Pregenerated sensors for SPON2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037379Ensembl transcript IDs: ENSMUST00000046186.8, ENSMUST00000201475.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTGTGGTCACCCCCATGTGGGCACAGGAGTGGTGTGAAGGTTaGCTCCCTGGCACATGTGGTGGCAGCAGGTCTGAGGTATCTGAC | + |
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Preference number: 1 (lower is better) Translates to: PPVVTPMWAQEWCEG*LPGTCGGSRSEVSD Trigger: GTCAGATACCTCAGACCTGCTGCCACCACATGTGCCAGGGAGTCAACCTTCACACCACTCCTGTGCCCACATGGGGGTGACCACAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 90 bp | CCTCTGGGTGAAGACCTCTGTCAGCCCAGGATTGGTGGGAAACGGTaGAAAACTGCCCACGCTCTCCATCCCTGCCTGCATGGGACTCCT | + |
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Preference number: 1 (lower is better) Translates to: PLGEDLCQPRIGGKR*KTAHALHPCLHGTP Trigger: AGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCTGACAGAGGTCTTCACCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 90 bp | AGGATTGGTGGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTaGCTGCATGGGACTCCTGTGGAAACACCTTGTGGCCCAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: RIGGKRCKTAHALHP*LHGTPVETPCGPDL Trigger: CAGATCTGGGCCACAAGGTGTTTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 90 bp | GGGAATTTATGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTaGGAGAGGCAGTCTGTGGCTTACCTGCCACTGCGGTCCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GNLCRSNPRASGVTQ*ERQSVAYLPLRSSG Trigger: CCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACATAAATTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 90 bp | GTAGTTGTGGGGTTCACAGGCTTAGAGCATCCTCTCAGCTGTTCCTaGCATGCCTGCTCTCTGTATCAAAGGCAGCCTCCCTCCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: VVVGFTGLEHPLSCS*HACSLYQRQPPSHH Trigger: GTGGTGGGAGGGAGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTCTAAGCCTGTGAACCCCACAACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 90 bp | GGGTTCACAGGCTTAGAGCATCCTCTCAGCTGTTCCTGGCATGCCTaGTCTCTGTATCAAAGGCAGCCTCCCTCCCACCACAGTAATAAA | + |
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Preference number: 1 (lower is better) Translates to: GFTGLEHPLSCSWHA*SLYQRQPPSHHSNK Trigger: TTTATTACTGTGGTGGGAGGGAGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTCTAAGCCTGTGAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CAA 90 bp | CCTGCCACTGCGGTCCTCTGGGTGAAGACCTCTGTCAGCCCAGGATaGGTGGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PATAVLWVKTSVSPG*VGNGAKLPTLSIPA Trigger: GGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCGAAACGGTGCAAAACTaGCCACGCTCTCCATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFETVQN*PRSPSL Trigger: CAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTC...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTATGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTGGGAGAGGCAGTGCCACTGCGGTCCTCTaGGTGAAGACCTCTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: IYVDQTHEPQESHSGRGSATAVL*VKTSVS Trigger: GCTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGC...ACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACATAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCACAGGCTTATGTGGAAACACCTTGTaGCCCAGATCTGAGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GSRSEVSDSSVVVGFTGLCGNTL*PRSESQ Trigger: CTGGGACTCAGATCTGGGCCACAAGGTGTTTCCACA...TAAGCCTGTGAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCTCAGCCCAGGATTGGTaGGAAACGGTGCAAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFSAQDW*ETVQNC Trigger: GCAGTTTTGCACCGTTTCCCACCAATCCTGGGCTGA...