RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPON1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038156

Ensembl transcript IDs: ENSMUST00000046687.16, ENSMUST00000084696.6

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAACAGCAGGACCCACCTGGGCCGGCTGTCACAGCTGCTCAGGTaGCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCT +
Preference number: 1 (lower is better)
Translates to: QNSRTHLGRLSQLLR*QPRFPGPHHYCPCP
Trigger: AGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCTGCTGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp CCTGGGCCGGCTGTCACAGCTGCTCAGGTGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACAT +
Preference number: 1 (lower is better)
Translates to: PGPAVTAAQVPTQIP*APPLLSLPFCPWIH
Trigger: ATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 90 bp GGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTaGTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACC +
Preference number: 1 (lower is better)
Translates to: GCVSCMLHSGTREHG*FSLWMWPGSSPCLT
Trigger: GGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp AATAGGGTGACTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTaGTGTCCAGATGGTAGGCTTCGGAGAAGCACTGTGTCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: NRVTSAACSPGLWAA*CPDGRLRRSTVSGL
Trigger: CAGACCTGACACAGTGCTTCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp TGGTGTCCAGATGGTAGGCTTCGGAGAAGCACTGTGTCAGGTCTGTaGTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATC +
Preference number: 1 (lower is better)
Translates to: WCPDGRLRRSTVSGL*SPPQSVEAFEQTPI
Trigger: GATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGCTTCTCCGAAGCCTACCATCTGGACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTaGTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGG +
Preference number: 1 (lower is better)
Translates to: ITELSWIFKALGGGW*CLLREALSGAGRKW
Trigger: CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp TGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTTGTaGATGTGGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATGTTC +
Preference number: 1 (lower is better)
Translates to: CMLHSGTREHGCFSL*MWPGSSPCLTRGMF
Trigger: GAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp CAGATTCAGTACAAAGGTGTGCACTACAAAGCAGTGAGGGGCAGGTaGAGTAGAGCTGGCTGCTGGGAGACCCACTCTCTGCGTGAGAAC +
Preference number: 1 (lower is better)
Translates to: QIQYKGVHYKAVRGR*SRAGCWETHSLREN
Trigger: GTTCTCACGCAGAGAGTGGGTCTCCCAGCAGCCAGCTCTACTCCACCTGCCCCTCACTGCTTTGTAGTGCACACCTTTGTACTGAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp TGGCAGGAAGTGGGATGGGGGTGCGGAGTTGGGCAGGTGCATAGGTaGGAAGTCGCTTATTCAATGTCATGGGGCCCATGCTGTGAAATT +
Preference number: 1 (lower is better)
Translates to: WQEVGWGCGVGQVHR*EVAYSMSWGPCCEI
Trigger: AATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTGCCCAACTCCGCACCCCCATCCCACTTCCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp CAAGGTGAGCCAACACTACTCACTCAGTGTAGGAAGAGGGCCACCTaGGGACAAGGATGCCCCACTTGGCCTGCACTCACCAAGAAGAAT +
Preference number: 1 (lower is better)
Translates to: QGEPTLLTQCRKRAT*GQGCPTWPALTKKN
Trigger: ATTCTTCTTGGTGAGTGCAGGCCAAGTGGGGCATCCTTGTCCTCAGGTGGCCCTCTTCCTACACTGAGTGAGTAGTGTTGGCTCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 90 bp ATGGTTGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTaGCCAGGGGGATGTTCCAGAGGGACACAAGGTGAGCCAACACTA +
Preference number: 1 (lower is better)
Translates to: MVAFPCGCGQGLHPA*PGGCSRGTQGEPTL
Trigger: TAGTGTTGGCTCACCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 90 bp GGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAGTGTCCTGCACTGTaGAATAGCCACACCCTAAACACAGCCTGCCCTTTCCTTGCCCCA +
Preference number: 1 (lower is better)
Translates to: GWKKRRTVASQCPAL*NSHTLNTACPFLAP
Trigger: TGGGGCAAGGAAAGGGCAGGCTGTGTTTAGGGTGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp ACTGTGGTCTACAAAGATCCCTCAGGGCATCATGAAGGAATAGGGTaGCTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTC +
Preference number: 1 (lower is better)
Translates to: TVVYKDPSGHHEGIG*LQLHAVQDCGQPGV
Trigger: GACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTAGACCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp CTCAGGTGCCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTaGCCTTCTGTCCCTGGATACATGCATTGGATACATACATCGCCT +
Preference number: 1 (lower is better)
Translates to: LRCQPRFPGPHHYCP*PSVPGYMHWIHTSP
Trigger: AGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp CCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTaGATACATACATCGCCTCTGAGCCCATGGGGGTTCGAAAGCAGG +
Preference number: 1 (lower is better)
Translates to: PHHYCPCPSVPGYMH*IHTSPLSPWGFESR
Trigger: CCTGCTTTCGAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp CTGAAGAGTTATGTCTCTTGTGAGGCATGGCAGAGTAGGAGAAACTaGGCAATTGGAAGGCTGGCGCTGTGGGCTGGAGTTGGAGTTCAG +
Preference number: 1 (lower is better)
Translates to: LKSYVSCEAWQSRRN*AIGRLALWAGVGVQ
Trigger: CTGAACTCCAACTCCAGCCCACAGCGCCAGCCTTCCAATTGCCCAGTTTCTCCTACTCTGCCATGCCTCACAAGAGACATAACTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp GTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTaGTTGCAGGCAGACCTTGCAAAGAAAGCACAGCACAGAGTCTTT +
Preference number: 1 (lower is better)
Translates to: VSRVQKASKKVCPFC*LQADLAKKAQHRVF
Trigger: AAAGACTCTGTGCTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp CAACATCACAGGAGCACCATACATATGGGGCTTCCTCCATCATCTTaGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAGT +
Preference number: 1 (lower is better)
Translates to: QHHRSTIHMGLPPSS*EMQGGRKEGQWPLS
Trigger: ACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTGTGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp GGAGTTGGGCAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATaGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTTGAAACTC +
Preference number: 1 (lower is better)
Translates to: GVGQVHRWEVAYSMS*GPCCEIHSIAILKL
Trigger: GAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTGCCCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp CTGAACAGTAAATCCCTCAAGGCATGTAAATTAAGGATCAGCAAATaGGGCTGGAACAGTGGACCAGTGGGTAAAGTGCCTGCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: LNSKSLKACKLRISK*GWNSGPVGKVPASG
Trigger: CCCTGAAGCAGGCACTTTACCCACTGGTCCACTGTTCCAGCCCCATTTGCTGATCCTTAATTTACATGCCTTGAGGGATTTACTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp CAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATGGGGCCCATaGTGTGAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGAT +
Preference number: 1 (lower is better)
Translates to: QVHRWEVAYSMSWGP*CEIHSIAILKLSSD
Trigger: ATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp CACAGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATGGGGGTaGCGCTGGGGCATGTCTGCTTGGAGCTCTATAATTTATACACTA +
Preference number: 1 (lower is better)
Translates to: HSIAILKLSSDLEWG*RWGMSAWSSIIYTL
Trigger: TAGTGTATAAATTATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 90 bp TATGAAACCCTAAATCACAGTTTCTGTCTCAGGAGACCTGAGGTCTaGCTTTCCAACAACAAGCCTACAGCAGGGTTTAGCATACCAAAG +
Preference number: 1 (lower is better)
Translates to: YETLNHSFCLRRPEV*LSNNKPTAGFSIPK
Trigger: CTTTGGTATGCTAAACCCTGCTGTAGGCTTGTTGTTGGAAAGGCAGACCTCAGGTCTCCTGAGACAGAAACTGTGATTTAGGGTTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp GGATGTTGCAAAGTAGGCGGGACAGATCCTTTAGCAGAGCATTTATaGGGAGGGTGGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACT +
Preference number: 1 (lower is better)
Translates to: GCCKVGGTDPLAEHL*GGWKSKPLISLFCT
Trigger: AGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCCGCCTACTTTGCAACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp GAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATaGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCTATAATTTAT +
Preference number: 1 (lower is better)
Translates to: EIHSIAILKLSSDLE*GWRWGMSAWSSIIY
Trigger: ATAAATTATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp AAAGTAGGCGGGACAGATCCTTTAGCAGAGCATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACTCCTTTGAAG +
Preference number: 1 (lower is better)
Translates to: KVGGTDPLAEHLWGG*KSKPLISLFCTPLK
Trigger: CTTCAAAGGAGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCCGCCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp AGGGCTGAGGACAGAGAATTTGTTGAAGTTTTCAAACAAGTCCTCTaGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTC +
Preference number: 1 (lower is better)
Translates to: RAEDREFVEVFKQVL*LCRGHISILGRPVF
Trigger: GAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTCTCTGTCCTCAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp CATTCTGTCTACTTTGGGCAATATGAACAAGAAGAATGGGGATATTaGAATCGACCTTGCCAAGTAGCAACATGGTGGAAATGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: HSVYFGQYEQEEWGY*NRPCQVATWWKWLA
Trigger: AGCCAGCCATTTCCACCATGTTGCTACTTGGCAAGGTCGATTTCAATATCCCCATTCTTCTTGTTCATATTGCCCAAAGTAGACAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 90 bp GAGGACAGAGAATTTGTTGAAGTTTTCAAACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTC +
Preference number: 1 (lower is better)
Translates to: EDREFVEVFKQVLWL*RGHISILGRPVFLL
Trigger: GAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTCTCTGTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 90 bp AGTGTAGTGTGTGTGTGTGTGTGTATACACTCCACAGCACACATATaGAAATTAGAGGACAACGTTACGGAGTTGTGTCTTAGTGTTTCT +
Preference number: 1 (lower is better)
Translates to: SVVCVCVCIHSTAHI*KLEDNVTELCLSVS
Trigger: AGAAACACTAAGACACAACTCCGTAACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGAGTGTATACACACACACACACACACTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp ACATTTAGACTTCAAATCAAATGGAGGAGAAACATAAGCTCATTCTaGAGATGTTCTCACACTGTGGTCTACAAAGATCCCTCAGGGCAT +
Preference number: 1 (lower is better)
Translates to: TFRLQIKWRRNISSF*RCSHTVVYKDPSGH
Trigger: ATGCCCTGAGGGATCTTTGTAGACCACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGAAGTCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp CTAGGAAGACCCGTCTTCTTGCTCCTTTTTATGTTGCTTCCTCCTTaGCTTATAGAAAAATATAAGTTGTGTGCTTTCAGGGAAGGATAT +
Preference number: 1 (lower is better)
Translates to: LGRPVFLLLFMLLPP*LIEKYKLCAFREGY
Trigger: ATATCCTTCCCTGAAAGCACACAACTTATATTTTTCTATAAGTCAAGGAGGAAGCAACATAAAAAGGAGCAAGAAGACGGGTCTTCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 90 bp AAATTGACTCAATATCTGATTGGGAAACATCTTACAATGTGGGTTTaGCCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAC +
Preference number: 1 (lower is better)
Translates to: KLTQYLIGKHLTMWV*PDYSWFGVGVKYIY
Trigger: GTATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGAGTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 90 bp GATCTTGAATTTATTTTGCCGGCTTCATTATTTCTTTGTAACAAATaGTTTTCAGTATCCCATTCCTCAGAGCTGGACAATCACAATTTC +
Preference number: 1 (lower is better)
Translates to: DLEFILPASLFLCNK*FSVSHSSELDNHNF
Trigger: GAAATTGTGATTGTCCAGCTCTGAGGAATGGGATACTGAAAACCATTTGTTACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGGCTGTGTCTCCTGCATaGTGCATTCTGGCACCCGAG +
Preference number: 2 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGAVSPA*CILAPE
Trigger: CTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGC...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCC +
Preference number: 2 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGPTQIP*APPLLS
Trigger: GGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCTCTGGACTGTCCATaGAAACCAGGGCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGPLDCP*KPGPWS
Trigger: GGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGATGGGGCCCATGCTGTaGAATTCACAGCATTGCCAT +
Preference number: 2 (lower is better)
Translates to: GGWCCLLREALSGAGRKWMGPML*NSQHCH
Trigger: ATGGCAATGCTGTGAATTTCACAGCATGGGCCCCAT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp TCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATG +
Preference number: 2 (lower is better)
Translates to: SCMLHSGTREHGCFS*WMWPGSSPCLTRGM
Trigger: CATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGATGTTCTCACACTGTaGTCTACAAAGATCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GGWCCLLREALSGAGRKWDVLTL*STKIPQ
Trigger: CTGAGGGATCTTTGTAGACCACAGTGTGAGAACATC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp TGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTaGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: WLCLLHAAFWHPRTW*LFLVDVARVFTLLD
Trigger: GTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp GCTCAGGTGCCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTaGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATCGCC +
Preference number: 2 (lower is better)
Translates to: AQVPTQIPWAPPLLS*PFCPWIHALDTYIA
Trigger: GGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAACAATAGACGGGTTGTaGTGGGTTTCCAGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGTIDGL*WVSRVQ
Trigger: CTGCACTCTGGAAACCCATCACAACCCGTCTATTGT...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGGACAGGCTGTCCCTTaGCATCATAAGACTATTGGG +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGGQAVP*HHKTIG
Trigger: CCCAATAGTCTTATGATGCCAAGGGACAGCCTGTCC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp GCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATaGGATACATACATCGCCTCTGAGCCCATGGGGGTTCGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: APPLLSLPFCPWIHA*DTYIASEPMGVRKQ
Trigger: CTGCTTTCGAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp TTCGGAGAAGCACTGTGTCAGGTCTGTGCTCACCCCCTCAGTCTGTaGAGGCCTTTGAGCAAACACCCATCACAACATCACAGGAGCACC +
Preference number: 2 (lower is better)
Translates to: FGEALCQVCAHPLSL*RPLSKHPSQHHRST
Trigger: GGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGCTTCTCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTAGATGGTATTTTTGTTaGGGATTGACTTGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPRWYFC*GLTWWL
Trigger: GAGCCACCAAGTCAATCCTCAACAAAAATACCATCT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGTTGGCAGGAAAGATTTaGCATTCACAATCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGLAGKI*HSQSPH
