Pregenerated sensors for SPON1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038156Ensembl transcript IDs: ENSMUST00000046687.16, ENSMUST00000084696.6
Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CAGAACAGCAGGACCCACCTGGGCCGGCTGTCACAGCTGCTCAGGTaGCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCT | + |
Preference number: 1 (lower is better) Translates to: QNSRTHLGRLSQLLR*QPRFPGPHHYCPCP Trigger: AGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCTGCTGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | CCTGGGCCGGCTGTCACAGCTGCTCAGGTGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACAT | + |
Preference number: 1 (lower is better) Translates to: PGPAVTAAQVPTQIP*APPLLSLPFCPWIH Trigger: ATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 90 bp | GGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTaGTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACC | + |
Preference number: 1 (lower is better) Translates to: GCVSCMLHSGTREHG*FSLWMWPGSSPCLT Trigger: GGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | AATAGGGTGACTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTaGTGTCCAGATGGTAGGCTTCGGAGAAGCACTGTGTCAGGTCTG | + |
Preference number: 1 (lower is better) Translates to: NRVTSAACSPGLWAA*CPDGRLRRSTVSGL Trigger: CAGACCTGACACAGTGCTTCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | TGGTGTCCAGATGGTAGGCTTCGGAGAAGCACTGTGTCAGGTCTGTaGTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATC | + |
Preference number: 1 (lower is better) Translates to: WCPDGRLRRSTVSGL*SPPQSVEAFEQTPI Trigger: GATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGCTTCTCCGAAGCCTACCATCTGGACACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTaGTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGG | + |
Preference number: 1 (lower is better) Translates to: ITELSWIFKALGGGW*CLLREALSGAGRKW Trigger: CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | TGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTTGTaGATGTGGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATGTTC | + |
Preference number: 1 (lower is better) Translates to: CMLHSGTREHGCFSL*MWPGSSPCLTRGMF Trigger: GAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | CAGATTCAGTACAAAGGTGTGCACTACAAAGCAGTGAGGGGCAGGTaGAGTAGAGCTGGCTGCTGGGAGACCCACTCTCTGCGTGAGAAC | + |
Preference number: 1 (lower is better) Translates to: QIQYKGVHYKAVRGR*SRAGCWETHSLREN Trigger: GTTCTCACGCAGAGAGTGGGTCTCCCAGCAGCCAGCTCTACTCCACCTGCCCCTCACTGCTTTGTAGTGCACACCTTTGTACTGAATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | TGGCAGGAAGTGGGATGGGGGTGCGGAGTTGGGCAGGTGCATAGGTaGGAAGTCGCTTATTCAATGTCATGGGGCCCATGCTGTGAAATT | + |
Preference number: 1 (lower is better) Translates to: WQEVGWGCGVGQVHR*EVAYSMSWGPCCEI Trigger: AATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTGCCCAACTCCGCACCCCCATCCCACTTCCTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | CAAGGTGAGCCAACACTACTCACTCAGTGTAGGAAGAGGGCCACCTaGGGACAAGGATGCCCCACTTGGCCTGCACTCACCAAGAAGAAT | + |
Preference number: 1 (lower is better) Translates to: QGEPTLLTQCRKRAT*GQGCPTWPALTKKN Trigger: ATTCTTCTTGGTGAGTGCAGGCCAAGTGGGGCATCCTTGTCCTCAGGTGGCCCTCTTCCTACACTGAGTGAGTAGTGTTGGCTCACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR TCA 90 bp | ATGGTTGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTaGCCAGGGGGATGTTCCAGAGGGACACAAGGTGAGCCAACACTA | + |
Preference number: 1 (lower is better) Translates to: MVAFPCGCGQGLHPA*PGGCSRGTQGEPTL Trigger: TAGTGTTGGCTCACCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR TCA 90 bp | GGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAGTGTCCTGCACTGTaGAATAGCCACACCCTAAACACAGCCTGCCCTTTCCTTGCCCCA | + |
Preference number: 1 (lower is better) Translates to: GWKKRRTVASQCPAL*NSHTLNTACPFLAP Trigger: TGGGGCAAGGAAAGGGCAGGCTGTGTTTAGGGTGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | ACTGTGGTCTACAAAGATCCCTCAGGGCATCATGAAGGAATAGGGTaGCTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTC | + |
Preference number: 1 (lower is better) Translates to: TVVYKDPSGHHEGIG*LQLHAVQDCGQPGV Trigger: GACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTAGACCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | CTCAGGTGCCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTaGCCTTCTGTCCCTGGATACATGCATTGGATACATACATCGCCT | + |
Preference number: 1 (lower is better) Translates to: LRCQPRFPGPHHYCP*PSVPGYMHWIHTSP Trigger: AGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | CCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTaGATACATACATCGCCTCTGAGCCCATGGGGGTTCGAAAGCAGG | + |
Preference number: 1 (lower is better) Translates to: PHHYCPCPSVPGYMH*IHTSPLSPWGFESR Trigger: CCTGCTTTCGAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | CTGAAGAGTTATGTCTCTTGTGAGGCATGGCAGAGTAGGAGAAACTaGGCAATTGGAAGGCTGGCGCTGTGGGCTGGAGTTGGAGTTCAG | + |
Preference number: 1 (lower is better) Translates to: LKSYVSCEAWQSRRN*AIGRLALWAGVGVQ Trigger: CTGAACTCCAACTCCAGCCCACAGCGCCAGCCTTCCAATTGCCCAGTTTCTCCTACTCTGCCATGCCTCACAAGAGACATAACTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | GTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTaGTTGCAGGCAGACCTTGCAAAGAAAGCACAGCACAGAGTCTTT | + |
Preference number: 1 (lower is better) Translates to: VSRVQKASKKVCPFC*LQADLAKKAQHRVF Trigger: AAAGACTCTGTGCTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | CAACATCACAGGAGCACCATACATATGGGGCTTCCTCCATCATCTTaGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAGT | + |
Preference number: 1 (lower is better) Translates to: QHHRSTIHMGLPPSS*EMQGGRKEGQWPLS Trigger: ACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTGTGATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | GGAGTTGGGCAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATaGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTTGAAACTC | + |
Preference number: 1 (lower is better) Translates to: GVGQVHRWEVAYSMS*GPCCEIHSIAILKL Trigger: GAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTGCCCAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | CTGAACAGTAAATCCCTCAAGGCATGTAAATTAAGGATCAGCAAATaGGGCTGGAACAGTGGACCAGTGGGTAAAGTGCCTGCTTCAGGG | + |
Preference number: 1 (lower is better) Translates to: LNSKSLKACKLRISK*GWNSGPVGKVPASG Trigger: CCCTGAAGCAGGCACTTTACCCACTGGTCCACTGTTCCAGCCCCATTTGCTGATCCTTAATTTACATGCCTTGAGGGATTTACTGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | CAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATGGGGCCCATaGTGTGAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGAT | + |
Preference number: 1 (lower is better) Translates to: QVHRWEVAYSMSWGP*CEIHSIAILKLSSD Trigger: ATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | CACAGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATGGGGGTaGCGCTGGGGCATGTCTGCTTGGAGCTCTATAATTTATACACTA | + |
Preference number: 1 (lower is better) Translates to: HSIAILKLSSDLEWG*RWGMSAWSSIIYTL Trigger: TAGTGTATAAATTATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 90 bp | TATGAAACCCTAAATCACAGTTTCTGTCTCAGGAGACCTGAGGTCTaGCTTTCCAACAACAAGCCTACAGCAGGGTTTAGCATACCAAAG | + |
Preference number: 1 (lower is better) Translates to: YETLNHSFCLRRPEV*LSNNKPTAGFSIPK Trigger: CTTTGGTATGCTAAACCCTGCTGTAGGCTTGTTGTTGGAAAGGCAGACCTCAGGTCTCCTGAGACAGAAACTGTGATTTAGGGTTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | GGATGTTGCAAAGTAGGCGGGACAGATCCTTTAGCAGAGCATTTATaGGGAGGGTGGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACT | + |
Preference number: 1 (lower is better) Translates to: GCCKVGGTDPLAEHL*GGWKSKPLISLFCT Trigger: AGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCCGCCTACTTTGCAACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | GAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATaGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCTATAATTTAT | + |
Preference number: 1 (lower is better) Translates to: EIHSIAILKLSSDLE*GWRWGMSAWSSIIY Trigger: ATAAATTATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | AAAGTAGGCGGGACAGATCCTTTAGCAGAGCATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACTCCTTTGAAG | + |
Preference number: 1 (lower is better) Translates to: KVGGTDPLAEHLWGG*KSKPLISLFCTPLK Trigger: CTTCAAAGGAGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCCGCCTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | AGGGCTGAGGACAGAGAATTTGTTGAAGTTTTCAAACAAGTCCTCTaGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTC | + |
Preference number: 1 (lower is better) Translates to: RAEDREFVEVFKQVL*LCRGHISILGRPVF Trigger: GAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTCTCTGTCCTCAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | CATTCTGTCTACTTTGGGCAATATGAACAAGAAGAATGGGGATATTaGAATCGACCTTGCCAAGTAGCAACATGGTGGAAATGGCTGGCT | + |
Preference number: 1 (lower is better) Translates to: HSVYFGQYEQEEWGY*NRPCQVATWWKWLA Trigger: AGCCAGCCATTTCCACCATGTTGCTACTTGGCAAGGTCGATTTCAATATCCCCATTCTTCTTGTTCATATTGCCCAAAGTAGACAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 90 bp | GAGGACAGAGAATTTGTTGAAGTTTTCAAACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTC | + |
Preference number: 1 (lower is better) Translates to: EDREFVEVFKQVLWL*RGHISILGRPVFLL Trigger: GAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTCTCTGTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 90 bp | AGTGTAGTGTGTGTGTGTGTGTGTATACACTCCACAGCACACATATaGAAATTAGAGGACAACGTTACGGAGTTGTGTCTTAGTGTTTCT | + |
Preference number: 1 (lower is better) Translates to: SVVCVCVCIHSTAHI*KLEDNVTELCLSVS Trigger: AGAAACACTAAGACACAACTCCGTAACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGAGTGTATACACACACACACACACACTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | ACATTTAGACTTCAAATCAAATGGAGGAGAAACATAAGCTCATTCTaGAGATGTTCTCACACTGTGGTCTACAAAGATCCCTCAGGGCAT | + |
Preference number: 1 (lower is better) Translates to: TFRLQIKWRRNISSF*RCSHTVVYKDPSGH Trigger: ATGCCCTGAGGGATCTTTGTAGACCACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGAAGTCTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | CTAGGAAGACCCGTCTTCTTGCTCCTTTTTATGTTGCTTCCTCCTTaGCTTATAGAAAAATATAAGTTGTGTGCTTTCAGGGAAGGATAT | + |
Preference number: 1 (lower is better) Translates to: LGRPVFLLLFMLLPP*LIEKYKLCAFREGY Trigger: ATATCCTTCCCTGAAAGCACACAACTTATATTTTTCTATAAGTCAAGGAGGAAGCAACATAAAAAGGAGCAAGAAGACGGGTCTTCCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 90 bp | AAATTGACTCAATATCTGATTGGGAAACATCTTACAATGTGGGTTTaGCCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAC | + |
Preference number: 1 (lower is better) Translates to: KLTQYLIGKHLTMWV*PDYSWFGVGVKYIY Trigger: GTATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGAGTCAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 90 bp | GATCTTGAATTTATTTTGCCGGCTTCATTATTTCTTTGTAACAAATaGTTTTCAGTATCCCATTCCTCAGAGCTGGACAATCACAATTTC | + |
Preference number: 1 (lower is better) Translates to: DLEFILPASLFLCNK*FSVSHSSELDNHNF Trigger: GAAATTGTGATTGTCCAGCTCTGAGGAATGGGATACTGAAAACCATTTGTTACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGGCTGTGTCTCCTGCATaGTGCATTCTGGCACCCGAG | + |
Preference number: 2 (lower is better) Translates to: RGKARRSVLTPEQQDPPGAVSPA*CILAPE Trigger: CTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGC...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCC | + |
Preference number: 2 (lower is better) Translates to: RGKARRSVLTPEQQDPPGPTQIP*APPLLS Trigger: GGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCTCTGGACTGTCCATaGAAACCAGGGCCCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGPLDCP*KPGPWS Trigger: GGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGATGGGGCCCATGCTGTaGAATTCACAGCATTGCCAT | + |
Preference number: 2 (lower is better) Translates to: GGWCCLLREALSGAGRKWMGPML*NSQHCH Trigger: ATGGCAATGCTGTGAATTTCACAGCATGGGCCCCAT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 90 bp | TCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATG | + |
Preference number: 2 (lower is better) Translates to: SCMLHSGTREHGCFS*WMWPGSSPCLTRGM Trigger: CATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGATGTTCTCACACTGTaGTCTACAAAGATCCCTCAG | + |
Preference number: 2 (lower is better) Translates to: GGWCCLLREALSGAGRKWDVLTL*STKIPQ Trigger: CTGAGGGATCTTTGTAGACCACAGTGTGAGAACATC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 90 bp | TGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTaGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTGAC | + |
Preference number: 2 (lower is better) Translates to: WLCLLHAAFWHPRTW*LFLVDVARVFTLLD Trigger: GTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | GCTCAGGTGCCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTaGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATCGCC | + |
Preference number: 2 (lower is better) Translates to: AQVPTQIPWAPPLLS*PFCPWIHALDTYIA Trigger: GGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAACAATAGACGGGTTGTaGTGGGTTTCCAGAGTGCAG | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGTIDGL*WVSRVQ Trigger: CTGCACTCTGGAAACCCATCACAACCCGTCTATTGT...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGGACAGGCTGTCCCTTaGCATCATAAGACTATTGGG | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGGQAVP*HHKTIG Trigger: CCCAATAGTCTTATGATGCCAAGGGACAGCCTGTCC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | GCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATaGGATACATACATCGCCTCTGAGCCCATGGGGGTTCGAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: APPLLSLPFCPWIHA*DTYIASEPMGVRKQ Trigger: CTGCTTTCGAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | TTCGGAGAAGCACTGTGTCAGGTCTGTGCTCACCCCCTCAGTCTGTaGAGGCCTTTGAGCAAACACCCATCACAACATCACAGGAGCACC | + |
Preference number: 2 (lower is better) Translates to: FGEALCQVCAHPLSL*RPLSKHPSQHHRST Trigger: GGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGCTTCTCCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTAGATGGTATTTTTGTTaGGGATTGACTTGGTGGCTC | + |
Preference number: 2 (lower is better) Translates to: ARGKARRSVLTPEQQDPPRWYFC*GLTWWL Trigger: GAGCCACCAAGTCAATCCTCAACAAAAATACCATCT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGTTGGCAGGAAAGATTTaGCATTCACAATCTCCCCAT | + |