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR GCA 90 bp | TTCACAGGCTTAGAGCATCCTCTCAGCTGTTCCTGGCATGCCTGCTCTCTGTATATTGGTGGGAAACGGTaGAAAACTGCCCACGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FTGLEHPLSCSWHACSLYIGGKR*KTAHAL Trigger: GAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAAT...ATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTCTAAGCCTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR GCA 90 bp | ACACGACCTTTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCCTCTCCATCCCTGCCTaGATGGGACTCCTGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TRPLFECKGINDTQGPSFLSIPA*MGLLWK Trigger: TTTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAG...GAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAAAACTGCAGCTGTTCCTGGCATaGCTGCTCTCTGTATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LFECKGINDTQGPSFEKLQLFLA*LLSVSK Trigger: CTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTG...CAGTTTTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 72 bp | CACAGTGGGAGAGGCAGTCTGTGGCTTACCTGCCACTaGGGTCCTCTGGGTGAAGACCTCTGTCAGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HSGRGSLWLTCH*GPLGEDLCQPR Trigger: CCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTGCCTCTCCCACTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR TCA 72 bp | GTCACCCCCATGTGGGCACAGGAGTGGTGTGAAGGTTaGCTCCCTGGCACATGTGGTGGCAGCAGGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VTPMWAQEWCEG*LPGTCGGSRSE Trigger: CTCAGACCTGCTGCCACCACATGTGCCAGGGAGTCAACCTTCACACCACTCCTGTGCCCACATGGGGGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR TCA 72 bp | TCCTGTGGTCACCCCCATGTGGGCACAGGAGTGGTGTaGAGGTTGACTCCCTGGCACATGTGGTGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SCGHPHVGTGVV*RLTPWHMWWQQ Trigger: CTGCTGCCACCACATGTGCCAGGGAGTCAACCTTCACACCACTCCTGTGCCCACATGGGGGTGACCACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 72 bp | CTGTCAGCCCAGGATTGGTGGGAAACGGTGCAAAACTaGCCACGCTCTCCATCCCTGCCTGCATGGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: LSAQDWWETVQN*PRSPSLPAWDS Trigger: GGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 72 bp | GAGGCAGTCTGTGGCTTACCTGCCACTGCGGTCCTCTaGGTGAAGACCTCTGTCAGCCCAGGATTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: EAVCGLPATAVL*VKTSVSPGLVG Trigger: TCCCACCAATCCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 72 bp | GAGCCTCAGGAGTCACACAGTGGGAGAGGCAGTCTGTaGCTTACCTGCCACTGCGGTCCTCTGGGTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EPQESHSGRGSL*LTCHCGPLGED Trigger: GTCTTCACCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTGCCTCTCCCACTGTGTGACTCCTGAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR TCA 72 bp | CAGTCTGTGGCTTACCTGCCACTGCGGTCCTCTGGGTaGAGACCTCTGTCAGCCCAGGATTGGTGGGAAACG | + |
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Preference number: 3 (lower is better) Translates to: QSVAYLPLRSSG*RPLSAQDWWET Trigger: CGTTTCCCACCAATCCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 72 bp | GGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTaGCTGCATGGGACTCCTGTGGAAACACCTTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GKRCKTAHALHP*LHGTPVETPCG Trigger: GCCACAAGGTGTTTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 72 bp | GAGTCACACAGTGGGAGAGGCAGTCTGTGGCTTACCTaGCACTGCGGTCCTCTGGGTGAAGACCTCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ESHSGRGSLWLT*HCGPLGEDLCQ Trigger: CTGACAGAGGTCTTCACCCAGAGGACCGCAGTGGCAGGTAAGCCACAGACTGCCTCTCCCACTGTGTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 72 bp | GTGCAAAACTGCCCACGCTCTCCATCCCTGCCTGCATaGGACTCCTGTGGAAACACCTTGTGGCCCAGATCT | + |
