Pregenerated sensors for SPOCK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058297Ensembl transcript IDs: ENSMUST00000121820.9, ENSMUST00000165024.3
Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGGGGGCTGGAGCAAGGCAGACCTGTGCCCACCCATCACACGTaGTCACGACTCCTGTGGAACACTGGGGGTAAGATGTCCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GRGLEQGRPVPTHHT*SRLLWNTGGKMSQD Trigger: GTCCTGGGACATCTTACCCCCAGTGTTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCCAGCCCCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR CCA 90 bp | CTCTCCTGCCCGCAACAAGGGAACGGGAGCAGGCAGGAACACGGATaGAGGAACTGGGCAGGCAGCTTATTCAAGGATGAGGCCCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LSCPQQGNGSRQEHG*RNWAGSLFKDEARR Trigger: CCTGCGGGCCTCATCCTTGAATAAGCTGCCTGCCCAGTTCCTCCATCCGTGTTCCTGCCTGCTCCCGTTCCCTTGTTGCGGGCAGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR GCA 90 bp | GTACCAACAGAAACCAAGGGAGGGGGCTGGAGCAAGGCAGACCTGTaGCCACCCATCACACGTGGTCACGACTCCTGTGGAACACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: VPTETKGGGWSKADL*PPITRGHDSCGTLG Trigger: CCCCAGTGTTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCCAGCCCCCTCCCTTGGTTTCTGTTGGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR GCA 90 bp | GGGCGTGGCGCAGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATaGTTGAGTGCCCACCAACGCACACACGGGTCTAACACTTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: GRGAEEGERMGSPTG*LSAHQRTHGSNTCS Trigger: TGAACAAGTGTTAGACCCGTGTGTGCGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCTGCGCCACGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR CCA 90 bp | TGGCTGAGAGGACTAAGGCTTTGGGGCCTCTCCTCCAGGACCTTCTaGGCACAGGAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: WLRGLRLWGLSSRTF*AQEVTAPRGSSQGS Trigger: AGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCCTGTGCCCAGAAGGTCCTGGAGGAGAGGCCCCAAAGCCTTAGTCCTCTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR CCA 90 bp | CCGCAACAAGGGAACGGGAGCAGGCAGGAACACGGATGGAGGAACTaGGCAGGCAGCTTATTCAAGGATGAGGCCCGCAGGACCGACAAT | + |
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Preference number: 1 (lower is better) Translates to: PQQGNGSRQEHGWRN*AGSLFKDEARRTDN Trigger: ATTGTCGGTCCTGCGGGCCTCATCCTTGAATAAGCTGCCTGCCCAGTTCCTCCATCCGTGTTCCTGCCTGCTCCCGTTCCCTTGTTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR TCA 90 bp | GTGGCGCAGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATGCTTaGGTGCCCACCAACGCACACACGGGTCTAACACTTGTTCAGATT | + |
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Preference number: 1 (lower is better) Translates to: VAQRKGKEWGHPRDA*VPTNAHTGLTLVQI Trigger: AATCTGAACAAGTGTTAGACCCGTGTGTGCGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCTGCGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR GCA 90 bp | TGCCGTAATTTGGTTGAACTCTTTCCAACACAGCCCTACCTCTCCTaGCCGCAACAAGGGAACGGGAGCAGGCAGGAACACGGATGGAGG | + |
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Preference number: 1 (lower is better) Translates to: CRNLVELFPTQPYLS*PQQGNGSRQEHGWR Trigger: CCTCCATCCGTGTTCCTGCCTGCTCCCGTTCCCTTGTTGCGGGCAGGAGAGGTAGGGCTGTGTTGGAAAGAGTTCAACCAAATTACGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR CCA 90 bp | CAGATAAAAGCCAAATGGGTACCAACAGAAACCAAGGGAGGGGGCTaGAGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGAC | + |
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Preference number: 1 (lower is better) Translates to: QIKAKWVPTETKGGG*SKADLCPPITRGHD Trigger: GTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCCAGCCCCCTCCCTTGGTTTCTGTTGGTACCCATTTGGCTTTTATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR TCA 90 bp | CGGGCTGAGAAGCGGGTAGCTCTGCCTGACTTGGTACGGATGTCTTaGATCTCCTTTTGCACCCCCAGGTCTTTCCCTAGGACAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: RAEKRVALPDLVRMS*ISFCTPRSFPRTTA Trigger: TGCAGTTGTCCTAGGGAAAGACCTGGGGGTGCAAAAGGAGATTCAAGACATCCGTACCAAGTCAGGCAGAGCTACCCGCTTCTCAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR CCA 90 bp | CCTAAAATCCTTCACAGCTACCCGGGGATGTTCTGGAAATCCAGCTaGGGCAGAGAAAGAATCAGACTCCATCCTAGCGAGAGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PKILHSYPGMFWKSS*GRERIRLHPSESRK Trigger: CTTCCTGCTCTCGCTAGGATGGAGTCTGATTCTTTCTCTGCCCCAGCTGGATTTCCAGAACATCCCCGGGTAGCTGTGAAGGATTTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR CCA 90 bp | AGGGCTTTAAATAGAGTCTGGGGCATGGTTCTTCTAGGGCCATCTTaGGGACCCTTGAGACAGAGGAAAGTCATGGCTGAGAGGACTAAG | + |
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Preference number: 1 (lower is better) Translates to: RALNRVWGMVLLGPS*GPLRQRKVMAERTK Trigger: CTTAGTCCTCTCAGCCATGACTTTCCTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGAACCATGCCCCAGACTCTATTTAAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR CCA 90 bp | GGATGGGAGCAGGTGACAGTCACCCGGAGAGTCAGAACTGTGTCGTaGAATGAGAAGCACTTTATGGAGCTTGGTGACATTTCCGTATTC | + |
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Preference number: 1 (lower is better) Translates to: GWEQVTVTRRVRTVS*NEKHFMELGDISVF Trigger: GAATACGGAAATGTCACCAAGCTCCATAAAGTGCTTCTCATTCCACGACACAGTTCTGACTCTCCGGGTGACTGTCACCTGCTCCCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR GCA 90 bp | TCAGTGTGGTCCCCTCTGATAGATACACCGTTCTCTATTCATATATaGTATAGGGCTTTAAATAGAGTCTGGGGCATGGTTCTTCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SVWSPLIDTPFSIHI*YRALNRVWGMVLLG Trigger: CCCTAGAAGAACCATGCCCCAGACTCTATTTAAAGCCCTATAGCATATATGAATAGAGAACGGTGTATCTATCAGAGGGGACCACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCGGGTCAGGGAGAAGGTaGGCAGACACGGGCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GRAGQGERRGCVFLYTTPGSGRR*ADTGCL Trigger: CAAGCAGCCCGTGTCTGCTCACCTTCTCCCTGACCC...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGCAGCTTTCAGCTGCCTaGCCTCCCTCCCTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGQLSAA*PPSLSL Trigger: CAGGGAGAGGGAGGGAGGGCAGGCAGCTGAAAGCTG...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCGGGCGTGCTGAGGCATaGCATCAGGGCCTAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TQGAALTLPGHQGGPRVFGRAEA*HQGLAA Trigger: AGCAGCTAGGCCCTGATGCCATGCCTCAGCACGCCC...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCACCCTTCCACCCGGCCTaGAGGTCTGAGGGCGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGLCPGSLSTRSPVASCPPFHPA*RSEGVL Trigger: CAGCACGCCCTCAGACCTCCAGGCCGGGTGGAAGGG...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTTTCCAGGTGTTGGGCTaGGGGGCAGGATCAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: GSHSSPWFLTRVSGTRPSFQVLG*GAGSGT Trigger: TGTCCCTGATCCTGCCCCTCAGCCCAACACCTGGAA...AGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTACGCTCAGCTTTCAGCTaGCTGCCCTCCCTCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EVTAPRGSSQGSRGHALLRSAFS*LPSLPL Trigger: GAGAGGGAGGGAGGGCAGGCAGCTGAAAGCTGAGCG...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACTGAGCCAGGGACCAGAGGATGGTTGCAGAGGTCTGAGGAAGGGAGGGAGCACCACACAGGGGGCTaGCCTCACTCTTCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VTEPGTRGWLQRSEEGREHHTGG*PHSSWA Trigger: TGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGTGGTG...CTCCCTCCCTTCCTCAGACCTCTGCAACCATCCTCTGGTCCCTGGCTCAGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCCAAGGAAATTTCCTTTaGGAGGGGGAAGTGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GRAGQGERRGCVFLYTTPQGNFL*EGEVGS Trigger: GCTCCCCACTTCCCCCTCTCAAAGGAAATTTCCTTG...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGACCAGCCAGTGCCCCTaGGAGGCTGGGGGAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRMQRADVTEPGTRGWLQTSQCP*EAGGEP Trigger: TGGCTCTCCCCCAGCCTCTCAGGGGCACTGGCTGGT...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGAGCCAGGGACCAGAGGATGGTTGCAGAGGTCTGAGGAAGGGAGGGAGGAGGATGGGAGCAGGTaGCAGTCACCCGGAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VTEPGTRGWLQRSEEGREEDGSR*QSPGES Trigger: TGACTCTCCGGGTGACTGTCACCTGCTCCCATCCTC...CTCCCTCCCTTCCTCAGACCTCTGCAACCATCCTCTGGTCCCTGGCTCAGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGTGTCCAGGTCTCTTCTaGCCTGTCTTTCTGGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGCPGLF*PVFLAV Trigger: GACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACA...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCATGGTTCTTCTAGGGCCATCTTGGGGACCCTTGAGACAGAGGAAAGTCCCAGTCCTCCCCCACTaGAGCCAGGGTCCTCCGCAC | + |