Preference number: 2 (lower is better) Translates to: RGKARRSVLTPEQQDPPGLAGKI*HSQSPH Trigger: ATGGGGAGATTGTGAATGTCAAATCTTTCCTGCCAA...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACAAGTAGCAACATGGTaGAAATGGCTGGCTTCCTTG | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGQVATW*KWLASL Trigger: CAAGGAAGCCAGCCATTTCCACCATGTTGCTACTTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | GACACTTGTGATCCCAGGACTGGGGAGACAGAGACAGGAGGAAACTaGGAGCTCACTGGCCAGTTGGCTGAGCAAAATTGGTGTGTCCTA | + |
Preference number: 2 (lower is better) Translates to: DTCDPRTGETETGGN*ELTGQLAEQNWCVL Trigger: TAGGACACACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGATCACAAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR GCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGTGTCTCCTGCATGCTaGATTCTGGCACCCGAGAAC | + |
Preference number: 2 (lower is better) Translates to: MGFQSAEGIQESVPVLLLVSPAC*ILAPEN Trigger: GTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACAC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTGCAGTCCAGGACTGTaGGCAGCCTGGTGTCCAGAT | + |
Preference number: 2 (lower is better) Translates to: HSFPIIKLISRKLGQLGWCSPGL*AAWCPD Trigger: ATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGGGCAATTGGAAGGCTaGCGCTGTGGGCTGGAGTTG | + |
Preference number: 2 (lower is better) Translates to: EITELSWIFKALGGGWCCGQLEG*RCGLEL Trigger: CAACTCCAGCCCACAGCGCCAGCCTTCCAATTGCCC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGACTTGCATATTAACATaGGCTTTCCAGAATTGGATG | + |
Preference number: 2 (lower is better) Translates to: GGWCCLLREALSGAGRKWTCILT*AFQNWM Trigger: CATCCAATTCTGGAAAGCCCATGTTAATATGCAAGT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTTGGCAGGAAGTGGGATaGGGGTGCGGAGTTGGGCAG | + |
Preference number: 2 (lower is better) Translates to: WLCRGHISILGRPVFLLLWQEVG*GCGVGQ Trigger: CTGCCCAACTCCGCACCCCCATCCCACTTCCTGCCA...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 90 bp | GCACTGTGTCAGGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTaGAGCAAACACCCATCACAACATCACAGGAGCACCATACATATG | + |
Preference number: 2 (lower is better) Translates to: ALCQVCAHPLSLLRP*SKHPSQHHRSTIHM Trigger: CATATGTATGGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCAAGCCTGCCCTTTCCTTaGCCCAGAACAGCTGGGGTC | + |
Preference number: 2 (lower is better) Translates to: WAFQNWMQGGLMREIQYPSLPFP*PRTAGV Trigger: GACCCCAGCTGTTCTGGGGCAAGGAAAGGGCAGGCT...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTCCCCCGACTTTCCTCTaGACTGTCCATGAAAACCAG | + |
Preference number: 2 (lower is better) Translates to: MGFQSAEGIQESVPVLLLPPTFL*TVHENQ Trigger: CTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGAGAAACTGGGCAATTaGAAGGCTGGCGCTGTGGGC | + |
Preference number: 2 (lower is better) Translates to: EITELSWIFKALGGGWCCEKLGN*KAGAVG Trigger: GCCCACAGCGCCAGCCTTCCAATTGCCCAGTTTCTC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 90 bp | ACAACATCACAGGAGCACCATACATATGGGGCTTCCTCCATCATCTaGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAG | + |
Preference number: 2 (lower is better) Translates to: TTSQEHHTYGASSII*GDAGWKKRRTVASQ Trigger: CTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTGTGATGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTACTTTGGGCAATATaGACAAGAAGAATGGGGATA | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGLLWAI*TRRMGI Trigger: TATCCCCATTCTTCTTGTTCATATTGCCCAAAGTAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGATGGTGCTGCCTGCTaGGGGAGGCTCTGTCAGGAG | + |
Preference number: 2 (lower is better) Translates to: FQTSPLAMQRTHFYSRKTDGAAC*GRLCQE Trigger: CTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGCTGCTAGCGAAGCCTaGCACCATCTGAAGGAGCTT | + |
Preference number: 2 (lower is better) Translates to: PTITVLALLSLDTCIGYIAASEA*HHLKEL Trigger: AAGCTCCTTCAGATGGTGGCAGGCTTCGCTAGCAGC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR GCA 90 bp | GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGAAAGACCCTTCTTCTCTaGCTCTATTTGCTATTAACT | + |
Preference number: 2 (lower is better) Translates to: ACSPGLWAAWCPDGRLRRKTLLL*LYLLLT Trigger: AGTTAATAGCAAATAGAGGCAGAGAAGAAGGGTCTT...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAAAAATTATACCCAAGTaGGACTGGGTGAAAACCCAA | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGKIIPK*DWVKTQ Trigger: TTGGGTTTTCACCCAGTCCCACTTGGGTATAATTTT...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGGACTGTGGGCAGCCTaGTGTCCAGATGGTAGGCTT | + |
Preference number: 2 (lower is better) Translates to: LTMKTQVISNSQAPMATRGLWAA*CPDGRL Trigger: AAGCCTACCATCTGGACACCAGGCTGCCCACAGTCC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGGAGCTGGCAGGAAGTaGGATGGGGGTGCGGAGTTG | + |
Preference number: 2 (lower is better) Translates to: FQTSPLAMQRTHFYSRKTGAGRK*DGGAEL Trigger: CAACTCCGCACCCCCATCCCACTTCCTGCCAGCTCC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTATTTTTGTTGAGGATTaGCTTGGTGGCTCTCTGGCC | + |
Preference number: 2 (lower is better) Translates to: MGFQSAEGIQESVPVLLLIFVED*LGGSLA Trigger: GGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAAT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAACAGCTGGGGTCACTaGGACATGGCTGCTTGGGTA | + |
Preference number: 2 (lower is better) Translates to: LTMKTQVISNSQAPMATRNSWGH*DMAAWV Trigger: TACCCAAGCAGCCATGTCTCAGTGACCCCAGCTGTT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTAACTCAAGGCTTTTaGCAGGAAAGATTTGACATT | + |
Preference number: 2 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGLTQGF*QERFDI Trigger: AATGTCAAATCTTTCCTGCCAAAAGCCTTGAGTTAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | TGCTGTGAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTaGGAATGGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCTATA | + |
Preference number: 2 (lower is better) Translates to: CCEIHSIAILKLSSD*EWGWRWGMSAWSSI Trigger: TATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGAGGAAGAGGGCCACCTaGGGACAAGGATGCCCCACT | + |
Preference number: 2 (lower is better) Translates to: MGVRKQAPSFKCDILIWMRKRAT*GQGCPT Trigger: AGTGGGGCATCCTTGTCCTCAGGTGGCCCTCTTCCT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAGGCTTCTGTGGGAATaGCAGCTAAAGCCAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: LTMKTQVISNSQAPMATRRLLWE*QLKPGH Trigger: ATGGCCTGGCTTTAGCTGTCATTCCCACAGAAGCCT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCCAGGGTCTTCACCCTaGTTGACCAGGGGGATGTTC | + |
Preference number: 2 (lower is better) Translates to: CIHSTVCILPTVCIWIKRPGSSP*LTRGMF Trigger: GAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR GCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGCCCGTTCTGCTGCTTaGAGGCAGACCTTGCAAAGA | + |
Preference number: 2 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRARSAA*RQTLQR Trigger: TCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGCTTTAACAGATGCATaGGTAAAACCTGCTAATGAG | + |
Preference number: 2 (lower is better) Translates to: MGFQSAEGIQESVPVLLLALTDA*VKPANE Trigger: CTCATTAGCAGGTTTTACTCATGCATCTGTTAAAGC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCATATCAGAAAGCATGGTaGCATGCAGGCAGACATGGT | + |
Preference number: 2 (lower is better) Translates to: WAFQNWMQGGLMREIQYPYQKAW*HAGRHG Trigger: ACCATGTCTGCCTGCATGTCACCATGCTTTCTGATA...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGATGGCTGTGTCTCCTaGATGCTGCATTCTGGCACC | + |
Preference number: 2 (lower is better) Translates to: MGVRKQAPSFKCDILIWMDGCVS*MLHSGT Trigger: GGTGCCAGAATGCAGCATGCAGGAGACACAGCCATC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATT | + |
Preference number: 2 (lower is better) Translates to: PTITVLALLSLDTCIGYIHLWGG*KSKPLI Trigger: AATGAGAGGCTTGGATTTCCACCCTCCCCATAAATG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGCTGTGGGCTGGAGTTaGAGTTCAGTTAACAGCATA | + |
Preference number: 2 (lower is better) Translates to: LTMKTQVISNSQAPMATRAVGWS*SSVNSI Trigger: TATGCTGTTAACTGAACTCCAACTCCAGCCCACAGC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATCAGAGTAGGAGAAACTaGGCAATTGGAAGGCTGGCG | + |
Preference number: 2 (lower is better) Translates to: TSTVRRTLLILNLFCRLHQSRRN*AIGRLA Trigger: CGCCAGCCTTCCAATTGCCCAGTTTCTCCTACTCTG...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATACAAAGGGTCCCCAGTaGCAAGCCAGACACACTAGT | + |
Preference number: 2 (lower is better) Translates to: TSTVRRTLLILNLFCRLHTKGPQ*QARHTS Trigger: ACTAGTGTGTCTGGCTTGCCACTGGGGACCCTTTGT...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGTCTGTCCTCTGCATTTaGTGGCTGTGTCTCCTGCAT | + |
Preference number: 2 (lower is better) Translates to: CIHSTVCILPTVCIWIKRSVLCI*WLCLLH Trigger: ATGCAGGAGACACAGCCATCAAATGCAGAGGACAGA...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR GCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGCTCAGAGAAGGATCTaGCGAGAAAAGGTTAGTGCG | + |
Preference number: 2 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRAQRRI*REKVSA Trigger: CGCACTAACCTTTTCTCGGCAGATCCTTCTCTGAGC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGGTTGCTTTTCCTTGTaGATGTGGCCAGGGTCTTCA | + |
Preference number: 2 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRGCFSL*MWPGSS Trigger: TGAAGACCCTGGCCACATCCACAAGGAAAAGCAACC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGGTGTTCAGGCTTGTGTaGCAGGTGCCTTTATCTGCT | + |
Preference number: 2 (lower is better) Translates to: QFGDFVHHCHIRKHGDMQVFRLV*QVPLSA Trigger: AGCAGATAAAGGCACCTGCCACACAAGCCTGAACAC...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTCCACAGCACACATATaGAAATTAGAGGACAACGTT | + |
Preference number: 2 (lower is better) Translates to: HSFPIIKLISRKLGQLGWSTAHI*KLEDNV Trigger: AACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGCTGGACATATTCTaGTATGTTGAATGGAGATTC | + |
Preference number: 2 (lower is better) Translates to: PTITVLALLSLDTCIGYIWLDIF*YVEWRF Trigger: GAATCTCCATTCAACATATCAGAATATGTCCAGCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR TCA 90 bp | TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGACTTGGCTGTAGCCTaGAGAGTTATGTCTCTTGTG | + |
Preference number: 2 (lower is better) Translates to: FQTSPLAMQRTHFYSRKTDLAVA*RVMSLV Trigger: CACAAGAGACATAACTCTTCAGGCTACAGCCAAGTC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTGTTAAGGTCACAGCATaGACACATTTTCTGAAGTGG | + |
Preference number: 2 (lower is better) Translates to: WLCRGHISILGRPVFLLLVKVTA*THFLKW Trigger: CCACTTCAGAAAATGTGTGCATGCTGTGACCTTAAC...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR TCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAACTAGTGGACACAATTaGAATCATCTTACACAAGCA | + |
Preference number: 2 (lower is better) Translates to: TEEPVTLETYQDTWSCAKTSGHN*NHLTQA Trigger: TGCTTGTGTAAGATGATTTCAATTGTGTCCACTAGT...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATATTTTCCTTGTGGATGTaGCCAGGGTCTTCACCCTGC | + |
Preference number: 2 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIFSLWM*PGSSPC Trigger: GCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAA...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 90 bp | CACTCCACAGCACACATATGGAAATTAGAGGACAACGTTACGGAGTaGTGTCTTAGTGTTTCTATTGCTATGAAGAAACACCATGACCAC | + |
Preference number: 2 (lower is better) Translates to: HSTAHIWKLEDNVTE*CLSVSIAMKKHHDH Trigger: GTGGTCATGGTGTTTCTTCATAGCAATAGAAACACTAAGACACAACTCCGTAACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR GCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGTAGCCATCATCACCTaGTACCCTTGTGGTGTCAAC | + |
Preference number: 2 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIVAIIT*YPCGVN Trigger: GTTGACACCACAAGGGTAGCAGGTGATGATGGCTAC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR TCA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGACATCCTCTTACTCTTaGCTGTTGGTTCTTAGACTC | + |
Preference number: 2 (lower is better) Translates to: MGVRKQAPSFKCDILIWMTSSYS*LLVLRL Trigger: GAGTCTAAGAACCAACAGTCAAGAGTAAGAGGATGT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTACTCAACGGAAATCATaGCTCACAAATAAAGTAGCC | + |
Preference number: 2 (lower is better) Translates to: KPANELTAEINILLLLTVTQRKS*LTNKVA Trigger: GGCTACTTTATTTGTGAGCCATGATTTCCGTTGAGT...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CCA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTAGACTTCAAATCAAATaGAGGAGAAACATAAGCTCA | + |
Preference number: 2 (lower is better) Translates to: WLCRGHISILGRPVFLLLRLQIK*RRNISS Trigger: TGAGCTTATGTTTCTCCTCCATTTGATTTGAAGTCT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CCA 90 bp | GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACACACATTTTCTGAAGTaGGGTATTCTAAGGCGGAAG | + |
Preference number: 2 (lower is better) Translates to: EPDKLGLKVLRNLRTLTDTHFLK*GILRRK Trigger: CTTCCGCCTTAGAATACCCCACTTCAGAAAATGTGT...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR GCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGCACTGTGTGCATCTTaGCCACAGTATGTATTTGGA | + |
Preference number: 2 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIALCAS*PQYVFG Trigger: TCCAAATACATACTGTGGGCAAGATGCACACAGTGC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR GCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGTAGCTTCAGTAGATTaGCCTCTGATAAAACACATT | + |
Preference number: 2 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRVASVD*PLIKHI Trigger: AATGTGTTTTATCAGAGGGCAATCTACTGAAGCTAC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR GCA 90 bp | GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACCAGTTAACAGCATACTaGCCTAACTTACACAAAGTC | + |
Preference number: 2 (lower is better) Translates to: EPDKLGLKVLRNLRTLTDQLTAY*PNLHKV Trigger: GACTTTGTGTAAGTTAGGGCAGTATGCTGTTAACTG...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CCA 90 bp | TCAAATCAAATGGAGGAGAAACATAAGCTCATTCTGAAGATGTTCTCACACTGTCATTGTCAAGAAGAGTaGGTCATTTCACTTGCCCTC | + |
Preference number: 2 (lower is better) Translates to: SNQMEEKHKLILKMFSHCHCQEE*VISLAL Trigger: GAGGGCAAGTGAAATGACCCACTCTTCTTGACAATG...ACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CAA 90 bp | AAGGCAGTAAGCAAGACCAGCACTGTTAGGAGGACACTCTTGATCTaGAATTTATTTTGCCGGCTTCATTATTTCTTTGTAACAAATGGT | + |
Preference number: 2 (lower is better) Translates to: KAVSKTSTVRRTLLI*NLFCRLHYFFVTNG Trigger: ACCATTTGTTACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCTTACTGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR GCA 90 bp | GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACCCTTATGGTAGAACTTaGATATTAACATGGGCTTTC | + |
Preference number: 2 (lower is better) Translates to: EPDKLGLKVLRNLRTLTDPYGRT*ILTWAF Trigger: GAAAGCCCATGTTAATATGCAAGTTCTACCATAAGG...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR GCA 90 bp | CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATT | + |
Preference number: 2 (lower is better) Translates to: QAYIPHTTNQLENFLRNTQVLWL*RGHISI Trigger: AATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTG...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CCA 90 bp | CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACATTTATGTATAGGCTTTaGAGCCAGACAAACTTGGGC | + |
Preference number: 2 (lower is better) Translates to: QAYIPHTTNQLENFLRNTFMYRL*SQTNLG Trigger: GCCCAAGTTTGTCTGGCTCCAAAGCCTATACATAAA...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 90 bp | GAAATTGACTCAATATCTGATTGGGAAACATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATA | + |
Preference number: 2 (lower is better) Translates to: EIDSISDWETSYNVG*TRLQLVWGWCKIYI Trigger: TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGAGTCAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | AGGACCCACCTGGGCCGGCTGTCACAGCTGCTCAGGTaGCAACCCAGATTCCCTGGGCCCCACCATTACTGT | + |
Preference number: 3 (lower is better) Translates to: RTHLGRLSQLLR*QPRFPGPHHYC Trigger: ACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | GAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTaGGCCGGCTGTCACAGCTGCTCAGGTGCCAACCCA | + |
Preference number: 3 (lower is better) Translates to: EVSPDTRTAGPT*AGCHSCSGANP Trigger: TGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | GCTGTCACAGCTGCTCAGGTGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCC | + |
Preference number: 3 (lower is better) Translates to: AVTAAQVPTQIP*APPLLSLPFCP Trigger: GGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | CTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTaGTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGC | + |
Preference number: 3 (lower is better) Translates to: LSWIFKALGGGW*CLLREALSGAG Trigger: GCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CAA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTTTGTTGAGGATTGACTaGGTGGCTCTCTGGCCGACT | + |
Preference number: 3 (lower is better) Translates to: ARGKARRSVLTPEQQDPPLLRID*VALWPT Trigger: AGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAA...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | GGCACCCGAGAACATGGTTGCTTTTCCTTGTGGATGTaGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATG | + |
Preference number: 3 (lower is better) Translates to: GTREHGCFSLWM*PGSSPCLTRGM Trigger: CATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR TCA 72 bp | TTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTaGCCAGGGGGATGTTCCAGAGGGACACAAGGTGAG | + |
Preference number: 3 (lower is better) Translates to: FPCGCGQGLHPA*PGGCSRGTQGE Trigger: CTCACCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR TCA 72 bp | CGCCACCCCTACCTTAGAGCTCCTCCTTCAGGGCACTaGAGAACCCGTGACCCTGGAGACTTACCAAGATAC | + |
Preference number: 3 (lower is better) Translates to: RHPYLRAPPSGH*RTRDPGDLPRY Trigger: GTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAGCTCTAAGGTAGGGGTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | TGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTaGTTGACCAGGGGGATGTTCCAGAGGGACACAAGG | + |
Preference number: 3 (lower is better) Translates to: CFSLWMWPGSSP*LTRGMFQRDTR Trigger: CCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | AAAGCAGTGAGGGGCAGGTGGAGTAGAGCTGGCTGCTaGGAGACCCACTCTCTGCGTGAGAACTTGGTAAAC | + |
Preference number: 3 (lower is better) Translates to: KAVRGRWSRAGC*ETHSLRENLVN Trigger: GTTTACCAAGTTCTCACGCAGAGAGTGGGTCTCCCAGCAGCCAGCTCTACTCCACCTGCCCCTCACTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CAA 90 bp | GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGCTGGGCCAGCTGGGTaGGACAGACTCCCTGCAGCA | + |
Preference number: 3 (lower is better) Translates to: EITELSWIFKALGGGWCCAGPAG*DRLPAA Trigger: TGCTGCAGGGAGTCTGTCCAACCCAGCTGGCCCAGC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 72 bp | GTTCCACACATGGACGCTGGTCCTGGTAGACACTTGTaGTCCCAGGACTGGGGAGACAGAGACAGGAGGAAA | + |
Preference number: 3 (lower is better) Translates to: VPHMDAGPGRHL*SQDWGDRDRRK Trigger: TTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGATCACAAGTGTCTACCAGGACCAGCGTCCATGTGTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CAA 90 bp | TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAACAAGGATGCCCCACTaGGCCTGCACTCACCAAGAA | + |
Preference number: 3 (lower is better) Translates to: SSAFDGCVSCMLHSGTRETRMPH*ACTHQE Trigger: TTCTTGGTGAGTGCAGGCCAAGTGGGGCATCCTTGT...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR TCA 72 bp | GCCGCAGATGAGAGAGGAGAATCTGTCCTCTGCATTTaGTGGCTGTGTCTCCTGCATGCTGCATTCTGGCAC | + |
Preference number: 3 (lower is better) Translates to: AADERGESVLCI*WLCLLHAAFWH Trigger: GTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGATTCTCCTCTCTCATCTGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | TGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATaGTTGCTTTTCCTTGTGGATGTGGCCAGGGTCTTC | + |
Preference number: 3 (lower is better) Translates to: CLLHAAFWHPRT*LLFLVDVARVF Trigger: GAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | ATCCCAGGACTGGGGAGACAGAGACAGGAGGAAACTTaGAGCTCACTGGCCAGTTGGCTGAGCAAAATTGGT | + |
Preference number: 3 (lower is better) Translates to: IPGLGRQRQEET*SSLASWLSKIG Trigger: ACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CAA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACAAACCACCCAACCATaGGTGACTAGAATCTGGAAT | + |
Preference number: 3 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGQTTQP*VTRIWN Trigger: ATTCCAGATTCTAGTCACCAATGGTTGGGTGGTTTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CAA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTCAGCCTGCCCTTTCCTaGCCCCAGAACAGCTGGGGT | + |
Preference number: 3 (lower is better) Translates to: WLCRGHISILGRPVFLLLQPALS*PQNSWG Trigger: ACCCCAGCTGTTCTGGGGCAAGGAAAGGGCAGGCTG...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 72 bp | TACAAAGATCCCTCAGGGCATCATGAAGGAATAGGGTaGCTTCAGCTGCATGCAGTCCAGGACTGTGGGCAG | + |
Preference number: 3 (lower is better) Translates to: YKDPSGHHEGIG*LQLHAVQDCGQ Trigger: CTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 72 bp | GAGAATCTGTCCTCTGCATTTGATGGCTGTGTCTCCTaGATGCTGCATTCTGGCACCCGAGAACATGGTTGC | + |
Preference number: 3 (lower is better) Translates to: ENLSSAFDGCVS*MLHSGTREHGC Trigger: GCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | AGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTaGTGCTTGCAGGCAGACCTTGCAAAGAAAGCACAG | + |
Preference number: 3 (lower is better) Translates to: RVQKASKKVCPF*CLQADLAKKAQ Trigger: CTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTaGCCTTCTGTCCCTGGATACATGCATTGGATACAT | + |
Preference number: 3 (lower is better) Translates to: QPRFPGPHHYCP*PSVPGYMHWIH Trigger: ATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR GCA 72 bp | CAGACTCCCTGCAGCAGGCTGGTTAAGGTCACAGCATaGACACATTTTCTGAAGTGGGGTATTCTAAGGCGG | + |
Preference number: 3 (lower is better) Translates to: QTPCSRLVKVTA*THFLKWGILRR Trigger: CCGCCTTAGAATACCCCACTTCAGAAAATGTGTGCATGCTGTGACCTTAACCAGCCTGCTGCAGGGAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 72 bp | TACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTaGATACATACATCGCCTCTGAGCCCATGGGGGTTC | + |
Preference number: 3 (lower is better) Translates to: YCPCPSVPGYMH*IHTSPLSPWGF Trigger: GAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CCA 72 bp | AGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATaGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCT | + |
Preference number: 3 (lower is better) Translates to: SIAILKLSSDLE*GWRWGMSAWSS Trigger: AGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CAA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTT | + |
Preference number: 3 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGSYNVG*TRLQLV Trigger: AACCAGCTGTAATCTGGTCAAACCCACATTGTAAGA...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CAA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTCACCCGAGAACATGGTaGCTTTTCCTTGTGGATGTG | + |
Preference number: 3 (lower is better) Translates to: MGFQSAEGIQESVPVLLLHPRTW*LFLVDV Trigger: CACATCCACAAGGAAAAGCAACCATGTTCTCGGGTG...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR-3UTR CAA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCCTTACTTGTAGGTTaGTATCTTAGTCATGGGAAT | + |
Preference number: 3 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGPLLVG*YLSHGN Trigger: ATTCCCATGACTAAGATACAAACCTACAAGTAAGGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | AAAAGAAGGACAGTGGCCTCTCAGTGTCCTGCACTGTaGAATAGCCACACCCTAAACACAGCCTGCCCTTTC | + |
Preference number: 3 (lower is better) Translates to: KRRTVASQCPAL*NSHTLNTACPF Trigger: GAAAGGGCAGGCTGTGTTTAGGGTGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR TCA 72 bp | GGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTTaGAACTCTCATCAGATTTGGAATGGGGGTGGCGCT | + |
Preference number: 3 (lower is better) Translates to: GAHAVKFTALPS*NSHQIWNGGGA Trigger: AGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR GCA 72 bp | GCAAATGGGGCTGGAACAGTGGACCAGTGGGTAAAGTaGCTGCTTCAGGGACATGTGGACTTTGAACTTGAT | + |
Preference number: 3 (lower is better) Translates to: ANGAGTVDQWVK*LLQGHVDFELD Trigger: ATCAAGTTCAAAGTCCACATGTCCCTGAAGCAGGCACTTTACCCACTGGTCCACTGTTCCAGCCCCATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CCA 72 bp | TCTTGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTaGCCTCTCAGTGTCCTGCACTGTGAAATAGCCACA | + |
Preference number: 3 (lower is better) Translates to: SWEMQGGRKEGQ*PLSVLHCEIAT Trigger: TGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CCA 72 bp | AGGAGCACCATACATATGGGGCTTCCTCCATCATCTTaGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGG | + |
Preference number: 3 (lower is better) Translates to: RSTIHMGLPPSS*EMQGGRKEGQW Trigger: CCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR-3UTR CAA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCT | + |
Preference number: 3 (lower is better) Translates to: TEEPVTLETYQDTWSCAKHGCFS*WMWPGS Trigger: AGACCCTGGCCACATCCACAAGGAAAAGCAACCATG...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CAA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAGCACTGTGTGCATCTaGCCCACAGTATGTATTTGG | + |
Preference number: 3 (lower is better) Translates to: MGFQSAEGIQESVPVLLLSTVCI*PTVCIW Trigger: CCAAATACATACTGTGGGCAAGATGCACACAGTGCT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | GGTAGTCTTCTTGTACCAGAGAGGCTTCTGTGGGAATaGCAGCTAAAGCCAGGCCATCGTATCTCCATAGCA | + |
Preference number: 3 (lower is better) Translates to: GSLLVPERLLWE*QLKPGHRISIA Trigger: TGCTATGGAGATACGATGGCCTGGCTTTAGCTGTCATTCCCACAGAAGCCTCTCTGGTACAAGAAGACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | TCACACTGTGGTCTACAAAGATCCCTCAGGGCATCATaGAGGAATAGGGTGACTTCAGCTGCATGCAGTCCA | + |
Preference number: 3 (lower is better) Translates to: SHCGLQRSLRAS*RNRVTSAACSP Trigger: TGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTAGACCACAGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR GCA 72 bp | ATCTGTCCTCTGCATTTGATGGCTGTGTCTCCTGCATaGTGCATTCTGGCACCCGAGAACATGGTTGCTTTT | + |
Preference number: 3 (lower is better) Translates to: ICPLHLMAVSPA*CILAPENMVAF Trigger: AAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR GCA 72 bp | ATGTGTAGGAAGATTTTAGGGTGGCTTTGGAACCAGTaGCCAGTAGACCGTCTGCATTGGCTCAGAGAAGGA | + |
Preference number: 3 (lower is better) Translates to: MCRKILGWLWNQ*PVDRLHWLREG Trigger: TCCTTCTCTGAGCCAATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | GGTTTGCATATGTGTAGGAAGATTTTAGGGTGGCTTTaGAACCAGTGCCCAGTAGACCGTCTGCATTGGCTC | + |
Preference number: 3 (lower is better) Translates to: GLHMCRKILGWL*NQCPVDRLHWL Trigger: GAGCCAATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACATATGCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | CAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATaGGGCCCATGCTGTGAAATTCACAGCATTGCCATC | + |
Preference number: 3 (lower is better) Translates to: QVHRWEVAYSMS*GPCCEIHSIAI Trigger: GATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | CATCTTACACAAGCAAACAAACCACCCAACCATTGGTaGCTAGAATCTGGAATGCGGCCGTGGGGAGTTGAA | + |
Preference number: 3 (lower is better) Translates to: HLTQANKPPNHW*LESGMRPWGVE Trigger: TTCAACTCCCCACGGCCGCATTCCAGATTCTAGTCACCAATGGTTGGGTGGTTTGTTTGCTTGTGTAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | CAATATGGAGGGGGCAATCATGACTTGGCTGTAGCCTaGAGAGTTATGTCTCTTGTGAGGCATGGCAGAGTA | + |
Preference number: 3 (lower is better) Translates to: QYGGGNHDLAVA*RVMSLVRHGRV Trigger: TACTCTGCCATGCCTCACAAGAGACATAACTCTTCAGGCTACAGCCAAGTCATGATTGCCCCCTCCATATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | CCAGACACACTAGTGCCAATATGGAGGGGGCAATCATaGCTTGGCTGTAGCCTGAAGAGTTATGTCTCTTGT | + |
Preference number: 3 (lower is better) Translates to: PDTLVPIWRGQS*LGCSLKSYVSC Trigger: ACAAGAGACATAACTCTTCAGGCTACAGCCAAGTCATGATTGCCCCCTCCATATTGGCACTAGTGTGTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | GGTGTTCAGGCTTGTGTGGCAGGTGCCTTTATCTGCTaGGCCATCTGCCTGGCTCATAATCTTAATTTTGCA | + |
Preference number: 3 (lower is better) Translates to: GVQACVAGAFIC*AICLAHNLNFA Trigger: TGCAAAATTAAGATTATGAGCCAGGCAGATGGCTCAGCAGATAAAGGCACCTGCCACACAAGCCTGAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR GCA 72 bp | CTAAATCACAGTTTCTGTCTCAGGAGACCTGAGGTCTaGCTTTCCAACAACAAGCCTACAGCAGGGTTTAGC | + |
Preference number: 3 (lower is better) Translates to: LNHSFCLRRPEV*LSNNKPTAGFS Trigger: GCTAAACCCTGCTGTAGGCTTGTTGTTGGAAAGGCAGACCTCAGGTCTCCTGAGACAGAAACTGTGATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CAA 90 bp | TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCACCCCCTCAGTCTGTaGAGGCCTTTGAGCAAACAC | + |
Preference number: 3 (lower is better) Translates to: FQTSPLAMQRTHFYSRKTHPLSL*RPLSKH Trigger: GTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTG...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CAA 90 bp | CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTGTCAGGTAAACACATaGTCAAGAAGAGTGGGTCAT | + |
Preference number: 3 (lower is better) Translates to: HSFPIIKLISRKLGQLGWCQVNT*SRRVGH Trigger: ATGACCCACTCTTCTTGACAATGTGTTTACCTGACA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | TTGAGACCGTGCTTCAAAAACCAAAGTGTTGACTCCTaGGGAATGAGCCCAAGATTGCCTTCTGGTTTCCAC | + |
Preference number: 3 (lower is better) Translates to: LRPCFKNQSVDS*GMSPRLPSGFH Trigger: GTGGAAACCAGAAGGCAATCTTGGGCTCATTCCTCAGGAGTCAACACTTTGGTTTTTGAAGCACGGTCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR GCA 72 bp | AGGTGGGAAGTCGCTTATTCAATGTCATGGGGCCCATaGTGTGAAATTCACAGCATTGCCATCTTGAAACTC | + |