Trigger: ATGGGGAGATTGTGAATGTCAAATCTTTCCTGCCAA...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACAAGTAGCAACATGGTaGAAATGGCTGGCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGQVATW*KWLASL
Trigger: CAAGGAAGCCAGCCATTTCCACCATGTTGCTACTTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp GACACTTGTGATCCCAGGACTGGGGAGACAGAGACAGGAGGAAACTaGGAGCTCACTGGCCAGTTGGCTGAGCAAAATTGGTGTGTCCTA +
Preference number: 2 (lower is better)
Translates to: DTCDPRTGETETGGN*ELTGQLAEQNWCVL
Trigger: TAGGACACACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGATCACAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGTGTCTCCTGCATGCTaGATTCTGGCACCCGAGAAC +
Preference number: 2 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLVSPAC*ILAPEN
Trigger: GTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACAC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTGCAGTCCAGGACTGTaGGCAGCCTGGTGTCCAGAT +
Preference number: 2 (lower is better)
Translates to: HSFPIIKLISRKLGQLGWCSPGL*AAWCPD
Trigger: ATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGGGCAATTGGAAGGCTaGCGCTGTGGGCTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: EITELSWIFKALGGGWCCGQLEG*RCGLEL
Trigger: CAACTCCAGCCCACAGCGCCAGCCTTCCAATTGCCC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGACTTGCATATTAACATaGGCTTTCCAGAATTGGATG +
Preference number: 2 (lower is better)
Translates to: GGWCCLLREALSGAGRKWTCILT*AFQNWM
Trigger: CATCCAATTCTGGAAAGCCCATGTTAATATGCAAGT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTTGGCAGGAAGTGGGATaGGGGTGCGGAGTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: WLCRGHISILGRPVFLLLWQEVG*GCGVGQ
Trigger: CTGCCCAACTCCGCACCCCCATCCCACTTCCTGCCA...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp GCACTGTGTCAGGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTaGAGCAAACACCCATCACAACATCACAGGAGCACCATACATATG +
Preference number: 2 (lower is better)
Translates to: ALCQVCAHPLSLLRP*SKHPSQHHRSTIHM
Trigger: CATATGTATGGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTGACACAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCAAGCCTGCCCTTTCCTTaGCCCAGAACAGCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: WAFQNWMQGGLMREIQYPSLPFP*PRTAGV
Trigger: GACCCCAGCTGTTCTGGGGCAAGGAAAGGGCAGGCT...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTCCCCCGACTTTCCTCTaGACTGTCCATGAAAACCAG +
Preference number: 2 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLPPTFL*TVHENQ
Trigger: CTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGAGAAACTGGGCAATTaGAAGGCTGGCGCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: EITELSWIFKALGGGWCCEKLGN*KAGAVG
Trigger: GCCCACAGCGCCAGCCTTCCAATTGCCCAGTTTCTC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp ACAACATCACAGGAGCACCATACATATGGGGCTTCCTCCATCATCTaGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGGCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: TTSQEHHTYGASSII*GDAGWKKRRTVASQ
Trigger: CTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTGTGATGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTACTTTGGGCAATATaGACAAGAAGAATGGGGATA +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGLLWAI*TRRMGI
Trigger: TATCCCCATTCTTCTTGTTCATATTGCCCAAAGTAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGATGGTGCTGCCTGCTaGGGGAGGCTCTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: FQTSPLAMQRTHFYSRKTDGAAC*GRLCQE
Trigger: CTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGCTGCTAGCGAAGCCTaGCACCATCTGAAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: PTITVLALLSLDTCIGYIAASEA*HHLKEL
Trigger: AAGCTCCTTCAGATGGTGGCAGGCTTCGCTAGCAGC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR GCA 90 bp GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGAAAGACCCTTCTTCTCTaGCTCTATTTGCTATTAACT +
Preference number: 2 (lower is better)
Translates to: ACSPGLWAAWCPDGRLRRKTLLL*LYLLLT
Trigger: AGTTAATAGCAAATAGAGGCAGAGAAGAAGGGTCTT...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAAAAATTATACCCAAGTaGGACTGGGTGAAAACCCAA +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGKIIPK*DWVKTQ
Trigger: TTGGGTTTTCACCCAGTCCCACTTGGGTATAATTTT...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGGACTGTGGGCAGCCTaGTGTCCAGATGGTAGGCTT +
Preference number: 2 (lower is better)
Translates to: LTMKTQVISNSQAPMATRGLWAA*CPDGRL
Trigger: AAGCCTACCATCTGGACACCAGGCTGCCCACAGTCC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGGAGCTGGCAGGAAGTaGGATGGGGGTGCGGAGTTG +
Preference number: 2 (lower is better)
Translates to: FQTSPLAMQRTHFYSRKTGAGRK*DGGAEL
Trigger: CAACTCCGCACCCCCATCCCACTTCCTGCCAGCTCC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTATTTTTGTTGAGGATTaGCTTGGTGGCTCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLIFVED*LGGSLA
Trigger: GGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAAT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAACAGCTGGGGTCACTaGGACATGGCTGCTTGGGTA +
Preference number: 2 (lower is better)
Translates to: LTMKTQVISNSQAPMATRNSWGH*DMAAWV
Trigger: TACCCAAGCAGCCATGTCTCAGTGACCCCAGCTGTT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTAACTCAAGGCTTTTaGCAGGAAAGATTTGACATT +
Preference number: 2 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGLTQGF*QERFDI
Trigger: AATGTCAAATCTTTCCTGCCAAAAGCCTTGAGTTAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp TGCTGTGAAATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTaGGAATGGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCTATA +
Preference number: 2 (lower is better)
Translates to: CCEIHSIAILKLSSD*EWGWRWGMSAWSSI
Trigger: TATAGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGAGGAAGAGGGCCACCTaGGGACAAGGATGCCCCACT +
Preference number: 2 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMRKRAT*GQGCPT
Trigger: AGTGGGGCATCCTTGTCCTCAGGTGGCCCTCTTCCT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAGGCTTCTGTGGGAATaGCAGCTAAAGCCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: LTMKTQVISNSQAPMATRRLLWE*QLKPGH
Trigger: ATGGCCTGGCTTTAGCTGTCATTCCCACAGAAGCCT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCCAGGGTCTTCACCCTaGTTGACCAGGGGGATGTTC +
Preference number: 2 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRPGSSP*LTRGMF
Trigger: GAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR GCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGCCCGTTCTGCTGCTTaGAGGCAGACCTTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRARSAA*RQTLQR
Trigger: TCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGCTTTAACAGATGCATaGGTAAAACCTGCTAATGAG +
Preference number: 2 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLALTDA*VKPANE
Trigger: CTCATTAGCAGGTTTTACTCATGCATCTGTTAAAGC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCATATCAGAAAGCATGGTaGCATGCAGGCAGACATGGT +
Preference number: 2 (lower is better)
Translates to: WAFQNWMQGGLMREIQYPYQKAW*HAGRHG
Trigger: ACCATGTCTGCCTGCATGTCACCATGCTTTCTGATA...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGATGGCTGTGTCTCCTaGATGCTGCATTCTGGCACC +
Preference number: 2 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMDGCVS*MLHSGT
Trigger: GGTGCCAGAATGCAGCATGCAGGAGACACAGCCATC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATT +
Preference number: 2 (lower is better)
Translates to: PTITVLALLSLDTCIGYIHLWGG*KSKPLI
Trigger: AATGAGAGGCTTGGATTTCCACCCTCCCCATAAATG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGCTGTGGGCTGGAGTTaGAGTTCAGTTAACAGCATA +
Preference number: 2 (lower is better)
Translates to: LTMKTQVISNSQAPMATRAVGWS*SSVNSI
Trigger: TATGCTGTTAACTGAACTCCAACTCCAGCCCACAGC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATCAGAGTAGGAGAAACTaGGCAATTGGAAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: TSTVRRTLLILNLFCRLHQSRRN*AIGRLA
Trigger: CGCCAGCCTTCCAATTGCCCAGTTTCTCCTACTCTG...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATACAAAGGGTCCCCAGTaGCAAGCCAGACACACTAGT +
Preference number: 2 (lower is better)
Translates to: TSTVRRTLLILNLFCRLHTKGPQ*QARHTS
Trigger: ACTAGTGTGTCTGGCTTGCCACTGGGGACCCTTTGT...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGTCTGTCCTCTGCATTTaGTGGCTGTGTCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRSVLCI*WLCLLH
Trigger: ATGCAGGAGACACAGCCATCAAATGCAGAGGACAGA...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR GCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGCTCAGAGAAGGATCTaGCGAGAAAAGGTTAGTGCG +
Preference number: 2 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRAQRRI*REKVSA
Trigger: CGCACTAACCTTTTCTCGGCAGATCCTTCTCTGAGC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGGTTGCTTTTCCTTGTaGATGTGGCCAGGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRGCFSL*MWPGSS
Trigger: TGAAGACCCTGGCCACATCCACAAGGAAAAGCAACC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGGTGTTCAGGCTTGTGTaGCAGGTGCCTTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: QFGDFVHHCHIRKHGDMQVFRLV*QVPLSA
Trigger: AGCAGATAAAGGCACCTGCCACACAAGCCTGAACAC...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTCCACAGCACACATATaGAAATTAGAGGACAACGTT +
Preference number: 2 (lower is better)
Translates to: HSFPIIKLISRKLGQLGWSTAHI*KLEDNV
Trigger: AACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGCTGGACATATTCTaGTATGTTGAATGGAGATTC +
Preference number: 2 (lower is better)
Translates to: PTITVLALLSLDTCIGYIWLDIF*YVEWRF
Trigger: GAATCTCCATTCAACATATCAGAATATGTCCAGCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCGACTTGGCTGTAGCCTaGAGAGTTATGTCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: FQTSPLAMQRTHFYSRKTDLAVA*RVMSLV
Trigger: CACAAGAGACATAACTCTTCAGGCTACAGCCAAGTC...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTGTTAAGGTCACAGCATaGACACATTTTCTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: WLCRGHISILGRPVFLLLVKVTA*THFLKW
Trigger: CCACTTCAGAAAATGTGTGCATGCTGTGACCTTAAC...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR TCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAACTAGTGGACACAATTaGAATCATCTTACACAAGCA +
Preference number: 2 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKTSGHN*NHLTQA
Trigger: TGCTTGTGTAAGATGATTTCAATTGTGTCCACTAGT...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATATTTTCCTTGTGGATGTaGCCAGGGTCTTCACCCTGC +
Preference number: 2 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIFSLWM*PGSSPC
Trigger: GCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAA...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 90 bp CACTCCACAGCACACATATGGAAATTAGAGGACAACGTTACGGAGTaGTGTCTTAGTGTTTCTATTGCTATGAAGAAACACCATGACCAC +
Preference number: 2 (lower is better)
Translates to: HSTAHIWKLEDNVTE*CLSVSIAMKKHHDH
Trigger: GTGGTCATGGTGTTTCTTCATAGCAATAGAAACACTAAGACACAACTCCGTAACGTTGTCCTCTAATTTCCATATGTGTGCTGTGGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGTAGCCATCATCACCTaGTACCCTTGTGGTGTCAAC +
Preference number: 2 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIVAIIT*YPCGVN
Trigger: GTTGACACCACAAGGGTAGCAGGTGATGATGGCTAC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR TCA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGACATCCTCTTACTCTTaGCTGTTGGTTCTTAGACTC +
Preference number: 2 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMTSSYS*LLVLRL
Trigger: GAGTCTAAGAACCAACAGTCAAGAGTAAGAGGATGT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTACTCAACGGAAATCATaGCTCACAAATAAAGTAGCC +
Preference number: 2 (lower is better)
Translates to: KPANELTAEINILLLLTVTQRKS*LTNKVA
Trigger: GGCTACTTTATTTGTGAGCCATGATTTCCGTTGAGT...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CCA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTAGACTTCAAATCAAATaGAGGAGAAACATAAGCTCA +
Preference number: 2 (lower is better)
Translates to: WLCRGHISILGRPVFLLLRLQIK*RRNISS
Trigger: TGAGCTTATGTTTCTCCTCCATTTGATTTGAAGTCT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACACACATTTTCTGAAGTaGGGTATTCTAAGGCGGAAG +
Preference number: 2 (lower is better)
Translates to: EPDKLGLKVLRNLRTLTDTHFLK*GILRRK
Trigger: CTTCCGCCTTAGAATACCCCACTTCAGAAAATGTGT...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGCACTGTGTGCATCTTaGCCACAGTATGTATTTGGA +
Preference number: 2 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIALCAS*PQYVFG
Trigger: TCCAAATACATACTGTGGGCAAGATGCACACAGTGC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR GCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGTAGCTTCAGTAGATTaGCCTCTGATAAAACACATT +
Preference number: 2 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRVASVD*PLIKHI
Trigger: AATGTGTTTTATCAGAGGGCAATCTACTGAAGCTAC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR GCA 90 bp GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACCAGTTAACAGCATACTaGCCTAACTTACACAAAGTC +
Preference number: 2 (lower is better)
Translates to: EPDKLGLKVLRNLRTLTDQLTAY*PNLHKV
Trigger: GACTTTGTGTAAGTTAGGGCAGTATGCTGTTAACTG...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp TCAAATCAAATGGAGGAGAAACATAAGCTCATTCTGAAGATGTTCTCACACTGTCATTGTCAAGAAGAGTaGGTCATTTCACTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SNQMEEKHKLILKMFSHCHCQEE*VISLAL
Trigger: GAGGGCAAGTGAAATGACCCACTCTTCTTGACAATG...ACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp AAGGCAGTAAGCAAGACCAGCACTGTTAGGAGGACACTCTTGATCTaGAATTTATTTTGCCGGCTTCATTATTTCTTTGTAACAAATGGT +
Preference number: 2 (lower is better)
Translates to: KAVSKTSTVRRTLLI*NLFCRLHYFFVTNG
Trigger: ACCATTTGTTACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCTTACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACCCTTATGGTAGAACTTaGATATTAACATGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: EPDKLGLKVLRNLRTLTDPYGRT*ILTWAF
Trigger: GAAAGCCCATGTTAATATGCAAGTTCTACCATAAGG...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR GCA 90 bp CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATT +
Preference number: 2 (lower is better)
Translates to: QAYIPHTTNQLENFLRNTQVLWL*RGHISI
Trigger: AATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTG...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CCA 90 bp CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACATTTATGTATAGGCTTTaGAGCCAGACAAACTTGGGC +
Preference number: 2 (lower is better)