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Preference number: 2 (lower is better) Translates to: WGMVLLGPSWGPLRQRKVPVLPH*SQGPPH Trigger: GTGCGGAGGACCCTGGCTCCAGTGGGGGAGGACTGG...GACTTTCCTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGAACCATGCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGCCCTTCCACCCGGCCTaGAGGTCTGAGGGCGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SRMQRADVTEPGTRGWLQPFHPA*RSEGVL Trigger: CAGCACGCCCTCAGACCTCCAGGCCGGGTGGAAGGG...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTGGAATGCTTGCTGGTCCTCTaGTCCTTGGGACAAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GARQTCAHPSHVVTTPVECLLVL*SLGQGG Trigger: TCCCCCTTGTCCCAAGGAGCAGAGGACCAGCAAGCA...TTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCATGTCCAGGTCTCTTCTaGCCTGTCTTTCTGGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LGLCPGSLSTRSPVASCPCPGLF*PVFLAV Trigger: GACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACA...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGCAAATCAGCCCAATTTaGGGAGGACGCTCAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGQISPI*GGRSAF Trigger: GAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTG...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR CAA 90 bp | GTCCTCCGCACTGACTTCCGGATCCATTTGCTAAGTTGCCTGCTGTaGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: VLRTDFRIHLLSCLL*SRSLLACLSGRRHP Trigger: AGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGCAGGCAACTTAGCAAATGGATCCGGAAGTCAGTGCGGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTATTGGTCGGGGCAAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGCAGACACGGGCTGCTTaGTGGTCCTCTGCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PSIGRGKREPFPRGSGRRQTRAA*WSSAPW Trigger: CCAAGGAGCAGAGGACCAGCAAGCAGCCCGTGTCTG...CCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTTGCCCCGACCAATAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCATCACCACAAGACCGTaGTGGGGCTTTCATATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRAGQGERRGCVFLYTTPITTRP*WGFHIK Trigger: TTTGATATGAAAGCCCCACCACGGTCTTGTGGTGAT...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATGCTTGAGTGCCCACCAACGCCAGGGACCAGAGGATaGTTGCAGAGGTCTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RGRGKNGVTHGMLECPPTPGTRG*LQRSEE Trigger: TTCCTCAGACCTCTGCAACCATCCTCTGGTCCCTGG...CGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTATTCTGCCTCTTCTGCTaGGCTATCTCTGGTTACTCG | + |
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Preference number: 2 (lower is better) Translates to: EVTAPRGSSQGSRGHALLFCLFC*AISGYS Trigger: CGAGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAA...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCACCACAAGACCGTGGTaGGGCTTTCATATCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: TQGAALTLPGHQGGPRVFTTRPW*GFHIKS Trigger: TGATTTGATATGAAAGCCCCACCACGGTCTTGTGGT...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGACCACAAGACCGTGGTaGGGCTTTCATATCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGTTRPW*GFHIKS Trigger: TGATTTGATATGAAAGCCCCACCACGGTCTTGTGGT...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTTGCTTAACTAGAAGCTACTTGGGAACCTTCAGCCCCACCAGGAACAGCTGCCCTCACTCTTCCTaGGCATCAGGGTGGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: EACLTRSYLGTFSPTRNSCPHSS*ASGWPS Trigger: CGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCA...GCTGTTCCTGGTGGGGCTGAAGGTTCCCAAGTAGCTTCTAGTTAAGCAAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR-3UTR CCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGAGGGATTCCAGGTGTTaGGCTGAGGGGCAGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQRDSRC*AEGQDQ Trigger: CTGATCCTGCCCCTCAGCCCAACACCTGGAATCCCT...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGGTGGCCATTCCAGGGTaGCAGAAAGGAATGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRMQRADVTEPGTRGWLQVAIPG*QKGMGR Trigger: CCTTCCCATTCCTTTCTGCCACCCTGGAATGGCCAC...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCACAGCTTTCAGCTGCCTaGCCTCCCTCCCTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPQLSAA*PPSLSL Trigger: CAGGGAGAGGGAGGGAGGGCAGGCAGCTGAAAGCTG...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCATGGTTCTTCTAGGGCCATCTTGGGGACCCTTGAGACAGAGGAAAGTCCCACAGAGACAGCTATaGTTAACCACGTGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: WGMVLLGPSWGPLRQRKVPQRQL*LTTCSP Trigger: TGGGCTGCACGTGGTTAAGCATAGCTGTCTCTGTGG...GACTTTCCTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGAACCATGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGATGGGCCCCTGGTTCTCTCCTAGGGCTGTGGGCTTGGGCTTTGGGGAGGCTTTAAATAGAGTCTaGGGCATGGTTCTTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SKMGPWFSPRAVGLGFGEALNRV*GMVLLG Trigger: CCCTAGAAGAACCATGCCCCAGACTCTATTTAAAGC...CTCCCCAAAGCCCAAGCCCACAGCCCTAGGAGAGAACCAGGGGCCCATCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR CAA 90 bp | AATAGAGTCTGGGGCATGGTTCTTCTAGGGCCATCTTGGGGACCCTaGAGACAGAGGAAAGTCATGGCTGAGAGGACTAAGGCTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NRVWGMVLLGPSWGP*RQRKVMAERTKALG Trigger: CCCCAAAGCCTTAGTCCTCTCAGCCATGACTTTCCTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGAACCATGCCCCAGACTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTAGGATGTCCATGCTTTTaGCATTGTGACAGAGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: EVTAPRGSSQGSRGHALLGCPCF*HCDRGL Trigger: TAATCCTCTGTCACAATGTCAAAAGCATGGACATCC...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGTTCTGCCTCTTCTGCTaGGCTATCTCTGGTTACTCG | + |
|
Preference number: 2 (lower is better) Translates to: SRMQRADVTEPGTRGWLQFCLFC*AISGYS Trigger: CGAGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAA...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCCAGTCCTCCCCCACTaGAGCCAGGGTCCTCCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAPVLPH*SQGPPH Trigger: GTGCGGAGGACCCTGGCTCCAGTGGGGGAGGACTGG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCTTGCTTAACTAGAAGCTACTTGGGAACCTTCAGCCCCACCAGGAACAGCCAAGGAAATTTCCTTTaGGAGGGGGAAGTGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EACLTRSYLGTFSPTRNSQGNFL*EGEVGS Trigger: GCTCCCCACTTCCCCCTCTCAAAGGAAATTTCCTTG...GCTGTTCCTGGTGGGGCTGAAGGTTCCCAAGTAGCTTCTAGTTAAGCAAGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR TCA 90 bp | CACGCCTTCTGCTTTCTTACTAAAACATGTTTACTACATCAGATACAAAACCAGCCCGGCCTGGAGGTCTaGGGGCGTGCTGAGGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: HAFCFLTKTCLLHQIQNQPGLEV*GRAEAW Trigger: CCATGCCTCAGCACGCCCTCAGACCTCCAGGCCGGG...CTGGTTTTGTATCTGATGTAGTAAACATGTTTTAGTAAGAAAGCAGAAGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCAGGGCGGGGCAGGGTaGAAGAAGGGGATGCGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAQGGAG*KKGMRL Trigger: AAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGCATGGTTCTTCTAGGGCCATCTTGGGGACCCTTGAGACAGAGGAAAGTCTTTACCTCTTTGTGTTaGGCCACAGAGACAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: WGMVLLGPSWGPLRQRKVFTSLC*ATETAM Trigger: CATAGCTGTCTCTGTGGCCCAACACAAAGAGGTAAA...GACTTTCCTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGAACCATGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCATCCTCCAGGACCTTCTaGGCACAGGAAGTCACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPSSRTF*AQEVTA Trigger: AGCTGTGACTTCCTGTGCCCAGAAGGTCCTGGAGGA...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCTTGCTTAACTAGAAGCTACTTGGGAACCTTCAGCCCCACCAGGAACAGCCCTAGCTGCTCAGTGTaGTCCCCTCTGATAGATACA | + |
|
Preference number: 2 (lower is better) Translates to: EACLTRSYLGTFSPTRNSPSCSV*SPLIDT Trigger: TGTATCTATCAGAGGGGACCACACTGAGCAGCTAGG...GCTGTTCCTGGTGGGGCTGAAGGTTCCCAAGTAGCTTCTAGTTAAGCAAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CCA 90 bp | GTACGCGTACCAAAGGGTATCAGAGGCCCAGGTAAGGAATTCTTCATCAAATATAGAGGACTAAGGCTTTaGGGCCTCTCCTCCAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: VRVPKGIRGPGKEFFIKYRGLRL*GLSSRT Trigger: GGTCCTGGAGGAGAGGCCCCAAAGCCTTAGTCCTCT...ATATTTGATGAAGAATTCCTTACCTGGGCCTCTGATACCCTTTGGTACGCGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCTTGCTTAACTAGAAGCTACTTGGGAACCTTCAGCCCCACCAGGAACAGCTTTGAGAGGGGGAAGTaGGGAGCAATAGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: EACLTRSYLGTFSPTRNSFERGK*GAIDTQ Trigger: TTGTGTGTCTATTGCTCCCCACTTCCCCCTCTCAAA...GCTGTTCCTGGTGGGGCTGAAGGTTCCCAAGTAGCTTCTAGTTAAGCAAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCAATAGGGACCTTTGGGTaGCTCACATCACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPIGTFG*LTSHTH Trigger: GTGTGTGTGTGATGTGAGTCACCCAAAGGTCCCTAT...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGAGGGTCAGGGAGAAGGTaGGCAGACACGGGCTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EAQVRNSSSNISRKFPLRGSGRR*ADTGCL Trigger: CAAGCAGCCCGTGTCTGCTCACCTTCTCCCTGACCC...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCAGACAGAGGAAAGTCATaGCTGAGAGGACTAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPDRGKS*LRGLRL Trigger: AAGCCTTAGTCCTCTCAGCCATGACTTTCCTCTGTC...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTTACCCGGGGATGTTCTaGAAATCCAGCTGGGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAYPGMF*KSSWGR Trigger: TCTGCCCCAGCTGGATTTCCAGAACATCCCCGGGTA...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTATAGGGACCTTTGGGTaGCTCACATCACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: IVLCLMISASSAELSLVTIGTFG*LTSHTH Trigger: GTGTGTGTGTGATGTGAGTCACCCAAAGGTCCCTAT...