Preference number: 3 (lower is better) Translates to: RWEVAYSMSWGP*CEIHSIAILKL Trigger: GAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CCA 72 bp | GAAGCCTGCCACCATCTGAAGGAGCTTAGATTGTCATaGTTTGAGGATAAGTTGACAAGACCACTAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: EACHHLKELRLS*FEDKLTRPLGG Trigger: TCCTCCTAGTGGTCTTGTCAACTTATCCTCAAACCATGACAATCTAAGCTCCTTCAGATGGTGGCAGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CAA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAAGCCTCTCATTTCTTaGTTTTGTACTCCTTTGAAG | + |
Preference number: 3 (lower is better) Translates to: MGFQSAEGIQESVPVLLLKPLIS*FCTPLK Trigger: CTTCAAAGGAGTACAAAACAAAGAAATGAGAGGCTT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CAA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGAGCACAGCGGTAATTaGACAGAGAGAATGTTTATG | + |
Preference number: 3 (lower is better) Translates to: PTITVLALLSLDTCIGYIEHSGN*TERMFM Trigger: CATAAACATTCTCTCTGTCAAATTACCGCTGTGCTC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CAA 90 bp | ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATAGTGGGTCATTTCACTaGCCCTCCTCAGTAGATGCT | + |
Preference number: 3 (lower is better) Translates to: TSTVRRTLLILNLFCRLHSGSFH*PSSVDA Trigger: AGCATCTACTGAGGAGGGCAAGTGAAATGACCCACT...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | GGAAGTCGCTTATTCAATGTCATGGGGCCCATGCTGTaGAATTCACAGCATTGCCATCTTGAAACTCTCATC | + |
Preference number: 3 (lower is better) Translates to: GSRLFNVMGPML*NSQHCHLETLI Trigger: GATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | GTAGCCAAGAGACTAGTCAAGTGGGATTACCACAAATaGACAAAGTTGCACAGCGAGGGAAGCAATCAATGG | + |
Preference number: 3 (lower is better) Translates to: VAKRLVKWDYHK*TKLHSEGSNQW Trigger: CCATTGATTGCTTCCCTCGCTGTGCAACTTTGTTCATTTGTGGTAATCCCACTTGACTAGTCTCTTGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR GCA 72 bp | GGAGGCCAGGTTTTAGTCTCAGTAGCTTCAGTAGATTaGCCTCTGATAAAACACATTGGCATGGTGATAGGA | + |
Preference number: 3 (lower is better) Translates to: GGQVLVSVASVD*PLIKHIGMVIG Trigger: TCCTATCACCATGCCAATGTGTTTTATCAGAGGGCAATCTACTGAAGCTACTGAGACTAAAACCTGGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | CTAAAAGGTTTGCATATGTGTAGGAAGATTTTAGGGTaGCTTTGGAACCAGTGCCCAGTAGACCGTCTGCAT | + |
Preference number: 3 (lower is better) Translates to: LKGLHMCRKILG*LWNQCPVDRLH Trigger: ATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACATATGCAAACCTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | GTGTGGCAGGTGCCTTTATCTGCTGAGCCATCTGCCTaGCTCATAATCTTAATTTTGCATGATTCCTGCATA | + |
Preference number: 3 (lower is better) Translates to: VWQVPLSAEPSA*LIILILHDSCI Trigger: TATGCAGGAATCATGCAAAATTAAGATTATGAGCCAGGCAGATGGCTCAGCAGATAAAGGCACCTGCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CAA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATGGTGATAGGAAATaGACTCAATATCTGATTGGG | + |
Preference number: 3 (lower is better) Translates to: PTITVLALLSLDTCIGYIHGDRK*TQYLIG Trigger: CCCAATCAGATATTGAGTCAATTTCCTATCACCATG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR GCA 72 bp | CTGTGGGCTGGAGTTGGAGTTCAGTTAACAGCATACTaGCCTAACTTACACAAAGTCTATGGTTTGATTCTG | + |
Preference number: 3 (lower is better) Translates to: LWAGVGVQLTAY*PNLHKVYGLIL Trigger: CAGAATCAAACCATAGACTTTGTGTAAGTTAGGGCAGTATGCTGTTAACTGAACTCCAACTCCAGCCCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CCA 72 bp | GCGCCATCTTTTCCTGCAAATGAACTAGGTAGCAACTaGAAAAAGACCCAACTCTCCCACCACTTAATAATC | + |
Preference number: 3 (lower is better) Translates to: APSFPANELGSN*KKTQLSHHLII Trigger: GATTATTAAGTGGTGGGAGAGTTGGGTCTTTTTCCAGTTGCTACCTAGTTCATTTGCAGGAAAAGATGGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | GGGACAGATCCTTTAGCAGAGCATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACT | + |
Preference number: 3 (lower is better) Translates to: GTDPLAEHLWGG*KSKPLISLFCT Trigger: AGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | CTTTTAAGTAGGGAAGATGGTATTTTTGTTGAGGATTaGCTTGGTGGCTCTCTGGCCGACTTATCAGGTAGT | + |
Preference number: 3 (lower is better) Translates to: LLSREDGIFVED*LGGSLADLSGS Trigger: ACTACCTGATAAGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAATACCATCTTCCCTACTTAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | TTGCAAAAGGATGTGGTGGTAGCTTTAACAGATGCATaGGTAAAACCTGCTAATGAGCTCACAGCTGAGATC | + |
Preference number: 3 (lower is better) Translates to: LQKDVVVALTDA*VKPANELTAEI Trigger: GATCTCAGCTGTGAGCTCATTAGCAGGTTTTACTCATGCATCTGTTAAAGCTACCACCACATCCTTTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | CAACCACCTAACTCAAGGCTTTTGGCAGGAAAGATTTaGCATTCACAATCTCCCCATTACAAACGGAGCAAT | + |
Preference number: 3 (lower is better) Translates to: QPPNSRLLAGKI*HSQSPHYKRSN Trigger: ATTGCTCCGTTTGTAATGGGGAGATTGTGAATGTCAAATCTTTCCTGCCAAAAGCCTTGAGTTAGGTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR GCA 72 bp | AAATCATGGCTCACAAATAAAGTAGCCATCATCACCTaGTACCCTTGTGGTGTCAACAAAGCAGTATCAGGA | + |
Preference number: 3 (lower is better) Translates to: KSWLTNKVAIIT*YPCGVNKAVSG Trigger: TCCTGATACTGCTTTGTTGACACCACAAGGGTAGCAGGTGATGATGGCTACTTTATTTGTGAGCCATGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | CTTATGGCACCAACAATCAGAACTCAACGGAAATCATaGCTCACAAATAAAGTAGCCATCATCACCTGCTAC | + |
Preference number: 3 (lower is better) Translates to: LMAPTIRTQRKS*LTNKVAIITCY Trigger: GTAGCAGGTGATGATGGCTACTTTATTTGTGAGCCATGATTTCCGTTGAGTTCTGATTGTTGGTGCCATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR CCA 72 bp | ATGGTATTTTTGTTGAGGATTGACTTGGTGGCTCTCTaGCCGACTTATCAGGTAGTTCTCAGAGCTAAAATG | + |
Preference number: 3 (lower is better) Translates to: MVFLLRIDLVAL*PTYQVVLRAKM Trigger: CATTTTAGCTCTGAGAACTACCTGATAAGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAATACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR-3UTR CAA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTAGATTTTGTCCATCATaGTCATATCAGAAAGCATGG | + |
Preference number: 3 (lower is better) Translates to: WLCRGHISILGRPVFLLLRFCPS*SYQKAW Trigger: CCATGCTTTCTGATATGACAATGATGGACAAAATCT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | CTTGAAGATTATCCTCTACCCTCAAGAACCAAAGTATaGAACCCTAAATCACAGTTTCTGTCTCAGGAGACC | + |
Preference number: 3 (lower is better) Translates to: LEDYPLPSRTKV*NPKSQFLSQET Trigger: GGTCTCCTGAGACAGAAACTGTGATTTAGGGTTTCATACTTTGGTTCTTGAGGGTAGAGGATAATCTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR GCA 72 bp | GAATTTGTTGAAGTTTTCAAACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATTCTAGGAAGACCCGTC | + |
Preference number: 3 (lower is better) Translates to: EFVEVFKQVLWL*RGHISILGRPV Trigger: GACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CCA 72 bp | ATACCTTCTCCTTATGGTAGAACTTGCATATTAACATaGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATG | + |
Preference number: 3 (lower is better) Translates to: IPSPYGRTCILT*AFQNWMQGGLM Trigger: CATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCATGTTAATATGCAAGTTCTACCATAAGGAGAAGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CAA 90 bp | CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACACTTCTCTGCCTCTATTaGCTATTAACTAGCTCAGGC | + |
Preference number: 3 (lower is better) Translates to: QAYIPHTTNQLENFLRNTLLCLY*LLTSSG Trigger: GCCTGAGCTAGTTAATAGCAAATAGAGGCAGAGAAG...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | CAATATCTGATTGGGAAACATCTTACAATGTGGGTTTaGCCAGATTACAGCTGGTTTGGGGTTGGTGTAAAA | + |
Preference number: 3 (lower is better) Translates to: QYLIGKHLTMWV*PDYSWFGVGVK Trigger: TTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | AGAGAATGTTTATGTATTGATACAATAGACGGGTTGTaGTGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAA | + |
Preference number: 3 (lower is better) Translates to: RECLCIDTIDGL*WVSRVQKASKK Trigger: TTTCTTGGATGCCTTCTGCACTCTGGAAACCCATCACAACCCGTCTATTGTATCAATACATAAACATTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | CACAGCGGTAATTTGACAGAGAGAATGTTTATGTATTaGTACAATAGACGGGTTGTGATGGGTTTCCAGAGT | + |
Preference number: 3 (lower is better) Translates to: HSGNLTERMFMY*YNRRVVMGFQS Trigger: ACTCTGGAAACCCATCACAACCCGTCTATTGTATCAATACATAAACATTCTCTCTGTCAAATTACCGCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | TACTTTGGGCAATATGAACAAGAAGAATGGGGATATTaGAATCGACCTTGCCAAGTAGCAACATGGTGGAAA | + |
Preference number: 3 (lower is better) Translates to: YFGQYEQEEWGY*NRPCQVATWWK Trigger: TTTCCACCATGTTGCTACTTGGCAAGGTCGATTTCAATATCCCCATTCTTCTTGTTCATATTGCCCAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR GCA 72 bp | TGGAGATTCTTAAAGTACTGTATTCATAGCACTGTGTaGATCTTGCCCACAGTATGTATTTGGATAAAGCGG | + |
Preference number: 3 (lower is better) Translates to: WRFLKYCIHSTV*ILPTVCIWIKR Trigger: CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACAGTACTTTAAGAATCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
3UTR TCA 72 bp | GTCAGTGAATTTATCAGACACATCGAGACACTGTTGTaGAACACCACATGCCAACACATAAAATGTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: VSEFIRHIETLL*NTTCQHIKCLF Trigger: AAAGAGACATTTTATGTGTTGGCATGTGGTGTTTCACAACAGTGTCTCGATGTGTCTGATAAATTCACTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR CCA 72 bp | GTAACAAATGGTTTTCAGTATCCCATTCCTCAGAGCTaGACAATCACAATTTCATGCTTAAGAGCTAGAAAG | + |
Preference number: 3 (lower is better) Translates to: VTNGFQYPIPQS*TITISCLRARK Trigger: CTTTCTAGCTCTTAAGCATGAAATTGTGATTGTCCAGCTCTGAGGAATGGGATACTGAAAACCATTTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR-3UTR CAA 90 bp | CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACATCCAGAAGTGACAATTaGCTTAGACAGCTTGAAGAT | + |
Preference number: 3 (lower is better) Translates to: QAYIPHTTNQLENFLRNTSRSDN*LRQLED Trigger: ATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGA...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
3UTR TCA 72 bp | TGTTCATCTGACAAAGAGCAATACTATTTAAGGAACTaGGGAATTCTGAACAGTAAATCCCTCAAGGCATGT | + |
Preference number: 3 (lower is better) Translates to: CSSDKEQYYLRN*GILNSKSLKAC Trigger: ACATGCCTTGAGGGATTTACTGTTCAGAATTCCTCAGTTCCTTAAATAGTATTGCTCTTTGTCAGATGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
CDS-3UTR GCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGATCCCTCACGCCGTGTaGCCTGGGCGCGCAAGATGC | + |
Preference number: 4 (lower is better) Translates to: GGWCCLLREALSGAGRKWIPHAV*PGRARC Trigger: GCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGAT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
||
CDS-3UTR GCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCTGGGCGCGCAAGATaGGGCTGCAGTAGCCCTCCG | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGPGRAR*GCSSPP Trigger: CGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
CDS-3UTR GCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGCTGCTCACTCCTCCTaGTCTCTCGGGCCTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGAAHSS*SLGPPS Trigger: GGAGGGAGGCCCGAGAGAGCAGGAGGAGTGAGCAGC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
CDS-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTG | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGGQHAH*AVFREL Trigger: CAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
CDS-3UTR GCA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: ARGKARRSVLTPEQQDPPPSSAT*LTPSLA Trigger: TGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGG...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTCTCCCGGGACCTCATaGCCATGCCGCACGAGACGC | + |
Preference number: 4 (lower is better) Translates to: LLLQGTEEPVTLETYQDTSPGTS*PCRTRR Trigger: GCGTCTCGTGCGGCATGGGCATGAGGTCCCGGGAGA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGA | + |
Preference number: 4 (lower is better) Translates to: GGWCCLLREALSGAGRKWAIQNT*IRVLLR Trigger: TCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACA | + |
Preference number: 4 (lower is better) Translates to: RGKARRSVLTPEQQDPPGCQAGH*ALALMT Trigger: TGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCA...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: PPTFLWTVHENQGPGPEILPRGG*TPCIPH Trigger: GTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACC | + |
Preference number: 4 (lower is better) Translates to: ACSPGLWAAWCPDGRLRRVQQLA*PLRWHT Trigger: GGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAAC...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTCAGGGAATCAGGTCCTaGACTACTTTCTGGACCCAG | + |
Preference number: 4 (lower is better) Translates to: ARGKARRSVLTPEQQDPPQGIRS*TTFWTQ Trigger: CTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTG...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGGCTGCCGCATCCTCTTaGCCTTTTCACAAGTGGAAG | + |
Preference number: 4 (lower is better) Translates to: RGKARRSVLTPEQQDPPGAAASS*PFHKWK Trigger: CTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGC...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAG | + |
Preference number: 4 (lower is better) Translates to: RGKARRSVLTPEQQDPPGRKDIK*RVLSTE Trigger: CTCAGTGGACAGGACACGCCACTTGATGTCCTTCCT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTG | + |
Preference number: 4 (lower is better) Translates to: ARGKARRSVLTPEQQDPPSCTTF*TQPHSL Trigger: CAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGA...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGTCACGCCGTGTGCCCTaGGCGCGCAAGATGCGGCTG | + |
Preference number: 4 (lower is better) Translates to: ITELSWIFKALGGGWCCLSRRVP*ARKMRL Trigger: CAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGA...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGAT | + |
Preference number: 4 (lower is better) Translates to: PPTFLWTVHENQGPGPEIAAGRP*GPVGVD Trigger: ATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGC...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAGGGCCCATGCAGGGCTaGAAGTCCTGGGTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: SSAFDGCVSCMLHSGTREGPMQG*KSWVSG Trigger: TCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCC...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGATGGAAGGTGCCTGCATaGTCTTCTTCCTTATCTCCC | + |
Preference number: 4 (lower is better) Translates to: ACSPGLWAAWCPDGRLRRWKVPA*SSSLSP Trigger: GGGAGATAAGGAAGAAGATCATGCAGGCACCTTCCA...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGTGCTGCTCTCACATTaGCAGGCTGCCAGGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLVLLSH*QAARLA Trigger: GGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCAC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTACAGGGCGACCAGGTaGTCCACTCCGACATGGTAC | + |