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Preference number: 3 (lower is better) Translates to: VQNCPRSPSLPA*DSCGNTLWPRS Trigger: AGATCTGGGCCACAAGGTGTTTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CCA 72 bp | TGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTaGGAGAGGCAGTCTGTGGCTTACCTGCCACTGCGG | + |
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Preference number: 3 (lower is better) Translates to: CRSNPRASGVTQ*ERQSVAYLPLR Trigger: CCGCAGTGGCAGGTAAGCCACAGACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR GCA 72 bp | CACAGGCTTAGAGCATCCTCTCAGCTGTTCCTGGCATaGCTGCTCTCTGTATCAAAGGCAGCCTCCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: HRLRASSQLFLA*LLSVSKAASLP Trigger: TGGGAGGGAGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTCTAAGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR TCA 72 bp | ATGGGACTCCTGTGGAAACACCTTGTGGCCCAGATCTaGGTCCCAGCCTTGAGGGATCCTAAGAGCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: MGLLWKHLVAQI*VPALRDPKSCL Trigger: CAAGCAGCTCTTAGGATCCCTCAAGGCTGGGACTCAGATCTGGGCCACAAGGTGTTTCCACAGGAGTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTATGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTGGGAGAGGCAGTTCTGTCAGCCCAGGATaGGTGGGAAACGGTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: IYVDQTHEPQESHSGRGSSVSPG*VGNGAK Trigger: TTTTGCACCGTTTCCCACCAATCCTGGGCTGACAGA...ACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| 3UTR CAA 72 bp | GCGGTCCTCTGGGTGAAGACCTCTGTCAGCCCAGGATaGGTGGGAAACGGTGCAAAACTGCCCACGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AVLWVKTSVSPG*VGNGAKLPTLS Trigger: GGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGATTGGTGGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTGCCAGCGAGTGCCTAGGGTaGACCTCTAACTCTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SPGLVGNGAKLPTLSIPASECLG*TSNSVE Trigger: TTCCACAGAGTTAGAGGTGCACCCTAGGCACTCGCT...GGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | GGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCACAGGCTTAAGATCCAGGACCACCTaGTCCTTCCAGCGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GSRSEVSDSSVVVGFTGLRSRTT*SFQRPP Trigger: GGGAGGCCGCTGGAAGGAGCAGGTGGTCCTGGATCT...TAAGCCTGTGAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCCCAGCGGCTGGCTCGTaGTGGAGCCTATCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFPAAGS*WSLSWP Trigger: TGGCCATGATAGGCTCCACCACGAGCCAGCCGCTGG...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTGCCTGCATGGGACTGGTCCCTGCATCGTGTaGATAAAGATCCAGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: GGKRCKTAHALHPCLHGTGPCIV*IKIQDH Trigger: GTGGTCCTGGATCTTTATCCACACGATGCAGGGACC...AGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | TGGTCACCCCCATGTGGGCACAGGAGTGGTGTGAAGGTTGACTCCCTGGCACATGTACTGCTTGGGAAATaGTGTCTGGCTCCACTTGCC | + |
