPGPRYPGTDD*FCSVRH Trigger: GTGTCTGACTGAGCAGAACAAATCGTCAGTGCCTGG...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR GCA 72 bp | GTCTTTTCCCTGACACAGAGTAAAAGCTCCACAGATTaGGCTGTCTACCTGGTAGTCAGTGGCAGCAACGGT | + |
|
Preference number: 3 (lower is better) Translates to: VFSLTQSKSSTD*AVYLVVSGSNG Trigger: ACCGTTGCTGCCACTGACTACCAGGTAGACAGCGCAATCTGTGGAGCTTTTACTCTGTGTCAGGGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR CCA 72 bp | AAGCTCCACAGATTGCGCTGTCTACCTGGTAGTCAGTaGCAGCAACGGTGGCTGCTGCTTCTGGAAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLHRLRCLPGSQ*QQRWLLLLENK Trigger: TTTATTTTCCAGAAGCAGCAGCCACCGTTGCTGCCACTGACTACCAGGTAGACAGCGCAATCTGTGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAATCCCAGTGTCAAACTaGGTCAGGCCAAAGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLTHTGCRRSPLQLLALAIPVSN*VRPKGT Trigger: TGTGCCCTTTGGCCTGACCAAGTTTGACACTGGGAT...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR TCA 72 bp | AGCCACTACCGCCAAACACTCATTTTCCAGATCAGATaGCTTCCCCCGCCATCACGCATCACTTGTCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHYRQTLIFQIR*LPPPSRITCHK Trigger: CTTATGACAAGTGATGCGTGATGGCGGGGGAAGTCATCTGATCTGGAAAATGAGTGTTTGGCGGTAGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCCCAGGCACTGACGATTaGTTCTGCTCAGTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSPGTDD*FCSVRH Trigger: GTGTCTGACTGAGCAGAACAAATCGTCAGTGCCTGG...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAATTGGAAGTCTCCCCTTaGGAAGAGGGGCTAATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: INTHRVQKKPTTIACLGKLEVSP*EEGLIR Trigger: TCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAA...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR GCA 72 bp | AAGGAGATTTGGGATTGGGTATTAACACACACAGGGTaGAGAAGAAGCCCACTACAATTGCTTGCCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KEIWDWVLTHTG*RRSPLQLLALA Trigger: TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCAGGATGGGCTTGTTCTaGCAAACAGTAAGTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSRMGLF*QTVSAN Trigger: GTTAGCACTTACTGTTTGCAAGAACAAGCCCATCCT...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACGATAAAAGGATGGGCTaGTTCTTGCAAACAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KKPTTIACLGKVGPGPRYDKRMG*FLQTVS Trigger: ACTTACTGTTTGCAAGAACAAGCCCATCCTTTTATC...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAACACAAATATCCACAGTaGGAAGGACTAAAATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: INTHRVQKKPTTIACLGKHKYPQ*EGLKFA Trigger: AGCAAATTTTAGTCCTTCCAACTGTGGATATTTGTG...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR-3UTR CAA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGGATAAAAGGATGGGCTaGTTCTTGCAAACAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQDKRMG*FLQTVS Trigger: ACTTACTGTTTGCAAGAACAAGCCCATCCTTTTATC...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR CCA 72 bp | TATTTTGATTTTGTTAGGAGAAAGGAGATTTGGGATTaGGTATTAACACACACAGGGTGCAGAAGAAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YFDFVRRKEIWD*VLTHTGCRRSP Trigger: TGGGCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCTAACAAAATCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR CCA 72 bp | TATATATATTTTGATTTTGTTAGGAGAAAGGAGATTTaGGATTGGGTATTAACACACACAGGGTGCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YIYFDFVRRKEI*DWVLTHTGCRR Trigger: TCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCTAACAAAATCAAAATATATATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR CAA 72 bp | GGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTaGAGTGGCCCGAGTCCTGGGCCCTTCCCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHTVTEQQGFIR*SGPSPGPFPPP Trigger: TGGGGGAGGGAAGGGCCCAGGACTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCATTGCTTCAGGCGTTTaGGTGGGGGCCCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LARTWLAAPQGGQQAGSCIASGV*VGAPGK Trigger: CTTTCCTGGGGCCCCCACGCAAACGCCTGAAGCAAT...