Preference number: 4 (lower is better) Translates to: LLLQGTEEPVTLETYQDTYRATR*STPTWY Trigger: GTACCATGTCGGAGTGGATCACCTGGTCGCCCTGTA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCC | + |
Preference number: 4 (lower is better) Translates to: HLMAVSPACCILAPENMVALPEI*ASAGGS Trigger: GGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGTGCGTTTCTGTACAATaGTGGCCTTCAGAATCACAC | + |
Preference number: 4 (lower is better) Translates to: GGWCCLLREALSGAGRKWCVSVQ*WPSESH Trigger: GTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCA...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGGGACCTCATGCCCATaGCGCACGAGACGCTACAGG | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLGTSCP*RTRRYR Trigger: CCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCGGCACTCAGGCATCATaGATTTCTCCGCCTGCGATG | + |
Preference number: 4 (lower is better) Translates to: PPTFLWTVHENQGPGPEIGTQAS*ISPPAM Trigger: CATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCC...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | GCCCCAGAACAGCTGGGGTCACTGAGACATGGCTGCTaGGGTAGTCTTCTTGTACCAGAGAGGCTTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: APEQLGSLRHGC*GSLLVPERLLW Trigger: CCACAGAAGCCTCTCTGGTACAAGAAGACTACCCAAGCAGCCATGTCTCAGTGACCCCAGCTGTTCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCACCTGGGCGCGCAAGATaGGGCTGCAGTAGCCCTCCG | + |
Preference number: 4 (lower is better) Translates to: WAFQNWMQGGLMREIQYPPGRAR*GCSSPP Trigger: CGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGG...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTGTGCCTTCAGCATaGGCTGCCGCATCCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: HLMAVSPACCILAPENMVAVPSA*AAASSC Trigger: GCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAATGCAGCCTGGGCCCATaGAGGGCTGGAAGTCCTGGG | + |
Preference number: 4 (lower is better) Translates to: TEEPVTLETYQDTWSCAKCSLGP*RAGSPG Trigger: CCCAGGACTTCCAGCCCTGCATGGGCCCAGGCTGCA...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTC | + |
Preference number: 4 (lower is better) Translates to: HLMAVSPACCILAPENMVRLRCL*LAHGAV Trigger: GACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCG...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACAC | + |
Preference number: 4 (lower is better) Translates to: PPTFLWTVHENQGPGPEITACPC*WRYPKH Trigger: GTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGT...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCAT | + |
Preference number: 4 (lower is better) Translates to: LLLQGTEEPVTLETYQDTRSSLR*VCPSPH Trigger: ATGGGGTGACGGACAGACCCATCTTAGACTGCTGCG...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCGTCAATGGGGCATTCTaGCAGCATGCACTTCTCCGC | + |
Preference number: 4 (lower is better) Translates to: LLLQGTEEPVTLETYQDTVNGAF*QHALLR Trigger: GCGGAGAAGTGCATGCTGCCAGAATGCCCCATTGAC...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | CTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACC | + |
Preference number: 4 (lower is better) Translates to: LHSGTREHGCFS*WMWPGSSPCLT Trigger: GGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | CAGGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTaGAGCAAACACCCATCACAACATCACAGGAGCACC | + |
Preference number: 4 (lower is better) Translates to: QVCAHPLSLLRP*SKHPSQHHRST Trigger: GGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATCTCTTCCTCATCTATaGTCTGGAAGGTGCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGSLPHL*SGRCLH Trigger: ATGCAGGCACCTTCCAGATCATAGATGAGGAAGAGA...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTG | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGLHFYW*AQFSNL Trigger: CAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGCCTTCAGCATGCGCTaGCGCATCCTCTTGCCCTTT | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLAFSMR*RILLPF Trigger: AAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACCTCCGTGGGCAGCATaGACACTGAGCCGTCTTCCG | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIPPWAA*TLSRLP Trigger: CGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGTTTTGCCATTGGTATaGTCTTACCTGTTGTCGAAT | + |
Preference number: 4 (lower is better) Translates to: GGWCCLLREALSGAGRKWVLPLV*SYLLSN Trigger: ATTCGACAACAGGTAAGAGCATACCAATGGCAAAAC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAATGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACC | + |
Preference number: 4 (lower is better) Translates to: SSAFDGCVSCMLHSGTRECPFHK*KSCRPT Trigger: GGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCA...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | CCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTaGCCCTTCTGTCCCTGGATACATGCATTGGATACA | + |
Preference number: 4 (lower is better) Translates to: PTQIPWAPPLLS*PFCPWIHALDT Trigger: TGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: EITELSWIFKALGGGWCCLPRGG*TPCIPH Trigger: GTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAG...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGGGCAATTCTCTCGATaGCGACTCTGGCCACTTGTG | + |
Preference number: 4 (lower is better) Translates to: HLMAVSPACCILAPENMVGQFSR*RLWPLV Trigger: CACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACAGGACAGGGGACACTaGGGTCCAGCTGTGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIQDRGH*GPAVPS Trigger: TGAAGGCACAGCTGGACCTCAGTGTCCCCTGTCCTG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGATCACGCCGTGTGCCCTaGGCGCGCAAGATGCGGCTG | + |
Preference number: 4 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRSRRVP*ARKMRL Trigger: CAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGA...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCAGTTACTCATAAACTaGGTCTCTTCCTCATCTATG | + |
Preference number: 4 (lower is better) Translates to: RGKARRSVLTPEQQDPPGQLLIN*VSSSSM Trigger: CATAGATGAGGAAGAGACCCAGTTTATGAGTAACTG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGTTTCTGTACAATGCTaGCCTTCAGAATCACACAGC | + |
Preference number: 4 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGVSVQC*PSESHS Trigger: GCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAAC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTCACCCCATCAAGTGTaGGATCCTGTTCACACAGCT | + |
Preference number: 4 (lower is better) Translates to: LLLQGTEEPVTLETYQDTSPHQV*DPVHTA Trigger: AGCTGTGTGAACAGGATCCCACACTTGATGGGGTGA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | CAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTaGCAGGCAGACCTTGCAAAGAAAGCACAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: QKASKKVCPFCC*QADLAKKAQHR Trigger: TCTGTGCTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: PPTFLWTVHENQGPGPEISSHKT*VCTWQF Trigger: GAACTGCCAAGTACAGACTCACGTTTTATGGGAACT...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACACTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTG | + |
Preference number: 4 (lower is better) Translates to: GLCSPPQSVEAFEQTPITLHFYW*AQFSNL Trigger: CAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAG...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGC | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIWGPSW*GRTSSG Trigger: GCCACTTGATGTCCTTCCTCACCATGATGGGCCCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAATCCCTCACGCCGTGTaGCCTGGGCGCGCAAGATGC | + |
Preference number: 4 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRIPHAV*PGRARC Trigger: GCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGAT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLSSPPT*SLCPGS Trigger: AGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACCCAGCCACACTCCTTaGTGCACAGATCCTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIPSHTP*CTDPLQ Trigger: CTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
||
CDS-3UTR CCA 90 bp | TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAACCATGGGGACCAGTTaGAGTAGATGCAGGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: SSAFDGCVSCMLHSGTRETMGTS*SRCRFQ Trigger: CTGAAACCTGCATCTACTCCAACTGGTCCCCATGGT...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACC | + |
Preference number: 4 (lower is better) Translates to: TEEPVTLETYQDTWSCAKVQQLA*PLRWHT Trigger: GGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAAC...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAGAGAGCACTCCTCGTTaGCTGTGCACTTCTCCGTCT | + |
Preference number: 4 (lower is better) Translates to: TEEPVTLETYQDTWSCAKESTPR*LCTSPS Trigger: AGACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTC...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAACTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: TEEPVTLETYQDTWSCAKLRTVW*ILTRLS Trigger: GGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAG...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACAGTTTCTGTACAATGCTaGCCTTCAGAATCACACAGC | + |
Preference number: 4 (lower is better) Translates to: GLCSPPQSVEAFEQTPITVSVQC*PSESHS Trigger: GCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAAC...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | TTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATaGGATACATACATCGCCTCTGAGCCCATGGGGGTT | + |
Preference number: 4 (lower is better) Translates to: LLSLPFCPWIHA*DTYIASEPMGV Trigger: AACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | CAGGAGCACCATACATATGGGGCTTCCTCCATCATCTaGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTG | + |
Preference number: 4 (lower is better) Translates to: QEHHTYGASSII*GDAGWKKRRTV Trigger: CACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | ATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTaGGAATGGGGGTGGCGCTGGGGCATGTCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: IHSIAILKLSSD*EWGWRWGMSAW Trigger: CCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | TGGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTaGAAACTCTCATCAGATTTGGAATGGGGGTGGCGC | + |
Preference number: 4 (lower is better) Translates to: WGPCCEIHSIAI*KLSSDLEWGWR Trigger: GCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCG | + |
Preference number: 4 (lower is better) Translates to: CIHSTVCILPTVCIWIKRQFGAF*PGCPRA Trigger: CGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLTSWSR*RFQGCH Trigger: ATGACACCCCTGAAACCTGCATCTACTCCAACTGGT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCACAAGTGGAAGAGCTaGAGGCCGACCATGGGGACC | + |
Preference number: 4 (lower is better) Translates to: CIHSTVCILPTVCIWIKRHKWKS*RPTMGT Trigger: GGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTACTGAGGTCCAGCTGTaGCTTCAGCATGCGCTGCCG | + |
Preference number: 4 (lower is better) Translates to: KPANELTAEINILLLLTVTEVQL*LQHALP Trigger: CGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGT...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: KPANELTAEINILLLLTVGCGTS*VAQSLG Trigger: GCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGA | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIAIQNT*IRVLLR Trigger: TCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCAT | + |
Preference number: 4 (lower is better) Translates to: LTMKTQVISNSQAPMATRRSSLR*VCPSPH Trigger: ATGGGGTGACGGACAGACCCATCTTAGACTGCTGCG...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCAGGGCTGGAAGTCCTaGGTGTCAGGACAGGGGACA | + |
Preference number: 4 (lower is better) Translates to: CIHSTVCILPTVCIWIKRQGWKS*VSGQGT Trigger: TGTCCCCTGTCCTGACACCCAGGACTTCCAGCCCTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAATTGCAGCTGGTAAACTaGGAGCTTTTGAACCTCTTC | + |
Preference number: 4 (lower is better) Translates to: SSAFDGCVSCMLHSGTRELQLVN*ELLNLF Trigger: GAAGAGGTTCAAAAGCTCCCAGTTTACCAGCTGCAA...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | ACAGAGACAGGAGGAAACTTGGAGCTCACTGGCCAGTaGGCTGAGCAAAATTGGTGTGTCCTAGGTCTCTTT | + |
Preference number: 4 (lower is better) Translates to: TETGGNLELTGQ*AEQNWCVLGLF Trigger: AAAGAGACCTAGGACACACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGAAGGTGCCTGCATaGTCTTCTTCCTTATCTCCC | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIWKVPA*SSSLSP Trigger: GGGAGATAAGGAAGAAGATCATGCAGGCACCTTCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGAGGGGTGCTTTCAGTaGCGGCCACAGGACAGTTAC | + |
Preference number: 4 (lower is better) Translates to: KPANELTAEINILLLLTVEGCFQ*RPQDSY Trigger: GTAACTGTCCTGTGGCCGTCACTGAAAGCACCCCTC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGGAGGGGTGCTTTCAGTaGCGGCCACAGGACAGTTAC | + |
Preference number: 4 (lower is better) Translates to: QFGDFVHHCHIRKHGDMQEGCFQ*RPQDSY Trigger: GTAACTGTCCTGTGGCCGTCACTGAAAGCACCCCTC...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGC | + |
Preference number: 4 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRTGTTR*VHSQWG Trigger: GCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTATCTTGACCATACGGTaGCTCTTCTTCATACCCATC | + |
Preference number: 4 (lower is better) Translates to: MGFQSAEGIQESVPVLLLILTIR*LFFIPI Trigger: GATGGGTATGAAGAAGAGGCACCGTATGGTCAAGAT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: LTMKTQVISNSQAPMATRSSPPT*SLCPGS Trigger: AGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACAC | + |
Preference number: 4 (lower is better) Translates to: WLCRGHISILGRPVFLLLTACPC*WRYPKH Trigger: GTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CCA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGCCCACGTTCCAGTCTaGACTGGGGCCCATCATGGT | + |
Preference number: 4 (lower is better) Translates to: MGVRKQAPSFKCDILIWMAHVPV*TGAHHG Trigger: ACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAA | + |
Preference number: 4 (lower is better) Translates to: KPANELTAEINILLLLTVALHSL*AGYTPK Trigger: TTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: ITELSWIFKALGGGWCCLSSHKT*VCTWQF Trigger: GAACTGCCAAGTACAGACTCACGTTTTATGGGAACT...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: TSTVRRTLLILNLFCRLHPSSAT*LTPSLA Trigger: TGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGG...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR TCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGTGACCTTTCCCACATaGCTTGTTACATTCAGACCA | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIVTFPT*LVTFRP Trigger: TGGTCTGAATGTAACAAGTCATGTGGGAAAGGTCAC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGCACGTTGCACGCTCTaGTCTCCTTCTTGTCTTTGC | + |