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGATTCCAGGTGTTGGGCTaGGGGGCAGGATCAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: EAQVRNSSSNISRKFPLRFQVLG*GAGSGT Trigger: TGTCCCTGATCCTGCCCCTCAGCCCAACACCTGGAA...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | CACTTAGTGGTGAAGCAGAAAGCAGATAAAAGCCAAATGGGTACCAACAGAAACTGGTCACGACTCCTGTaGAACACTGGGGGTAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: HLVVKQKADKSQMGTNRNWSRLL*NTGGKM Trigger: CATCTTACCCCCAGTGTTCCACAGGAGTCGTGACCA...GTTTCTGTTGGTACCCATTTGGCTTTTATCTGCTTTCTGCTTCACCACTAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CAA 90 bp | GAGATACAACGTCAGCACTTAAATCTACAGACGGAACCCAAGCACTaGACCACAATGTTTAACTCTAAGCTCAGTGATTACACATCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: EIQRQHLNLQTEPKH*TTMFNSKLSDYTSD Trigger: GTCCGATGTGTAATCACTGAGCTTAGAGTTAAACATTGTGGTCAAGTGCTTGGGTTCCGTCTGTAGATTTAAGTGCTGACGTTGTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACATCTTGGGGACCCTTaGGACAGAGGAAAGTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: EAQVRNSSSNISRKFPLRHLGDP*DRGKSW Trigger: CCATGACTTTCCTCTGTCTCAAGGGTCCCCAAGATG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTTTTACCTCTTTGTGTTaGGCCACAGAGACAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAFTSLC*ATETAM Trigger: CATAGCTGTCTCTGTGGCCCAACACAAAGAGGTAAA...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACCTAGCTGCTCAGTGTaGTCCCCTCTGATAGATACA | + |
|
Preference number: 2 (lower is better) Translates to: EAQVRNSSSNISRKFPLRPSCSV*SPLIDT Trigger: TGTATCTATCAGAGGGGACCACACTGAGCAGCTAGG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | GCCCCTTCCACCCGGCCTGGAGGTCTGAGGGCGTGCTaGGGCATGGCATCAGGGCCTAGCTGCTCAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: APSTRPGGLRAC*GMASGPSCSVW Trigger: CCACACTGAGCAGCTAGGCCCTGATGCCATGCCTCAGCACGCCCTCAGACCTCCAGGCCGGGTGGAAGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | CCTGCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTaGCCGTCGGCACCCTGGCCTGCCGAGGCCGTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: PAVVQVSSGLSF*PSAPWPAEAVE Trigger: CTCGACGGCCTCGGCAGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | CCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTaGCCAGCCTCTTCCACCACACAGGGGGCTGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGSLSTRSPVAS*PASSTTQGAAL Trigger: GAGGGCAGCCCCCTGTGTGGTGGAAGAGGCTGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | GGTCAGGGAGAAGGTGAGCAGACACGGGCTGCTTGCTaGTCCTCTGCTCCTTGGGACAAGGGGGACCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGEGEQTRAAC*SSAPWDKGDPR Trigger: GCGAGGGTCCCCCTTGTCCCAAGGAGCAGAGGACCAGCAAGCAGCCCGTGTCTGCTCACCTTCTCCCTGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | GAGGGTCAGGGAGAAGGTGAGCAGACACGGGCTGCTTaGTGGTCCTCTGCTCCTTGGGACAAGGGGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: EGQGEGEQTRAA*WSSAPWDKGDP Trigger: AGGGTCCCCCTTGTCCCAAGGAGCAGAGGACCAGCAAGCAGCCCGTGTCTGCTCACCTTCTCCCTGACCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | GAGCAGACACGGGCTGCTTGCTGGTCCTCTGCTCCTTaGGACAAGGGGGACCCTCGCCAGGGAACAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EQTRAACWSSAP*DKGDPRQGTES Trigger: ACTCTCTGTTCCCTGGCGAGGGTCCCCCTTGTCCCAAGGAGCAGAGGACCAGCAAGCAGCCCGTGTCTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | GGGCTCGTGATGGCCCAGGTGTCAAAGATGGGCCCCTaGTTCTCTCCTAGGGCTGTGGGCTTGGGCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLVMAQVSKMGP*FSPRAVGLGFG Trigger: CCCAAAGCCCAAGCCCACAGCCCTAGGAGAGAACCAGGGGCCCATCTTTGACACCTGGGCCATCACGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCACTGGTCCTCTGCTCCTaGGGACAAGGGGGACCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LGLCPGSLSTRSPVASCPLVLCS*GQGGPS Trigger: CGAGGGTCCCCCTTGTCCCAAGGAGCAGAGGACCAG...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | GAAACCAAGGGAGGGGGCTGGAGCAAGGCAGACCTGTaGCCACCCATCACACGTGGTCACGACTCCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETKGGGWSKADL*PPITRGHDSCG Trigger: TCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCCAGCCCCCTCCCTTGGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CCA 72 bp | CAGGACCTTCTGGGCACAGGAAGTCACAGCTCCCCGTaGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QDLLGTGSHSSP*FLTRVSGTRPS Trigger: AGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCCTGTGCCCAGAAGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | ACAGGACATCTGGGTAAAAGCCCCTTCCACCCGGCCTaGAGGTCTGAGGGCGTGCTGAGGCATGGCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TGHLGKSPFHPA*RSEGVLRHGIR Trigger: CCTGATGCCATGCCTCAGCACGCCCTCAGACCTCCAGGCCGGGTGGAAGGGGCTTTTACCCAGATGTCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | GGGAACGGGAGCAGGCAGGAACACGGATGGAGGAACTaGGCAGGCAGCTTATTCAAGGATGAGGCCCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GNGSRQEHGWRN*AGSLFKDEARR Trigger: CCTGCGGGCCTCATCCTTGAATAAGCTGCCTGCCCAGTTCCTCCATCCGTGTTCCTGCCTGCTCCCGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR GCA 72 bp | GTAAGATGTCCCAGGACTCTCACCAACTTTGCCTCCTaGCAGAACTCCCAGGCTAAGCCCCGCCCCCGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VRCPRTLTNFAS*QNSQAKPRPRS Trigger: GGAACGGGGGCGGGGCTTAGCCTGGGAGTTCTGGCAGGAGGCAAAGTTGGTGAGAGTCCTGGGACATCTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCTCAAGGAAATTTCCTTaGAGAGGGGGAAGTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRAGQGERRGCVFLYTTPSRKFP*RGGSGE Trigger: CTCCCCACTTCCCCCTCTCAAAGGAAATTTCCTTGA...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | CCAGTCCTCCCCCACTGGAGCCAGGGTCCTCCGCACTaGCTTCCGGATCCATTTGCTAAGTTGCCTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PVLPHWSQGPPH*LPDPFAKLPAV Trigger: AACAGCAGGCAACTTAGCAAATGGATCCGGAAGTCAGTGCGGAGGACCCTGGCTCCAGTGGGGGAGGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | CAGGCTAAGCCCCGCCCCCGTTCCTCCTGGGACCTCTaGGTGGTCTCTCAAGGCACATTTACTCTCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QAKPRPRSSWDL*VVSQGTFTLSN Trigger: GTTGGAGAGAGTAAATGTGCCTTGAGAGACCACTCAGAGGTCCCAGGAGGAACGGGGGCGGGGCTTAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR GCA 72 bp | GCAGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATaGTTGAGTGCCCACCAACGCACACACGGGTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: AEEGERMGSPTG*LSAHQRTHGSN Trigger: GTTAGACCCGTGTGTGCGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CCA 72 bp | CCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTaGAACACTGGGGGTAAGATGTCCCAGGACTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PVPTHHTWSRLL*NTGGKMSQDSH Trigger: GTGAGAGTCCTGGGACATCTTACCCCCAGTGTTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CCA 72 bp | CTGGAGCAAGGCAGACCTGTGCCCACCCATCACACGTaGTCACGACTCCTGTGGAACACTGGGGGTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LEQGRPVPTHHT*SRLLWNTGGKM Trigger: CATCTTACCCCCAGTGTTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTGACTTCCGGATCCATTaGCTAAGTTGCCTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSHSSPWFLTRVSGTRPSDFRIH*LSCLLL Trigger: CAACAGCAGGCAACTTAGCAAATGGATCCGGAAGTC...AGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTGGAACCATCTTGGGGACCCTaGAGACAGAGGAAAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GARQTCAHPSHVVTTPVEPSWGP*RQRKVM Trigger: CATGACTTTCCTCTGTCTCAAGGGTCCCCAAGATGG...TTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGAGCCAGACTGGGGCTTaGTCCTGGAAGCCTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRMQRADVTEPGTRGWLQSQTGA*SWKPQH Trigger: GTGCTGAGGCTTCCAGGACAAAGCCCCAGTCTGGCT...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | AAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGTaGGCAGACACGGGCTGCTTGCTGGTCCTCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KREPFPRGSGRR*ADTGCLLVLCS Trigger: GGAGCAGAGGACCAGCAAGCAGCCCGTGTCTGCTCACCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | GCGGGATGGCTGCTTCTAGAATGCAGAGGGCTGATGTaGCTGAGCCAGGGACCAGAGGATGGTTGCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AGWLLLECRGLM*LSQGPEDGCRG Trigger: ACCTCTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGAAGCAGCCATCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | ACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTaGCCCTCGGGTATTCTCTCTCTCATTCTCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGGCPHSSWASG*PSGILSLILSH Trigger: ATGAGAGAGAATGAGAGAGAGAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | CCGCAACAAGGGAACGGGAGCAGGCAGGAACACGGATaGAGGAACTGGGCAGGCAGCTTATTCAAGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PQQGNGSRQEHG*RNWAGSLFKDE Trigger: CTCATCCTTGAATAAGCTGCCTGCCCAGTTCCTCCATCCGTGTTCCTGCCTGCTCCCGTTCCCTTGTTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR TCA 72 bp | AGGAAGGGGAAAGAATGGGGTCACCCACGGGATGCTTaGGTGCCCACCAACGCACACACGGGTCTAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: RKGKEWGHPRDA*VPTNAHTGLTL Trigger: AAGTGTTAGACCCGTGTGTGCGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR GCA 72 bp | TGTGTTGGGCCACAGAGACAGCTATGCTTAACCACGTaGAGCCCAAGGGCCATTAGACACACCTGCGACGAG | + |