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCACCACTCGACATTTCTaGCGGAGGTGGAGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LARTWLAAPQGGQQAGSCTTRHF*RRWRTW Trigger: CCAAGTCCTCCACCTCCGGCAGAAATGTCGAGTGGT...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCCCGAACTTCACTCTTTaGACAGCTGACCAACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LARTWLAAPQGGQQAGSCPNFTL*TADQQQ Trigger: CTGTTGTTGGTCAGCTGTCCAAAGAGTGAAGTTCGG...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTCTTCAGGCGTTTGCGTaGGGGCCCCAGGAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSGQRAHGDRATGFHQVLQAFA*GPQERA Trigger: TGCCCTTTCCTGGGGCCCCCACGCAAACGCCTGAAG...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTCTCCGAAGTACCACTGCTGGGATGTGCTTGGGGCCAGTGCCTAAACTGCGTCTTCAGCTGATCTaGGCTGTGGAGGTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLRSTTAGMCLGPVPKLRLQLI*AVEVSQ Trigger: CTGGCTGACCTCCACAGCGCAGATCAGCTGAAGACG...CAGTTTAGGCACTGGCCCCAAGCACATCCCAGCAGTGGTACTTCGGAGAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | CGGCTCCTATGCAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGGAGAACTTCACTACCTTaGTCTGTGTATAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCRQLVRCKQPGHLGWRTSLP*SVYSTS Trigger: GCTGGTGCTATACACAGATCAAGGTAGTGAAGTTCT...CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | CGGCTCCTATGCAGGCAACTAGTCAGGTGCAAACAGCCAGGCCATCTGGGCTGGTCTGCCCAGAAATATTaGCAGAGTCTTGTACTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCRQLVRCKQPGHLGWSAQKY*QSLVLH Trigger: GTGTAGTACAAGACTCTGTCAATATTTCTGGGCAGA...CCAGCCCAGATGGCCTGGCTGTTTGCACCTGACTAGTTGCCTGCATAGGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCGGGCGTCCTCACACATaGCCTTCAGACGCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSGRPHT*PSDAPG Trigger: CCCTGGAGCGTCTGAAGGTCATGTGTGAGGACGCCC...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGGGCGTCCTCACACATaGCCTTCAGACGCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: INTHRVQKKPTTIACLGKGRPHT*PSDAPG Trigger: CCCTGGAGCGTCTGAAGGTCATGTGTGAGGACGCCC...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGTACTTATCGGCAGCTaGCAGCAAGTCGTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TWSGQRAHGDRATGFHQVVLIGS*QQVVSH Trigger: ATGGCTGACGACTTGCTGGCAGCTGCCGATAAGTAC...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGCTTCAGGCGTTTGCGTaGGGGCCCCAGGAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTFGSLPFGRGANQKGQLQAFA*GPQERA Trigger: TGCCCTTTCCTGGGGCCCCCACGCAAACGCCTGAAG...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| 3UTR CAA 72 bp | CACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTaGCCTTGGCAAAGTAGGACCTGGTCCCAGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: HTQGAEEAHYNC*PWQSRTWSQIL Trigger: GAGTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTCAGGATGAGAATCTCTaGAGCGTTCTCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWSGQRAHGDRATGFHQVQDENL*SVLHRE Trigger: CTCTCTGTGGAGAACGCTGCAGAGATTCTCATCCTG...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCACGTCTTCAGCTGATCTaGGCTGTGGAGGTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTHTGCRRSPLQLLALARLQLI*AVEVSQ Trigger: CTGGCTGACCTCCACAGCGCAGATCAGCTGAAGACG...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAATTGCTTCAGGCGTTTaGGTGGGGGCCCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTHTGCRRSPLQLLALAIASGV*VGAPGK Trigger: CTTTCCTGGGGCCCCCACGCAAACGCCTGAAGCAAT...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGTGGTTTCTTCTCCCTTaGCATTCAGGATGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRAHGDRATGFHQVEWPEWFLLP*HSGWRT Trigger: AGTTCTCCATCCTGAATGCCAAGGGAGAAGAAACCA...CTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGCTTCTGCCACTAAGTaGGGATGTGACACCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: TWSGQRAHGDRATGFHQVASATK*GCDTTI Trigger: AATGGTGGTGTCACATCCCCACTTAGTGGCAGAAGC...