Pregenerated sensors for SPOCK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054162Ensembl transcript IDs: ENSMUST00000093480.6, ENSMUST00000117377.8, ENSMUST00000118003.8, ENSMUST00000119068.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAGGCACCATACAACATaGTCTCTAATTTCAATACCA | + |
|
Preference number: 2 (lower is better) Translates to: TQRWWYVKMSTQLINMLTRHHTT*SLISIP Trigger: TGGTATTGAAATTAGAGACCATGTTGTATGGTGCCT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTTTCTATATTCAGGCTaGAACCCATATGTGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: APYNMVSNFNTTNKNGMIFLYSG*NPYVFS Trigger: AGAAAACACATATGGGTTGCAGCCTGAATATAGAAA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTTTCTATATTCAGGCTaGAACCCATATGTGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TQRWWYVKMSTQLINMLTFLYSG*NPYVFS Trigger: AGAAAACACATATGGGTTGCAGCCTGAATATAGAAA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTTTCTATATTCAGGCTaGAACCCATATGTGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IIPSITSRLKRLPLSLTMFLYSG*NPYVFS Trigger: AGAAAACACATATGGGTTGCAGCCTGAATATAGAAA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTCGATGAAATTATTGTaGTTCAGGTCATTAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: TQRWWYVKMSTQLINMLTSMKLL*FRSLVT Trigger: GGTAACTAATGACCTGAACCACAATAATTTCATCGA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTCGATGAAATTATTGTaGTTCAGGTCATTAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: IIPSITSRLKRLPLSLTMSMKLL*FRSLVT Trigger: GGTAACTAATGACCTGAACCACAATAATTTCATCGA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGACCAACTATAAGTCTTaGGAAGATGCCAAATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IIPSITSRLKRLPLSLTMTNYKS*EDAKFE Trigger: TTCAAATTTGGCATCTTCCCAAGACTTATAGTTGGT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTACCAACTATAAGTCTTaGGAAGATGCCAAATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQRWWYVKMSTQLINMLTTNYKS*EDAKFE Trigger: TTCAAATTTGGCATCTTCCCAAGACTTATAGTTGGT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTACCAACTATAAGTCTTaGGAAGATGCCAAATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: APYNMVSNFNTTNKNGMITNYKS*EDAKFE Trigger: TTCAAATTTGGCATCTTCCCAAGACTTATAGTTGGT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGAGGTTTAGAACCACTTaGTTTAGGGATAAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IIPSITSRLKRLPLSLTMRFRTT*FRDKKE Trigger: TTCCTTCTTATCCCTAAACAAAGTGGTTCTAAACCT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAGGTTTAGAACCACTTaGTTTAGGGATAAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TQRWWYVKMSTQLINMLTRFRTT*FRDKKE Trigger: TTCCTTCTTATCCCTAAACAAAGTGGTTCTAAACCT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTCACCGCCGCGGCAGCTaGAAGAGTCTGGCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIHRRGS*KSLAAP Trigger: TGGTGCAGCCAGACTCTTGCAGCTGCCGCGGCGGTG...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCACCGCCGCGGCAGCTaGAAGAGTCTGGCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTHRRGS*KSLAAP Trigger: TGGTGCAGCCAGACTCTTGCAGCTGCCGCGGCGGTG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGCAGCTGCAAGAGTCTaGCTGCACCAAGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIAAARV*LHQAAA Trigger: TGCAGCGGCTTGGTGCAGCCAGACTCTTGCAGCTGC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGCAGCTGCAAGAGTCTaGCTGCACCAAGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMAAARV*LHQAAA Trigger: TGCAGCGGCTTGGTGCAGCCAGACTCTTGCAGCTGC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTCTCATGAAGGGCCTTaGACCAGTCTCGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMISHEGP*TSLAVC Trigger: ACAGACTGCGAGACTGGTTCAAGGCCCTTCATGAGA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTCTCATGAAGGGCCTTaGACCAGTCTCGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMSHEGP*TSLAVC Trigger: ACAGACTGCGAGACTGGTTCAAGGCCCTTCATGAGA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTCTCATGAAGGGCCTTaGACCAGTCTCGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTSHEGP*TSLAVC