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Preference number: 4 (lower is better) Translates to: WSPPCGHRSGVKVDSLAHVLLGK*CLAPLA Trigger: GGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTAC...ATGTGCCAGGGAGTCAACCTTCACACCACTCCTGTGCCCACATGGGGGTGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | GAGCATCCTCTCAGCTGTTCCTGGCATGCCTGCTCTCTGTATCAAAGGCAGCCTACAGGGGGTACTGCTTaGGAAATGCTGTCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EHPLSCSWHACSLYQRQPTGGTA*EMLSGS Trigger: GGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGT...AGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCGCACCTCTAACTCTGTaGAAGTCTGCCCGGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFAPLTL*KSARYR Trigger: GCGGTACCGGGCAGACTTCCACAGAGTTAGAGGTGC...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | CGGTGCAAAACTGCCCACGCTCTCCATCCCTGCCTGCATGGGACTCCTGTGGAATTGGGAAATGCTGTCTaGCTCCACTTGCCAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: RCKTAHALHPCLHGTPVELGNAV*LHLPMK Trigger: TTTCATTGGCAAGTGGAGCCAGACAGCATTTCCCAA...TTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | ACACGACCTTTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCCAGGTCCAGGGAAGGTaGGGCAAAGGCCCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: TRPLFECKGINDTQGPSFQVQGR*GKGPGT Trigger: AGTCCCAGGGCCTTTGCCCCACCTTCCCTGGACCTG...GAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGTCCCAACTTTCCACATaGTCCTCCACACAGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PGTCGGSRSEVSDSSVVVSQLST*SSTQSP Trigger: TGGGGACTGTGTGGAGGACCATGTGGAAAGTTGGGA...CACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | TTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAAAACTGCAGAGAGGACCACTGTaGAGGGGGCCGGAACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LFECKGINDTQGPSFEKLQRGPL*RGPEQG Trigger: CCCCTGTTCCGGCCCCCTGCACAGTGGTCCTCTCTG...CAGTTTTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGATTGGTGGGAAACGGTGCAAAACTGCCCACGCTCTCCATCCCTGCCAGTCACTGTGTCTTGTaGGATAGTTGCAAAGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SPGLVGNGAKLPTLSIPASHCVL*DSCKVR Trigger: CCTAACTTTGCAACTATCCCACAAGACACAGTGACT...GGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACCAATCCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | AAACTGCCCCTCTTCGTTTGTTCCTCCTGTGGTCACCCCCATGTGGGCACAGGACTGAAGTTTCTCTCCTaGAGCTTCGATCTCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KLPLFVCSSCGHPHVGTGLKFLS*SFDLLH Trigger: ATGAAGGAGATCGAAGCTGCAGGAGAGAAACTTCAG...TCCTGTGCCCACATGGGGGTGACCACAGGAGGAACAAACGAAGAGGGGCAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | GACCTTTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAATTTCGTTGCCTCGGCTaGCCAGGTCCAGGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: DLYSNARGSTTHKGQVSKFRCLG*PGPGKV Trigger: CACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAA...TTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | TTCACAGGCTTAGAGCATCCTCTCAGCTGTTCCTGGCATGCCTGCTCTCTGTATTTAGACGCAGTTATCTaGGGCACACTCGGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FTGLEHPLSCSWHACSLYLDAVI*GTLGLF Trigger: GAAGAGGCCGAGTGTGCCCCAGATAACTGCGTCTAA...ATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTCTAAGCCTGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | TTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAAAACTGGTCAGAGCTGTGAGCTaGCCCCAGCAGAGAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LFECKGINDTQGPSFEKLVRAVS*PQQRGP Trigger: TGGTCCTCTCTGCTGGGGGCAGCTCACAGCTCTGAC...CAGTTTTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | GACCTTTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAAGATCTCCTTCATCAGTaGCCAGGCCTCACCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: DLYSNARGSTTHKGQVSKDLLHQ*PGLTTL Trigger: GAGCGTGGTGAGGCCTGGGCACTGATGAAGGAGATC...TTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | TTATGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTGGGAGAGGCAGTCTAATTTGCTGGGTGGCTaGGCGATGAGGCTGTTATCT | + |