Translates to: QAYIPHTTNQLENFLRNTFMYRL*SQTNLG
Trigger: GCCCAAGTTTGTCTGGCTCCAAAGCCTATACATAAA...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 90 bp GAAATTGACTCAATATCTGATTGGGAAACATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATA +
Preference number: 2 (lower is better)
Translates to: EIDSISDWETSYNVG*TRLQLVWGWCKIYI
Trigger: TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGAGTCAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp AGGACCCACCTGGGCCGGCTGTCACAGCTGCTCAGGTaGCAACCCAGATTCCCTGGGCCCCACCATTACTGT +
Preference number: 3 (lower is better)
Translates to: RTHLGRLSQLLR*QPRFPGPHHYC
Trigger: ACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTaGGCCGGCTGTCACAGCTGCTCAGGTGCCAACCCA +
Preference number: 3 (lower is better)
Translates to: EVSPDTRTAGPT*AGCHSCSGANP
Trigger: TGGGTTGGCACCTGAGCAGCTGTGACAGCCGGCCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GCTGTCACAGCTGCTCAGGTGCCAACCCAGATTCCCTaGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: AVTAAQVPTQIP*APPLLSLPFCP
Trigger: GGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGGCACCTGAGCAGCTGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp CTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTaGTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LSWIFKALGGGW*CLLREALSGAG
Trigger: GCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTTTGTTGAGGATTGACTaGGTGGCTCTCTGGCCGACT +
Preference number: 3 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPLLRID*VALWPT
Trigger: AGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAA...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GGCACCCGAGAACATGGTTGCTTTTCCTTGTGGATGTaGCCAGGGTCTTCACCCTGCTTGACCAGGGGGATG +
Preference number: 3 (lower is better)
Translates to: GTREHGCFSLWM*PGSSPCLTRGM
Trigger: CATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp TTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTGCTTaGCCAGGGGGATGTTCCAGAGGGACACAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: FPCGCGQGLHPA*PGGCSRGTQGE
Trigger: CTCACCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp CGCCACCCCTACCTTAGAGCTCCTCCTTCAGGGCACTaGAGAACCCGTGACCCTGGAGACTTACCAAGATAC +
Preference number: 3 (lower is better)
Translates to: RHPYLRAPPSGH*RTRDPGDLPRY
Trigger: GTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAGCTCTAAGGTAGGGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp TGCTTTTCCTTGTGGATGTGGCCAGGGTCTTCACCCTaGTTGACCAGGGGGATGTTCCAGAGGGACACAAGG +
Preference number: 3 (lower is better)
Translates to: CFSLWMWPGSSP*LTRGMFQRDTR
Trigger: CCTTGTGTCCCTCTGGAACATCCCCCTGGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp AAAGCAGTGAGGGGCAGGTGGAGTAGAGCTGGCTGCTaGGAGACCCACTCTCTGCGTGAGAACTTGGTAAAC +
Preference number: 3 (lower is better)
Translates to: KAVRGRWSRAGC*ETHSLRENLVN
Trigger: GTTTACCAAGTTCTCACGCAGAGAGTGGGTCTCCCAGCAGCCAGCTCTACTCCACCTGCCCCTCACTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCGCTGGGCCAGCTGGGTaGGACAGACTCCCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: EITELSWIFKALGGGWCCAGPAG*DRLPAA
Trigger: TGCTGCAGGGAGTCTGTCCAACCCAGCTGGCCCAGC...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp GTTCCACACATGGACGCTGGTCCTGGTAGACACTTGTaGTCCCAGGACTGGGGAGACAGAGACAGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: VPHMDAGPGRHL*SQDWGDRDRRK
Trigger: TTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGATCACAAGTGTCTACCAGGACCAGCGTCCATGTGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAACAAGGATGCCCCACTaGGCCTGCACTCACCAAGAA +
Preference number: 3 (lower is better)
Translates to: SSAFDGCVSCMLHSGTRETRMPH*ACTHQE
Trigger: TTCTTGGTGAGTGCAGGCCAAGTGGGGCATCCTTGT...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp GCCGCAGATGAGAGAGGAGAATCTGTCCTCTGCATTTaGTGGCTGTGTCTCCTGCATGCTGCATTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: AADERGESVLCI*WLCLLHAAFWH
Trigger: GTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGATTCTCCTCTCTCATCTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp TGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATaGTTGCTTTTCCTTGTGGATGTGGCCAGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: CLLHAAFWHPRT*LLFLVDVARVF
Trigger: GAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp ATCCCAGGACTGGGGAGACAGAGACAGGAGGAAACTTaGAGCTCACTGGCCAGTTGGCTGAGCAAAATTGGT +
Preference number: 3 (lower is better)
Translates to: IPGLGRQRQEET*SSLASWLSKIG
Trigger: ACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGTCTCCCCAGTCCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACAAACCACCCAACCATaGGTGACTAGAATCTGGAAT +
Preference number: 3 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGQTTQP*VTRIWN
Trigger: ATTCCAGATTCTAGTCACCAATGGTTGGGTGGTTTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTCAGCCTGCCCTTTCCTaGCCCCAGAACAGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: WLCRGHISILGRPVFLLLQPALS*PQNSWG
Trigger: ACCCCAGCTGTTCTGGGGCAAGGAAAGGGCAGGCTG...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp TACAAAGATCCCTCAGGGCATCATGAAGGAATAGGGTaGCTTCAGCTGCATGCAGTCCAGGACTGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: YKDPSGHHEGIG*LQLHAVQDCGQ
Trigger: CTGCCCACAGTCCTGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp GAGAATCTGTCCTCTGCATTTGATGGCTGTGTCTCCTaGATGCTGCATTCTGGCACCCGAGAACATGGTTGC +
Preference number: 3 (lower is better)
Translates to: ENLSSAFDGCVS*MLHSGTREHGC
Trigger: GCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp AGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTaGTGCTTGCAGGCAGACCTTGCAAAGAAAGCACAG +
Preference number: 3 (lower is better)
Translates to: RVQKASKKVCPF*CLQADLAKKAQ
Trigger: CTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTaGCCTTCTGTCCCTGGATACATGCATTGGATACAT +
Preference number: 3 (lower is better)
Translates to: QPRFPGPHHYCP*PSVPGYMHWIH
Trigger: ATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp CAGACTCCCTGCAGCAGGCTGGTTAAGGTCACAGCATaGACACATTTTCTGAAGTGGGGTATTCTAAGGCGG +
Preference number: 3 (lower is better)
Translates to: QTPCSRLVKVTA*THFLKWGILRR
Trigger: CCGCCTTAGAATACCCCACTTCAGAAAATGTGTGCATGCTGTGACCTTAACCAGCCTGCTGCAGGGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp TACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTaGATACATACATCGCCTCTGAGCCCATGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: YCPCPSVPGYMH*IHTSPLSPWGF
Trigger: GAACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp AGCATTGCCATCTTGAAACTCTCATCAGATTTGGAATaGGGGTGGCGCTGGGGCATGTCTGCTTGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: SIAILKLSSDLE*GWRWGMSAWSS
Trigger: AGAGCTCCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGSYNVG*TRLQLV
Trigger: AACCAGCTGTAATCTGGTCAAACCCACATTGTAAGA...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTCACCCGAGAACATGGTaGCTTTTCCTTGTGGATGTG +
Preference number: 3 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLHPRTW*LFLVDV
Trigger: CACATCCACAAGGAAAAGCAACCATGTTCTCGGGTG...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCCTTACTTGTAGGTTaGTATCTTAGTCATGGGAAT +
Preference number: 3 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGPLLVG*YLSHGN
Trigger: ATTCCCATGACTAAGATACAAACCTACAAGTAAGGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp AAAAGAAGGACAGTGGCCTCTCAGTGTCCTGCACTGTaGAATAGCCACACCCTAAACACAGCCTGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: KRRTVASQCPAL*NSHTLNTACPF
Trigger: GAAAGGGCAGGCTGTGTTTAGGGTGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp GGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTTaGAACTCTCATCAGATTTGGAATGGGGGTGGCGCT +
Preference number: 3 (lower is better)
Translates to: GAHAVKFTALPS*NSHQIWNGGGA
Trigger: AGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp GCAAATGGGGCTGGAACAGTGGACCAGTGGGTAAAGTaGCTGCTTCAGGGACATGTGGACTTTGAACTTGAT +
Preference number: 3 (lower is better)
Translates to: ANGAGTVDQWVK*LLQGHVDFELD
Trigger: ATCAAGTTCAAAGTCCACATGTCCCTGAAGCAGGCACTTTACCCACTGGTCCACTGTTCCAGCCCCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp TCTTGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTaGCCTCTCAGTGTCCTGCACTGTGAAATAGCCACA +
Preference number: 3 (lower is better)
Translates to: SWEMQGGRKEGQ*PLSVLHCEIAT
Trigger: TGTGGCTATTTCACAGTGCAGGACACTGAGAGGCCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp AGGAGCACCATACATATGGGGCTTCCTCCATCATCTTaGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTGG +
Preference number: 3 (lower is better)
Translates to: RSTIHMGLPPSS*EMQGGRKEGQW
Trigger: CCACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKHGCFS*WMWPGS
Trigger: AGACCCTGGCCACATCCACAAGGAAAAGCAACCATG...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAGCACTGTGTGCATCTaGCCCACAGTATGTATTTGG +
Preference number: 3 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLSTVCI*PTVCIW
Trigger: CCAAATACATACTGTGGGCAAGATGCACACAGTGCT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp GGTAGTCTTCTTGTACCAGAGAGGCTTCTGTGGGAATaGCAGCTAAAGCCAGGCCATCGTATCTCCATAGCA +
Preference number: 3 (lower is better)
Translates to: GSLLVPERLLWE*QLKPGHRISIA
Trigger: TGCTATGGAGATACGATGGCCTGGCTTTAGCTGTCATTCCCACAGAAGCCTCTCTGGTACAAGAAGACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp TCACACTGTGGTCTACAAAGATCCCTCAGGGCATCATaGAGGAATAGGGTGACTTCAGCTGCATGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: SHCGLQRSLRAS*RNRVTSAACSP
Trigger: TGGACTGCATGCAGCTGAAGTCACCCTATTCCTTCATGATGCCCTGAGGGATCTTTGTAGACCACAGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp ATCTGTCCTCTGCATTTGATGGCTGTGTCTCCTGCATaGTGCATTCTGGCACCCGAGAACATGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: ICPLHLMAVSPA*CILAPENMVAF
Trigger: AAAAGCAACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp ATGTGTAGGAAGATTTTAGGGTGGCTTTGGAACCAGTaGCCAGTAGACCGTCTGCATTGGCTCAGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: MCRKILGWLWNQ*PVDRLHWLREG
Trigger: TCCTTCTCTGAGCCAATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GGTTTGCATATGTGTAGGAAGATTTTAGGGTGGCTTTaGAACCAGTGCCCAGTAGACCGTCTGCATTGGCTC +
Preference number: 3 (lower is better)
Translates to: GLHMCRKILGWL*NQCPVDRLHWL
Trigger: GAGCCAATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACATATGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp CAGGTGCATAGGTGGGAAGTCGCTTATTCAATGTCATaGGGCCCATGCTGTGAAATTCACAGCATTGCCATC +
Preference number: 3 (lower is better)
Translates to: QVHRWEVAYSMS*GPCCEIHSIAI
Trigger: GATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCTATGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp CATCTTACACAAGCAAACAAACCACCCAACCATTGGTaGCTAGAATCTGGAATGCGGCCGTGGGGAGTTGAA +
Preference number: 3 (lower is better)
Translates to: HLTQANKPPNHW*LESGMRPWGVE
Trigger: TTCAACTCCCCACGGCCGCATTCCAGATTCTAGTCACCAATGGTTGGGTGGTTTGTTTGCTTGTGTAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp CAATATGGAGGGGGCAATCATGACTTGGCTGTAGCCTaGAGAGTTATGTCTCTTGTGAGGCATGGCAGAGTA +
Preference number: 3 (lower is better)
Translates to: QYGGGNHDLAVA*RVMSLVRHGRV
Trigger: TACTCTGCCATGCCTCACAAGAGACATAACTCTTCAGGCTACAGCCAAGTCATGATTGCCCCCTCCATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp CCAGACACACTAGTGCCAATATGGAGGGGGCAATCATaGCTTGGCTGTAGCCTGAAGAGTTATGTCTCTTGT +
Preference number: 3 (lower is better)
Translates to: PDTLVPIWRGQS*LGCSLKSYVSC
Trigger: ACAAGAGACATAACTCTTCAGGCTACAGCCAAGTCATGATTGCCCCCTCCATATTGGCACTAGTGTGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp GGTGTTCAGGCTTGTGTGGCAGGTGCCTTTATCTGCTaGGCCATCTGCCTGGCTCATAATCTTAATTTTGCA +
Preference number: 3 (lower is better)
Translates to: GVQACVAGAFIC*AICLAHNLNFA
Trigger: TGCAAAATTAAGATTATGAGCCAGGCAGATGGCTCAGCAGATAAAGGCACCTGCCACACAAGCCTGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp CTAAATCACAGTTTCTGTCTCAGGAGACCTGAGGTCTaGCTTTCCAACAACAAGCCTACAGCAGGGTTTAGC +
Preference number: 3 (lower is better)
Translates to: LNHSFCLRRPEV*LSNNKPTAGFS
Trigger: GCTAAACCCTGCTGTAGGCTTGTTGTTGGAAAGGCAGACCTCAGGTCTCCTGAGACAGAAACTGTGATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp TTTCAAACAAGTCCTCTGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCACCCCCTCAGTCTGTaGAGGCCTTTGAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: FQTSPLAMQRTHFYSRKTHPLSL*RPLSKH
Trigger: GTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTG...GGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGTGTCAGGTAAACACATaGTCAAGAAGAGTGGGTCAT +
Preference number: 3 (lower is better)
Translates to: HSFPIIKLISRKLGQLGWCQVNT*SRRVGH
Trigger: ATGACCCACTCTTCTTGACAATGTGTTTACCTGACA...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp TTGAGACCGTGCTTCAAAAACCAAAGTGTTGACTCCTaGGGAATGAGCCCAAGATTGCCTTCTGGTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LRPCFKNQSVDS*GMSPRLPSGFH
Trigger: GTGGAAACCAGAAGGCAATCTTGGGCTCATTCCTCAGGAGTCAACACTTTGGTTTTTGAAGCACGGTCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp AGGTGGGAAGTCGCTTATTCAATGTCATGGGGCCCATaGTGTGAAATTCACAGCATTGCCATCTTGAAACTC +
Preference number: 3 (lower is better)
Translates to: RWEVAYSMSWGP*CEIHSIAILKL
Trigger: GAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp GAAGCCTGCCACCATCTGAAGGAGCTTAGATTGTCATaGTTTGAGGATAAGTTGACAAGACCACTAGGAGGA +
Preference number: 3 (lower is better)
Translates to: EACHHLKELRLS*FEDKLTRPLGG
Trigger: TCCTCCTAGTGGTCTTGTCAACTTATCCTCAAACCATGACAATCTAAGCTCCTTCAGATGGTGGCAGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAAGCCTCTCATTTCTTaGTTTTGTACTCCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLKPLIS*FCTPLK
Trigger: CTTCAAAGGAGTACAAAACAAAGAAATGAGAGGCTT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGAGCACAGCGGTAATTaGACAGAGAGAATGTTTATG +
Preference number: 3 (lower is better)
Translates to: PTITVLALLSLDTCIGYIEHSGN*TERMFM
Trigger: CATAAACATTCTCTCTGTCAAATTACCGCTGTGCTC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATAGTGGGTCATTTCACTaGCCCTCCTCAGTAGATGCT +
Preference number: 3 (lower is better)
Translates to: TSTVRRTLLILNLFCRLHSGSFH*PSSVDA
Trigger: AGCATCTACTGAGGAGGGCAAGTGAAATGACCCACT...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp GGAAGTCGCTTATTCAATGTCATGGGGCCCATGCTGTaGAATTCACAGCATTGCCATCTTGAAACTCTCATC +