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTCAGGATGGAGAACTTaGACTTTGCCCGAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQKKPTTIACLGKVGPGPSGWRT*TLPELH Trigger: GTGAAGTTCGGGCAAAGTTCAAGTTCTCCATCCTGA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACACAAGCAGCAGTCGGTaGATCGAGAGTTCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KKPTTIACLGKVGPGPRYTSSSR*IESSPT Trigger: TGTGGGAGAACTCTCGATTCACCGACTGCTGCTTGT...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGGCGACAGGTAATCTTTaGTTTCTTCATCTAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRAHGDRATGFHQVEWPEATGNL*FLHLAL Trigger: AAGGGCTAGATGAAGAAAGCAAAGATTACCTGTCGC...CTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGGAAAGGGCACTGTGCTaGAGCCAGAGAACGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: KLTFGSLPFGRGANQKGQERALC*SQRTVC Trigger: GCATACCGTTCTCTGGCTTCAGCACAGTGCCCTTTC...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCGAAAGGGCACTGTGCTaGAGCCAGAGAACGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSERALC*SQRTVC Trigger: GCATACCGTTCTCTGGCTTCAGCACAGTGCCCTTTC...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAACCACTCGACATTTCTaGCGGAGGTGGAGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: INTHRVQKKPTTIACLGKTTRHF*RRWRTW Trigger: CCAAGTCCTCCACCTCCGGCAGAAATGTCGAGTGGT...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGTTGATGAAATCAACTaGCTGCGTCTTCAGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TWSGQRAHGDRATGFHQVVDEIN*LRLQLI Trigger: GATCAGCTGAAGACGCAGGCAGTTGATTTCATCAAC...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTGGTTTCTTCTCCCTTaGCATTCAGGATGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VQKKPTTIACLGKVGPGPWFLLP*HSGWRT Trigger: AGTTCTCCATCCTGAATGCCAAGGGAGAAGAAACCA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGACAAGCAGCAGTCGGTaGATCGAGAGTTCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLTFGSLPFGRGANQKGQTSSSR*IESSPT Trigger: TGTGGGAGAACTCTCGATTCACCGACTGCTGCTTGT...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCGCGACAGGTAATCTTTaGTTTCTTCATCTAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQKKPTTIACLGKVGPGPATGNL*FLHLAL Trigger: AAGGGCTAGATGAAGAAAGCAAAGATTACCTGTCGC...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCCACTCTTTGGACAGCTaGCCAACAACAGGTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSHSLDS*PTTGKA Trigger: CGCTTTACCTGTTGTTGGTCAGCTGTCCAAAGAGTG...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGCACTCTTTGGACAGCTaGCCAACAACAGGTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLTFGSLPFGRGANQKGQHSLDS*PTTGKA Trigger: CGCTTTACCTGTTGTTGGTCAGCTGTCCAAAGAGTG...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCCAGGATGAGAATCTCTaGAGCGTTCTCCACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSQDENL*SVLHRE Trigger: CTCTCTGTGGAGAACGCTGCAGAGATTCTCATCCTG...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CCA 90 bp | AAGTTAACATTTGGAAGTCTCCCCTTTGGAAGAGGGGCTAATCAGAAGGGACAGCAGGGAGAAGCCCATTaGCCTCGTCCAAGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: KLTFGSLPFGRGANQKGQQGEAH*PRPREN Trigger: ATTTTCTCTTGGACGAGGCCAATGGGCTTCTCCCTG...CTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCCAAATGTTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR TCA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACTCTGCCCAGAAATATTaGCAGAGTCTTGTACTACAC | + |
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Preference number: 4 (lower is better) Translates to: KKPTTIACLGKVGPGPRYSAQKY*QSLVLH Trigger: GTGTAGTACAAGACTCTGTCAATATTTCTGGGCAGA...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAGGAGAACTTGAACTTTaGCCGAACTTCACTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VLTHTGCRRSPLQLLALAGELEL*PNFTLW Trigger: CCAAAGAGTGAAGTTCGGGCAAAGTTCAAGTTCTCC...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCACAACCCGATTCTTTTTaGTCTCCTCCATTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: VLTHTGCRRSPLQLLALAQPDSF*SPPFHV Trigger: AACATGAAATGGAGGAGAGCAAAAAGAATCGGGTTG...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGCAGGGAGAAGCCCATTaGCCTCGTCCAAGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQQGEAH*PRPREN Trigger: ATTTTCTCTTGGACGAGGCCAATGGGCTTCTCCCTG...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGGCTTCTGCCACTAAGTaGGGATGTGACACCACCATT | + |