Preference number: 4 (lower is better) Translates to: CIHSTVCILPTVCIWIKRARCTL*SPSCLC Trigger: GCAAAGACAAGAAGGAGATCAGAGCGTGCAACGTGC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGATCTGGAAGGTGCCTaGATGATCTTCTTCCTTATC | + |
Preference number: 4 (lower is better) Translates to: PTITVLALLSLDTCIGYIDLEGA*MIFFLI Trigger: GATAAGGAAGAAGATCATGCAGGCACCTTCCAGATC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAATGCGTTTCTGTACAATaGTGGCCTTCAGAATCACAC | + |
Preference number: 4 (lower is better) Translates to: TEEPVTLETYQDTWSCAKCVSVQ*WPSESH Trigger: GTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCA...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGATGCACTTCTCCGCCTaGTCCAGGTCCTCGTTACAG | + |
Preference number: 4 (lower is better) Translates to: MGVRKQAPSFKCDILIWMMHFSA*SRSSLQ Trigger: CTGTAACGAGGACCTGGAGCAGGCGGAGAAGTGCAT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGACTCTTCTCTCAGCTaGTCACTCCTCCTGCTCTCT | + |
Preference number: 4 (lower is better) Translates to: KPANELTAEINILLLLTVDSSLS*SLLLLS Trigger: AGAGAGCAGGAGGAGTGAGCAGCTGAGAGAAGAGTC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | GCTAGCGAAGCCTGCCACCATCTGAAGGAGCTTAGATaGTCATGGTTTGAGGATAAGTTGACAAGACCACTA | + |
Preference number: 4 (lower is better) Translates to: ASEACHHLKELR*SWFEDKLTRPL Trigger: TAGTGGTCTTGTCAACTTATCCTCAAACCATGACAATCTAAGCTCCTTCAGATGGTGGCAGGCTTCGCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCGGGTTCGAATCATGTaGCCTTTCCCACATGACTTG | + |
Preference number: 4 (lower is better) Translates to: CIHSTVCILPTVCIWIKRRVRIM*PFPHDL Trigger: CAAGTCATGTGGGAAAGGTCACATGATTCGAACCCG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATATCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCA | + |
Preference number: 4 (lower is better) Translates to: NVGLTRLQLVWGWCKIYISRRCQ*QHPRES Trigger: TGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGA...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR GCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATACGGCACTTCTTGCGTTaGACAGTCTCTGGGCAGGGT | + |
Preference number: 4 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIRHFLR*TVSGQG Trigger: ACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCG...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | AGGAGGCCAGGTTTTAGTCTCAGTAGCTTCAGTAGATaGCCCTCTGATAAAACACATTGGCATGGTGATAGG | + |
Preference number: 4 (lower is better) Translates to: RRPGFSLSSFSR*PSDKTHWHGDR Trigger: CCTATCACCATGCCAATGTGTTTTATCAGAGGGCAATCTACTGAAGCTACTGAGACTAAAACCTGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CCA 90 bp | GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACTCACCCCATCAAGTGTaGGATCCTGTTCACACAGCT | + |
Preference number: 4 (lower is better) Translates to: EPDKLGLKVLRNLRTLTDSPHQV*DPVHTA Trigger: AGCTGTGTGAACAGGATCCCACACTTGATGGGGTGA...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | ATCAGAAAGCATGGTGACATGCAGGCAGACATGGTATaGGAGAAGGAGCTAAGAGTTCTACATCTGGATTCA | + |
Preference number: 4 (lower is better) Translates to: IRKHGDMQADMV*EKELRVLHLDS Trigger: TGAATCCAGATGTAGAACTCTTAGCTCCTTCTCCAATACCATGTCTGCCTGCATGTCACCATGCTTTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR GCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCG | + |
Preference number: 4 (lower is better) Translates to: NVGLTRLQLVWGWCKIYITVTQL*QRFEHP Trigger: CGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGT...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR TCA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGGTACACCCCCAAACTaGGGTTCCATTTGGATTGTC | + |
Preference number: 4 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIGTPPN*GSIWIV Trigger: GACAATCCAAATGGAACCTCAGTTTGGGGGTGTACC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | GCAGTAAGCAAGACCAGCACTGTTAGGAGGACACTCTaGATCTTGAATTTATTTTGCCGGCTTCATTATTTC | + |
Preference number: 4 (lower is better) Translates to: AVSKTSTVRRTL*ILNLFCRLHYF Trigger: GAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCTTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | GGCTCTCGTGTGTTAAGGAAAATACATATTCAGGGGTaGTACATAGATGTGGCTGGACATATTCTGATATGT | + |
Preference number: 4 (lower is better) Translates to: GSRVLRKIHIQG*YIDVAGHILIC Trigger: ACATATCAGAATATGTCCAGCCACATCTATGTACAACCCCTGAATATGTATTTTCCTTAACACACGAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | TCAATATCTGATTGGGAAACATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAA | + |
Preference number: 4 (lower is better) Translates to: SISDWETSYNVG*TRLQLVWGWCK Trigger: TTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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3UTR CAA 72 bp | TGTCTCTTTCCAGAAGTGACAATTTGCTTAGACAGCTaGAAGATTATCCTCTACCCTCAAGAACCAAAGTAT | + |
Preference number: 4 (lower is better) Translates to: CLFPEVTICLDS*KIILYPQEPKY Trigger: ATACTTTGGTTCTTGAGGGTAGAGGATAATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGAAAGAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | CCAACACATAAAATGTCTCTTTCCAGAAGTGACAATTaGCTTAGACAGCTTGAAGATTATCCTCTACCCTCA | + |
Preference number: 4 (lower is better) Translates to: PTHKMSLSRSDN*LRQLEDYPLPS Trigger: TGAGGGTAGAGGATAATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGAAAGAGACATTTTATGTGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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3UTR CAA 72 bp | AGCAAGACCAGCACTGTTAGGAGGACACTCTTGATCTaGAATTTATTTTGCCGGCTTCATTATTTCTTTGTA | + |
Preference number: 4 (lower is better) Translates to: SKTSTVRRTLLI*NLFCRLHYFFV Trigger: TACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS TCA 90 bp | CCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCCGCATGCCCTTCCCACAGGTCACGC | + |
Preference number: 5 (lower is better) Translates to: PAPGPRYSHPALPEI*ASAGGSACPSHRSR Trigger: GCGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | ACTCCTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTaGTGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTG | + |
Preference number: 5 (lower is better) Translates to: TPPALSGLPPAQLLD*WAAKAFPGAALLAL Trigger: CAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAGGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | CCGTGTATCCCTCACGCCGTGTGCCCTGGGCGCGCAAGATGCGGCTaGAGTAGCCCTCCGACTTGGTCACTTTGTCCAGGGTCTCATCTG | + |
Preference number: 5 (lower is better) Translates to: PCIPHAVCPGRARCG*SSPPTWSLCPGSHL Trigger: CAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGATACACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS GCA 90 bp | GTCTCCTCCGTGGGCAGCATGCACACTGAGCCGTCTTCCGGGAACTaGTTCACGTATCTCTCCCGGGACCTCATGCCCATGCCGCACGAG | + |
Preference number: 5 (lower is better) Translates to: VSSVGSMHTEPSSGN*FTYLSRDLMPMPHE Trigger: CTCGTGCGGCATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | GCACTTCTCCGCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCGCTGGCGGGTCCGCATGCCCTTCCC | + |
Preference number: 5 (lower is better) Translates to: ALLRLLQVLVTVTQL*QRFEHPLAGPHALP Trigger: GGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGCGGAGAAGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | TGCTCACTCCTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTaGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: CSLLLLSRASLQRSF*TDGLRRHFRVRHFL Trigger: CAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAGGAGTGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | TGCTTCCTGGCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCACGCCGTGTGCCCTGGGCGCGCAAGA | + |
Preference number: 5 (lower is better) Translates to: CFLAYRSQGRLPRGG*TPCIPHAVCPGRAR Trigger: TCTTGCGCGCCCAGGGCACACGGCGTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS TCA 90 bp | GGGACCTCATGCCCATGCCGCACGAGACGCTACAGGGCGACCAGGTaGTCCACTCCGACATGGTACAGGTGGAGCCATCTTCATCGCTGC | + |
Preference number: 5 (lower is better) Translates to: GTSCPCRTRRYRATR*STPTWYRWSHLHRC Trigger: GCAGCGATGAAGATGGCTCCACCTGTACCATGTCGGAGTGGATCACCTGGTCGCCCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | TCCAGCGCAGCTTCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTaGGGCACTTCTTGCGTTGCACAGTCTCTGGGCAGGGTACACCCC | + |
Preference number: 5 (lower is better) Translates to: SSAASGLMGCEGISG*GTSCVAQSLGRVHP Trigger: GGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | TGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTGATGGGCTaGGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCT | + |
Preference number: 5 (lower is better) Translates to: CSLGPPSSAASGLMG*EGISGCGTSCVAQS Trigger: AGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | GTGTGCCCTGGGCGCGCAAGATGCGGCTGCAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCTCATCTGAGAAAGCTAGCGCTGCGG | + |
Preference number: 5 (lower is better) Translates to: VCPGRARCGCSSPPT*SLCPGSHLRKLALR Trigger: CCGCAGCGCTAGCTTTCTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAGCTCTGCCAGAGATTaGAGCATCCGCTGGCGGGTC | + |
Preference number: 5 (lower is better) Translates to: RGKARRSVLTPEQQDPPGSSARD*SIRWRV Trigger: GACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | GCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACGGTaGCTCTTCTTCATACCCATCCCACAGGTGGCACTGCAGTCGTCC | + |
Preference number: 5 (lower is better) Translates to: ALHMEPSAGLILTIR*LFFIPIPQVALQSS Trigger: GGACGACTGCAGTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | TCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTGAGCATCCGCTaGCGGGTCCGCATGCCCTTCCCACAGGTCACGCTACAGTCGCTC | + |
Preference number: 5 (lower is better) Translates to: SSLQSPSSARDLSIR*RVRMPFPQVTLQSL Trigger: GAGCGACTGTAGCGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | GTTGACTGTGCACTTCTCCGTCTCCTCCGTGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTGCTTCACGTATCTCTCCCGGGACCT | + |
Preference number: 5 (lower is better) Translates to: VDCALLRLLRGQHAH*AVFRELLHVSLPGP Trigger: AGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGACGGAGAAGTGCACAGTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | GCGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTaGCCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTGGCAC | + |
Preference number: 5 (lower is better) Translates to: AMSLPCTWSRPRGSS*PYGASSSYPSHRWH Trigger: GTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | CATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCGCATTCGACAGCCTGGGAACTGCTC | + |
Preference number: 5 (lower is better) Translates to: HVALLDPTSAQFGAF*PGCPRAHSTAWELL Trigger: GAGCAGTTCCCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | AAGCACGGGATGGTATGGCACTCAGGCATCATGCATTTCTCCGCCTaGGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATC | + |
Preference number: 5 (lower is better) Translates to: KHGMVWHSGIMHFSA*DVSALHMEPSAGLI Trigger: GATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCATCCCGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTAACGTGAGTCTGTACTaGGCAGTTCCACAGGCGCAG | + |
Preference number: 5 (lower is better) Translates to: ARGKARRSVLTPEQQDPPNVSLY*AVPQAQ Trigger: CTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | GGTATGGCACTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACG | + |
Preference number: 5 (lower is better) Translates to: GMALRHHAFLRLRCL*LAHGAVRGAHLDHT Trigger: CGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | TCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGCAGGGTACACCCCCAAACTGAGGTT | + |
Preference number: 5 (lower is better) Translates to: SGLMGCEGISGCGTS*VAQSLGRVHPQTEV Trigger: AACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | TCACAGTCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCCACGGGCGCATTCGACAGCCTGGGA | + |
Preference number: 5 (lower is better) Translates to: SQSCSALGSHLRTVW*ILTRLSTGAFDSLG Trigger: TCCCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACTGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | GTGCCTTCAGCATGCGCTGCCGCATCCTCTTGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACCATGGGGACCAGTTGGAGTAGATGC | + |
Preference number: 5 (lower is better) Translates to: VPSACAAASSCPFHK*KSCRPTMGTSWSRC Trigger: GCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTGTTCACACAGCTTCTaGGTCAGGGAGCCCTCGTCT | + |
Preference number: 5 (lower is better) Translates to: LQLHAVQDCGQPGVQMVGCSHSF*VREPSS Trigger: AGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACA...GCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCG | + |
Preference number: 5 (lower is better) Translates to: LLLQGTEEPVTLETYQDTCDVSA*HMEPSA Trigger: CGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | AGAATCACACAGCCTGTCCCTGTTGGTGGCGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGAGGGGTGCTTTCAGTGACGGCCACA | + |
Preference number: 5 (lower is better) Translates to: RITQPVPVGGAIQNT*IRVLLRGVLSVTAT Trigger: TGTGGCCGTCACTGAAAGCACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 90 bp | GCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATTGTCCG | + |
Preference number: 5 (lower is better) Translates to: AKAFPGAALLALHSL*AGYTPKLRFHLDCP Trigger: CGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | TCTTCACAGTCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCTGTCCACGGGCGCATTCGACAGCCTG | + |
Preference number: 5 (lower is better) Translates to: SSQSCSALGSHLRTV*CILTRLSTGAFDSL Trigger: CAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACTGTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | CTGCAGATAGGCCCACGTTCCAGTCTGGACTGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGCGTGTCCTGTCCACTGAGAATTCAG | + |
Preference number: 5 (lower is better) Translates to: LQIGPRSSLDWGPSW*GRTSSGVSCPLRIQ Trigger: CTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGCCTATCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | GAATCAGGTCCTGCACTACTTTCTGGACCCAGCCACACTCCTTGGTaGACAGATCCTCTGCAGATAGGCCCACGTTCCAGTCTGGACTGG | + |
Preference number: 5 (lower is better) Translates to: ESGPALLSGPSHTPW*TDPLQIGPRSSLDW Trigger: CCAGTCCAGACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | CTGTACAATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTGGTaGCGCTATCCAAAACACCTGGATCCGTGTCCTCCTCCGAGGGGT | + |
Preference number: 5 (lower is better) Translates to: LYNAGLQNHTACPCW*RYPKHLDPCPPPRG Trigger: ACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 90 bp | TTCCAGTCTGGACTGGGGCCCATCATGGTGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAGAATTCAGCTGAGGGTGCTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: FQSGLGPIMVRKDIK*RVLSTENSAEGAAL Trigger: GAGAGCAGCACCCTCAGCTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | CTGTCAGTGCCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTGGTGCACAGATCCTCTGCAGATAGG | + |