Preference number: 3 (lower is better)
Translates to: GSRLFNVMGPML*NSQHCHLETLI
Trigger: GATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCATGACATTGAATAAGCGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp GTAGCCAAGAGACTAGTCAAGTGGGATTACCACAAATaGACAAAGTTGCACAGCGAGGGAAGCAATCAATGG +
Preference number: 3 (lower is better)
Translates to: VAKRLVKWDYHK*TKLHSEGSNQW
Trigger: CCATTGATTGCTTCCCTCGCTGTGCAACTTTGTTCATTTGTGGTAATCCCACTTGACTAGTCTCTTGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp GGAGGCCAGGTTTTAGTCTCAGTAGCTTCAGTAGATTaGCCTCTGATAAAACACATTGGCATGGTGATAGGA +
Preference number: 3 (lower is better)
Translates to: GGQVLVSVASVD*PLIKHIGMVIG
Trigger: TCCTATCACCATGCCAATGTGTTTTATCAGAGGGCAATCTACTGAAGCTACTGAGACTAAAACCTGGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp CTAAAAGGTTTGCATATGTGTAGGAAGATTTTAGGGTaGCTTTGGAACCAGTGCCCAGTAGACCGTCTGCAT +
Preference number: 3 (lower is better)
Translates to: LKGLHMCRKILG*LWNQCPVDRLH
Trigger: ATGCAGACGGTCTACTGGGCACTGGTTCCAAAGCCACCCTAAAATCTTCCTACACATATGCAAACCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GTGTGGCAGGTGCCTTTATCTGCTGAGCCATCTGCCTaGCTCATAATCTTAATTTTGCATGATTCCTGCATA +
Preference number: 3 (lower is better)
Translates to: VWQVPLSAEPSA*LIILILHDSCI
Trigger: TATGCAGGAATCATGCAAAATTAAGATTATGAGCCAGGCAGATGGCTCAGCAGATAAAGGCACCTGCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACATGGTGATAGGAAATaGACTCAATATCTGATTGGG +
Preference number: 3 (lower is better)
Translates to: PTITVLALLSLDTCIGYIHGDRK*TQYLIG
Trigger: CCCAATCAGATATTGAGTCAATTTCCTATCACCATG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp CTGTGGGCTGGAGTTGGAGTTCAGTTAACAGCATACTaGCCTAACTTACACAAAGTCTATGGTTTGATTCTG +
Preference number: 3 (lower is better)
Translates to: LWAGVGVQLTAY*PNLHKVYGLIL
Trigger: CAGAATCAAACCATAGACTTTGTGTAAGTTAGGGCAGTATGCTGTTAACTGAACTCCAACTCCAGCCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp GCGCCATCTTTTCCTGCAAATGAACTAGGTAGCAACTaGAAAAAGACCCAACTCTCCCACCACTTAATAATC +
Preference number: 3 (lower is better)
Translates to: APSFPANELGSN*KKTQLSHHLII
Trigger: GATTATTAAGTGGTGGGAGAGTTGGGTCTTTTTCCAGTTGCTACCTAGTTCATTTGCAGGAAAAGATGGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp GGGACAGATCCTTTAGCAGAGCATTTATGGGGAGGGTaGAAATCCAAGCCTCTCATTTCTTTGTTTTGTACT +
Preference number: 3 (lower is better)
Translates to: GTDPLAEHLWGG*KSKPLISLFCT
Trigger: AGTACAAAACAAAGAAATGAGAGGCTTGGATTTCCACCCTCCCCATAAATGCTCTGCTAAAGGATCTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp CTTTTAAGTAGGGAAGATGGTATTTTTGTTGAGGATTaGCTTGGTGGCTCTCTGGCCGACTTATCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: LLSREDGIFVED*LGGSLADLSGS
Trigger: ACTACCTGATAAGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAATACCATCTTCCCTACTTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp TTGCAAAAGGATGTGGTGGTAGCTTTAACAGATGCATaGGTAAAACCTGCTAATGAGCTCACAGCTGAGATC +
Preference number: 3 (lower is better)
Translates to: LQKDVVVALTDA*VKPANELTAEI
Trigger: GATCTCAGCTGTGAGCTCATTAGCAGGTTTTACTCATGCATCTGTTAAAGCTACCACCACATCCTTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp CAACCACCTAACTCAAGGCTTTTGGCAGGAAAGATTTaGCATTCACAATCTCCCCATTACAAACGGAGCAAT +
Preference number: 3 (lower is better)
Translates to: QPPNSRLLAGKI*HSQSPHYKRSN
Trigger: ATTGCTCCGTTTGTAATGGGGAGATTGTGAATGTCAAATCTTTCCTGCCAAAAGCCTTGAGTTAGGTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp AAATCATGGCTCACAAATAAAGTAGCCATCATCACCTaGTACCCTTGTGGTGTCAACAAAGCAGTATCAGGA +
Preference number: 3 (lower is better)
Translates to: KSWLTNKVAIIT*YPCGVNKAVSG
Trigger: TCCTGATACTGCTTTGTTGACACCACAAGGGTAGCAGGTGATGATGGCTACTTTATTTGTGAGCCATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp CTTATGGCACCAACAATCAGAACTCAACGGAAATCATaGCTCACAAATAAAGTAGCCATCATCACCTGCTAC +
Preference number: 3 (lower is better)
Translates to: LMAPTIRTQRKS*LTNKVAIITCY
Trigger: GTAGCAGGTGATGATGGCTACTTTATTTGTGAGCCATGATTTCCGTTGAGTTCTGATTGTTGGTGCCATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CCA 72 bp ATGGTATTTTTGTTGAGGATTGACTTGGTGGCTCTCTaGCCGACTTATCAGGTAGTTCTCAGAGCTAAAATG +
Preference number: 3 (lower is better)
Translates to: MVFLLRIDLVAL*PTYQVVLRAKM
Trigger: CATTTTAGCTCTGAGAACTACCTGATAAGTCGGCCAGAGAGCCACCAAGTCAATCCTCAACAAAAATACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR-3UTR CAA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTAGATTTTGTCCATCATaGTCATATCAGAAAGCATGG +
Preference number: 3 (lower is better)
Translates to: WLCRGHISILGRPVFLLLRFCPS*SYQKAW
Trigger: CCATGCTTTCTGATATGACAATGATGGACAAAATCT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp CTTGAAGATTATCCTCTACCCTCAAGAACCAAAGTATaGAACCCTAAATCACAGTTTCTGTCTCAGGAGACC +
Preference number: 3 (lower is better)
Translates to: LEDYPLPSRTKV*NPKSQFLSQET
Trigger: GGTCTCCTGAGACAGAAACTGTGATTTAGGGTTTCATACTTTGGTTCTTGAGGGTAGAGGATAATCTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR GCA 72 bp GAATTTGTTGAAGTTTTCAAACAAGTCCTCTGGCTATaGAGAGGACACATTTCTATTCTAGGAAGACCCGTC +
Preference number: 3 (lower is better)
Translates to: EFVEVFKQVLWL*RGHISILGRPV
Trigger: GACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCAGAGGACTTGTTTGAAAACTTCAACAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp ATACCTTCTCCTTATGGTAGAACTTGCATATTAACATaGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATG +
Preference number: 3 (lower is better)
Translates to: IPSPYGRTCILT*AFQNWMQGGLM
Trigger: CATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCATGTTAATATGCAAGTTCTACCATAAGGAGAAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACACTTCTCTGCCTCTATTaGCTATTAACTAGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: QAYIPHTTNQLENFLRNTLLCLY*LLTSSG
Trigger: GCCTGAGCTAGTTAATAGCAAATAGAGGCAGAGAAG...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp CAATATCTGATTGGGAAACATCTTACAATGTGGGTTTaGCCAGATTACAGCTGGTTTGGGGTTGGTGTAAAA +
Preference number: 3 (lower is better)
Translates to: QYLIGKHLTMWV*PDYSWFGVGVK
Trigger: TTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp AGAGAATGTTTATGTATTGATACAATAGACGGGTTGTaGTGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAA +
Preference number: 3 (lower is better)
Translates to: RECLCIDTIDGL*WVSRVQKASKK
Trigger: TTTCTTGGATGCCTTCTGCACTCTGGAAACCCATCACAACCCGTCTATTGTATCAATACATAAACATTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp CACAGCGGTAATTTGACAGAGAGAATGTTTATGTATTaGTACAATAGACGGGTTGTGATGGGTTTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: HSGNLTERMFMY*YNRRVVMGFQS
Trigger: ACTCTGGAAACCCATCACAACCCGTCTATTGTATCAATACATAAACATTCTCTCTGTCAAATTACCGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp TACTTTGGGCAATATGAACAAGAAGAATGGGGATATTaGAATCGACCTTGCCAAGTAGCAACATGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: YFGQYEQEEWGY*NRPCQVATWWK
Trigger: TTTCCACCATGTTGCTACTTGGCAAGGTCGATTTCAATATCCCCATTCTTCTTGTTCATATTGCCCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR GCA 72 bp TGGAGATTCTTAAAGTACTGTATTCATAGCACTGTGTaGATCTTGCCCACAGTATGTATTTGGATAAAGCGG +
Preference number: 3 (lower is better)
Translates to: WRFLKYCIHSTV*ILPTVCIWIKR
Trigger: CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACAGTACTTTAAGAATCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR TCA 72 bp GTCAGTGAATTTATCAGACACATCGAGACACTGTTGTaGAACACCACATGCCAACACATAAAATGTCTCTTT +
Preference number: 3 (lower is better)
Translates to: VSEFIRHIETLL*NTTCQHIKCLF
Trigger: AAAGAGACATTTTATGTGTTGGCATGTGGTGTTTCACAACAGTGTCTCGATGTGTCTGATAAATTCACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CCA 72 bp GTAACAAATGGTTTTCAGTATCCCATTCCTCAGAGCTaGACAATCACAATTTCATGCTTAAGAGCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: VTNGFQYPIPQS*TITISCLRARK
Trigger: CTTTCTAGCTCTTAAGCATGAAATTGTGATTGTCCAGCTCTGAGGAATGGGATACTGAAAACCATTTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR-3UTR CAA 90 bp CAGGCATACATACCCCACACTACAAATCAACTGGAAAACTTCTTAAGAAATACATCCAGAAGTGACAATTaGCTTAGACAGCTTGAAGAT +
Preference number: 3 (lower is better)
Translates to: QAYIPHTTNQLENFLRNTSRSDN*LRQLED
Trigger: ATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGA...TGTATTTCTTAAGAAGTTTTCCAGTTGATTTGTAGTGTGGGGTATGTATGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR TCA 72 bp TGTTCATCTGACAAAGAGCAATACTATTTAAGGAACTaGGGAATTCTGAACAGTAAATCCCTCAAGGCATGT +
Preference number: 3 (lower is better)
Translates to: CSSDKEQYYLRN*GILNSKSLKAC
Trigger: ACATGCCTTGAGGGATTTACTGTTCAGAATTCCTCAGTTCCTTAAATAGTATTGCTCTTTGTCAGATGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGATCCCTCACGCCGTGTaGCCTGGGCGCGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: GGWCCLLREALSGAGRKWIPHAV*PGRARC
Trigger: GCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGAT...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCTGGGCGCGCAAGATaGGGCTGCAGTAGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGPGRAR*GCSSPP
Trigger: CGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGCTGCTCACTCCTCCTaGTCTCTCGGGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGAAHSS*SLGPPS
Trigger: GGAGGGAGGCCCGAGAGAGCAGGAGGAGTGAGCAGC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGGQHAH*AVFREL
Trigger: CAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPPSSAT*LTPSLA
Trigger: TGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGG...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTCTCCCGGGACCTCATaGCCATGCCGCACGAGACGC +
Preference number: 4 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTSPGTS*PCRTRR
Trigger: GCGTCTCGTGCGGCATGGGCATGAGGTCCCGGGAGA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGWCCLLREALSGAGRKWAIQNT*IRVLLR
Trigger: TCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACA +
Preference number: 4 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGCQAGH*ALALMT
Trigger: TGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCA...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PPTFLWTVHENQGPGPEILPRGG*TPCIPH
Trigger: GTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACC +
Preference number: 4 (lower is better)
Translates to: ACSPGLWAAWCPDGRLRRVQQLA*PLRWHT
Trigger: GGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAAC...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTCAGGGAATCAGGTCCTaGACTACTTTCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPQGIRS*TTFWTQ
Trigger: CTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTG...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGGCTGCCGCATCCTCTTaGCCTTTTCACAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGAAASS*PFHKWK
Trigger: CTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGC...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGRKDIK*RVLSTE
Trigger: CTCAGTGGACAGGACACGCCACTTGATGTCCTTCCT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPSCTTF*TQPHSL
Trigger: CAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGA...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGTCACGCCGTGTGCCCTaGGCGCGCAAGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ITELSWIFKALGGGWCCLSRRVP*ARKMRL
Trigger: CAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGA...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: PPTFLWTVHENQGPGPEIAAGRP*GPVGVD
Trigger: ATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGC...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAGGGCCCATGCAGGGCTaGAAGTCCTGGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSAFDGCVSCMLHSGTREGPMQG*KSWVSG
Trigger: TCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCC...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp GCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTTCGGAGATGGAAGGTGCCTGCATaGTCTTCTTCCTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: ACSPGLWAAWCPDGRLRRWKVPA*SSSLSP
Trigger: GGGAGATAAGGAAGAAGATCATGCAGGCACCTTCCA...TCTCCGAAGCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGTGCTGCTCTCACATTaGCAGGCTGCCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLVLLSH*QAARLA
Trigger: GGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCAC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTACAGGGCGACCAGGTaGTCCACTCCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTYRATR*STPTWY
Trigger: GTACCATGTCGGAGTGGATCACCTGGTCGCCCTGTA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HLMAVSPACCILAPENMVALPEI*ASAGGS
Trigger: GGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGTGCGTTTCTGTACAATaGTGGCCTTCAGAATCACAC +
Preference number: 4 (lower is better)
Translates to: GGWCCLLREALSGAGRKWCVSVQ*WPSESH
Trigger: GTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCA...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGGGACCTCATGCCCATaGCGCACGAGACGCTACAGG +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLGTSCP*RTRRYR
Trigger: CCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCGGCACTCAGGCATCATaGATTTCTCCGCCTGCGATG +
Preference number: 4 (lower is better)
Translates to: PPTFLWTVHENQGPGPEIGTQAS*ISPPAM
Trigger: CATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCC...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp GCCCCAGAACAGCTGGGGTCACTGAGACATGGCTGCTaGGGTAGTCTTCTTGTACCAGAGAGGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: APEQLGSLRHGC*GSLLVPERLLW
Trigger: CCACAGAAGCCTCTCTGGTACAAGAAGACTACCCAAGCAGCCATGTCTCAGTGACCCCAGCTGTTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp TGGGCTTTCCAGAATTGGATGCAAGGAGGGCTAATGAGAGAAATCCAATACCCACCTGGGCGCGCAAGATaGGGCTGCAGTAGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: WAFQNWMQGGLMREIQYPPGRAR*GCSSPP
Trigger: CGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGG...TGGGTATTGGATTTCTCTCATTAGCCCTCCTTGCATCCAATTCTGGAAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGCTGTGCCTTCAGCATaGGCTGCCGCATCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLMAVSPACCILAPENMVAVPSA*AAASSC
Trigger: GCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAATGCAGCCTGGGCCCATaGAGGGCTGGAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKCSLGP*RAGSPG