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Preference number: 4 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQASATK*GCDTTI Trigger: AATGGTGGTGTCACATCCCCACTTAGTGGCAGAAGC...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | GAGATCAAACCAGGGCTTCAAGATCTCACAGGCAAGCATCTCAGACCCAAGAGAATGTTCATAGTATTCTaGCCAGAAATATTGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: EIKPGLQDLTGKHLRPKRMFIVF*PEILTE Trigger: CTCTGTCAATATTTCTGGGCAGAATACTATGAACAT...TCTCTTGGGTCTGAGATGCTTGCCTGTGAGATCTTGAAGCCCTGGTTTGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | ATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAACAACCCGATTCTTTTTaGTCTCCTCCATTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: INTHRVQKKPTTIACLGKQPDSF*SPPFHV Trigger: AACATGAAATGGAGGAGAGCAAAAAGAATCGGGTTG...TTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR TCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGAGAACTTCACTACCTTaGTCTGTGTATAGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQRTSLP*SVYSTS Trigger: GCTGGTGCTATACACAGATCAAGGTAGTGAAGTTCT...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAATGTTCATAGTATTCTaGCCAGAAATATTGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLTHTGCRRSPLQLLALAMFIVF*PEILTE Trigger: CTCTGTCAATATTTCTGGGCAGAATACTATGAACAT...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR GCA 90 bp | AACACCAATAAGAATTTTTGCAGAAGCCACTACCGCCAAACACTCATTTTCCAGGTTGATGAAATCAACTaGCTGCGTCTTCAGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: NTNKNFCRSHYRQTLIFQVDEIN*LRLQLI Trigger: GATCAGCTGAAGACGCAGGCAGTTGATTTCATCAAC...CTGGAAAATGAGTGTTTGGCGGTAGTGGCTTCTGCAAAAATTCTTATTGGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | CTCGCCAGGACATGGCTGGCAGCTCCTCAAGGAGGACAACAGGCTGGCAGCTGCTTGGTTTCTTCTCCCTaGGCATTCAGGATGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LARTWLAAPQGGQQAGSCLVSSP*AFRMEN Trigger: GTTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAA...GCAGCTGCCAGCCTGTTGTCCTCCTTGAGGAGCTGCCAGCCATGTCCTGGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTCAGGGAGAAGCCCATaGGCCTCGTCCAAGAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VQKKPTTIACLGKVGPGPSGRSP*ASSKRK Trigger: TTTTCTCTTGGACGAGGCCAATGGGCTTCTCCCTGA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | CAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTGAGTGGCCCGAGTCAACCCGATTCTTTTaGCTCTCCTCCATTTCATGT | + |
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Preference number: 5 (lower is better) Translates to: QRAHGDRATGFHQVEWPESTRFF*LSSISC Trigger: ACATGAAATGGAGGAGAGCAAAAAGAATCGGGTTGA...CTCGGGCCACTCAACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GAGATCAAACCAGGGCTTCAAGATCTCACAGGCAAGCATCTCAGACCCAAGAGAGATGTGACACCACCATaGACTTCCACCCAGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: EIKPGLQDLTGKHLRPKRDVTPP*TSTQRS Trigger: AGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATC...TCTCTTGGGTCTGAGATGCTTGCCTGTGAGATCTTGAAGCCCTGGTTTGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCTTCAGGATGGAGAACTaGAACTTTGCCCGAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: VQKKPTTIACLGKVGPGPFRMEN*NFARTS Trigger: TGAAGTTCGGGCAAAGTTCAAGTTCTCCATCCTGAA...GGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | ACTTGGTCAGGCCAAAGGGCACACGGTGACAGAGCAACAGGGTTTCATCAGGTTCTGCGGATGAATTTTTaGAATCCCCAGTCTTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TWSGQRAHGDRATGFHQVLRMNF*NPQSLP Trigger: AGGCAAAGACTGGGGATTCAAAAAATTCATCCGCAG...AACCTGATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCATCAGGGAGAAGCCCATaGGCCTCGTCCAAGAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLTHTGCRRSPLQLLALASGRSP*ASSKRK Trigger: TTTTCTCTTGGACGAGGCCAATGGGCTTCTCCCTGA...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCGATGTGACACCACCATaGACTTCCACCCAGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSDVTPP*TSTQRS Trigger: AGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATC...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | AAGAAGCCCACTACAATTGCTTGCCTTGGCAAAGTAGGACCTGGTCCCAGATACTTCAGGATGGAGAACTaGAACTTTGCCCGAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: KKPTTIACLGKVGPGPRYFRMEN*NFARTS Trigger: TGAAGTTCGGGCAAAGTTCAAGTTCTCCATCCTGAA...GTATCTGGGACCAGGTCCTACTTTGCCAAGGCAAGCAATTGTAGTGGGCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | AGGAGAAAGGAGATTTGGGATTGGGTATTAACACACACAGGGTGCAGAAGAAGCTTGGTTTCTTCTCCCTaGGCATTCAGGATGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: RRKEIWDWVLTHTGCRRSLVSSP*AFRMEN Trigger: GTTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAA...GCTTCTTCTGCACCCTGTGTGTGTTAATACCCAATCCCAAATCTCCTTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GAGATCAAACCAGGGCTTCAAGATCTCACAGGCAAGCATCTCAGACCCAAGAGATTCTGCCCAGAAATATaGACAGAGTCTTGTACTACA | + |
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Preference number: 5 (lower is better) Translates to: EIKPGLQDLTGKHLRPKRFCPEI*TESCTT Trigger: TGTAGTACAAGACTCTGTCAATATTTCTGGGCAGAA...TCTCTTGGGTCTGAGATGCTTGCCTGTGAGATCTTGAAGCCCTGGTTTGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS-3UTR CAA 90 bp | GTATTAACACACACAGGGTGCAGAAGAAGCCCACTACAATTGCTTGCCTTGGCATCAACCCGATTCTTTTaGCTCTCCTCCATTTCATGT | + |
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Preference number: 5 (lower is better) Translates to: VLTHTGCRRSPLQLLALASTRFF*LSSISC Trigger: ACATGAAATGGAGGAGAGCAAAAAGAATCGGGTTGA...TGCCAAGGCAAGCAATTGTAGTGGGCTTCTTCTGCACCCTGTGTGTGTTAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS GCA 72 bp | GACCTTCAGACGCTCCAGGGCGTACTTATCGGCAGCTaGCAGCAAGTCGTCAGCCATCTTGTCGAGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: DLQTLQGVLIGS*QQVVSHLVEVR Trigger: CCGAACCTCGACAAGATGGCTGACGACTTGCTGGCAGCTGCCGATAAGTACGCCCTGGAGCGTCTGAAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS TCA 72 bp | TCTTCAGCTGATCTGCGCTGTGGAGGTCAGCCAGGATaGGAATCTCTGCAGCGTTCTCCACAGAGAGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: SSADLRCGGQPG*ESLQRSPQRGY Trigger: GTAACCTCTCTGTGGAGAACGCTGCAGAGATTCTCATCCTGGCTGACCTCCACAGCGCAGATCAGCTGAAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS CAA 72 bp | TCTTGTACTACACTCACCTCACAGAAGAGGGTGAGCTaGTCATCAGGGAGAAGCCCATTGGCCTCGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SCTTLTSQKRVS*SSGRSPLASSK Trigger: CTTGGACGAGGCCAATGGGCTTCTCCCTGATGACAAGCTCACCCTCTTCTGTGAGGTGAGTGTAGTACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS GCA 72 bp | CAAGACATCCGAAGCATGATAGTTGATGAAATCAACTaGCTGCGTCTTCAGCTGATCTGCGCTGTGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QDIRSMIVDEIN*LRLQLICAVEV Trigger: GACCTCCACAGCGCAGATCAGCTGAAGACGCAGGCAGTTGATTTCATCAACTATCATGCTTCGGATGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS CAA 90 bp | TTGACAGAGTCTTGTACTACACTCACCTCACAGAAGAGGGTGAGCTaGTCATCAGGGAGAAGCCCATTGGCCTCGTCCAAGAGAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LTESCTTLTSQKRVS*SSGRSPLASSKRKS Trigger: AGATTTTCTCTTGGACGAGGCCAATGGGCTTCTCCCTGATGACAAGCTCACCCTCTTCTGTGAGGTGAGTGTAGTACAAGACTCTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS CAA 90 bp | CATTCAGGAACCTTTACCATGTTCATAGTATTCTGCCCAGAAATATaGACAGAGTCTTGTACTACACTCACCTCACAGAAGAGGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HSGTFTMFIVFCPEI*TESCTTLTSQKRVS Trigger: GCTCACCCTCTTCTGTGAGGTGAGTGTAGTACAAGACTCTGTCAATATTTCTGGGCAGAATACTATGAACATGGTAAAGGTTCCTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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| CDS CAA 72 bp | GTTCATAGTATTCTGCCCAGAAATATTGACAGAGTCTaGTACTACACTCACCTCACAGAAGAGGGTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VHSILPRNIDRV*YYTHLTEEGEL Trigger: AAGCTCACCCTCTTCTGTGAGGTGAGTGTAGTACAAGACTCTGTCAATATTTCTGGGCAGAATACTATGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107722.8 ENSMUST00000107724.9 |
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