|
Preference number: 3 (lower is better) Translates to: CVGPQRQLCLTT*SPRAIRHTCDE Trigger: CTCGTCGCAGGTGTGTCTAATGGCCCTTGGGCTGCACGTGGTTAAGCATAGCTGTCTCTGTGGCCCAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | TTGGTTGAACTCTTTCCAACACAGCCCTACCTCTCCTaGCCGCAACAAGGGAACGGGAGCAGGCAGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LVELFPTQPYLS*PQQGNGSRQEH Trigger: GTGTTCCTGCCTGCTCCCGTTCCCTTGTTGCGGGCAGGAGAGGTAGGGCTGTGTTGGAAAGAGTTCAACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CCA 72 bp | ACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTaGGGAGGACGCTCAGCTTTCAGCTGCCTGCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVVGLSYQISPI*GGRSAFSCLPS Trigger: GGAGGGCAGGCAGCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | GGGAGCGTTTTAGAGAGGGACAAACTTCTGGACCCCTaGGGCCTGCCACAGTTCCACGCCTTCTGCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSVLERDKLLDP*GLPQFHAFCFL Trigger: AAGAAAGCAGAAGGCGTGGAACTGTGGCAGGCCCCAGGGGTCCAGAAGTTTGTCCCTCTCTAAAACGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGTCTTCTAGGGCCATCTaGGGGACCCTTGAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRMQRADVTEPGTRGWLQSSRAI*GTLETE Trigger: CTCTGTCTCAAGGGTCCCCAAGATGGCCCTAGAAGA...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | TTAACCACGTGCAGCCCAAGGGCCATTAGACACACCTaGGACGAGCTCTTCGGATGTCAGGAGACGGATAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTTCSPRAIRHT*DELFGCQETDS Trigger: ACTATCCGTCTCCTGACATCCGAAGAGCTCGTCGCAGGTGTGTCTAATGGCCCTTGGGCTGCACGTGGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | GTCCTCCGCACTGACTTCCGGATCCATTTGCTAAGTTaGCTGCTGTTGTCCAGGTCTCTTCTGGCCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLRTDFRIHLLS*LLLSRSLLACL Trigger: AAGACAGGCCAGAAGAGACCTGGACAACAGCAGGCAACTTAGCAAATGGATCCGGAAGTCAGTGCGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | CTTCACAGCTACCCGGGGATGTTCTGGAAATCCAGCTaGGGCAGAGAAAGAATCAGACTCCATCCTAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHSYPGMFWKSS*GRERIRLHPSE Trigger: CTCGCTAGGATGGAGTCTGATTCTTTCTCTGCCCCAGCTGGATTTCCAGAACATCCCCGGGTAGCTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCCTAAGTTGCCTGCTGTaGTCCAGGTCTCTTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VGLSYQISPIWGGRSAFSLSCLL*SRSLLA Trigger: GGCCAGAAGAGACCTGGACAACAGCAGGCAACTTAG...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | CTTAGTAGGGCAGCTCCAGGGCTCGGCAAGATGTGGTaGTGCCGTAATTTGGTTGAACTCTTTCCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSRAAPGLGKMW*CRNLVELFPTQ Trigger: CTGTGTTGGAAAGAGTTCAACCAAATTACGGCAGCACCACATCTTGCCGAGCCCTGGAGCTGCCCTACTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| 3UTR CCA 72 bp | GTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTaGGGCTTTCATATCAAATCAGCCCAATTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VYRSCLITTRPW*GFHIKSAQFGE Trigger: CTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCTGGTCCTCTGCTCCTaGGGACAAGGGGGACCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: VYYIRYKTRRSRDTQSIALVLCS*GQGGPS Trigger: CGAGGGTCCCCCTTGTCCCAAGGAGCAGAGGACCAG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGTTACTCGGGACTAGGTaGAGAGATAATCTATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRMQRADVTEPGTRGWLQLLGTR*RDNLSG Trigger: CCCTGATAGATTATCTCTCAACCTAGTCCCGAGTAA...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTGCAGACACGGGCTGCTaGCTGGTCCTCTGCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAADTGC*LVLCSL Trigger: CAAGGAGCAGAGGACCAGCAAGCAGCCCGTGTCTGC...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR GCA 72 bp | AGTTTACCTCTTTGTGTTGGGCCACAGAGACAGCTATaGTTAACCACGTGCAGCCCAAGGGCCATTAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPLCVGPQRQL*LTTCSPRAIRH Trigger: GTGTCTAATGGCCCTTGGGCTGCACGTGGTTAAGCATAGCTGTCTCTGTGGCCCAACACAAAGAGGTAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CCA 72 bp | TGTGTGTACAGGTCCTGCCTCATCACCACAAGACCGTaGTGGGGCTTTCATATCAAATCAGCCCAATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CVYRSCLITTRP*WGFHIKSAQFG Trigger: CCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCTAAGTTGCCTGCTGTaGTCCAGGTCTCTTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VYYIRYKTRRSRDTQSIALSCLL*SRSLLA Trigger: GGCCAGAAGAGACCTGGACAACAGCAGGCAACTTAG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACCATCTTGGGGACCCTaGAGACAGAGGAAAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: EAQVRNSSSNISRKFPLRPSWGP*RQRKVM Trigger: CATGACTTTCCTCTGTCTCAAGGGTCCCCAAGATGG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGAGACTTCCGGATCCATTaGCTAAGTTGCCTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: EAQVRNSSSNISRKFPLRDFRIH*LSCLLL Trigger: CAACAGCAGGCAACTTAGCAAATGGATCCGGAAGTC...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTTCTGTTAGTGTATCCTaGTGTGTGAAAGTGTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VYYIRYKTRRSRDTQSIASVSVS*CVKVCI Trigger: AATGCACACTTTCACACACAAGGATACACTAACAGA...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | GATAATCTATCAGGGATGTCCATGCTTTTGACATTGTaGCAGAGGATTAACTCCTCAATCCAATTATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: DNLSGMSMLLTL*QRINSSIQLST Trigger: TGTTGATAATTGGATTGAGGAGTTAATCCTCTGTCACAATGTCAAAAGCATGGACATCCCTGATAGATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR TCA 72 bp | AAAATAACATTTGCTTTCCTTTATGCGTGTGTAGAGTaGACTTGTTTCCTTAGGCTGAGTAATAGGCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: KITFAFLYACVE*TCFLRLSNRQI Trigger: TATCTGCCTATTACTCAGCCTAAGGAAACAAGTTCACTCTACACACGCATAAAGGAAAGCAAATGTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR GCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGTCCCATGCATGCGTGTaGCGGTCAGCTCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGSHACV*RSAPGP Trigger: TGGGCCTGGAGCTGACCGGCACACGCATGCATGGGA...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCCCGCCAGCTGCTTGCTaGTTAGGCATGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQGAALTLPGHQGGPRVFPPAAC*LGMPAA Trigger: AGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGG...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQGAALTLPGHQGGPRVFIARPP*NCRGSR Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCTCACCGCCAGCTGCTTaGTGCTTAGGCATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQGAALTLPGHQGGPRVFSPPAA*CLGMPA Trigger: AGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGA...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCAAGGTCGGCCAGGTCCTaGCCTGTGCAGGTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLCPGSLSTRSPVASCPRSARS*PVQVSD Trigger: GTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCT...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTACAGTCAGGGGTCCCATaGATGCGTGTGCCGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTAPRGSSQGSRGHALLQSGVP*MRVPVS Trigger: GCTGACCGGCACACGCATGCATGGGACCCCTGACTG...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGTGGCTTCTTCTTGGCTaGCTCCTGGATCTGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGWLLLG*LLDLCA Trigger: CGCACACAGATCCAGGAGGCAGCCAAGAAGAAGCCA...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCTGGCCTTTCTTGGCTGCCTCCTaGATCTGTGTGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVQVSSGLSFWPSAPWPFLAAS*ICVRSS Trigger: GCTGGAGCGCACACAGATCCAGGAGGCAGCCAAGAA...AGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGCGGGATGAAGACACCTaGCTTCTTCTTGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGRDEDT*LLLGCL Trigger: GAGGCAGCCAAGAAGAAGCCAGGTGTCTTCATCCCG...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCCAGTCACCTCTGCTCTaGTCACACTGCATCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGAALTLPGHQGGPRVFQSPLL*SHCIFR Trigger: CCGGAAGATGCAGTGTGACCAGAGCAGAGGTGACTG...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATGCTTGAGTGCCCACCAACGCCGCCAGCTGCTTGCTaGTTAGGCATGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRGKNGVTHGMLECPPTPPAAC*LGMPAA Trigger: AGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGG...CGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR GCA 90 bp | GTGACTGAGCCAGGGACCAGAGGATGGTTGCAGAGGTCTGAGGAAGGGAGGGAGAACCGATGGAGTCCTTaGAACTGGCCCCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTEPGTRGWLQRSEEGRENRWSP*NWPPGS Trigger: AGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTT...CTCCCTCCCTTCCTCAGACCTCTGCAACCATCCTCTGGTCCCTGGCTCAGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAAGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQGSRPP*APWRRL Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAAGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLITTRPWWGFHIKSAQGSRPP*APWRRL Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...TTGGGCTGATTTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGGGGCTGCCCTCACTCTTCCTGGGCATCAGGGTGGCCCTCGGGTATTCGCTTCATCTCCTTGCTaGTTGTCTTCCCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQGAALTLPGHQGGPRVFASSPC*LSSQLL Trigger: CAAGAGCTGGGAAGACAATCAGCAAGGAGATGAAGC...GAATACCCGAGGGCCACCCTGATGCCCAGGAAGAGTGAGGGCAGCCCCCTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGGCGAGCTGGGCCATATaGCAGGGCTTGCAGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRMQRADVTEPGTRGWLQASWAI*QGLQTE Trigger: CTCCGTCTGCAAGCCCTGTCATATGGCCCAGCTCGC...