Trigger: CCCAGGACTTCCAGCCCTGCATGGGCCCAGGCTGCA...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: HLMAVSPACCILAPENMVRLRCL*LAHGAV
Trigger: GACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCG...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACAC +
Preference number: 4 (lower is better)
Translates to: PPTFLWTVHENQGPGPEITACPC*WRYPKH
Trigger: GTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGT...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTRSSLR*VCPSPH
Trigger: ATGGGGTGACGGACAGACCCATCTTAGACTGCTGCG...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCGTCAATGGGGCATTCTaGCAGCATGCACTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTVNGAF*QHALLR
Trigger: GCGGAGAAGTGCATGCTGCCAGAATGCCCCATTGAC...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp CTGCATTCTGGCACCCGAGAACATGGTTGCTTTTCCTaGTGGATGTGGCCAGGGTCTTCACCCTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: LHSGTREHGCFS*WMWPGSSPCLT
Trigger: GGTCAAGCAGGGTGAAGACCCTGGCCACATCCACAAGGAAAAGCAACCATGTTCTCGGGTGCCAGAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp CAGGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTaGAGCAAACACCCATCACAACATCACAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QVCAHPLSLLRP*SKHPSQHHRST
Trigger: GGTGCTCCTGTGATGTTGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATCTCTTCCTCATCTATaGTCTGGAAGGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGSLPHL*SGRCLH
Trigger: ATGCAGGCACCTTCCAGATCATAGATGAGGAAGAGA...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGLHFYW*AQFSNL
Trigger: CAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTGCCTTCAGCATGCGCTaGCGCATCCTCTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLAFSMR*RILLPF
Trigger: AAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGC...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACCTCCGTGGGCAGCATaGACACTGAGCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIPPWAA*TLSRLP
Trigger: CGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp GGTGGATGGTGCTGCCTGCTGAGGGAGGCTCTGTCAGGAGCTGGCAGGAAGTGGGTTTTGCCATTGGTATaGTCTTACCTGTTGTCGAAT +
Preference number: 4 (lower is better)
Translates to: GGWCCLLREALSGAGRKWVLPLV*SYLLSN
Trigger: ATTCGACAACAGGTAAGAGCATACCAATGGCAAAAC...CCACTTCCTGCCAGCTCCTGACAGAGCCTCCCTCAGCAGGCAGCACCATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAATGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACC +
Preference number: 4 (lower is better)
Translates to: SSAFDGCVSCMLHSGTRECPFHK*KSCRPT
Trigger: GGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCA...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp CCAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTaGCCCTTCTGTCCCTGGATACATGCATTGGATACA +
Preference number: 4 (lower is better)
Translates to: PTQIPWAPPLLS*PFCPWIHALDT
Trigger: TGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp GAAATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EITELSWIFKALGGGWCCLPRGG*TPCIPH
Trigger: GTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAG...GCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTGGGCAATTCTCTCGATaGCGACTCTGGCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: HLMAVSPACCILAPENMVGQFSR*RLWPLV
Trigger: CACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCC...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACAGGACAGGGGACACTaGGGTCCAGCTGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIQDRGH*GPAVPS
Trigger: TGAAGGCACAGCTGGACCTCAGTGTCCCCTGTCCTG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGATCACGCCGTGTGCCCTaGGCGCGCAAGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRSRRVP*ARKMRL
Trigger: CAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGA...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCAGTTACTCATAAACTaGGTCTCTTCCTCATCTATG +
Preference number: 4 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGQLLIN*VSSSSM
Trigger: CATAGATGAGGAAGAGACCCAGTTTATGAGTAACTG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGAGTTTCTGTACAATGCTaGCCTTCAGAATCACACAGC +
Preference number: 4 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGVSVQC*PSESHS
Trigger: GCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAAC...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTCACCCCATCAAGTGTaGGATCCTGTTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTSPHQV*DPVHTA
Trigger: AGCTGTGTGAACAGGATCCCACACTTGATGGGGTGA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp CAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTaGCAGGCAGACCTTGCAAAGAAAGCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: QKASKKVCPFCC*QADLAKKAQHR
Trigger: TCTGTGCTGTGCTTTCTTTGCAAGGTCTGCCTGCAAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PPTFLWTVHENQGPGPEISSHKT*VCTWQF
Trigger: GAACTGCCAAGTACAGACTCACGTTTTATGGGAACT...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACACTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: GLCSPPQSVEAFEQTPITLHFYW*AQFSNL
Trigger: CAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAG...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIWGPSW*GRTSSG
Trigger: GCCACTTGATGTCCTTCCTCACCATGATGGGCCCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAATCCCTCACGCCGTGTaGCCTGGGCGCGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRIPHAV*PGRARC
Trigger: GCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGAT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLSSPPT*SLCPGS
Trigger: AGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATACCCAGCCACACTCCTTaGTGCACAGATCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIPSHTP*CTDPLQ
Trigger: CTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGG...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAAACCATGGGGACCAGTTaGAGTAGATGCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSAFDGCVSCMLHSGTRETMGTS*SRCRFQ
Trigger: CTGAAACCTGCATCTACTCCAACTGGTCCCCATGGT...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACC +
Preference number: 4 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKVQQLA*PLRWHT
Trigger: GGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAAC...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAAGAGAGCACTCCTCGTTaGCTGTGCACTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKESTPR*LCTSPS
Trigger: AGACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTC...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAACTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKLRTVW*ILTRLS
Trigger: GGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAG...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACAGTTTCTGTACAATGCTaGCCTTCAGAATCACACAGC +
Preference number: 4 (lower is better)
Translates to: GLCSPPQSVEAFEQTPITVSVQC*PSESHS
Trigger: GCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAAC...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp TTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATaGGATACATACATCGCCTCTGAGCCCATGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLSLPFCPWIHA*DTYIASEPMGV
Trigger: AACCCCCATGGGCTCAGAGGCGATGTATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp CAGGAGCACCATACATATGGGGCTTCCTCCATCATCTaGGGAGATGCAGGGTGGAAGAAAAGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: QEHHTYGASSII*GDAGWKKRRTV
Trigger: CACTGTCCTTCTTTTCTTCCACCCTGCATCTCCCAAGATGATGGAGGAAGCCCCATATGTATGGTGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp ATTCACAGCATTGCCATCTTGAAACTCTCATCAGATTaGGAATGGGGGTGGCGCTGGGGCATGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IHSIAILKLSSD*EWGWRWGMSAW
Trigger: CCAAGCAGACATGCCCCAGCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp TGGGGCCCATGCTGTGAAATTCACAGCATTGCCATCTaGAAACTCTCATCAGATTTGGAATGGGGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: WGPCCEIHSIAI*KLSSDLEWGWR
Trigger: GCGCCACCCCCATTCCAAATCTGATGAGAGTTTCAAGATGGCAATGCTGTGAATTTCACAGCATGGGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCG +
Preference number: 4 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRQFGAF*PGCPRA
Trigger: CGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLTSWSR*RFQGCH
Trigger: ATGACACCCCTGAAACCTGCATCTACTCCAACTGGT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCACAAGTGGAAGAGCTaGAGGCCGACCATGGGGACC +
Preference number: 4 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRHKWKS*RPTMGT
Trigger: GGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTACTGAGGTCCAGCTGTaGCTTCAGCATGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: KPANELTAEINILLLLTVTEVQL*LQHALP
Trigger: CGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGT...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KPANELTAEINILLLLTVGCGTS*VAQSLG
Trigger: GCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIAIQNT*IRVLLR
Trigger: TCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: LTMKTQVISNSQAPMATRRSSLR*VCPSPH
Trigger: ATGGGGTGACGGACAGACCCATCTTAGACTGCTGCG...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCAGGGCTGGAAGTCCTaGGTGTCAGGACAGGGGACA +
Preference number: 4 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRQGWKS*VSGQGT
Trigger: TGTCCCCTGTCCTGACACCCAGGACTTCCAGCCCTG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp TCCTCTGCATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAATTGCAGCTGGTAAACTaGGAGCTTTTGAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSAFDGCVSCMLHSGTRELQLVN*ELLNLF
Trigger: GAAGAGGTTCAAAAGCTCCCAGTTTACCAGCTGCAA...TTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp ACAGAGACAGGAGGAAACTTGGAGCTCACTGGCCAGTaGGCTGAGCAAAATTGGTGTGTCCTAGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TETGGNLELTGQ*AEQNWCVLGLF
Trigger: AAAGAGACCTAGGACACACCAATTTTGCTCAGCCAACTGGCCAGTGAGCTCCAAGTTTCCTCCTGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATATGGAAGGTGCCTGCATaGTCTTCTTCCTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIWKVPA*SSSLSP
Trigger: GGGAGATAAGGAAGAAGATCATGCAGGCACCTTCCA...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGAGGGGTGCTTTCAGTaGCGGCCACAGGACAGTTAC +
Preference number: 4 (lower is better)
Translates to: KPANELTAEINILLLLTVEGCFQ*RPQDSY
Trigger: GTAACTGTCCTGTGGCCGTCACTGAAAGCACCCCTC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGGAGGGGTGCTTTCAGTaGCGGCCACAGGACAGTTAC +
Preference number: 4 (lower is better)
Translates to: QFGDFVHHCHIRKHGDMQEGCFQ*RPQDSY
Trigger: GTAACTGTCCTGTGGCCGTCACTGAAAGCACCCCTC...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGC +
Preference number: 4 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRTGTTR*VHSQWG
Trigger: GCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ATGGGTTTCCAGAGTGCAGAAGGCATCCAAGAAAGTGTGCCCGTTCTGCTGCTTATCTTGACCATACGGTaGCTCTTCTTCATACCCATC +
Preference number: 4 (lower is better)
Translates to: MGFQSAEGIQESVPVLLLILTIR*LFFIPI
Trigger: GATGGGTATGAAGAAGAGGCACCGTATGGTCAAGAT...AAGCAGCAGAACGGGCACACTTTCTTGGATGCCTTCTGCACTCTGGAAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LTMKTQVISNSQAPMATRSSPPT*SLCPGS
Trigger: AGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACT...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACAC +
Preference number: 4 (lower is better)
Translates to: WLCRGHISILGRPVFLLLTACPC*WRYPKH
Trigger: GTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGT...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CCA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGCCCACGTTCCAGTCTaGACTGGGGCCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMAHVPV*TGAHHG
Trigger: ACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KPANELTAEINILLLLTVALHSL*AGYTPK
Trigger: TTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ITELSWIFKALGGGWCCLSSHKT*VCTWQF
Trigger: GAACTGCCAAGTACAGACTCACGTTTTATGGGAACT...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp ACCAGCACTGTTAGGAGGACACTCTTGATCTTGAATTTATTTTGCCGGCTTCATCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TSTVRRTLLILNLFCRLHPSSAT*LTPSLA
Trigger: TGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGG...ATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR TCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGTGACCTTTCCCACATaGCTTGTTACATTCAGACCA +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIVTFPT*LVTFRP
Trigger: TGGTCTGAATGTAACAAGTCATGTGGGAAAGGTCAC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGCACGTTGCACGCTCTaGTCTCCTTCTTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRARCTL*SPSCLC
Trigger: GCAAAGACAAGAAGGAGATCAGAGCGTGCAACGTGC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp CCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGATACATGCATTGGATACATAGATCTGGAAGGTGCCTaGATGATCTTCTTCCTTATC +
Preference number: 4 (lower is better)
Translates to: PTITVLALLSLDTCIGYIDLEGA*MIFFLI
Trigger: GATAAGGAAGAAGATCATGCAGGCACCTTCCAGATC...TATGTATCCAATGCATGTATCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGGAGTTGTGCTAAATGCGTTTCTGTACAATaGTGGCCTTCAGAATCACAC +
Preference number: 4 (lower is better)
Translates to: TEEPVTLETYQDTWSCAKCVSVQ*WPSESH
Trigger: GTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCA...TTTAGCACAACTCCAGGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGATGCACTTCTCCGCCTaGTCCAGGTCCTCGTTACAG +
Preference number: 4 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMMHFSA*SRSSLQ
Trigger: CTGTAACGAGGACCTGGAGCAGGCGGAGAAGTGCAT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AAACCTGCTAATGAGCTCACAGCTGAGATCAACATCCTCTTACTCTTGACTGTTGACTCTTCTCTCAGCTaGTCACTCCTCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KPANELTAEINILLLLTVDSSLS*SLLLLS
Trigger: AGAGAGCAGGAGGAGTGAGCAGCTGAGAGAAGAGTC...AACAGTCAAGAGTAAGAGGATGTTGATCTCAGCTGTGAGCTCATTAGCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp GCTAGCGAAGCCTGCCACCATCTGAAGGAGCTTAGATaGTCATGGTTTGAGGATAAGTTGACAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: ASEACHHLKELR*SWFEDKLTRPL
Trigger: TAGTGGTCTTGTCAACTTATCCTCAAACCATGACAATCTAAGCTCCTTCAGATGGTGGCAGGCTTCGCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGCGGGTTCGAATCATGTaGCCTTTCCCACATGACTTG +