Trigger: ACAGACTGCGAGACTGGTTCAAGGCCCTTCATGAGA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTGGCTTCCACTCTCATaGAGGGCCTTGAACCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMWLPLS*RALNQS Trigger: AGACTGGTTCAAGGCCCTTCATGAGAGTGGAAGCCA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTGGCTTCCACTCTCATaGAGGGCCTTGAACCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTWLPLS*RALNQS Trigger: AGACTGGTTCAAGGCCCTTCATGAGAGTGGAAGCCA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTCAACACACCAGCACTaGCCTACACTGCCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMISTHQH*PTLPWH Trigger: ATGCCATGGCAGTGTAGGGCAGTGCTGGTGTGTTGA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTCAACACACCAGCACTaGCCTACACTGCCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMSTHQH*PTLPWH Trigger: ATGCCATGGCAGTGTAGGGCAGTGCTGGTGTGTTGA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTTACTGAGCTCCGTGTaGCAAGGTGGGTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMLLSSV*QGGSCC Trigger: ACAGCAAGACCCACCTTGCCACACGGAGCTCAGTAA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTTACTGAGCTCCGTGTaGCAAGGTGGGTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMILLSSV*QGGSCC Trigger: ACAGCAAGACCCACCTTGCCACACGGAGCTCAGTAA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTTACTGAGCTCCGTGTaGCAAGGTGGGTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTLLSSV*QGGSCC Trigger: ACAGCAAGACCCACCTTGCCACACGGAGCTCAGTAA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGTGACTGATACACAGTaGAGTCTGAGCATCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIVTDTQ*SLSILR Trigger: ACGCAGGATGCTCAGACTGCACTGTGTATCAGTCAC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGTGACTGATACACAGTaGAGTCTGAGCATCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMVTDTQ*SLSILR Trigger: ACGCAGGATGCTCAGACTGCACTGTGTATCAGTCAC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAGCACTGCCCTACACTaGCATGGCATTGTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTSTALH*HGIVLV Trigger: AACCAACACAATGCCATGGCAGTGTAGGGCAGTGCT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTATACACAGTGCAGTCTaGGCATCCTGCGTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIIHSAV*ASCVMQ Trigger: TTGCATTACGCAGGATGCTCAGACTGCACTGTGTAT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGATACACAGTGCAGTCTaGGCATCCTGCGTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMIHSAV*ASCVMQ Trigger: TTGCATTACGCAGGATGCTCAGACTGCACTGTGTAT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTATACACAGTGCAGTCTaGGCATCCTGCGTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTIHSAV*ASCVMQ Trigger: TTGCATTACGCAGGATGCTCAGACTGCACTGTGTAT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGTCTCGCAGTCTGTTTaGCACTTCTCTGAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIVSQSV*HFSEFQ Trigger: CTGGAATTCAGAGAAGTGGCAAACAGACTGCGAGAC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGTCTCGCAGTCTGTTTaGCACTTCTCTGAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMVSQSV*HFSEFQ Trigger: CTGGAATTCAGAGAAGTGGCAAACAGACTGCGAGAC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGTCTCGCAGTCTGTTTaGCACTTCTCTGAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTVSQSV*HFSEFQ Trigger: CTGGAATTCAGAGAAGTGGCAAACAGACTGCGAGAC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCTTATCGGAGGGACATaGGCAACGTCCTTCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTLIGGT*ATSFTF Trigger: AAATGTGAAGGACGTTGCCCATGTCCCTCCGATAAG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGACTGAGAGATTGTCGTaGGCCATTGTTTTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMTERLS*AIVFRP Trigger: TGGACGAAAAACAATGGCTCACGACAATCTCTCAGT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTACTGAGAGATTGTCGTaGGCCATTGTTTTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTTERLS*AIVFRP Trigger: TGGACGAAAAACAATGGCTCACGACAATCTCTCAGT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTACTGAGAGATTGTCGTaGGCCATTGTTTTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMITERLS*AIVFRP