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Preference number: 4 (lower is better) Translates to: LCRSNPRASGVTQWERQSNLLGG*AMRLLS Trigger: AGATAACAGCCTCATCGCCCAGCCACCCAGCAAATT...AGACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCTCCCTCCCACCACAGTAATAAATTACAAGGGAATTTATGTAGATCAAGTGGGGCAAAGGCCCTaGGACTCTGCTGTAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GSLPPTTVINYKGIYVDQVGQRP*DSAVAA Trigger: TGCGGCTACAGCAGAGTCCCAGGGCCTTTGCCCCAC...TTGATCTACATAAATTCCCTTGTAATTTATTACTGTGGTGGGAGGGAGGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR TCA 90 bp | ACACGACCTTTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCTGGGAGGTAAGGACTTaGGGCGTGGGTAGTAGAATG | + |
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Preference number: 4 (lower is better) Translates to: TRPLFECKGINDTQGPSFWEVRT*GVGSRM Trigger: CATTCTACTACCCACGCCTCAAGTCCTTACCTCCCA...GAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR GCA 90 bp | TTATTCGAATGCAAGGGGATCAACGACACACAAGGGCCAAGTTTCGAAAAACTGAGACCCAAAGAGCTCTaGCCAGGGCAAGACTCACGT | + |
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Preference number: 4 (lower is better) Translates to: LFECKGINDTQGPSFEKLRPKEL*PGQDSR Trigger: ACGTGAGTCTTGCCCTGGGCAGAGCTCTTTGGGTCT...CAGTTTTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 90 bp | CGGCTGGCCAGGTCCAGGGAAGGTGGGGCAAAGGCCCTGGGACTCTaGTGTAGCCGCACGAAGGTCACTTTGGCGATGGGAGGTAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RLARSREGGAKALGL*CSRTKVTLAMGGKD Trigger: GTCCTTACCTCCCATCGCCAAAGTGACCTTCGTGCGGCTACAGCAGAGTCCCAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 90 bp | GACACCAGCGAGTGCCTAGGGTGCACCTCTAACTCTGTGGAAGTCTaGCCGGTACCGCTAGGGATGGCAGGAGCTGAGAACACTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: DTSECLGCTSNSVEV*PVPLGMAGAENTAC Trigger: GCACGCAGTGTTCTCAGCTCCTGCCATCCCTAGCGGTACCGGGCAGACTTCCACAGAGTTAGAGGTGCACCCTAGGCACTCGCTGGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS GCA 90 bp | CAGTCAGGGCTGGGGACAATGCGTACCACGAAGGACACCAGCGAGTaGCTAGGGTGCACCTCTAACTCTGTGGAAGTCTGCCCGGTACCG | + |
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Preference number: 5 (lower is better) Translates to: QSGLGTMRTTKDTSE*LGCTSNSVEVCPVP Trigger: CGGTACCGGGCAGACTTCCACAGAGTTAGAGGTGCACCCTAGGCACTCGCTGGTGTCCTTCGTGGTACGCATTGTCCCCAGCCCTGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS GCA 90 bp | AGTCCAGCGGTGTCTCTGGAACTGAAAGGCTGTCAACGATTTCGTTaGCTCGGCTGGCCAGGTCCAGGGAAGGTGGGGCAAAGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPAVSLELKGCQRFR*LGWPGPGKVGQRPW Trigger: CCAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACACCGCTGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 90 bp | CTGGGGACAATGCGTACCACGAAGGACACCAGCGAGTGCCTAGGGTaGACCTCTAACTCTGTGGAAGTCTGCCCGGTACCGCTAGGGATG | + |