Preference number: 4 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRRVRIM*PFPHDL
Trigger: CAAGTCATGTGGGAAAGGTCACATGATTCGAACCCG...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATATCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYISRRCQ*QHPRES
Trigger: TGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGA...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR GCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATACGGCACTTCTTGCGTTaGACAGTCTCTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIRHFLR*TVSGQG
Trigger: ACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCG...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp AGGAGGCCAGGTTTTAGTCTCAGTAGCTTCAGTAGATaGCCCTCTGATAAAACACATTGGCATGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: RRPGFSLSSFSR*PSDKTHWHGDR
Trigger: CCTATCACCATGCCAATGTGTTTTATCAGAGGGCAATCTACTGAAGCTACTGAGACTAAAACCTGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CCA 90 bp GAGCCAGACAAACTTGGGCTTAAAGTTCTAAGAAACCTTAGAACTTTGACTGACTCACCCCATCAAGTGTaGGATCCTGTTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: EPDKLGLKVLRNLRTLTDSPHQV*DPVHTA
Trigger: AGCTGTGTGAACAGGATCCCACACTTGATGGGGTGA...GTCAGTCAAAGTTCTAAGGTTTCTTAGAACTTTAAGCCCAAGTTTGTCTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp ATCAGAAAGCATGGTGACATGCAGGCAGACATGGTATaGGAGAAGGAGCTAAGAGTTCTACATCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: IRKHGDMQADMV*EKELRVLHLDS
Trigger: TGAATCCAGATGTAGAACTCTTAGCTCCTTCTCCAATACCATGTCTGCCTGCATGTCACCATGCTTTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR GCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYITVTQL*QRFEHP
Trigger: CGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGT...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR TCA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGGTACACCCCCAAACTaGGGTTCCATTTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIGTPPN*GSIWIV
Trigger: GACAATCCAAATGGAACCTCAGTTTGGGGGTGTACC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp GCAGTAAGCAAGACCAGCACTGTTAGGAGGACACTCTaGATCTTGAATTTATTTTGCCGGCTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: AVSKTSTVRRTL*ILNLFCRLHYF
Trigger: GAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCTTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp GGCTCTCGTGTGTTAAGGAAAATACATATTCAGGGGTaGTACATAGATGTGGCTGGACATATTCTGATATGT +
Preference number: 4 (lower is better)
Translates to: GSRVLRKIHIQG*YIDVAGHILIC
Trigger: ACATATCAGAATATGTCCAGCCACATCTATGTACAACCCCTGAATATGTATTTTCCTTAACACACGAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp TCAATATCTGATTGGGAAACATCTTACAATGTGGGTTaGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: SISDWETSYNVG*TRLQLVWGWCK
Trigger: TTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATTGTAAGATGTTTCCCAATCAGATATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
3UTR CAA 72 bp TGTCTCTTTCCAGAAGTGACAATTTGCTTAGACAGCTaGAAGATTATCCTCTACCCTCAAGAACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: CLFPEVTICLDS*KIILYPQEPKY
Trigger: ATACTTTGGTTCTTGAGGGTAGAGGATAATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGAAAGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp CCAACACATAAAATGTCTCTTTCCAGAAGTGACAATTaGCTTAGACAGCTTGAAGATTATCCTCTACCCTCA +
Preference number: 4 (lower is better)
Translates to: PTHKMSLSRSDN*LRQLEDYPLPS
Trigger: TGAGGGTAGAGGATAATCTTCAAGCTGTCTAAGCAAATTGTCACTTCTGGAAAGAGACATTTTATGTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
3UTR CAA 72 bp AGCAAGACCAGCACTGTTAGGAGGACACTCTTGATCTaGAATTTATTTTGCCGGCTTCATTATTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SKTSTVRRTLLI*NLFCRLHYFFV
Trigger: TACAAAGAAATAATGAAGCCGGCAAAATAAATTCAAGATCAAGAGTGTCCTCCTAACAGTGCTGGTCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS TCA 90 bp CCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCCGCATGCCCTTCCCACAGGTCACGC +
Preference number: 5 (lower is better)
Translates to: PAPGPRYSHPALPEI*ASAGGSACPSHRSR
Trigger: GCGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp ACTCCTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTaGTGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: TPPALSGLPPAQLLD*WAAKAFPGAALLAL
Trigger: CAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp CCGTGTATCCCTCACGCCGTGTGCCCTGGGCGCGCAAGATGCGGCTaGAGTAGCCCTCCGACTTGGTCACTTTGTCCAGGGTCTCATCTG +
Preference number: 5 (lower is better)
Translates to: PCIPHAVCPGRARCG*SSPPTWSLCPGSHL
Trigger: CAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGAGGGATACACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS GCA 90 bp GTCTCCTCCGTGGGCAGCATGCACACTGAGCCGTCTTCCGGGAACTaGTTCACGTATCTCTCCCGGGACCTCATGCCCATGCCGCACGAG +
Preference number: 5 (lower is better)
Translates to: VSSVGSMHTEPSSGN*FTYLSRDLMPMPHE
Trigger: CTCGTGCGGCATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp GCACTTCTCCGCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCGCTGGCGGGTCCGCATGCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: ALLRLLQVLVTVTQL*QRFEHPLAGPHALP
Trigger: GGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGCGGAGAAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp TGCTCACTCCTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTaGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: CSLLLLSRASLQRSF*TDGLRRHFRVRHFL
Trigger: CAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAGGAGTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp TGCTTCCTGGCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCACGCCGTGTGCCCTGGGCGCGCAAGA +
Preference number: 5 (lower is better)
Translates to: CFLAYRSQGRLPRGG*TPCIPHAVCPGRAR
Trigger: TCTTGCGCGCCCAGGGCACACGGCGTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS TCA 90 bp GGGACCTCATGCCCATGCCGCACGAGACGCTACAGGGCGACCAGGTaGTCCACTCCGACATGGTACAGGTGGAGCCATCTTCATCGCTGC +
Preference number: 5 (lower is better)
Translates to: GTSCPCRTRRYRATR*STPTWYRWSHLHRC
Trigger: GCAGCGATGAAGATGGCTCCACCTGTACCATGTCGGAGTGGATCACCTGGTCGCCCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp TCCAGCGCAGCTTCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTaGGGCACTTCTTGCGTTGCACAGTCTCTGGGCAGGGTACACCCC +
Preference number: 5 (lower is better)
Translates to: SSAASGLMGCEGISG*GTSCVAQSLGRVHP
Trigger: GGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp TGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTGATGGGCTaGGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCT +
Preference number: 5 (lower is better)
Translates to: CSLGPPSSAASGLMG*EGISGCGTSCVAQS
Trigger: AGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp GTGTGCCCTGGGCGCGCAAGATGCGGCTGCAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCTCATCTGAGAAAGCTAGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VCPGRARCGCSSPPT*SLCPGSHLRKLALR
Trigger: CCGCAGCGCTAGCTTTCTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAGCTCTGCCAGAGATTaGAGCATCCGCTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGSSARD*SIRWRV
Trigger: GACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp GCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACGGTaGCTCTTCTTCATACCCATCCCACAGGTGGCACTGCAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ALHMEPSAGLILTIR*LFFIPIPQVALQSS
Trigger: GGACGACTGCAGTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp TCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTGAGCATCCGCTaGCGGGTCCGCATGCCCTTCCCACAGGTCACGCTACAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: SSLQSPSSARDLSIR*RVRMPFPQVTLQSL
Trigger: GAGCGACTGTAGCGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp GTTGACTGTGCACTTCTCCGTCTCCTCCGTGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTGCTTCACGTATCTCTCCCGGGACCT +
Preference number: 5 (lower is better)
Translates to: VDCALLRLLRGQHAH*AVFRELLHVSLPGP
Trigger: AGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGACGGAGAAGTGCACAGTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp GCGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTaGCCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: AMSLPCTWSRPRGSS*PYGASSSYPSHRWH
Trigger: GTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp CATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCGCATTCGACAGCCTGGGAACTGCTC +
Preference number: 5 (lower is better)
Translates to: HVALLDPTSAQFGAF*PGCPRAHSTAWELL
Trigger: GAGCAGTTCCCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp AAGCACGGGATGGTATGGCACTCAGGCATCATGCATTTCTCCGCCTaGGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATC +
Preference number: 5 (lower is better)
Translates to: KHGMVWHSGIMHFSA*DVSALHMEPSAGLI
Trigger: GATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCATCCCGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTAACGTGAGTCTGTACTaGGCAGTTCCACAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPNVSLY*AVPQAQ
Trigger: CTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp GGTATGGCACTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACG +
Preference number: 5 (lower is better)
Translates to: GMALRHHAFLRLRCL*LAHGAVRGAHLDHT
Trigger: CGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp TCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGCAGGGTACACCCCCAAACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SGLMGCEGISGCGTS*VAQSLGRVHPQTEV
Trigger: AACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp TCACAGTCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCCACGGGCGCATTCGACAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SQSCSALGSHLRTVW*ILTRLSTGAFDSLG
Trigger: TCCCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp GTGCCTTCAGCATGCGCTGCCGCATCCTCTTGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACCATGGGGACCAGTTGGAGTAGATGC +
Preference number: 5 (lower is better)
Translates to: VPSACAAASSCPFHK*KSCRPTMGTSWSRC
Trigger: GCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CTTCAGCTGCATGCAGTCCAGGACTGTGGGCAGCCTGGTGTCCAGATGGTAGGCTGTTCACACAGCTTCTaGGTCAGGGAGCCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: LQLHAVQDCGQPGVQMVGCSHSF*VREPSS
Trigger: AGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACA...GCCTACCATCTGGACACCAGGCTGCCCACAGTCCTGGACTGCATGCAGCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp CTCCTCCTTCAGGGCACTGAAGAACCCGTGACCCTGGAGACTTACCAAGATACCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCG +
Preference number: 5 (lower is better)
Translates to: LLLQGTEEPVTLETYQDTCDVSA*HMEPSA
Trigger: CGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCA...GGTATCTTGGTAAGTCTCCAGGGTCACGGGTTCTTCAGTGCCCTGAAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp AGAATCACACAGCCTGTCCCTGTTGGTGGCGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGAGGGGTGCTTTCAGTGACGGCCACA +
Preference number: 5 (lower is better)
Translates to: RITQPVPVGGAIQNT*IRVLLRGVLSVTAT
Trigger: TGTGGCCGTCACTGAAAGCACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 90 bp GCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: AKAFPGAALLALHSL*AGYTPKLRFHLDCP
Trigger: CGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp TCTTCACAGTCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCTGTCCACGGGCGCATTCGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSQSCSALGSHLRTV*CILTRLSTGAFDSL
Trigger: CAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACTGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp CTGCAGATAGGCCCACGTTCCAGTCTGGACTGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGCGTGTCCTGTCCACTGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: LQIGPRSSLDWGPSW*GRTSSGVSCPLRIQ
Trigger: CTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGCCTATCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp GAATCAGGTCCTGCACTACTTTCTGGACCCAGCCACACTCCTTGGTaGACAGATCCTCTGCAGATAGGCCCACGTTCCAGTCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: ESGPALLSGPSHTPW*TDPLQIGPRSSLDW
Trigger: CCAGTCCAGACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp CTGTACAATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTGGTaGCGCTATCCAAAACACCTGGATCCGTGTCCTCCTCCGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LYNAGLQNHTACPCW*RYPKHLDPCPPPRG
Trigger: ACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 90 bp TTCCAGTCTGGACTGGGGCCCATCATGGTGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAGAATTCAGCTGAGGGTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: FQSGLGPIMVRKDIK*RVLSTENSAEGAAL
Trigger: GAGAGCAGCACCCTCAGCTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp CTGTCAGTGCCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTGGTGCACAGATCCTCTGCAGATAGG +
Preference number: 5 (lower is better)
Translates to: LSVPASQGIRSCTTF*TQPHSLVHRSSADR
Trigger: CCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCACAGCCTGTCCCTGTaGGTGGCGCTATCCAAAACA +
Preference number: 5 (lower is better)
Translates to: PPTFLWTVHENQGPGPEIHSLSL*VALSKT
Trigger: TGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CCCCCGACTTTCCTCTGGACTGTCCATGAAAACCAGGGCCCTGGTCCAGAAATCCGCTGCCGCATCCTCTaGCCCTTTTCACAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: PPTFLWTVHENQGPGPEIRCRIL*PFSQVE
Trigger: TTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCG...GATTTCTGGACCAGGGCCCTGGTTTTCATGGACAGTCCAGAGGAAAGTCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp GAATTGTGGGCTTGTTTGGTGACTCATAGGTCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTGGACCC +
Preference number: 5 (lower is better)
Translates to: ELWACLVTHRSRRCQ*QHPRESGPALLSGP
Trigger: GGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGACCTATGAGTCACCAAACAAGCCCACAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp GCTGAGGGTGCTGCTCTCACATTGACAGGCTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACAGTGAGGACTTCATCACTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: AEGAALTLTGCQAGH*ALALMTVRTSSLCC
Trigger: ACAACAGAGTGATGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCACCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACACTGGGCTTTGGCTTaGATGACAGTGAGGACTTCA +
Preference number: 5 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGHWALA*MTVRTS