Trigger: TGGACGAAAAACAATGGCTCACGACAATCTCTCAGT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGACTTCCTTGTCATACTaGGAGATTGTCGTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMTSLSY*EIVVSH Trigger: ATGGCTCACGACAATCTCTCAGTATGACAAGGAAGT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTACTTCCTTGTCATACTaGGAGATTGTCGTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMITSLSY*EIVVSH Trigger: ATGGCTCACGACAATCTCTCAGTATGACAAGGAAGT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGAAGTGTCACAAGAATTaGAGAACGCCTTGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMKCHKN*RTPWCT Trigger: AGTGCACCAAGGCGTTCTTCAATTCTTGTGACACTT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAAGTGTCACAAGAATTaGAGAACGCCTTGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTKCHKN*RTPWCT Trigger: AGTGCACCAAGGCGTTCTTCAATTCTTGTGACACTT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTCTCAGGCCTCAGCAATaGTTTTGTCTTCTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMILRPQQ*FCLLVL Trigger: CAGAACAAGAAGACAAAAGCATTGCTGAGGCCTGAG...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGCTCAGGCCTCAGCAATaGTTTTGTCTTCTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMLRPQQ*FCLLVL Trigger: CAGAACAAGAAGACAAAAGCATTGCTGAGGCCTGAG...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTACTGGTATCAAATCTaGTTCTCTCAGGCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMYWYQI*FSQASA Trigger: TGCTGAGGCCTGAGAGAAGCAGATTTGATACCAGTA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTCCTCTCCATTGCTTATaGCTTCCTCCTACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIPLHCL*LPPTSF Trigger: GAAAGAAGTAGGAGGAAGCCATAAGCAATGGAGAGG...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGCCTCTCCATTGCTTATaGCTTCCTCCTACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMPLHCL*LPPTSF Trigger: GAAAGAAGTAGGAGGAAGCCATAAGCAATGGAGAGG...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCCTCTCCATTGCTTATaGCTTCCTCCTACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTPLHCL*LPPTSF Trigger: GAAAGAAGTAGGAGGAAGCCATAAGCAATGGAGAGG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGCAGGATCTAAAGCTTaGTCAAATGGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMAGSKA*SNGFPG Trigger: TCCAGGAAAACCATTTGATCAAGCTTTAGATCCTGC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGCAGGATCTAAAGCTTaGTCAAATGGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTAGSKA*SNGFPG Trigger: TCCAGGAAAACCATTTGATCAAGCTTTAGATCCTGC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCCTAAGACACATGCCTaGTATTCTAGTTTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTPKTHA*YSSLHC Trigger: ACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGCCTAAGACACATGCCTaGTATTCTAGTTTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMPKTHA*YSSLHC Trigger: ACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGG...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAAACATCCAGCCAAGTaGATCCTTGCAAATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTKHPAK*ILANWQ Trigger: TTGCCAATTTGCAAGGATTCACTTGGCTGGATGTTT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGAAACATCCAGCCAAGTaGATCCTTGCAAATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMKHPAK*ILANWQ Trigger: TTGCCAATTTGCAAGGATTCACTTGGCTGGATGTTT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTAAACTTTGTGGCGGCTaGATTTCGTCTTTAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIKLCGG*ISSLSM Trigger: CATGCTTAAAGACGAAATGCAGCCGCCACAAAGTTT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTCTTATCAAGGTATATaGTCCCAAGCTCTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMISYQGI*SQALTG Trigger: ACCAGTCAGAGCTTGGGAGCATATACCTTGATAAGA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTCTTATCAAGGTATATaGTCCCAAGCTCTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTSYQGI*SQALTG Trigger: ACCAGTCAGAGCTTGGGAGCATATACCTTGATAAGA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTAACGCCTTGGTGCACTaGTCATTCTTATCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMINALVH*SFLSRY