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGQGERRGCVFLYTTPMDDSH*SSSMKL Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCTGGCCTTTGGCTGAGCCGTTCTaGTTGGAGTTCTCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVQVSSGLSFWPSAPWPLAEPF*LEFSRR Trigger: CCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAA...AGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGTCCCATGCATGCGTGTaGCGGTCAGCTCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRMQRADVTEPGTRGWLQSHACV*RSAPGP Trigger: TGGGCCTGGAGCTGACCGGCACACGCATGCATGGGA...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGCAGTCAGGGGTCCCATaGATGCGTGTGCCGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRMQRADVTEPGTRGWLQQSGVP*MRVPVS Trigger: GCTGACCGGCACACGCATGCATGGGACCCCTGACTG...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCTGGCCTTCTGGCAGGGGTCCTTaGTGGTATCCAGAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVQVSSGLSFWPSAPWPSGRGP*WYPELH Trigger: ATGAAGCTCTGGATACCACCAAGGACCCCTGCCAGA...AGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTGCAACACACACCTTGTaGCGACTGCACTTCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSPWFLTRVSGTRPSATHTL*RLHFTF Trigger: GAAGGTGAAGTGCAGTCGCCACAAGGTGTGTGTTGC...AGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCTGGCCTCGTATTTGTCCAGGTTaGTGGCAGCCAGTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVVQVSSGLSFWPSAPWPRICPG*WQPVLS Trigger: AGACAGAACTGGCTGCCATCAACCTGGACAAATACG...AGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTGGAACGGAAGCGGTTCCAGTaGTTAATCTTGCCGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GARQTCAHPSHVVTTPVERKRFQ*LILPLY Trigger: GTACAGCGGCAAGATTAAGCACTGGAACCGCTTCCG...TTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCATCTGGCAGGGGTCCTTaGTGGTATCCAGAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLCPGSLSTRSPVASCPSGRGP*WYPELH Trigger: ATGAAGCTCTGGATACCACCAAGGACCCCTGCCAGA...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTATTGGTCGGGGCAAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGCATCTCACCGCCAGCTaGTTGCTGCTTAGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSIGRGKREPFPRGSGRRHLTAS*LLLRHA Trigger: GGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATG...CCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTTGCCCCGACCAATAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CAA 72 bp | GGAGCCAGGGTCCTCCGCACTGACTTCCGGATCCATTaGCTAAGTTGCCTGCTGTTGTCCAGGTCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GARVLRTDFRIH*LSCLLLSRSLL Trigger: CAGAAGAGACCTGGACAACAGCAGGCAACTTAGCAAATGGATCCGGAAGTCAGTGCGGAGGACCCTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGAACCGATGGAGTCCTTaGAACTGGCCCCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQNRWSP*NWPPGS Trigger: AGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTT...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGTGGAGTCCTTGCAACTaGCCCCCAGGCTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQWSPCN*PPGSCP Trigger: TGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCA...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTATTGGTCGGGGCAAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGCGGGATGAAGACACCTaGCTTCTTCTTGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSIGRGKREPFPRGSGRRRDEDT*LLLGCL Trigger: GAGGCAGCCAAGAAGAAGCCAGGTGTCTTCATCCCG...CCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTTGCCCCGACCAATAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAAATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLITTRPWWGFHIKSAQIARPP*NCRGSR Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...TTGGGCTGATTTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGCTGCTTAGGCATGCCTaGTGCTCCAGCTTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SRMQRADVTEPGTRGWLQLLRHA*CSSLHT Trigger: TGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAG...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAATCACCGCCAGCTGCTTaGTGCTTAGGCATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQSPPAA*CLGMPA Trigger: AGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGA...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGAGTTGCACTGTTGGCTaGGCCGTTCTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQSCTVG*AVLLGV Trigger: AACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACT...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGAGGTATCACAGGAGTTaGAGAAGGGGCGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQRYHRS*RRGGCR Trigger: TCTGCATCCGCCCCTTCTTCAACTCCTGTGATACCT...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQILPLY*EMDDSH Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTAGGCATGCCTGCTaGTCCAGCTTACACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQLRHAC*SSLHTE Trigger: CTCTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAG...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | AGACCGTGGTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTGCTTAGGCATGCCTaGTGCTCCAGCTTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: RPWWGFHIKSAQFGEDAQLLRHA*CSSLHT Trigger: TGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAG...CTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCACCACGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAAGCAGCCAGTTCTGTCTaGTCCAGGAAGAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQAASSV*SRKRSP Trigger: TGGAGACCTCTTCCTGGACCAGACAGAACTGGCTGC...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCTTGCTTAACTAGAAGCTACTTGGGAACCTTCAGCCCCACCAGGAACAGCAGTTGCACTGTTGGCTaGGCCGTTCTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EACLTRSYLGTFSPTRNSSCTVG*AVLLGV Trigger: AACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACT...GCTGTTCCTGGTGGGGCTGAAGGTTCCCAAGTAGCTTCTAGTTAAGCAAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCAGAACATCCAACCGATaGAGTCCTTGCAACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLSYQISPIWGGRSAFSRTSNR*SPCNWP Trigger: GGGCCAGTTGCAAGGACTCCATCGGTTGGATGTTCT...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAATCAGAGAAGGCTGCTTaGTCCTGTGCTCCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQSEKAA*SCAPTS Trigger: AGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGA...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTAGGTCGGCCAGGTCCTaGCCTGTGCAGGTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYIRYKTRRSRDTQSIARSARS*PVQVSD Trigger: GTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCT...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTAGCTCCAGGCCCAGCTaGTCCACACACCAGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLMISASSAELSLVTSSRPS*STHQQS Trigger: TGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCT...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLSYQISPIWGGRSAFSMDDSH*SSSMKL Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS-3UTR GCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTCATCTCACCGCCAGCTaGTTGCTGCTTAGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLMISASSAELSLVTHLTAS*LLLRHA Trigger: GGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATG...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCATTGGCTGAGCCGTTCTaGTTGGAGTTCTCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPLAEPF*LEFSRR Trigger: CCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAA...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CCA 90 bp | GTACGCGTACCAAAGGGTATCAGAGGCCCAGGTAAGGAATTCTTCATCAAATATTGGAGTCCTTGCAACTaGCCCCCAGGCTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVPKGIRGPGKEFFIKYWSPCN*PPGSCP Trigger: TGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCA...ATATTTGATGAAGAATTCCTTACCTGGGCCTCTGATACCCTTTGGTACGCGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTTGGCTTCTTCTTGGCTaGCTCCTGGATCTGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLMISASSAELSLVTWLLLG*LLDLCA Trigger: CGCACACAGATCCAGGAGGCAGCCAAGAAGAAGCCA...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTTTCTTGGCTGCCTCCTaGATCTGTGTGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAFLAAS*ICVRSS Trigger: GCTGGAGCGCACACAGATCCAGGAGGCAGCCAAGAA...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTCAGTCACCTCTGCTCTaGTCACACTGCATCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLMISASSAELSLVTQSPLL*SHCIFR Trigger: CCGGAAGATGCAGTGTGACCAGAGCAGAGGTGACTG...