Preference number: 5 (lower is better) Translates to: LSVPASQGIRSCTTF*TQPHSLVHRSSADR Trigger: CCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCACAGCCTGTCCCTGTaGGTGGCGCTATCCAAAACA | + |
Preference number: 5 (lower is better) Translates to: PPTFLWTVHENQGPGPEIHSLSL*VALSKT Trigger: TGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCGCTGCCGCATCCTCTaGCCCTTTTCACAAGTGGAA | + |
Preference number: 5 (lower is better) Translates to: PPTFLWTVHENQGPGPEIRCRIL*PFSQVE Trigger: TTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | GAATTGTGGGCTTGTTTGGTGACTCATAGGTCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTGGACCC | + |
Preference number: 5 (lower is better) Translates to: ELWACLVTHRSRRCQ*QHPRESGPALLSGP Trigger: GGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGACCTATGAGTCACCAAACAAGCCCACAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | GCTGAGGGTGCTGCTCTCACATTGACAGGCTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACAGTGAGGACTTCATCACTCTGTTGT | + |
Preference number: 5 (lower is better) Translates to: AEGAALTLTGCQAGH*ALALMTVRTSSLCC Trigger: ACAACAGAGTGATGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCACCCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACACTGGGCTTTGGCTTaGATGACAGTGAGGACTTCA | + |
Preference number: 5 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGHWALA*MTVRTS Trigger: TGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTACAATATCGTCCACGTaGTCAGGTACAATGTTGCAC | + |
Preference number: 5 (lower is better) Translates to: ARGKARRSVLTPEQQDPPTISST*SGTMLH Trigger: GTGCAACATTGTACCTGACAACGTGGACGATATTGT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAAACTGAGGTTCCATTaGGATTGTCCGGGTTCGAAT | + |
Preference number: 5 (lower is better) Translates to: RGKARRSVLTPEQQDPPGKLRFH*DCPGSN Trigger: ATTCGAACCCGGACAATCCAAATGGAACCTCAGTTT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | TTTCTGTACAATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACACCTGGATCCGTGTCCTCCTCCGAGG | + |
Preference number: 5 (lower is better) Translates to: FLYNAGLQNHTACPC*WRYPKHLDPCPPPR Trigger: CCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 90 bp | CATCCTCTTGCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGTGTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: HPLALFTSGRAAGRP*GPVGVDAGFRGVIF Trigger: GAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCCTCCTGGTTCTCTTaGAGGGCAATTAACGTGAAA | + |
Preference number: 5 (lower is better) Translates to: QPRFPGPHHYCPCPSVPGPSWFS*RAINVK Trigger: TTTCACGTTAATTGCCCTCAAAGAGAACCAGGAGGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTT | + |
Preference number: 5 (lower is better) Translates to: RGKARRSVLTPEQQDPPGQGALV*KINYAF Trigger: AAACGCATAATTTATTTTCAAGACGAGGGCTCCCTG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACAAGTTCAGCAACTTGCTaGACCCCTTCGCTGGCATAC | + |
Preference number: 5 (lower is better) Translates to: GLCSPPQSVEAFEQTPITSSATC*TPSLAY Trigger: GTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACT...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS CCA 90 bp | TCTCTCGATGACGACTCTGGCCACTTGTGTGATGGACCCACCTTCTaGGTCATAGAAAGGACTCTGAGGATGATCCAGACTAGTCAGGGG | + |
Preference number: 5 (lower is better) Translates to: SLDDDSGHLCDGPTF*VIERTLRMIQTSQG Trigger: CCCCTGACTAGTCTGGATCATCCTCAGAGTCCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTTGTTCACACAGCTTCTaGGTCAGGGAGCCCTCGTCT | + |
Preference number: 5 (lower is better) Translates to: HLMAVSPACCILAPENMVCSHSF*VREPSS Trigger: AGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACA...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | CTTTCCCACATGACTTGTTACATTCAGACCACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGCATTCTGGCAGCATGCACTTCTCCG | + |
Preference number: 5 (lower is better) Translates to: LSHMTCYIQTTGTTR*VHSQWGILAACTSP Trigger: CGGAGAAGTGCATGCTGCCAGAATGCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCATGTGGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 90 bp | CGAATTTCTTCCTCCATTTTTACTGGTGAGCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCATACCCTCCATACTCCCACAGCACG | + |
Preference number: 5 (lower is better) Translates to: RISSSIFTGEPSSAT*LTPSLAYPPYSHST Trigger: CGTGCTGTGGGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGCCCAGTTCAGCAACTaGCTTGACCCCTTCGCTGGC | + |
Preference number: 5 (lower is better) Translates to: LTMKTQVISNSQAPMATRAQFSN*LDPFAG Trigger: GCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS TCA 90 bp | GGTAATCCTTCGGATGAGTCTTCTCGGACCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTCCACAGGCGCAGCAGTCTAAGATGG | + |
Preference number: 5 (lower is better) Translates to: GNPSDESSRTSSHKT*VCTWQFHRRSSLRW Trigger: CCATCTTAGACTGCTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTTTTATGGGAACTGGTCCGAGAAGACTCATCCGAAGGATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTTTGTCAGGTACAATGTaGCACTGTTCTCCCTTCCGG | + |
Preference number: 5 (lower is better) Translates to: HLMAVSPACCILAPENMVLSGTM*HCSPFR Trigger: CCGGAAGGGAGAACAGTGCAACATTGTACCTGACAA...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGACGGGTGCGGCACTTCTaGCGTTGCACAGTCTCTGGG | + |
Preference number: 5 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRRVRHF*RCTVSG Trigger: CCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCG...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGGTGCTGCTCTCACATaGACAGGCTGCCAGGCTGGC | + |
Preference number: 5 (lower is better) Translates to: MGVRKQAPSFKCDILIWMGAALT*TGCQAG Trigger: GCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCACC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGCGGCACTTCTTGCGTaGCACAGTCTCTGGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: MGVRKQAPSFKCDILIWMAALLA*HSLWAG Trigger: CCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | GACTTCATCACTCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCTGGCATACCC | + |
Preference number: 5 (lower is better) Translates to: DFITLLSNFFLHFYW*AQFSNLLDPFAGIP Trigger: GGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 90 bp | GTATGCTCTTACCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCTGGCATACCC | + |
Preference number: 5 (lower is better) Translates to: VCSYLLSNFFLHFYW*AQFSNLLDPFAGIP Trigger: GGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGGTAAGAGCATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTTCCGACTTGGTCACTTaGTCCAGGGTCTCATCTGAG | + |
Preference number: 5 (lower is better) Translates to: WLCRGHISILGRPVFLLLSDLVT*SRVSSE Trigger: CTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGA...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGCCCTCCTGGTTCTCTTaGAGGGCAATTAACGTGAAA | + |
Preference number: 5 (lower is better) Translates to: HSFPIIKLISRKLGQLGWPSWFS*RAINVK Trigger: TTTCACGTTAATTGCCCTCAAAGAGAACCAGGAGGG...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGGAGAGCACTCCTCGTaGACTGTGCACTTCTCCGTC | + |
Preference number: 5 (lower is better) Translates to: CIHSTVCILPTVCIWIKRGEHSS*TVHFSV Trigger: GACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTCC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGAGTCATGTAGCGCTCTaGGATCCCACCTCCGCACAG | + |
Preference number: 5 (lower is better) Translates to: CIHSTVCILPTVCIWIKRSHVAL*DPTSAQ Trigger: CTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACT...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 90 bp | TGTCCGTCACCCCATCAAGTGTGGGATCCTGTTCACACAGCTTCTTaGTCAGGGAGCCCTCGTCTTGAAAATAAATTATGCGTTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: CPSPHQVWDPVHTAS*SGSPRLENKLCVSV Trigger: TACAGAAACGCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAGGATCCCACACTTGATGGGGTGACGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGAACGTGAGTCTGTACTaGGCAGTTCCACAGGCGCAG | + |
Preference number: 5 (lower is better) Translates to: QFGDFVHHCHIRKHGDMQNVSLY*AVPQAQ Trigger: CTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTT...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGACCCAGCCACACTCCTaGGTGCACAGATCCTCTGCA | + |
Preference number: 5 (lower is better) Translates to: MGVRKQAPSFKCDILIWMTQPHS*VHRSSA Trigger: TGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTT | + |
Preference number: 5 (lower is better) Translates to: ITELSWIFKALGGGWCCLQGALV*KINYAF Trigger: AAACGCATAATTTATTTTCAAGACGAGGGCTCCCTG...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS-3UTR CAA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGAGTTCAGCAACTTGCTaGACCCCTTCGCTGGCATAC | + |
Preference number: 5 (lower is better) Translates to: CIHSTVCILPTVCIWIKRSSATC*TPSLAY Trigger: GTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACT...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGCCCAGTTCAGCAACTaGCTTGACCCCTTCGCTGGC | + |
Preference number: 5 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIAQFSN*LDPFAG Trigger: GCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGTCCGACTTGGTCACTTaGTCCAGGGTCTCATCTGAG | + |
Preference number: 5 (lower is better) Translates to: MGVRKQAPSFKCDILIWMSDLVT*SRVSSE Trigger: CTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGA...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGACGACTCTGGCCACTaGTGTGATGGACCCACCTTC | + |
Preference number: 5 (lower is better) Translates to: NVGLTRLQLVWGWCKIYIDDSGH*CDGPTF Trigger: GAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGT | + |
Preference number: 5 (lower is better) Translates to: CIHSTVCILPTVCIWIKREVPFG*SGFESC Trigger: ACATGATTCGAACCCGGACAATCCAAATGGAACCTC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAATCTCCTTCTTGTCTTaGCAGCTGGTAAACTGGGAG | + |
Preference number: 5 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRISFLS*QLVNWE Trigger: CTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGAT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGACTTCATCACTCTGTaGTCGAATTTCTTCCTCCAT | + |
Preference number: 5 (lower is better) Translates to: FSDFNNLCWLGTVSLVLRDFITL*SNFFLH Trigger: ATGGAGGAAGAAATTCGACAACAGAGTGATGAAGTC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGTAAACTGGGAGCTTTaGAACCTCTTCTTCACAGTC | + |
Preference number: 5 (lower is better) Translates to: MGVRKQAPSFKCDILIWMVNWEL*NLFFTV Trigger: GACTGTGAAGAAGAGGTTCAAAAGCTCCCAGTTTAC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS-3UTR CAA 90 bp | TCAAATCAAATGGAGGAGAAACATAAGCTCATTCTGAAGATGTTCTCACACTGTGTATGCTCTTACCTGTaGTCGAATTTCTTCCTCCAT | + |
Preference number: 5 (lower is better) Translates to: SNQMEEKHKLILKMFSHCVCSYL*SNFFLH Trigger: ATGGAGGAAGAAATTCGACAACAGGTAAGAGCATAC...ACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS GCA 72 bp | CCTCACGCCGTGTGCCCTGGGCGCGCAAGATGCGGCTaGAGTAGCCCTCCGACTTGGTCACTTTGTCCAGGG | + |
Preference number: 6 (lower is better) Translates to: PHAVCPGRARCG*SSPPTWSLCPG Trigger: CCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 72 bp | CTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTaGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGG | + |
Preference number: 6 (lower is better) Translates to: LLLSRASLQRSF*TDGLRRHFRVR Trigger: CCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | GCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTaGTGGGCTGCGAAGGCATTTCCGGGTGCGGCACTT | + |
Preference number: 6 (lower is better) Translates to: ALSGLPPAQLLD*WAAKAFPGAAL Trigger: AAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | CCGGGAACTGCTTCACGTATCTCTCCCGGGACCTCATaGCCATGCCGCACGAGACGCTACAGGGCGACCAGG | + |
Preference number: 6 (lower is better) Translates to: PGTASRISPGTS*PCRTRRYRATR Trigger: CCTGGTCGCCCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | GGGCCTCCCTCCAGCGCAGCTTCTGGACTGATGGGCTaGGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTT | + |
Preference number: 6 (lower is better) Translates to: GPPSSAASGLMG*EGISGCGTSCV Trigger: AACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | GCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTaGAGCATCCGCTGGCGGGTCCGCATGCCCTTCCCACAGGTCACG | + |
Preference number: 6 (lower is better) Translates to: ACSRSSLQSPSSARD*SIRWRVRMPFPQVT Trigger: CGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | GCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCACGCCGTGTGCCCTGGG | + |
Preference number: 6 (lower is better) Translates to: AYRSQGRLPRGG*TPCIPHAVCPG Trigger: CCCAGGGCACACGGCGTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAGGCGACCCTGACTTCTATAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS TCA 72 bp | GGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCCGCATGCCCTTCCCAC | + |
Preference number: 6 (lower is better) Translates to: GPRYSHPALPEI*ASAGGSACPSH Trigger: GTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | CGCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCGCTGGCGGGTCCGCAT | + |
Preference number: 6 (lower is better) Translates to: RLLQVLVTVTQL*QRFEHPLAGPH Trigger: ATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | GATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTaGCGTTGCACAGTCTCTGGGCAGGGTACACCCCCA | + |
Preference number: 6 (lower is better) Translates to: DGLRRHFRVRHF*RCTVSGQGTPP Trigger: TGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | GGCCCACGTTCCAGTCTGGACTGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGCGTGTCCTGTCCACTG | + |
Preference number: 6 (lower is better) Translates to: GPRSSLDWGPSW*GRTSSGVSCPL Trigger: CAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | CTCTTGGATCCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCGCATTCGACAGCCTGG | + |
Preference number: 6 (lower is better) Translates to: LLDPTSAQFGAF*PGCPRAHSTAW Trigger: CCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | CCAGCTGTGCCTTCAGCATGCGCTGCCGCATCCTCTTaGCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACC | + |
Preference number: 6 (lower is better) Translates to: PAVPSACAAASS*PFHKWKSCRPT Trigger: GGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | GTGGGCAGCATGCACACTGAGCCGTCTTCCGGGAACTaGTTCACGTATCTCTCCCGGGACCTCATGCCCATG | + |
Preference number: 6 (lower is better) Translates to: VGSMHTEPSSGN*FTYLSRDLMPM Trigger: CATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | ATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGCAGGGTACACCCCCAA | + |
Preference number: 6 (lower is better) Translates to: MGCEGISGCGTS*VAQSLGRVHPQ Trigger: TTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | GCTTCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTaGGGCACTTCTTGCGTTGCACAGTCTCTGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: ASGLMGCEGISG*GTSCVAQSLGR Trigger: CCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | GCATGCGCTGCCGCATCCTCTTGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACCATGGGGACCAGTTGG | + |
Preference number: 6 (lower is better) Translates to: ACAAASSCPFHK*KSCRPTMGTSW Trigger: CCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | TCAGTCACCAGGCAGCTGCTAGGAGAGCACTCCTCGTaGACTGTGCACTTCTCCGTCTCCTCCGTGGGCAGC | + |
Preference number: 6 (lower is better) Translates to: SVTRQLLGEHSS*TVHFSVSSVGS Trigger: GCTGCCCACGGAGGAGACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTCCTAGCAGCTGCCTGGTGACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | GGCATCATGCATTTCTCCGCCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCGGGGCTCATCTTGACC | + |
Preference number: 6 (lower is better) Translates to: GIMHFSACDVSA*HMEPSAGLILT Trigger: GGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | GCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTaGCACAGTCTCTGGGCAGGGTACACCCCCAAACTG | + |
Preference number: 6 (lower is better) Translates to: AAKAFPGAALLA*HSLWAGYTPKL Trigger: CAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | ACACTGAGGTCCAGCTGTGCCTTCAGCATGCGCTGCCGCATCCTCTaGCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATGGGGAC | + |
Preference number: 6 (lower is better) Translates to: TLRSSCAFSMRCRIL*PFSQVEELQADHGD Trigger: GTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | TGGCACTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACGGTGC | + |
Preference number: 6 (lower is better) Translates to: WHSGIMHFSACDVSA*HMEPSAGLILTIRC Trigger: GCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | GCACTTCTCCGTCTCCTCCGTGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTGCTTCACGTATCTCTC | + |
Preference number: 6 (lower is better) Translates to: ALLRLLRGQHAH*AVFRELLHVSL Trigger: GAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGACGGAGAAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | CTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTaGCCATACGGTGCCTCTTCTTCATACCCATCCCAC | + |
Preference number: 6 (lower is better) Translates to: LPCTWSRPRGSS*PYGASSSYPSH Trigger: GTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | CCGCTGTCAGTGCCAGCATCCCAGGGAATCAGGTCCTaGACTACTTTCTGGACCCAGCCACACTCCTTGGTG | + |
Preference number: 6 (lower is better) Translates to: PLSVPASQGIRS*TTFWTQPHSLV Trigger: CACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | CTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTCCGCGGGGCTCATCTT | + |
Preference number: 6 (lower is better) Translates to: LRHHAFLRLRCL*LAHGAVRGAHL Trigger: AAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | TGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCCACGGGCGCATTCGAC | + |
Preference number: 6 (lower is better) Translates to: CSALGSHLRTVW*ILTRLSTGAFD Trigger: GTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | CAGCCTGTCCCTGTTGGTGGCGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGAGGGGTGCTTTCAGTG | + |
Preference number: 6 (lower is better) Translates to: QPVPVGGAIQNT*IRVLLRGVLSV Trigger: CACTGAAAGCACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CAA 90 bp | TGCGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTaGACCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTGGCA | + |
Preference number: 6 (lower is better) Translates to: CDVSALHMEPSAGLI*TIRCLFFIPIPQVA Trigger: TGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | GGGACACTGAGGTCCAGCTGTGCCTTCAGCATGCGCTaGCGCATCCTCTTGCCCTTTTCACAAGTGGAAGAG | + |
Preference number: 6 (lower is better) Translates to: GTLRSSCAFSMR*RILLPFSQVEE Trigger: CTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | ATGGTATGGCACTCAGGCATCATGCATTTCTCCGCCTaGGATGTCTCTGCCTTGCACATGGAGCCGTCCGCG | + |
Preference number: 6 (lower is better) Translates to: MVWHSGIMHFSA*DVSALHMEPSA Trigger: CGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | GGGCGCGCAAGATGCGGCTGCAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCTCATCTGAGAAAGCTA | + |
Preference number: 6 (lower is better) Translates to: GRARCGCSSPPT*SLCPGSHLRKL Trigger: TAGCTTTCTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 72 bp | AGGAGCAGCCGAAAGTGTCACTCGGTAGCTGCTTCCTaGCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAG | + |
Preference number: 6 (lower is better) Translates to: RSSRKCHSVAAS*LIEVRVAFHAE Trigger: CTCCGCGTGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCAGCTACCGAGTGACACTTTCGGCTGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 72 bp | CCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTaGCACTGCAGTCGTCCCACTCACCCCACTCAGTCA | + |
Preference number: 6 (lower is better) Translates to: PYGASSSYPSHR*HCSRPTHPTQS Trigger: TGACTGAGTGGGGTGAGTGGGACGACTGCAGTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | TCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCTGTCCACGGGCGCATTC | + |
Preference number: 6 (lower is better) Translates to: SCSALGSHLRTV*CILTRLSTGAF Trigger: GAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | TCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTaGACCATACGGTGCCTCTTCTTCATACCCATCCCA | + |
Preference number: 6 (lower is better) Translates to: SALHMEPSAGLI*TIRCLFFIPIP Trigger: TGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | CAGGGAATCAGGTCCTGCACTACTTTCTGGACCCAGCCACACTCCTaGGTGCACAGATCCTCTGCAGATAGGCCCACGTTCCAGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: QGIRSCTTFWTQPHS*VHRSSADRPTFQSG Trigger: TCCAGACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | AGGAGGGAGGAGCAGCCGAAAGTGTCACTCGGTAGCTaGTTCCTGGCTTATAGAAGTCAGGGTCGCCTTCCA | + |
Preference number: 6 (lower is better) Translates to: RREEQPKVSLGS*FLAYRSQGRLP Trigger: TGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCAGCTACCGAGTGACACTTTCGGCTGCTCCTCCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS GCA 72 bp | CCTGCACTACTTTCTGGACCCAGCCACACTCCTTGGTaGACAGATCCTCTGCAGATAGGCCCACGTTCCAGT | + |
Preference number: 6 (lower is better) Translates to: PALLSGPSHTPW*TDPLQIGPRSS Trigger: ACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | GGACTGGGGCCCATCATGGTGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAGAATTCAGCTGAGGGT | + |
Preference number: 6 (lower is better) Translates to: GLGPIMVRKDIK*RVLSTENSAEG Trigger: ACCCTCAGCTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | CCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTGGTGCACAGATCCTCT | + |
Preference number: 6 (lower is better) Translates to: PASQGIRSCTTF*TQPHSLVHRSS Trigger: AGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | GCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGT | + |
Preference number: 6 (lower is better) Translates to: ALFTSGRAAGRP*GPVGVDAGFRG Trigger: ACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | TTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAACTGAGGTTCCATTTG | + |
Preference number: 6 (lower is better) Translates to: FPGAALLALHSL*AGYTPKLRFHL Trigger: CAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | GCTTGTTTGGTGACTCATAGGTCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCAGGTCCTGCACTACTT | + |
Preference number: 6 (lower is better) Translates to: ACLVTHRSRRCQ*QHPRESGPALL Trigger: AAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGACCTATGAGTCACCAAACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS GCA 72 bp | ACAGCAAGCACGGGATGGTATGGCACTCAGGCATCATaGATTTCTCCGCCTGCGATGTCTCTGCCTTGCACA | + |
Preference number: 6 (lower is better) Translates to: TASTGWYGTQAS*ISPPAMSLPCT Trigger: TGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCATCCCGTGCTTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | TGTACTTGGCAGTTCCACAGGCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCATCAAGTGTGGGATCCT | + |
Preference number: 6 (lower is better) Translates to: CTWQFHRRSSLR*VCPSPHQVWDP Trigger: AGGATCCCACACTTGATGGGGTGACGGACAGACCCATCTTAGACTGCTGCGCCTGTGGAACTGCCAAGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CCA 72 bp | GCTGCTCTCACATTGACAGGCTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACAGTGAGGACTTCATCA | + |
Preference number: 6 (lower is better) Translates to: AALTLTGCQAGH*ALALMTVRTSS Trigger: TGATGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | CTGTTCTCCCTTCCGGGCAATTCTCTCGATGACGACTCTGGCCACTaGTGTGATGGACCCACCTTCTGGGTCATAGAAAGGACTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: LFSLPGNSLDDDSGH*CDGPTFWVIERTLR Trigger: CCTCAGAGTCCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCCGGAAGGGAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | CGTTGCACAGTCTCTGGGCAGGGTACACCCCCAAACTaGGGTTCCATTTGGATTGTCCGGGTTCGAATCATG | + |
Preference number: 6 (lower is better) Translates to: RCTVSGQGTPPN*GSIWIVRVRIM Trigger: CATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | AATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACACCTGGATCCGTGTCCT | + |
Preference number: 6 (lower is better) Translates to: NAGLQNHTACPC*WRYPKHLDPCP Trigger: AGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS CAA 72 bp | CTTCCGGGCAATTCTCTCGATGACGACTCTGGCCACTaGTGTGATGGACCCACCTTCTGGGTCATAGAAAGG | + |
Preference number: 6 (lower is better) Translates to: LPGNSLDDDSGH*CDGPTFWVIER Trigger: CCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCCGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | CTCTGGGCAGGGTACACCCCCAAACTGAGGTTCCATTaGGATTGTCCGGGTTCGAATCATGTGACCTTTCCC | + |
Preference number: 6 (lower is better) Translates to: LWAGYTPKLRFH*DCPGSNHVTFP Trigger: GGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | TCGGATGAGTCTTCTCGGACCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTCCACAGGCGCAGCAGT | + |
Preference number: 6 (lower is better) Translates to: SDESSRTSSHKT*VCTWQFHRRSS Trigger: ACTGCTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTTTTATGGGAACTGGTCCGAGAAGACTCATCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS TCA 72 bp | CCATTTTTACTGGTGAGCCCAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACCCTCCATACTCCCACA | + |
Preference number: 6 (lower is better) Translates to: PFLLVSPVQQLA*PLRWHTLHTPT Trigger: TGTGGGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS GCA 72 bp | TCCTCCATTTTTACTGGTGAGCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCATACCCTCCATACTCC | + |
Preference number: 6 (lower is better) Translates to: SSIFTGEPSSAT*LTPSLAYPPYS Trigger: GGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS GCA 72 bp | AGCTGCAGGCCGACCATGGGGACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCATCTTCATCTTTCTCTT | + |
Preference number: 6 (lower is better) Translates to: SCRPTMGTSWSR*RFQGCHLHLSL Trigger: AAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | TCTTCTGGAGCCAGGTCGGCTACAATATCGTCCACGTaGTCAGGTACAATGTTGCACTGTTCTCCCTTCCGG | + |
Preference number: 6 (lower is better) Translates to: SSGARSATISST*SGTMLHCSPFR Trigger: CCGGAAGGGAGAACAGTGCAACATTGTACCTGACAACGTGGACGATATTGTAGCCGACCTGGCTCCAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | GGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGTGACCTTTCCCACATG | + |
Preference number: 6 (lower is better) Translates to: GRVHPQTEVPFG*SGFESCDLSHM Trigger: CATGTGGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 90 bp | CAGTCTCTGGGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGTGACCTTTCCCACATGACTTGTTAC | + |
Preference number: 6 (lower is better) Translates to: QSLGRVHPQTEVPFG*SGFESCDLSHMTCY Trigger: GTAACAAGTCATGTGGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | ATGACTTGTTACATTCAGACCACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGCATTCTGGCAGCATGC | + |
Preference number: 6 (lower is better) Translates to: MTCYIQTTGTTR*VHSQWGILAAC Trigger: GCATGCTGCCAGAATGCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | GATTGTCCGGGTTCGAATCATGTGACCTTTCCCACATaGCTTGTTACATTCAGACCACTGGGACCACTCGCT | + |
Preference number: 6 (lower is better) Translates to: DCPGSNHVTFPT*LVTFRPLGPLA Trigger: AGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCATGTGGGAAAGGTCACATGATTCGAACCCGGACAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CAA 72 bp | TCGGCTACAATATCGTCCACGTTGTCAGGTACAATGTaGCACTGTTCTCCCTTCCGGGCAATTCTCTCGATG | + |
Preference number: 6 (lower is better) Translates to: SATISSTLSGTM*HCSPFRAILSM Trigger: CATCGAGAGAATTGCCCGGAAGGGAGAACAGTGCAACATTGTACCTGACAACGTGGACGATATTGTAGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS CCA 72 bp | CCCCATCAAGTGTGGGATCCTGTTCACACAGCTTCTTaGTCAGGGAGCCCTCGTCTTGAAAATAAATTATGC | + |
Preference number: 6 (lower is better) Translates to: PHQVWDPVHTAS*SGSPRLENKLC Trigger: GCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAGGATCCCACACTTGATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS TCA 72 bp | ACTCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCT | + |
Preference number: 6 (lower is better) Translates to: TLLSNFFLHFYW*AQFSNLLDPFA Trigger: AGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046687.16 |
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CDS TCA 72 bp | TACCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCT | + |
Preference number: 6 (lower is better) Translates to: YLLSNFFLHFYW*AQFSNLLDPFA Trigger: AGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084696.6 |
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CDS CAA 72 bp | CTGTTCACACAGCTTCTTGGTCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTTCTGTACAATGCTGGC | + |
Preference number: 6 (lower is better) Translates to: LFTQLLGQGALV*KINYAFLYNAG Trigger: GCCAGCATTGTACAGAAACGCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |
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CDS GCA 72 bp | CCTCGTCTTGAAAATAAATTATGCGTTTCTGTACAATaGTGGCCTTCAGAATCACACAGCCTGTCCCTGTTG | + |
Preference number: 6 (lower is better) Translates to: PRLENKLCVSVQ*WPSESHSLSLL Trigger: CAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCATAATTTATTTTCAAGACGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046687.16 ENSMUST00000084696.6 |