Trigger: ATACCTTGATAAGAATGAGCAGTGCACCAAGGCGTT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAACGCCTTGGTGCACTaGTCATTCTTATCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTNALVH*SFLSRY Trigger: ATACCTTGATAAGAATGAGCAGTGCACCAAGGCGTT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGAACGCCTTGGTGCACTaGTCATTCTTATCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMNALVH*SFLSRY Trigger: ATACCTTGATAAGAATGAGCAGTGCACCAAGGCGTT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTTCCTGGATTCCAAGTaGGGAAATAATCATCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIFLDSK*GNNHRL Trigger: GAGACGATGATTATTTCCGCACTTGGAATCCAGGAA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117377.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGCCATGGCATTGTGTTaGTTTGTAGTAACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTAMALC*FVVTIF Trigger: GAAGATGGTTACTACAAACCAACACAATGCCATGGC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CCA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGCCATGGCATTGTGTTaGTTTGTAGTAACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIPSITSRLKRLPLSLTMAMALC*FVVTIF Trigger: GAAGATGGTTACTACAAACCAACACAATGCCATGGC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTTCCTGGATTCCAAGTaGGGAAATAATCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQRWWYVKMSTQLINMLTFLDSK*GNNHPL Trigger: TAGAGGATGATTATTTCCGCACTTGGAATCCAGGAA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093480.6 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTTCCTGGATTCCAAGTaGGGAAATAATCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: APYNMVSNFNTTNKNGMIFLDSK*GNNHPL Trigger: TAGAGGATGATTATTTCCGCACTTGGAATCCAGGAA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093480.6 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 90 bp | ACTGTCCTAGGAGCTTCTTTATCCCCTGTCGCTTCTGAATGTTACTaGGCTCCGTGTGGCAAGGTGGGTCTTGCTGTCTCTGGAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVLGASLSPVASECY*APCGKVGLAVSGNS Trigger: ACTGTTTCCAGAGACAGCAAGACCCACCTTGCCACACGGAGCTCAGTAACATTCAGAAGCGACAGGGGATAAAGAAGCTCCTAGGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 90 bp | AGTGGAATGTACTGTCCTAGGAGCTTCTTTATCCCCTGTCGCTTCTaGATGTTACTGAGCTCCGTGTGGCAAGGTGGGTCTTGCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGMYCPRSFFIPCRF*MLLSSVWQGGSCCL Trigger: GAGACAGCAAGACCCACCTTGCCACACGGAGCTCAGTAACATTCAGAAGCGACAGGGGATAAAGAAGCTCCTAGGACAGTACATTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 90 bp | ATTTGTTCCACTGTCCGACTTCCTTGTCATACTGAGAGATTGTCGTaGGCCATTGTTTTTCGTCCAGAAAATTACCGCCGTCCGACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICSTVRLPCHTERLS*AIVFRPENYRRPTA Trigger: GGCGGTCGGACGGCGGTAATTTTCTGGACGAAAAACAATGGCTCACGACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGCGGGAGACCTCTCCATaGCTTATGGCTTCCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMRETSP*LMASSY Trigger: GTAGGAGGAAGCCATAAGCAATGGAGAGGTCTCCCG...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCGGGAGACCTCTCCATaGCTTATGGCTTCCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTRETSP*LMASSY Trigger: GTAGGAGGAAGCCATAAGCAATGGAGAGGTCTCCCG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTCGGGAGACCTCTCCATaGCTTATGGCTTCCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIRETSP*LMASSY Trigger: GTAGGAGGAAGCCATAAGCAATGGAGAGGTCTCCCG...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGTGGCAAGGTGGGTCTaGCTGTCTCTGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMVARWV*LSLETV Trigger: TACTGTTTCCAGAGACAGCAAGACCCACCTTGCCAC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGTGGCAAGGTGGGTCTaGCTGTCTCTGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTVARWV*LSLETV Trigger: TACTGTTTCCAGAGACAGCAAGACCCACCTTGCCAC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGTGGCAAGGTGGGTCTaGCTGTCTCTGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIVARWV*LSLETV Trigger: TACTGTTTCCAGAGACAGCAAGACCCACCTTGCCAC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTTSSRN*FHCPTS Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093480.6 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMITSSRN*FHCPTS Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093480.6 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTSSSRN*FHCPTS Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117377.