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | CACGCCTTCTGCTTTCTTACTAAAACATGTTTACTACATCAGATACAAAACCAGGCGAGCTGGGCCATATaGCAGGGCTTGCAGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAFCFLTKTCLLHQIQNQASWAI*QGLQTE Trigger: CTCCGTCTGCAAGCCCTGTCATATGGCCCAGCTCGC...CTGGTTTTGTATCTGATGTAGTAAACATGTTTTAGTAAGAAAGCAGAAGGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VYYIRYKTRRSRDTQSIARCTAR*TTAIAR Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTCGTATTTGTCCAGGTTaGTGGCAGCCAGTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLMISASSAELSLVTRICPG*WQPVLS Trigger: AGACAGAACTGGCTGCCATCAACCTGGACAAATACG...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTCATCACAGCTCGGGATaGAGACACCTGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAHHSSG*RHLASS Trigger: AGAAGAAGCCAGGTGTCTTCATCCCGAGCTGTGATG...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR GCA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAILPLY*EMDDSH Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | CACTTAGTGGTGAAGCAGAAAGCAGATAAAAGCCAAATGGGTACCAACAGAAACTCAGAGAAGGCTGCTTaGTCCTGTGCTCCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLVVKQKADKSQMGTNRNSEKAA*SCAPTS Trigger: AGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGA...GTTTCTGTTGGTACCCATTTGGCTTTTATCTGCTTTCTGCTTCACCACTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EAQVRNSSSNISRKFPLRRCTAR*TTAIAR Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGAAGGTATCACAGGAGTTaGAGAAGGGGCGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAQVRNSSSNISRKFPLRRYHRS*RRGGCR Trigger: TCTGCATCCGCCCCTTCTTCAACTCCTGTGATACCT...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR TCA 90 bp | CACGCCTTCTGCTTTCTTACTAAAACATGTTTACTACATCAGATACAAAACCAGCATCACAGCTCGGGATaGAGACACCTGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HAFCFLTKTCLLHQIQNQHHSSG*RHLASS Trigger: AGAAGAAGCCAGGTGTCTTCATCCCGAGCTGTGATG...CTGGTTTTGTATCTGATGTAGTAAACATGTTTTAGTAAGAAAGCAGAAGGCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACTTAGGCATGCCTGCTaGTCCAGCTTACACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EAQVRNSSSNISRKFPLRLRHAC*SSLHTE Trigger: CTCTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| 3UTR CAA 72 bp | CGTCAGCACTTAAATCTACAGACGGAACCCAAGCACTaGACCACAATGTTTAACTCTAAGCTCAGTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQHLNLQTEPKH*TTMFNSKLSDY Trigger: GTAATCACTGAGCTTAGAGTTAAACATTGTGGTCAAGTGCTTGGGTTCCGTCTGTAGATTTAAGTGCTGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTTTGTCCTGGAAGCCTCAGCACAAGGTCCCCAGTAGCTAGCTGCCCAGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLCPGSLSTRSPVASCPGVSPS*SPLASP Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...TGGGCAGCTAGCTACTGGGGACCTTGTGCTGAGGCTTCCAGGACAAAGCCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCCTCACCGCCAGCTGCTaGCTGCTTAGGCATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGQGERRGCVFLYTTPLTASC*LLRHAC Trigger: GCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAG...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGCTGGCCCCCAGGCTCTaGTCCAACCCTGCGGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGLAPRL*SNPAGL Trigger: TAACCCCGCAGGGTTGGACAAGAGCCTGGGGGCCAG...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGCGGGGCAGGGTGAAAGAAGGGGATGCGTCTTCCTCTACACCACCCCCCAACCGATGGAGTCCTaGCAACTGGCCCCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGQGERRGCVFLYTTPQPMES*QLAPRL Trigger: GAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTG...GGGGGTGGTGTAGAGGAAGACGCATCCCCTTCTTTCACCCTGCCCCGCCCTGCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTTGTCCAGGTCTCTTCTGGCCTGTCTTTCTGGCCGTCGGCACCCTGGCCTCTGGCCCCCAGGCTCTaGTCCAACCCTGCGGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AVVQVSSGLSFWPSAPWPLAPRL*SNPAGL Trigger: TAACCCCGCAGGGTTGGACAAGAGCCTGGGGGCCAG...AGGCCAGGGTGCCGACGGCCAGAAAGACAGGCCAGAAGAGACCTGGACAACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS TCA 90 bp | GAGCCTATCCCCCAGGTCGGCCAGGTCCTGCCCTGTGCAGGTCTCTaGCTTGCTGTCGGTGGTAGACGCAGTAGACTGCTCCGTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: EPIPQVGQVLPCAGL*LAVGGRRSRLLRGT Trigger: TGTCCCACGGAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCTGGGGGATAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | CCTGTGCAGGTCTCTGACTTGCTGTCGGTGGTAGACGCAGTAGACTaGTCCGTGGGACAGGGACAGGGGCCCTCACATCTCACCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVQVSDLLSVVDAVD*SVGQGQGPSHLTAS Trigger: GCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCCCACGGAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTGGAACCCTCCTTGAGCCCCTaGGCGTCGCCTTCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GARQTCAHPSHVVTTPVEPSLSP*ASPSAK Trigger: CTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGG...TTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS GCA 90 bp | CCGTGGGACAGGGACAGGGGCCCTCACATCTCACCGCCAGCTGCTTaGTGCTTAGGCATGCCTGCTGCTCCAGCTTACACACAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PWDRDRGPHISPPAA*CLGMPAAPAYTQSC Trigger: ACAGCTCTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCCCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | TGCTCCGTGGGACAGGGACAGGGGCCCTCACATCTCACCGCCAGCTaGTTGCTGCTTAGGCATGCCTGCTGCTCCAGCTTACACACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSVGQGQGPSHLTAS*LLLRHACCSSLHTE Trigger: CTCTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCCCACGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | AGCTGGAACCAGTCACGGAGCCTATCCCCCAGGTCGGCCAGGTCCTaGCCTGTGCAGGTCTCTGACTTGCTGTCGGTGGTAGACGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SWNQSRSLSPRSARS*PVQVSDLLSVVDAV Trigger: TACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCTGGGGGATAGGCTCCGTGACTGGTTCCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS CCA 90 bp | GCACTGTTGGCTGAGCCGTTCTGCTTGGAGTTCTCACGAAGGAGCTaGAACCAGTCACGGAGCCTATCCCCCAGGTCGGCCAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLAEPFCLEFSRRS*NQSRSLSPRSARSC Trigger: GCAGGACCTGGCCGACCTGGGGGATAGGCTCCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | AACCAGAAGATCCAGGGACACACAGAGCATAGCTCCCCAGCGGGGCAGGGCGGGCTGTGCTCCAACTTCTaGCGGCTGATGCACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NQKIQGHTEHSSPAGQGGLCSNF*RLMHMA Trigger: CGCCATGTGCATCAGCCGCAAGAAGTTGGAGCACAG...CCCGCCCTGCCCCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | TGGGACAGGGACAGGGGCCCTCACATCTCACCGCCAGCTGCTTGCTaGTTAGGCATGCCTGCTGCTCCAGCTTACACACAGAGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WDRDRGPHISPPAAC*LGMPAAPAYTQSCR Trigger: CCTACAGCTCTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCTATTGGTCGGGGCAAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSIGRGKREPFPRGSGRRPSLSP*ASPSAK Trigger: CTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGG...CCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTTGCCCCGACCAATAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS TCA 90 bp | CCCCAGGCTCTTGTCCAACCCTGCGGGGTTAGTTGCACTGTTGGCTaGGCCGTTCTGCTTGGAGTTCTCACGAAGGAGCTGGAACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQALVQPCGVSCTVG*AVLLGVLTKELEPV Trigger: GACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGGGTTGGACAAGAGCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | CGTCGGAGCCACAGACTGAAGCGAGCTGGGCCATATGACAGGGCTTaGAGACGGAGTCTTTGCCTCCGTGGAGTTTCAGAGAAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSHRLKRAGPYDRA*RRSLCLRGVSEKAA Trigger: AGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAAGCCCTGTCATATGGCCCAGCTCGCTTCAGTCTGTGGCTCCGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTATTCTGGCAGGGGTCCTaGGTGGTATCCAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EVTAPRGSSQGSRGHALLFWQGS*VVSRAS Trigger: TGAAGCTCTGGATACCACCAAGGACCCCTGCCAGAA...