Trigger: TGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp GCGAGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTACAATATCGTCCACGTaGTCAGGTACAATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: ARGKARRSVLTPEQQDPPTISST*SGTMLH
Trigger: GTGCAACATTGTACCTGACAACGTGGACGATATTGT...AGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGAAACTGAGGTTCCATTaGGATTGTCCGGGTTCGAAT +
Preference number: 5 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGKLRFH*DCPGSN
Trigger: ATTCGAACCCGGACAATCCAAATGGAACCTCAGTTT...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp TTTCTGTACAATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACACCTGGATCCGTGTCCTCCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: FLYNAGLQNHTACPC*WRYPKHLDPCPPPR
Trigger: CCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 90 bp CATCCTCTTGCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: HPLALFTSGRAAGRP*GPVGVDAGFRGVIF
Trigger: GAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CAACCCAGATTCCCTGGGCCCCACCATTACTGTCCTTGCCCTTCTGTCCCTGGACCCTCCTGGTTCTCTTaGAGGGCAATTAACGTGAAA +
Preference number: 5 (lower is better)
Translates to: QPRFPGPHHYCPCPSVPGPSWFS*RAINVK
Trigger: TTTCACGTTAATTGCCCTCAAAGAGAACCAGGAGGG...TCCAGGGACAGAAGGGCAAGGACAGTAATGGTGGGGCCCAGGGAATCTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp AGGGGTAAGGCTCGGAGGTCAGTCCTGACACCAGAACAGCAGGACCCACCTGGGCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTT +
Preference number: 5 (lower is better)
Translates to: RGKARRSVLTPEQQDPPGQGALV*KINYAF
Trigger: AAACGCATAATTTATTTTCAAGACGAGGGCTCCCTG...CCCAGGTGGGTCCTGCTGTTCTGGTGTCAGGACTGACCTCCGAGCCTTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp GGTCTGTGCTCACCCCCTCAGTCTGTTGAGGCCTTTGAGCAAACACCCATCACAAGTTCAGCAACTTGCTaGACCCCTTCGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: GLCSPPQSVEAFEQTPITSSATC*TPSLAY
Trigger: GTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACT...TGTGATGGGTGTTTGCTCAAAGGCCTCAACAGACTGAGGGGGTGAGCACAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS CCA 90 bp TCTCTCGATGACGACTCTGGCCACTTGTGTGATGGACCCACCTTCTaGGTCATAGAAAGGACTCTGAGGATGATCCAGACTAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SLDDDSGHLCDGPTF*VIERTLRMIQTSQG
Trigger: CCCCTGACTAGTCTGGATCATCCTCAGAGTCCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTTGTTCACACAGCTTCTaGGTCAGGGAGCCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: HLMAVSPACCILAPENMVCSHSF*VREPSS
Trigger: AGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACA...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp CTTTCCCACATGACTTGTTACATTCAGACCACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGCATTCTGGCAGCATGCACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: LSHMTCYIQTTGTTR*VHSQWGILAACTSP
Trigger: CGGAGAAGTGCATGCTGCCAGAATGCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCATGTGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 90 bp CGAATTTCTTCCTCCATTTTTACTGGTGAGCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCATACCCTCCATACTCCCACAGCACG +
Preference number: 5 (lower is better)
Translates to: RISSSIFTGEPSSAT*LTPSLAYPPYSHST
Trigger: CGTGCTGTGGGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp CTAACAATGAAAACTCAAGTTATTTCCAACTCCCAGGCACCAATGGCCACCAGGGCCCAGTTCAGCAACTaGCTTGACCCCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LTMKTQVISNSQAPMATRAQFSN*LDPFAG
Trigger: GCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGC...CCTGGTGGCCATTGGTGCCTGGGAGTTGGAAATAACTTGAGTTTTCATTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS TCA 90 bp GGTAATCCTTCGGATGAGTCTTCTCGGACCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTCCACAGGCGCAGCAGTCTAAGATGG +
Preference number: 5 (lower is better)
Translates to: GNPSDESSRTSSHKT*VCTWQFHRRSSLRW
Trigger: CCATCTTAGACTGCTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTTTTATGGGAACTGGTCCGAGAAGACTCATCCGAAGGATTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp CATTTGATGGCTGTGTCTCCTGCATGCTGCATTCTGGCACCCGAGAACATGGTTTTGTCAGGTACAATGTaGCACTGTTCTCCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: HLMAVSPACCILAPENMVLSGTM*HCSPFR
Trigger: CCGGAAGGGAGAACAGTGCAACATTGTACCTGACAA...AACCATGTTCTCGGGTGCCAGAATGCAGCATGCAGGAGACACAGCCATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGACGGGTGCGGCACTTCTaGCGTTGCACAGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRRVRHF*RCTVSG
Trigger: CCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCG...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGGTGCTGCTCTCACATaGACAGGCTGCCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMGAALT*TGCQAG
Trigger: GCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCACC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGCGGCACTTCTTGCGTaGCACAGTCTCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMAALLA*HSLWAG
Trigger: CCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp GACTTCATCACTCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: DFITLLSNFFLHFYW*AQFSNLLDPFAGIP
Trigger: GGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 90 bp GTATGCTCTTACCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: VCSYLLSNFFLHFYW*AQFSNLLDPFAGIP
Trigger: GGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGGTAAGAGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp TGGCTATGCAGAGGACACATTTCTATTCTAGGAAGACCCGTCTTCTTGCTCCTTTCCGACTTGGTCACTTaGTCCAGGGTCTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: WLCRGHISILGRPVFLLLSDLVT*SRVSSE
Trigger: CTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGA...AAGGAGCAAGAAGACGGGTCTTCCTAGAATAGAAATGTGTCCTCTGCATAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp CACTCTTTCCCCATAATTAAGCTTATTAGCAGGAAGCTGGGCCAGCTGGGTTGGCCCTCCTGGTTCTCTTaGAGGGCAATTAACGTGAAA +
Preference number: 5 (lower is better)
Translates to: HSFPIIKLISRKLGQLGWPSWFS*RAINVK
Trigger: TTTCACGTTAATTGCCCTCAAAGAGAACCAGGAGGG...CCAACCCAGCTGGCCCAGCTTCCTGCTAATAAGCTTAATTATGGGGAAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGGAGAGCACTCCTCGTaGACTGTGCACTTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRGEHSS*TVHFSV
Trigger: GACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTCC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGAGTCATGTAGCGCTCTaGGATCCCACCTCCGCACAG +
Preference number: 5 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRSHVAL*DPTSAQ
Trigger: CTGTGCGGAGGTGGGATCCAAGAGCGCTACATGACT...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 90 bp TGTCCGTCACCCCATCAAGTGTGGGATCCTGTTCACACAGCTTCTTaGTCAGGGAGCCCTCGTCTTGAAAATAAATTATGCGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: CPSPHQVWDPVHTAS*SGSPRLENKLCVSV
Trigger: TACAGAAACGCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAGGATCCCACACTTGATGGGGTGACGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp CAGTTCGGAGATTTTGTCCATCATTGTCATATCAGAAAGCATGGTGACATGCAGAACGTGAGTCTGTACTaGGCAGTTCCACAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QFGDFVHHCHIRKHGDMQNVSLY*AVPQAQ
Trigger: CTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTT...CTGCATGTCACCATGCTTTCTGATATGACAATGATGGACAAAATCTCCGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGACCCAGCCACACTCCTaGGTGCACAGATCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMTQPHS*VHRSSA
Trigger: TGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGT...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp ATTACTGAACTAAGTTGGATTTTCAAGGCGCTGGGAGGTGGATGGTGCTGCCTGCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTT +
Preference number: 5 (lower is better)
Translates to: ITELSWIFKALGGGWCCLQGALV*KINYAF
Trigger: AAACGCATAATTTATTTTCAAGACGAGGGCTCCCTG...CAGGCAGCACCATCCACCTCCCAGCGCCTTGAAAATCCAACTTAGTTCAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS-3UTR CAA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGAGTTCAGCAACTTGCTaGACCCCTTCGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: CIHSTVCILPTVCIWIKRSSATC*TPSLAY
Trigger: GTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACT...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGCCCAGTTCAGCAACTaGCTTGACCCCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIAQFSN*LDPFAG
Trigger: GCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGTCCGACTTGGTCACTTaGTCCAGGGTCTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMSDLVT*SRVSSE
Trigger: CTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGA...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp AATGTGGGTTTGACCAGATTACAGCTGGTTTGGGGTTGGTGTAAAATATATATAGACGACTCTGGCCACTaGTGTGATGGACCCACCTTC +
Preference number: 5 (lower is better)
Translates to: NVGLTRLQLVWGWCKIYIDDSGH*CDGPTF
Trigger: GAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTC...TATATATATTTTACACCAACCCCAAACCAGCTGTAATCTGGTCAAACCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TGTATTCATAGCACTGTGTGCATCTTGCCCACAGTATGTATTTGGATAAAGCGGGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGT +
Preference number: 5 (lower is better)
Translates to: CIHSTVCILPTVCIWIKREVPFG*SGFESC
Trigger: ACATGATTCGAACCCGGACAATCCAAATGGAACCTC...CCGCTTTATCCAAATACATACTGTGGGCAAGATGCACACAGTGCTATGAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAATCTCCTTCTTGTCTTaGCAGCTGGTAAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRISFLS*QLVNWE
Trigger: CTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGAT...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TTTTCTGACTTCAACAACCTTTGCTGGCTTGGGACAGTTTCTCTAGTTCTGAGAGACTTCATCACTCTGTaGTCGAATTTCTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: FSDFNNLCWLGTVSLVLRDFITL*SNFFLH
Trigger: ATGGAGGAAGAAATTCGACAACAGAGTGATGAAGTC...TCTCAGAACTAGAGAAACTGTCCCAAGCCAGCAAAGGTTGTTGAAGTCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp ATGGGGGTTCGAAAGCAGGCACCGTCATTTAAATGTGACATTTTAATATGGATGGTAAACTGGGAGCTTTaGAACCTCTTCTTCACAGTC +
Preference number: 5 (lower is better)
Translates to: MGVRKQAPSFKCDILIWMVNWEL*NLFFTV
Trigger: GACTGTGAAGAAGAGGTTCAAAAGCTCCCAGTTTAC...CATCCATATTAAAATGTCACATTTAAATGACGGTGCCTGCTTTCGAACCCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS-3UTR CAA 90 bp TCAAATCAAATGGAGGAGAAACATAAGCTCATTCTGAAGATGTTCTCACACTGTGTATGCTCTTACCTGTaGTCGAATTTCTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SNQMEEKHKLILKMFSHCVCSYL*SNFFLH
Trigger: ATGGAGGAAGAAATTCGACAACAGGTAAGAGCATAC...ACAGTGTGAGAACATCTTCAGAATGAGCTTATGTTTCTCCTCCATTTGATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS GCA 72 bp CCTCACGCCGTGTGCCCTGGGCGCGCAAGATGCGGCTaGAGTAGCCCTCCGACTTGGTCACTTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PHAVCPGRARCG*SSPPTWSLCPG
Trigger: CCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCCAGGGCACACGGCGTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 72 bp CTCCTGCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTaGACTGATGGGCTGCGAAGGCATTTCCGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LLLSRASLQRSF*TDGLRRHFRVR
Trigger: CCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp GCTCTCTCGGGCCTCCCTCCAGCGCAGCTTCTGGACTaGTGGGCTGCGAAGGCATTTCCGGGTGCGGCACTT +
Preference number: 6 (lower is better)
Translates to: ALSGLPPAQLLD*WAAKAFPGAAL
Trigger: AAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp CCGGGAACTGCTTCACGTATCTCTCCCGGGACCTCATaGCCATGCCGCACGAGACGCTACAGGGCGACCAGG +
Preference number: 6 (lower is better)
Translates to: PGTASRISPGTS*PCRTRRYRATR
Trigger: CCTGGTCGCCCTGTAGCGTCTCGTGCGGCATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp GGGCCTCCCTCCAGCGCAGCTTCTGGACTGATGGGCTaGGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTT +
Preference number: 6 (lower is better)
Translates to: GPPSSAASGLMG*EGISGCGTSCV
Trigger: AACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp GCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTaGAGCATCCGCTGGCGGGTCCGCATGCCCTTCCCACAGGTCACG +
Preference number: 6 (lower is better)
Translates to: ACSRSSLQSPSSARD*SIRWRVRMPFPQVT
Trigger: CGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp GCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAGGCTaGACTCCGTGTATCCCTCACGCCGTGTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: AYRSQGRLPRGG*TPCIPHAVCPG
Trigger: CCCAGGGCACACGGCGTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAGGCGACCCTGACTTCTATAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS TCA 72 bp GGTCCTCGTTACAGTCACCCAGCTCTGCCAGAGATTTaGGCATCCGCTGGCGGGTCCGCATGCCCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: GPRYSHPALPEI*ASAGGSACPSH
Trigger: GTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp CGCCTGCTCCAGGTCCTCGTTACAGTCACCCAGCTCTaGCAGAGATTTGAGCATCCGCTGGCGGGTCCGCAT +
Preference number: 6 (lower is better)
Translates to: RLLQVLVTVTQL*QRFEHPLAGPH
Trigger: ATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACCTGGAGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp GATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTaGCGTTGCACAGTCTCTGGGCAGGGTACACCCCCA +
Preference number: 6 (lower is better)
Translates to: DGLRRHFRVRHF*RCTVSGQGTPP
Trigger: TGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp GGCCCACGTTCCAGTCTGGACTGGGGCCCATCATGGTaGGGAAGGACATCAAGTGGCGTGTCCTGTCCACTG +
Preference number: 6 (lower is better)
Translates to: GPRSSLDWGPSW*GRTSSGVSCPL
Trigger: CAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAACGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp CTCTTGGATCCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCTGTCCACGGGCGCATTCGACAGCCTGG +
Preference number: 6 (lower is better)
Translates to: LLDPTSAQFGAF*PGCPRAHSTAW
Trigger: CCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp CCAGCTGTGCCTTCAGCATGCGCTGCCGCATCCTCTTaGCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACC +
Preference number: 6 (lower is better)
Translates to: PAVPSACAAASS*PFHKWKSCRPT
Trigger: GGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp GTGGGCAGCATGCACACTGAGCCGTCTTCCGGGAACTaGTTCACGTATCTCTCCCGGGACCTCATGCCCATG +
Preference number: 6 (lower is better)
Translates to: VGSMHTEPSSGN*FTYLSRDLMPM