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGCCTCAGCAATGCTTTaGTCTTCTTGTTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMASAML*SSCSGF Trigger: GAAGCCAGAACAAGAAGACAAAAGCATTGCTGAGGC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGCCTCAGCAATGCTTTaGTCTTCTTGTTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIASAML*SSCSGF Trigger: GAAGCCAGAACAAGAAGACAAAAGCATTGCTGAGGC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTGAATTGAAGAACGCCTaGGTGCACTGCTCATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIELKNA*VHCSFL Trigger: TAAGAATGAGCAGTGCACCAAGGCGTTCTTCAATTC...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGAATTGAAGAACGCCTaGGTGCACTGCTCATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTELKNA*VHCSFL Trigger: TAAGAATGAGCAGTGCACCAAGGCGTTCTTCAATTC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGGAATTGAAGAACGCCTaGGTGCACTGCTCATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMELKNA*VHCSFL Trigger: TAAGAATGAGCAGTGCACCAAGGCGTTCTTCAATTC...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTACACTGCCATGGCATaGTGTTGGTTTGTAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIYTAMA*CWFVVT Trigger: GGTTACTACAAACCAACACAATGCCATGGCAGTGTA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTACACTGCCATGGCATaGTGTTGGTTTGTAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTYTAMA*CWFVVT Trigger: GGTTACTACAAACCAACACAATGCCATGGCAGTGTA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTACACTGCCATGGCATaGTGTTGGTTTGTAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMYTAMA*CWFVVT Trigger: GGTTACTACAAACCAACACAATGCCATGGCAGTGTA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGAATGCTTTTGTCTTCTaGTTCTGGCTTCCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMNAFVF*FWLPLS Trigger: TGAGAGTGGAAGCCAGAACAAGAAGACAAAAGCATT...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTAATGCTTTTGTCTTCTaGTTCTGGCTTCCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTNAFVF*FWLPLS Trigger: TGAGAGTGGAAGCCAGAACAAGAAGACAAAAGCATT...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTTGCCATGGCATTGTGTaGGTTTGTAGTAACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTCHGIV*VCSNHL Trigger: AAGATGGTTACTACAAACCAACACAATGCCATGGCA...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGTGCCATGGCATTGTGTaGGTTTGTAGTAACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMCHGIV*VCSNHL Trigger: AAGATGGTTACTACAAACCAACACAATGCCATGGCA...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTTGCCATGGCATTGTGTaGGTTTGTAGTAACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMICHGIV*VCSNHL Trigger: AAGATGGTTACTACAAACCAACACAATGCCATGGCA...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCAGTATAACTTCACGATTGAAAAGATTACCACTTTCTCTTACCATGCAACGTCCTTCACATTaGATAGAGATCTGTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IIPSITSRLKRLPLSLTMQRPSH*IEICFP Trigger: AGGAAAACAGATCTCTATCAAATGTGAAGGACGTTG...CATGGTAAGAGAAAGTGGTAATCTTTTCAATCGTGAAGTTATACTGGGTATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATACAACATGGTCTCTAATTTCAATACCACTAACAAAAATGGCATGATTCAACGTCCTTCACATTaGATAGAGATCTGTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: APYNMVSNFNTTNKNGMIQRPSH*IEICFP Trigger: AGGAAAACAGATCTCTATCAAATGTGAAGGACGTTG...AATCATGCCATTTTTGTTAGTGGTATTGAAATTAGAGACCATGTTGTATGGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTCAACGTCCTTCACATTaGATAGAGATCTGTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTQRPSH*IEICFP Trigger: AGGAAAACAGATCTCTATCAAATGTGAAGGACGTTG...