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTATGCAGACCTCGTATTaGTCCAGGTTGATGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSPWFLTRVSGTRPSMQTSY*SRLMAA Trigger: GGCTGCCATCAACCTGGACAAATACGAGGTCTGCAT...AGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GAAGTCACAGCTCCCCGTGGTTCCTCACAAGGGTCTCGGGGACACGCCCTTCTAACACCTGGCTTCTTCTaGGCTGCCTCCTGGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EVTAPRGSSQGSRGHALLTPGFF*AASWIC Trigger: ACAGATCCAGGAGGCAGCCAAGAAGAAGCCAGGTGT...TAGAAGGGCGTGTCCCCGAGACCCTTGTGAGGAACCACGGGGAGCTGTGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | CAGTGCTTAATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATTaGTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCLILPLYCEMDDSH*SSSMKLPGVSPSLS Trigger: GCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATTAAGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCTATTGGTCGGGGCAAGAGGGAACCATTTCCTAGAGGGTCAGGGAGAAGGGGCGCGCTGGTAGCCTaGAGCAACACACACCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSIGRGKREPFPRGSGRRGALVA*SNTHLV Trigger: CACAAGGTGTGTGTTGCTCAAGGCTACCAGCGCGCC...CCTTCTCCCTGACCCTCTAGGAAATGGTTCCCTCTTGCCCCGACCAATAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCAGACCTGTGCCCACCCATCACACGTGGTCACGACTCCTGTGGAACAACACCTGGCTTCTTCTaGGCTGCCTCCTGGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKADLCPPITRGHDSCGTTPGFF*AASWIC Trigger: ACAGATCCAGGAGGCAGCCAAGAAGAAGCCAGGTGT...TGTTCCACAGGAGTCGTGACCACGTGTGATGGGTGGGCACAGGTCTGCCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS GCA 90 bp | GGCTTGCAGACGGAGTCTTTGCCTCCGTGGAGTTTCAGAGAAGGCTaGTTGATCCTGTGCTCCAACTTCTTGCGGCTGATGCACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLQTESLPPWSFREG*LILCSNFLRLMHMA Trigger: CGCCATGTGCATCAGCCGCAAGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS GCA 90 bp | TTGTCCAACCCTGCGGGGTTAGTTGCACTGTTGGCTGAGCCGTTCTaGTTGGAGTTCTCACGAAGGAGCTGGAACCAGTCACGGAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSNPAGLVALLAEPF*LEFSRRSWNQSRSL Trigger: TAGGCTCCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGGGTTGGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGCTGTGCTCCAACTTCTaGCGGCTGATGCACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRMQRADVTEPGTRGWLQLCSNF*RLMHMA Trigger: CGCCATGTGCATCAGCCGCAAGAAGTTGGAGCACAG...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAACTCACCGCCAGCTGCTaGCTGCTTAGGCATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQLTASC*LLRHAC Trigger: GCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAG...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGGGGAAAGAATGGGGTCACCCACGGGATGCTTGAGTGCCCACCAACGGATGGACGACAGCCATaGCTCGTCCTCCATGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: RGRGKNGVTHGMLECPPTDGRQP*LVLHEI Trigger: AATTTCATGGAGGACGAGCAATGGCTGTCGTCCATC...CGTTGGTGGGCACTCAAGCATCCCGTGGGTGACCCCATTCTTTCCCCTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAGVSPS*SPLASP Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTACAGGTCCTGCCTCATCACCACAAGACCGTGGTGGGGCTTTCATATCAATTCTGGCAGGGGTCCTaGGTGGTATCCAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CVQVLPHHHKTVVGLSYQFWQGS*VVSRAS Trigger: TGAAGCTCTGGATACCACCAAGGACCCCTGCCAGAA...TTGATATGAAAGCCCCACCACGGTCTTGTGGTGATGAGGCAGGACCTGTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGAATGCAGAGGGCTGATGTGACTGAGCCAGGGACCAGAGGATGGTTGCAGTCGTATTTGTCCAGGTaGATGGCAGCCAGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRMQRADVTEPGTRGWLQSYLSR*MAASSV Trigger: GACAGAACTGGCTGCCATCAACCTGGACAAATACGA...CTGCAACCATCCTCTGGTCCCTGGCTCAGTCACATCAGCCCTCTGCATTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVLCLMISASSAELSLVTSSSMK*PGVSPS Trigger: GGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCTTGCAGACGGAGTCTTaGCCTCCGTGGAGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGLSYQISPIWGGRSAFSLQTES*PPWSFR Trigger: TCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAA...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTCAACCGATGGAGTCCTaGCAACTGGCCCCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVLCLMISASSAELSLVTQPMES*QLAPRL Trigger: GAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTG...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCATGCAGACCTCGTATTaGTCCAGGTTGATGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLSYQISPIWGGRSAFSMQTSY*SRLMAA Trigger: GGCTGCCATCAACCTGGACAAATACGAGGTCTGCAT...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS CCA 90 bp | ATGCAGACCTCGTATTTGTCCAGGTTGATGGCAGCCAGTTCTGTCTaGTCCAGGAAGAGGTCTCCACTAGTGTCCAGCTTAGAGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: MQTSYLSRLMAASSV*SRKRSPLVSSLENI Trigger: GATGTTCTCTAAGCTGGACACTAGTGGAGACCTCTTCCTGGACCAGACAGAACTGGCTGCCATCAACCTGGACAAATACGAGGTCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTTTCATATCAAATCAGCCCAATTTGGGGAGGACGCTCAGCTTTCAGCTTCAGAGAAGGCTGCTaGATCCTGTGCTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLSYQISPIWGGRSAFSFREGC*ILCSNF Trigger: GAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAA...GCTGAAAGCTGAGCGTCCTCCCCAAATTGGGCTGATTTGATATGAAAGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTGGCGCGCTGGTAGCCTaGAGCAACACACACCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VYYIRYKTRRSRDTQSIAGALVA*SNTHLV Trigger: CACAAGGTGTGTGTTGCTCAAGGCTACCAGCGCGCC...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS TCA 90 bp | TGGTATCCAGAGCTTCATCTCCTTGCTGATTGTCTTCCCAGCTCTTaGTGTAATCATCTTCTACCTCGTCTCGGAAGCGGTTCCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WYPELHLLADCLPSS*CNHLLPRLGSGSSA Trigger: AGCACTGGAACCGCTTCCGAGACGAGGTAGAAGATGATTACATCAAGAGCTGGGAAGACAATCAGCAAGGAGATGAAGCTCTGGATACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCAAGGCACATTTACTCTCTCCAACCTCAAACTTCCCCAACGTACACCATTCCAGTGCTTAATCTaGCCGCTGTACTGCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSQGTFTLSNLKLPQRTPFQCLI*PLYCEM Trigger: CATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAA...TGGTGTACGTTGGGGAAGTTTGAGGTTGGAGAGAGTAAATGTGCCTTGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS TCA 90 bp | TGGTATCCAGAGCTTCATCTCCTTGCTGATTGTCTTCCCAGCTCTTaGTGTAATCATCTGGCTTTTTGTCTCGGAAGCGGTTCCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WYPELHLLADCLPSS*CNHLAFCLGSGSSA Trigger: AGCACTGGAACCGCTTCCGAGACAAAAAGCCAGATGATTACATCAAGAGCTGGGAAGACAATCAGCAAGGAGATGAAGCTCTGGATACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGATACAACGTCAGCACTTAAATCTACAGACGGAACCCAAGCACTTGACTCGTATTTGTCCAGGTaGATGGCAGCCAGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRDTTSALKSTDGTQALDSYLSR*MAASSV Trigger: GACAGAACTGGCTGCCATCAACCTGGACAAATACGA...GTCAAGTGCTTGGGTTCCGTCTGTAGATTTAAGTGCTGACGTTGTATCTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
||
| CDS-3UTR CAA 90 bp | GTACGCGTACCAAAGGGTATCAGAGGCCCAGGTAAGGAATTCTTCATCAAATATTTCCAGTGCTTAATCTaGCCGCTGTACTGCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VRVPKGIRGPGKEFFIKYFQCLI*PLYCEM Trigger: CATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAA...ATATTTGATGAAGAATTCCTTACCTGGGCCTCTGATACCCTTTGGTACGCGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
||
| CDS-3UTR CAA 90 bp | GTACGCGTACCAAAGGGTATCAGAGGCCCAGGTAAGGAATTCTTCATCAAATATCAGAGCTTCATCTCCTaGCTGATTGTCTTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRVPKGIRGPGKEFFIKYQSFIS*LIVFPA Trigger: AGCTGGGAAGACAATCAGCAAGGAGATGAAGCTCTG...ATATTTGATGAAGAATTCCTTACCTGGGCCTCTGATACCCTTTGGTACGCGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS-3UTR CAA 90 bp | ATTGTCCTCTGTCTCATGATTTCTGCCTCTTCTGCTGAGCTATCTCTGGTTACTTTCAGAGAAGGCTGCTaGATCCTGTGCTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVLCLMISASSAELSLVTFREGC*ILCSNF Trigger: GAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAA...AGTAACCAGAGATAGCTCAGCAGAAGAGGCAGAAATCATGAGACAGAGGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS-3UTR CAA 90 bp | CACTTAGTGGTGAAGCAGAAAGCAGATAAAAGCCAAATGGGTACCAACAGAAACTTGCAGACGGAGTCTTaGCCTCCGTGGAGTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: HLVVKQKADKSQMGTNRNLQTES*PPWSFR Trigger: TCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAA...GTTTCTGTTGGTACCCATTTGGCTTTTATCTGCTTTCTGCTTCACCACTAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| CDS-3UTR CAA 90 bp | GTTTACTACATCAGATACAAAACCAGAAGATCCAGGGACACACAGAGCATAGCTGATGGACGACAGCCATaGCTCGTCCTCCATGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: VYYIRYKTRRSRDTQSIADGRQP*LVLHEI Trigger: AATTTCATGGAGGACGAGCAATGGCTGTCGTCCATC...AGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATCTGATGTAGTAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCCAGGTAAGGAATTCTTCATCAAATATATCAAGGAAATTTCCTTTGAGACAGAGCTTCATCTCCTaGCTGATTGTCTTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EAQVRNSSSNISRKFPLRQSFIS*LIVFPA Trigger: AGCTGGGAAGACAATCAGCAAGGAGATGAAGCTCTG...TCTCAAAGGAAATTTCCTTGATATATTTGATGAAGAATTCCTTACCTGGGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | TCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCAGCCAAGGCGACCACGGCGAGGAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSMKLPGVSPSLSP*ASPSAKATTARSSS Trigger: GCTGCTGCTCCTCGCCGTGGTCGCCTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | ATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCAGCCAAGGCGACCACGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: MKLPGVSPSLSP*ASPSAKATTAR Trigger: CCTCGCCGTGGTCGCCTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | AGCCATTGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCTTCAGCCAAGGCGACCACGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SHCSSSMKLPGVSPS*SPLASPSAKATTAR Trigger: CCTCGCCGTGGTCGCCTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | TCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCTTCAGCCAAGGCGACC | + |
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Preference number: 6 (lower is better) Translates to: SSSMKLPGVSPS*SPLASPSAKAT Trigger: GGTCGCCTTGGCTGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS TCA 72 bp | CCCCAGGTCGGCCAGGTCCTGCCCTGTGCAGGTCTCTaGCTTGCTGTCGGTGGTAGACGCAGTAGACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PQVGQVLPCAGL*LAVGGRRSRLL Trigger: GAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | CTATCCCCCAGGTCGGCCAGGTCCTGCCCTGTGCAGGTCTCTGACTaGCTGTCGGTGGTAGACGCAGTAGACTGCTCCGTGGGACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSPRSARSCPVQVSD*LSVVDAVDCSVGQG Trigger: TCCCTGTCCCACGGAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCTGGGGGATAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS TCA 72 bp | CCGTCGGAGCCACAGACTGAAGCGAGCTGGGCCATATaGCAGGGCTTGCAGACGGAGTCTTTGCCTCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSEPQTEASWAI*QGLQTESLPPW Trigger: CCACGGAGGCAAAGACTCCGTCTGCAAGCCCTGTCATATGGCCCAGCTCGCTTCAGTCTGTGGCTCCGACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | GGACAGGGACAGGGGCCCTCACATCTCACCGCCAGCTaGTTGCTGCTTAGGCATGCCTGCTGCTCCAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GQGQGPSHLTAS*LLLRHACCSSL Trigger: TAAGCTGGAGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | GAGAAACCCACGATGTCATCACAGTCAGGGGTCCCATaGATGCGTGTGCCGGTCAGCTCCAGGCCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EKPTMSSQSGVP*MRVPVSSRPSW Trigger: CCAGCTGGGCCTGGAGCTGACCGGCACACGCATGCATGGGACCCCTGACTGTGATGACATCGTGGGTTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CCA 72 bp | GCTGAGCCGTTCTGCTTGGAGTTCTCACGAAGGAGCTaGAACCAGTCACGGAGCCTATCCCCCAGGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEPFCLEFSRRS*NQSRSLSPRSA Trigger: GGCCGACCTGGGGGATAGGCTCCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | GAGATGGACGACAGCCATTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCCTTGAGCCCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EMDDSHCSSSMK*PGVSPSLSPLA Trigger: CGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | AGGTCGGCCAGGTCCTGCCCTGTGCAGGTCTCTGACTaGCTGTCGGTGGTAGACGCAGTAGACTGCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSARSCPVQVSD*LSVVDAVDCSV Trigger: CACGGAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | CTGTACTGCGAGATGGACGACAGCCATTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCCTTGAGCCCCTTGGCGTCGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LYCEMDDSHCSSSMK*PGVSPSLSPLASPS Trigger: TGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | GACAGGGGCCCTCACATCTCACCGCCAGCTGCTTGCTaGTTAGGCATGCCTGCTGCTCCAGCTTACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: DRGPHISPPAAC*LGMPAAPAYTQ Trigger: CTGTGTGTAAGCTGGAGCAGCAGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | GTCTCTGACTTGCTGTCGGTGGTAGACGCAGTAGACTaGTCCGTGGGACAGGGACAGGGGCCCTCACATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSDLLSVVDAVD*SVGQGQGPSHL Trigger: GAGATGTGAGGGCCCCTGTCCCTGTCCCACGGAGCAGTCTACTGCGTCTACCACCGACAGCAAGTCAGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | ATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATTaGTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ILPLYCEMDDSH*SSSMKLPGVSP Trigger: GGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | CAACCGATGGAGTCCTTGCAACTGGCCCCCAGGCTCTaGTCCAACCCTGCGGGGTTAGTTGCACTGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPMESLQLAPRL*SNPAGLVALLA Trigger: AGCCAACAGTGCAACTAACCCCGCAGGGTTGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | CCAGTGCTTAATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATaGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVLNLAAVLRDGRQP*LVLHEIAGGLALLE Trigger: CTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATTAAGCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | TCCAACCCTGCGGGGTTAGTTGCACTGTTGGCTGAGCCGTTCTGCTaGGAGTTCTCACGAAGGAGCTGGAACCAGTCACGGAGCCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SNPAGLVALLAEPFC*EFSRRSWNQSRSLS Trigger: GGATAGGCTCCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGGGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | AATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATaGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLAAVLRDGRQP*LVLHEIAGGLA Trigger: GGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | GCGGGGTTAGTTGCACTGTTGGCTGAGCCGTTCTGCTaGGAGTTCTCACGAAGGAGCTGGAACCAGTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLVALLAEPFC*EFSRRSWNQSR Trigger: CCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | GTGTCCAGCTTAGAGAACATCCAACCGATGGAGTCCTaGCAACTGGCCCCCAGGCTCTTGTCCAACCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSLENIQPMES*QLAPRLLSNPA Trigger: CGCAGGGTTGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTGGATGTTCTCTAAGCTGGACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | TTGCAGACGGAGTCTTTGCCTCCGTGGAGTTTCAGAGAAGGCTGCTaGATCCTGTGCTCCAACTTCTTGCGGCTGATGCACATGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQTESLPPWSFREGC*ILCSNFLRLMHMAR Trigger: GCGCGCCATGTGCATCAGCCGCAAGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS TCA 72 bp | CTTGTCCAACCCTGCGGGGTTAGTTGCACTGTTGGCTaGGCCGTTCTGCTTGGAGTTCTCACGAAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVQPCGVSCTVG*AVLLGVLTKEL Trigger: CAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGGGTTGGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | CGGAAGCGGTTCCAGTGCTTAATCTTGCCGCTGTACTaGGAGATGGACGACAGCCATTGCTCGTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RKRFQCLILPLY*EMDDSHCSSSM Trigger: CATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAACCGCTTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | CACAGACTGAAGCGAGCTGGGCCATATGACAGGGCTTaGAGACGGAGTCTTTGCCTCCGTGGAGTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HRLKRAGPYDRA*RRSLCLRGVSE Trigger: CTCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAAGCCCTGTCATATGGCCCAGCTCGCTTCAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | CCTGCGGGGTTAGTTGCACTGTTGGCTGAGCCGTTCTaGTTGGAGTTCTCACGAAGGAGCTGGAACCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGLVALLAEPF*LEFSRRSWNQS Trigger: TGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | AGGCTCTTGTCCAACCCTGCGGGGTTAGTTGCACTGTaGGCTGAGCCGTTCTGCTTGGAGTTCTCACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLSNPAGLVAL*AEPFCLEFSRR Trigger: CCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACCCCGCAGGGTTGGACAAGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 90 bp | TCTCCACTAGTGTCCAGCTTAGAGAACATCCAACCGATGGAGTCCTaGCAACTGGCCCCCAGGCTCTTGTCCAACCCTGCGGGGTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPLVSSLENIQPMES*QLAPRLLSNPAGLV Trigger: AACTAACCCCGCAGGGTTGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTGGATGTTCTCTAAGCTGGACACTAGTGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | TCTACCTCGTCTCGGAAGCGGTTCCAGTGCTTAATCTaGCCGCTGTACTGCGAGATGGACGACAGCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSSRKRFQCLI*PLYCEMDDSHC Trigger: GCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAACCGCTTCCGAGACGAGGTAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121820.9 |
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| CDS CAA 72 bp | CAGGAGTTGAAGAAGGGGCGGATGCAGACCTCGTATTaGTCCAGGTTGATGGCAGCCAGTTCTGTCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QELKKGRMQTSY*SRLMAASSVWS Trigger: GGACCAGACAGAACTGGCTGCCATCAACCTGGACAAATACGAGGTCTGCATCCGCCCCTTCTTCAACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS GCA 72 bp | ACGGAGTCTTTGCCTCCGTGGAGTTTCAGAGAAGGCTaGTTGATCCTGTGCTCCAACTTCTTGCGGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TESLPPWSFREG*LILCSNFLRLM Trigger: CATCAGCCGCAAGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | GAGTCTTTGCCTCCGTGGAGTTTCAGAGAAGGCTGCTaGATCCTGTGCTCCAACTTCTTGCGGCTGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ESLPPWSFREGC*ILCSNFLRLMH Trigger: GTGCATCAGCCGCAAGAAGTTGGAGCACAGGATCAAGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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| CDS CAA 72 bp | GGCTTTTTGTCTCGGAAGCGGTTCCAGTGCTTAATCTaGCCGCTGTACTGCGAGATGGACGACAGCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: GFLSRKRFQCLI*PLYCEMDDSHC Trigger: GCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAACCGCTTCCGAGACAAAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165024.3 |
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| CDS CCA 72 bp | TCGTATTTGTCCAGGTTGATGGCAGCCAGTTCTGTCTaGTCCAGGAAGAGGTCTCCACTAGTGTCCAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SYLSRLMAASSV*SRKRSPLVSSL Trigger: TAAGCTGGACACTAGTGGAGACCTCTTCCTGGACCAGACAGAACTGGCTGCCATCAACCTGGACAAATACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121820.9 ENSMUST00000165024.3 |
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