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Preference number: 5 (lower is better) Translates to: LGTMRTTKDTSECLG*TSNSVEVCPVPLGM Trigger: CATCCCTAGCGGTACCGGGCAGACTTCCACAGAGTTAGAGGTGCACCCTAGGCACTCGCTGGTGTCCTTCGTGGTACGCATTGTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS CCA 90 bp | GTGTCTCTGGAACTGAAAGGCTGTCAACGATTTCGTTGCCTCGGCTaGCCAGGTCCAGGGAAGGTGGGGCAAAGGCCCTGGGACTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VSLELKGCQRFRCLG*PGPGKVGQRPWDSA Trigger: AGCAGAGTCCCAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 90 bp | CCCAGCAGAGAGGACCACTGTGCAGGGGGCCGGAACAGGGGGTACTaGTTGGGAAATGCTGTCTGGCTCCACTTGCCAATGAAAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: PSREDHCAGGRNRGY*LGNAVWLHLPMKVM Trigger: CATCACTTTCATTGGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCACAGTGGTCCTCTCTGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS-3UTR CAA 90 bp | GAGCATCCTCTCAGCTGTTCCTGGCATGCCTGCTCTCTGTATCAAAGGCAGCCTCTGTCAACGATTTCGTaGCCTCGGCTGGCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: EHPLSCSWHACSLYQRQPLSTIS*PRLARS Trigger: GGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAG...AGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGGAACAGCTGAGAGGATGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS TCA 90 bp | GTGCCCAGGCCTCACCACGCTCAGCAAAGTCCCTCAGCCCATTGCTaGCATACTCATTCTTCCGCCACATGCTGTAGTCAGAGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: VPRPHHAQQSPSAHC*HTHSSATCCSQSCE Trigger: CTCACAGCTCTGACTACAGCATGTGGCGGAAGAATGAGTATGTCAGCAATGGGCTGAGGGACTTTGCTGAGCGTGGTGAGGCCTGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS TCA 90 bp | GCTGTAGCCGCACGAAGGTCACTTTGGCGATGGGAGGTAAGGACTTaGGGCGTGGGTAGTAGAATGAATTTGCTGGGTGGCTGGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: AVAARRSLWRWEVRT*GVGSRMNLLGGWAM Trigger: CATCGCCCAGCCACCCAGCAAATTCATTCTACTACCCACGCCTCAAGTCCTTACCTCCCATCGCCAAAGTGACCTTCGTGCGGCTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CAA 90 bp | AAACTGCCCACGCTCTCCATCCCTGCCTGCATGGGACTCCTGTGGAAACACCTTAACAGGGGGTACTGCTaGGGAAATGCTGTCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KLPTLSIPACMGLLWKHLNRGYC*GNAVWL Trigger: GAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTT...AAGGTGTTTCCACAGGAGTCCCATGCAGGCAGGGATGGAGAGCGTGGGCAGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS TCA 90 bp | GTACCGCTAGGGATGGCAGGAGCTGAGAACACTGCGTGCACACTCTaGAGTTTCTCTCCTGCAGCTTCGATCTCCTTCATCAGTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VPLGMAGAENTACTL*SFSPAASISFISAQ Trigger: CTGGGCACTGATGAAGGAGATCGAAGCTGCAGGAGAGAAACTTCAGAGTGTGCACGCAGTGTTCTCAGCTCCTGCCATCCCTAGCGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCCGCACGAAGGTCACTTaGGCGATGGGAGGTAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFRTKVT*AMGGKD Trigger: GTCCTTACCTCCCATCGCCAAAGTGACCTTCGTGCG...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 90 bp | AGTTGCAAAGTTAGGGGAGGAGAAGGTGAAACCACTGTCGGTCCCTaGATCGTGTGGATAAAGATCCAGGACCACCTGCTCCTTCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SCKVRGGEGETTVGP*IVWIKIQDHLLLPA Trigger: CGCTGGAAGGAGCAGGTGGTCCTGGATCTTTATCCACACGATGCAGGGACCGACAGTGGTTTCACCTTCTCCTCCCCTAACTTTGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CAA 90 bp | ACATGTGGTGGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCGCTGTCTGGCTCCACTaGCCAATGAAAGTGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: TCGGSRSEVSDSSVVVGFAVWLH*PMKVML Trigger: CAGCATCACTTTCATTGGCAAGTGGAGCCAGACAGC...GAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCCACCACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CAA 90 bp | GGCAGCAGGTCTGAGGTATCTGACAGCAGTGTAGTTGTGGGGTTCACAGGCTTAGGTAGTAGAATGAATTaGCTGGGTGGCTGGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: GSRSEVSDSSVVVGFTGLGSRMN*LGGWAM Trigger: CATCGCCCAGCCACCCAGCAAATTCATTCTACTACC...TAAGCCTGTGAACCCCACAACTACACTGCTGTCAGATACCTCAGACCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS-3UTR CAA 90 bp | TTATGTAGATCAAACCCACGAGCCTCAGGAGTCACACAGTGGGAGAGGCAGTCTAAGTCCCTCAGCCCATaGCTGACATACTCATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LCRSNPRASGVTQWERQSKSLSP*LTYSFF Trigger: GAAGAATGAGTATGTCAGCAATGGGCTGAGGGACTT...AGACTGCCTCTCCCACTGTGTGACTCCTGAGGCTCGTGGGTTTGATCTACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 72 bp | AGGTCCAGGGAAGGTGGGGCAAAGGCCCTGGGACTCTaGTGTAGCCGCACGAAGGTCACTTTGGCGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: RSREGGAKALGL*CSRTKVTLAMG Trigger: TCCCATCGCCAAAGTGACCTTCGTGCGGCTACAGCAGAGTCCCAGGGCCTTTGCCCCACCTTCCCTGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS CAA 90 bp | CAGTCCAGCGGTGTCTCTGGAACTGAAAGGCTGTCAACGATTTCGTaGCCTCGGCTGGCCAGGTCCAGGGAAGGTGGGGCAAAGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QSSGVSGTERLSTIS*PRLARSREGGAKAL Trigger: CAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACACCGCTGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 72 bp | GAGGACCACTGTGCAGGGGGCCGGAACAGGGGGTACTaGTTGGGAAATGCTGTCTGGCTCCACTTGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: EDHCAGGRNRGY*LGNAVWLHLPM Trigger: CATTGGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCACAGTGGTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS GCA 72 bp | TCCAGCGGCCTCCCTCACACAGGTCCAGACTGTCGATaGCCACAAACCAGTCAGGGCTGGGGACAATGCGTA | + |
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Preference number: 6 (lower is better) Translates to: SSGLPHTGPDCR*PQTSQGWGQCV Trigger: TACGCATTGTCCCCAGCCCTGACTGGTTTGTGGGCATCGACAGTCTGGACCTGTGTGAGGGAGGCCGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS CCA 72 bp | GAACTGAAAGGCTGTCAACGATTTCGTTGCCTCGGCTaGCCAGGTCCAGGGAAGGTGGGGCAAAGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ELKGCQRFRCLG*PGPGKVGQRPW Trigger: CCAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 72 bp | ATGCGTACCACGAAGGACACCAGCGAGTGCCTAGGGTaGACCTCTAACTCTGTGGAAGTCTGCCCGGTACCG | + |
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Preference number: 6 (lower is better) Translates to: MRTTKDTSECLG*TSNSVEVCPVP Trigger: CGGTACCGGGCAGACTTCCACAGAGTTAGAGGTGCACCCTAGGCACTCGCTGGTGTCCTTCGTGGTACGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS CCA 72 bp | GGTCCAGACTGTCGATGCCCACAAACCAGTCAGGGCTaGGGACAATGCGTACCACGAAGGACACCAGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPDCRCPQTSQG*GQCVPRRTPAS Trigger: ACTCGCTGGTGTCCTTCGTGGTACGCATTGTCCCCAGCCCTGACTGGTTTGTGGGCATCGACAGTCTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS CAA 72 bp | GGTGTCTCTGGAACTGAAAGGCTGTCAACGATTTCGTaGCCTCGGCTGGCCAGGTCCAGGGAAGGTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GVSGTERLSTIS*PRLARSREGGA Trigger: TGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS CAA 90 bp | AGCAGAGAGGACCACTGTGCAGGGGGCCGGAACAGGGGGTACTGCTaGGGAAATGCTGTCTGGCTCCACTTGCCAATGAAAGTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SREDHCAGGRNRGYC*GNAVWLHLPMKVML Trigger: CAGCATCACTTTCATTGGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCACAGTGGTCCTCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS TCA 72 bp | GGAAGTCTGCCCGGTACCGCTAGGGATGGCAGGAGCTaGGAACACTGCGTGCACACTCTGAAGTTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSLPGTARDGRS*EHCVHTLKFLS Trigger: GGAGAGAAACTTCAGAGTGTGCACGCAGTGTTCTCAGCTCCTGCCATCCCTAGCGGTACCGGGCAGACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS GCA 72 bp | GTGTCTCTGGAACTGAAAGGCTGTCAACGATTTCGTTaGCTCGGCTGGCCAGGTCCAGGGAAGGTGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: VSLELKGCQRFR*LGWPGPGKVGQ Trigger: TTGCCCCACCTTCCCTGGACCTGGCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS CAA 72 bp | GACCACTGTGCAGGGGGCCGGAACAGGGGGTACTGCTaGGGAAATGCTGTCTGGCTCCACTTGCCAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: DHCAGGRNRGYC*GNAVWLHLPMK Trigger: TTTCATTGGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCACAGTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS TCA 72 bp | CAGGGAAACCTCACAGTCCAGCGGTGTCTCTGGAACTaGAAGGCTGTCAACGATTTCGTTGCCTCGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QGNLTVQRCLWN*KAVNDFVASAG Trigger: GCCAGCCGAGGCAACGAAATCGTTGACAGCCTTTCAGTTCCAGAGACACCGCTGGACTGTGAGGTTTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS TCA 72 bp | CAACTTTCCACATGGTCCTCCACACAGTCCCCAGGATaGCCACAGGGAAACCTCACAGTCCAGCGGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: QLSTWSSTQSPG*PQGNLTVQRCL Trigger: GAGACACCGCTGGACTGTGAGGTTTCCCTGTGGTCATCCTGGGGACTGTGTGGAGGACCATGTGGAAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 72 bp | TGCAGGGGGCCGGAACAGGGGGTACTGCTTGGGAAATaGTGTCTGGCTCCACTTGCCAATGAAAGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: CRGPEQGVLLGK*CLAPLANESDA Trigger: AGCATCACTTTCATTGGCAAGTGGAGCCAGACAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS CCA 72 bp | GGAGAAGGTGAAACCACTGTCGGTCCCTGCATCGTGTaGATAAAGATCCAGGACCACCTGCTCCTTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GEGETTVGPCIV*IKIQDHLLLPA Trigger: CGCTGGAAGGAGCAGGTGGTCCTGGATCTTTATCCACACGATGCAGGGACCGACAGTGGTTTCACCTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS GCA 72 bp | GTTAGGGGAGGAGAAGGTGAAACCACTGTCGGTCCCTaGATCGTGTGGATAAAGATCCAGGACCACCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VRGGEGETTVGP*IVWIKIQDHLL Trigger: GAGCAGGTGGTCCTGGATCTTTATCCACACGATGCAGGGACCGACAGTGGTTTCACCTTCTCCTCCCCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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| CDS TCA 72 bp | CCTCACCACGCTCAGCAAAGTCCCTCAGCCCATTGCTaGCATACTCATTCTTCCGCCACATGCTGTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PHHAQQSPSAHC*HTHSSATCCSQ Trigger: CTGACTACAGCATGTGGCGGAAGAATGAGTATGTCAGCAATGGGCTGAGGGACTTTGCTGAGCGTGGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS TCA 72 bp | GGGATGGCAGGAGCTGAGAACACTGCGTGCACACTCTaGAGTTTCTCTCCTGCAGCTTCGATCTCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GMAGAENTACTL*SFSPAASISFI Trigger: GATGAAGGAGATCGAAGCTGCAGGAGAGAAACTTCAGAGTGTGCACGCAGTGTTCTCAGCTCCTGCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046186.8 ENSMUST00000201475.2 |
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| CDS TCA 72 bp | GCACGAAGGTCACTTTGGCGATGGGAGGTAAGGACTTaGGGCGTGGGTAGTAGAATGAATTTGCTGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ARRSLWRWEVRT*GVGSRMNLLGG Trigger: GCCACCCAGCAAATTCATTCTACTACCCACGCCTCAAGTCCTTACCTCCCATCGCCAAAGTGACCTTCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046186.8 |
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