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGTGGTGGTATGTCAAAATGTCTACACAATTAATTAACATGCTAACTGTGAATCCTTGCAAATaGGCAAAATACTGGTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQRWWYVKMSTQLINMLTVNPCK*AKYWYQ Trigger: TTGATACCAGTATTTTGCCAATTTGCAAGGATTCAC...AGTTAGCATGTTAATTAATTGTGTAGACATTTTGACATACCACCACCTTTGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 72 bp | GCTGGCATAGGCGATAGGGCATGGCTTGCAGGTAGATaGCGGGAGACCTCTCCATTGCTTATGGCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGIGDRAWLAGR*RETSPLLMASS Trigger: GGAGGAAGCCATAAGCAATGGAGAGGTCTCCCGTCATCTACCTGCAAGCCATGCCCTATCGCCTATGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS GCA 72 bp | CTCATGAAGGGCCTTGAACCAGTCTCGCAGTCTGTTTaGCACTTCTCTGAATTCCAGGTCACTGCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LMKGLEPVSQSV*HFSEFQVTAGS Trigger: AGAGCCTGCAGTGACCTGGAATTCAGAGAAGTGGCAAACAGACTGCGAGACTGGTTCAAGGCCCTTCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 72 bp | TACTGTCCTAGGAGCTTCTTTATCCCCTGTCGCTTCTaGATGTTACTGAGCTCCGTGTGGCAAGGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: YCPRSFFIPCRF*MLLSSVWQGGS Trigger: AGACCCACCTTGCCACACGGAGCTCAGTAACATTCAGAAGCGACAGGGGATAAAGAAGCTCCTAGGACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS GCA 72 bp | CATACTGTGTGTGAGCCTCCGGTGACTGATACACAGTaGAGTCTGAGCATCCTGCGTAATGCAAACTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HTVCEPPVTDTQ*SLSILRNANFV Trigger: CACAAAGTTTGCATTACGCAGGATGCTCAGACTGCACTGTGTATCAGTCACCGGAGGCTCACACACAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS CCA 72 bp | TTGCAGGTAGATGACGGGAGACCTCTCCATTGCTTATaGCTTCCTCCTACTTCTTTCATACTGTGTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVDDGRPLHCL*LPPTSFILCVS Trigger: GCTCACACACAGTATGAAAGAAGTAGGAGGAAGCCATAAGCAATGGAGAGGTCTCCCGTCATCTACCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS CAA 72 bp | GACTTCCTTGTCATACTGAGAGATTGTCGTGAGCCATaGTTTTTCGTCCAGAAAATTACCGCCGTCCGACCG | + |
|
Preference number: 6 (lower is better) Translates to: DFLVILRDCREP*FFVQKITAVRP Trigger: CGGTCGGACGGCGGTAATTTTCTGGACGAAAAACAATGGCTCACGACAATCTCTCAGTATGACAAGGAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 72 bp | ACTGTCCGACTTCCTTGTCATACTGAGAGATTGTCGTaGGCCATTGTTTTTCGTCCAGAAAATTACCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TVRLPCHTERLS*AIVFRPENYRR Trigger: ACGGCGGTAATTTTCTGGACGAAAAACAATGGCTCACGACAATCTCTCAGTATGACAAGGAAGTCGGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS TCA 72 bp | CGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTaGGAGATTGTCGTGAGCCATTGTTTTTCGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNLFHCPTSLSY*EIVVSHCFSSR Trigger: TCTGGACGAAAAACAATGGCTCACGACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAATTCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS GCA 72 bp | TCTGTTTTCCTAAGACACATGCCTGATATTCTAGTTTaGACTGTGAAGAGTAGGAATGCCCATCAGAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVFLRHMPDILV*TVKSRNAHQNH Trigger: GTGGTTCTGATGGGCATTCCTACTCTTCACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGGAAAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS CCA 72 bp | ATTTCTGCCTATGTTCATGGACTTATCGGAGGGACATaGGCAACGTCCTTCACATTTGATAGAGATCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISAYVHGLIGGT*ATSFTFDRDLF Trigger: AAACAGATCTCTATCAAATGTGAAGGACGTTGCCCATGTCCCTCCGATAAGTCCATGAACATAGGCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS GCA 72 bp | ACCTTCATCATCAGTCCATTCACGAAAATCTCCACTTaGGAAATCTCCAGATATCTCAAAGTCTATAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFIISPFTKIST*EISRYLKVYST Trigger: TGTGCTATAGACTTTGAGATATCTGGAGATTTCGCAAGTGGAGATTTTCGTGAATGGACTGATGATGAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093480.6 ENSMUST00000117377.8 ENSMUST00000118003.8 ENSMUST00000119068.8 |
||
| CDS GCA 72 bp | CTAAAGCTTGATCAAATGGTTTTCCTGGATTCCAAGTaGGGAAATAATCATCGTCTCGGAATTTGTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LKLDQMVFLDSK*GNNHRLGICST Trigger: AGTGGAACAAATTCCGAGACGATGATTATTTCCGCACTTGGAATCCAGGAAAACCATTTGATCAAGCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117377.8 |
||