Trigger: CATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp ATGGGCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTaGGTTGCACAGTCTCTGGGCAGGGTACACCCCCAA +
Preference number: 6 (lower is better)
Translates to: MGCEGISGCGTS*VAQSLGRVHPQ
Trigger: TTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp GCTTCTGGACTGATGGGCTGCGAAGGCATTTCCGGGTaGGGCACTTCTTGCGTTGCACAGTCTCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ASGLMGCEGISG*GTSCVAQSLGR
Trigger: CCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCCCATCAGTCCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp GCATGCGCTGCCGCATCCTCTTGCCCTTTTCACAAGTaGAAGAGCTGCAGGCCGACCATGGGGACCAGTTGG +
Preference number: 6 (lower is better)
Translates to: ACAAASSCPFHK*KSCRPTMGTSW
Trigger: CCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp TCAGTCACCAGGCAGCTGCTAGGAGAGCACTCCTCGTaGACTGTGCACTTCTCCGTCTCCTCCGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SVTRQLLGEHSS*TVHFSVSSVGS
Trigger: GCTGCCCACGGAGGAGACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTCCTAGCAGCTGCCTGGTGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp GGCATCATGCATTTCTCCGCCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCGGGGCTCATCTTGACC +
Preference number: 6 (lower is better)
Translates to: GIMHFSACDVSA*HMEPSAGLILT
Trigger: GGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp GCTGCGAAGGCATTTCCGGGTGCGGCACTTCTTGCGTaGCACAGTCTCTGGGCAGGGTACACCCCCAAACTG +
Preference number: 6 (lower is better)
Translates to: AAKAFPGAALLA*HSLWAGYTPKL
Trigger: CAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp ACACTGAGGTCCAGCTGTGCCTTCAGCATGCGCTGCCGCATCCTCTaGCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATGGGGAC +
Preference number: 6 (lower is better)
Translates to: TLRSSCAFSMRCRIL*PFSQVEELQADHGD
Trigger: GTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp TGGCACTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTGCCTaGCACATGGAGCCGTCCGCGGGGCTCATCTTGACCATACGGTGC +
Preference number: 6 (lower is better)
Translates to: WHSGIMHFSACDVSA*HMEPSAGLILTIRC
Trigger: GCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp GCACTTCTCCGTCTCCTCCGTGGGCAGCATGCACACTaGGCCGTCTTCCGGGAACTGCTTCACGTATCTCTC +
Preference number: 6 (lower is better)
Translates to: ALLRLLRGQHAH*AVFRELLHVSL
Trigger: GAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGTGTGCATGCTGCCCACGGAGGAGACGGAGAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp CTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTTaGCCATACGGTGCCTCTTCTTCATACCCATCCCAC +
Preference number: 6 (lower is better)
Translates to: LPCTWSRPRGSS*PYGASSSYPSH
Trigger: GTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp CCGCTGTCAGTGCCAGCATCCCAGGGAATCAGGTCCTaGACTACTTTCTGGACCCAGCCACACTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: PLSVPASQGIRS*TTFWTQPHSLV
Trigger: CACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp CTCAGGCATCATGCATTTCTCCGCCTGCGATGTCTCTaGCTTGCACATGGAGCCGTCCGCGGGGCTCATCTT +
Preference number: 6 (lower is better)
Translates to: LRHHAFLRLRCL*LAHGAVRGAHL
Trigger: AAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp TGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCTGTCCACGGGCGCATTCGAC +
Preference number: 6 (lower is better)
Translates to: CSALGSHLRTVW*ILTRLSTGAFD
Trigger: GTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp CAGCCTGTCCCTGTTGGTGGCGCTATCCAAAACACCTaGATCCGTGTCCTCCTCCGAGGGGTGCTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: QPVPVGGAIQNT*IRVLLRGVLSV
Trigger: CACTGAAAGCACCCCTCGGAGGAGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CAA 90 bp TGCGATGTCTCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTaGACCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: CDVSALHMEPSAGLI*TIRCLFFIPIPQVA
Trigger: TGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp GGGACACTGAGGTCCAGCTGTGCCTTCAGCATGCGCTaGCGCATCCTCTTGCCCTTTTCACAAGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GTLRSSCAFSMR*RILLPFSQVEE
Trigger: CTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp ATGGTATGGCACTCAGGCATCATGCATTTCTCCGCCTaGGATGTCTCTGCCTTGCACATGGAGCCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: MVWHSGIMHFSA*DVSALHMEPSA
Trigger: CGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp GGGCGCGCAAGATGCGGCTGCAGTAGCCCTCCGACTTaGTCACTTTGTCCAGGGTCTCATCTGAGAAAGCTA +
Preference number: 6 (lower is better)
Translates to: GRARCGCSSPPT*SLCPGSHLRKL
Trigger: TAGCTTTCTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCATCTTGCGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 72 bp AGGAGCAGCCGAAAGTGTCACTCGGTAGCTGCTTCCTaGCTTATAGAAGTCAGGGTCGCCTTCCACGCGGAG +
Preference number: 6 (lower is better)
Translates to: RSSRKCHSVAAS*LIEVRVAFHAE
Trigger: CTCCGCGTGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCAGCTACCGAGTGACACTTTCGGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 72 bp CCATACGGTGCCTCTTCTTCATACCCATCCCACAGGTaGCACTGCAGTCGTCCCACTCACCCCACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: PYGASSSYPSHR*HCSRPTHPTQS
Trigger: TGACTGAGTGGGGTGAGTGGGACGACTGCAGTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp TCATGTAGCGCTCTTGGATCCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCTGTCCACGGGCGCATTC +
Preference number: 6 (lower is better)
Translates to: SCSALGSHLRTV*CILTRLSTGAF
Trigger: GAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGGATCCAAGAGCGCTACATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp TCTGCCTTGCACATGGAGCCGTCCGCGGGGCTCATCTaGACCATACGGTGCCTCTTCTTCATACCCATCCCA +
Preference number: 6 (lower is better)
Translates to: SALHMEPSAGLI*TIRCLFFIPIP
Trigger: TGGGATGGGTATGAAGAAGAGGCACCGTATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp CAGGGAATCAGGTCCTGCACTACTTTCTGGACCCAGCCACACTCCTaGGTGCACAGATCCTCTGCAGATAGGCCCACGTTCCAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: QGIRSCTTFWTQPHS*VHRSSADRPTFQSG
Trigger: TCCAGACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp AGGAGGGAGGAGCAGCCGAAAGTGTCACTCGGTAGCTaGTTCCTGGCTTATAGAAGTCAGGGTCGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: RREEQPKVSLGS*FLAYRSQGRLP
Trigger: TGGAAGGCGACCCTGACTTCTATAAGCCAGGAAGCAGCTACCGAGTGACACTTTCGGCTGCTCCTCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS GCA 72 bp CCTGCACTACTTTCTGGACCCAGCCACACTCCTTGGTaGACAGATCCTCTGCAGATAGGCCCACGTTCCAGT +
Preference number: 6 (lower is better)
Translates to: PALLSGPSHTPW*TDPLQIGPRSS
Trigger: ACTGGAACGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp GGACTGGGGCCCATCATGGTGAGGAAGGACATCAAGTaGCGTGTCCTGTCCACTGAGAATTCAGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: GLGPIMVRKDIK*RVLSTENSAEG
Trigger: ACCCTCAGCTGAATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp CCAGCATCCCAGGGAATCAGGTCCTGCACTACTTTCTaGACCCAGCCACACTCCTTGGTGCACAGATCCTCT +
Preference number: 6 (lower is better)
Translates to: PASQGIRSCTTF*TQPHSLVHRSS
Trigger: AGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTGATTCCCTGGGATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp GCCCTTTTCACAAGTGGAAGAGCTGCAGGCCGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: ALFTSGRAAGRP*GPVGVDAGFRG
Trigger: ACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp TTTCCGGGTGCGGCACTTCTTGCGTTGCACAGTCTCTaGGCAGGGTACACCCCCAAACTGAGGTTCCATTTG +
Preference number: 6 (lower is better)
Translates to: FPGAALLALHSL*AGYTPKLRFHL
Trigger: CAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp GCTTGTTTGGTGACTCATAGGTCACGCCGCTGTCAGTaGCAGCATCCCAGGGAATCAGGTCCTGCACTACTT +
Preference number: 6 (lower is better)
Translates to: ACLVTHRSRRCQ*QHPRESGPALL
Trigger: AAGTAGTGCAGGACCTGATTCCCTGGGATGCTGGCACTGACAGCGGCGTGACCTATGAGTCACCAAACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS GCA 72 bp ACAGCAAGCACGGGATGGTATGGCACTCAGGCATCATaGATTTCTCCGCCTGCGATGTCTCTGCCTTGCACA +
Preference number: 6 (lower is better)
Translates to: TASTGWYGTQAS*ISPPAMSLPCT
Trigger: TGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGATGCCTGAGTGCCATACCATCCCGTGCTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp TGTACTTGGCAGTTCCACAGGCGCAGCAGTCTAAGATaGGTCTGTCCGTCACCCCATCAAGTGTGGGATCCT +
Preference number: 6 (lower is better)
Translates to: CTWQFHRRSSLR*VCPSPHQVWDP
Trigger: AGGATCCCACACTTGATGGGGTGACGGACAGACCCATCTTAGACTGCTGCGCCTGTGGAACTGCCAAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CCA 72 bp GCTGCTCTCACATTGACAGGCTGCCAGGCTGGCCACTaGGCTTTGGCTTTGATGACAGTGAGGACTTCATCA +
Preference number: 6 (lower is better)
Translates to: AALTLTGCQAGH*ALALMTVRTSS
Trigger: TGATGAAGTCCTCACTGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp CTGTTCTCCCTTCCGGGCAATTCTCTCGATGACGACTCTGGCCACTaGTGTGATGGACCCACCTTCTGGGTCATAGAAAGGACTCTGAGG +
Preference number: 6 (lower is better)
Translates to: LFSLPGNSLDDDSGH*CDGPTFWVIERTLR
Trigger: CCTCAGAGTCCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCCGGAAGGGAGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp CGTTGCACAGTCTCTGGGCAGGGTACACCCCCAAACTaGGGTTCCATTTGGATTGTCCGGGTTCGAATCATG +
Preference number: 6 (lower is better)
Translates to: RCTVSGQGTPPN*GSIWIVRVRIM
Trigger: CATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp AATGCTGGCCTTCAGAATCACACAGCCTGTCCCTGTTaGTGGCGCTATCCAAAACACCTGGATCCGTGTCCT +
Preference number: 6 (lower is better)
Translates to: NAGLQNHTACPC*WRYPKHLDPCP
Trigger: AGGACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS CAA 72 bp CTTCCGGGCAATTCTCTCGATGACGACTCTGGCCACTaGTGTGATGGACCCACCTTCTGGGTCATAGAAAGG +
Preference number: 6 (lower is better)
Translates to: LPGNSLDDDSGH*CDGPTFWVIER
Trigger: CCTTTCTATGACCCAGAAGGTGGGTCCATCACACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp CTCTGGGCAGGGTACACCCCCAAACTGAGGTTCCATTaGGATTGTCCGGGTTCGAATCATGTGACCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LWAGYTPKLRFH*DCPGSNHVTFP
Trigger: GGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp TCGGATGAGTCTTCTCGGACCAGTTCCCATAAAACGTaGGTCTGTACTTGGCAGTTCCACAGGCGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: SDESSRTSSHKT*VCTWQFHRRSS
Trigger: ACTGCTGCGCCTGTGGAACTGCCAAGTACAGACTCACGTTTTATGGGAACTGGTCCGAGAAGACTCATCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS TCA 72 bp CCATTTTTACTGGTGAGCCCAGTTCAGCAACTTGCTTaGCCCCTTCGCTGGCATACCCTCCATACTCCCACA +
Preference number: 6 (lower is better)
Translates to: PFLLVSPVQQLA*PLRWHTLHTPT
Trigger: TGTGGGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS GCA 72 bp TCCTCCATTTTTACTGGTGAGCCCAGTTCAGCAACTTaGTTGACCCCTTCGCTGGCATACCCTCCATACTCC +
Preference number: 6 (lower is better)
Translates to: SSIFTGEPSSAT*LTPSLAYPPYS
Trigger: GGAGTATGGAGGGTATGCCAGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS GCA 72 bp AGCTGCAGGCCGACCATGGGGACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCATCTTCATCTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SCRPTMGTSWSR*RFQGCHLHLSL
Trigger: AAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp TCTTCTGGAGCCAGGTCGGCTACAATATCGTCCACGTaGTCAGGTACAATGTTGCACTGTTCTCCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SSGARSATISST*SGTMLHCSPFR
Trigger: CCGGAAGGGAGAACAGTGCAACATTGTACCTGACAACGTGGACGATATTGTAGCCGACCTGGCTCCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp GGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGTGACCTTTCCCACATG +
Preference number: 6 (lower is better)
Translates to: GRVHPQTEVPFG*SGFESCDLSHM
Trigger: CATGTGGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 90 bp CAGTCTCTGGGCAGGGTACACCCCCAAACTGAGGTTCCATTTGGATaGTCCGGGTTCGAATCATGTGACCTTTCCCACATGACTTGTTAC +
Preference number: 6 (lower is better)
Translates to: QSLGRVHPQTEVPFG*SGFESCDLSHMTCY
Trigger: GTAACAAGTCATGTGGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAGTTTGGGGGTGTACCCTGCCCAGAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp ATGACTTGTTACATTCAGACCACTGGGACCACTCGCTaGGTTCACAGTCAATGGGGCATTCTGGCAGCATGC +
Preference number: 6 (lower is better)
Translates to: MTCYIQTTGTTR*VHSQWGILAAC
Trigger: GCATGCTGCCAGAATGCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp GATTGTCCGGGTTCGAATCATGTGACCTTTCCCACATaGCTTGTTACATTCAGACCACTGGGACCACTCGCT +
Preference number: 6 (lower is better)
Translates to: DCPGSNHVTFPT*LVTFRPLGPLA
Trigger: AGCGAGTGGTCCCAGTGGTCTGAATGTAACAAGTCATGTGGGAAAGGTCACATGATTCGAACCCGGACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CAA 72 bp TCGGCTACAATATCGTCCACGTTGTCAGGTACAATGTaGCACTGTTCTCCCTTCCGGGCAATTCTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SATISSTLSGTM*HCSPFRAILSM
Trigger: CATCGAGAGAATTGCCCGGAAGGGAGAACAGTGCAACATTGTACCTGACAACGTGGACGATATTGTAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS CCA 72 bp CCCCATCAAGTGTGGGATCCTGTTCACACAGCTTCTTaGTCAGGGAGCCCTCGTCTTGAAAATAAATTATGC +
Preference number: 6 (lower is better)
Translates to: PHQVWDPVHTAS*SGSPRLENKLC
Trigger: GCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAGGATCCCACACTTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS TCA 72 bp ACTCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCT +
Preference number: 6 (lower is better)
Translates to: TLLSNFFLHFYW*AQFSNLLDPFA
Trigger: AGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046687.16
CDS TCA 72 bp TACCTGTTGTCGAATTTCTTCCTCCATTTTTACTGGTaGGCCCAGTTCAGCAACTTGCTTGACCCCTTCGCT +
Preference number: 6 (lower is better)
Translates to: YLLSNFFLHFYW*AQFSNLLDPFA
Trigger: AGCGAAGGGGTCAAGCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084696.6
CDS CAA 72 bp CTGTTCACACAGCTTCTTGGTCAGGGAGCCCTCGTCTaGAAAATAAATTATGCGTTTCTGTACAATGCTGGC +
Preference number: 6 (lower is better)
Translates to: LFTQLLGQGALV*KINYAFLYNAG
Trigger: GCCAGCATTGTACAGAAACGCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6
CDS GCA 72 bp CCTCGTCTTGAAAATAAATTATGCGTTTCTGTACAATaGTGGCCTTCAGAATCACACAGCCTGTCCCTGTTG +
Preference number: 6 (lower is better)
Translates to: PRLENKLCVSVQ*WPSESHSLSLL
Trigger: CAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTGTACAGAAACGCATAATTTATTTTCAAGACGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046687.16
ENSMUST00000084696.6