Pregenerated sensors for SPOCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028784Ensembl transcript IDs: ENSMUST00000084263.6, ENSMUST00000128007.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTaGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KQTAEQIQTRQV*ESSLAPPQIQH Trigger: ATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGACCCTTTCTCTCCTCCTaGTCCCGCCAGCGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGPFLSS*SRQRDS Trigger: GCTGTCCCGCTGGCGGGACCAGGAGGAGAGAAAGGG...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGCCAGAGGGCGCAGCCTaGCTGGCAGAGGCTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRPEGAA*LAEAQR Trigger: CCTTTGAGCCTCTGCCAGCCAGGCTGCGCCCTCTGG...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGCCGGGTCAGGTGGAGTaGCAGGGCTGCCAACCACAA | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRPGQVE*QGCQPQ Trigger: TTGTGGTTGGCAGCCCTGGCACTCCACCTGACCCGG...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAGGGGATCTCGCAGGTTaGAGAGCAGGCTGCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGGDLAG*RAGCGT Trigger: AGTACCGCAGCCTGCTCTTCAACCTGCGAGATCCCC...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGGGGCAGGACTGGAGATaGGGGCGGGCCCTTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: QIQTRQVWESSLAPPQIQGQDWR*GRALCT Trigger: AGTGCAAAGGGCCCGCCCCCATCTCCAGTCCTGCCC...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAGGTCGGGAAGCTCCTaGGCACGAGTCCACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGRSGSS*ARVHST Trigger: GGTGCTGTGGACTCGTGCCCAGGAGCTTCCCGACCT...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGAGAGCCTGGACAAGCTaGCAGCTGTGTCCCGAGATC | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRRAWTS*QLCPEI Trigger: GATCTCGGGACACAGCTGTCAGCTTGTCCAGGCTCT...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAAAGCCTTGGGGGACCTaGAAAGGCCTCTGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGKPWGT*KGLWRS Trigger: GCTTCTCCAGAGGCCTTTGCAGGTCCCCCAAGGCTT...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAGGACCTGGGGCTTTCTaGATGGCGTTTTCCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGGPGAF*MAFSSL Trigger: CAGGGAGGAAAACGCCATCCAGAAAGCCCCAGGTCC...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAAGGTTCAATTTGTCCTaGCTGACTGCTGCTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGRFNLS*LTAAGG Trigger: GCCGCCAGCAGCAGTCAGCCAGGACAAATTGAACCT...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGGTGTCTTGCGTCAGGTaGAAGAGGGCCTCCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRVSCVR*KRASSM Trigger: CATTGAGGAGGCCCTCTTCCACCTGACGCAAGACAC...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTGGTCACTAAGACCTTaGGGTGCTGGAGAAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRWSLRP*GAGEGR Trigger: ACGACCTTCTCCAGCACCTCAAGGTCTTAGTGACCA...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | AGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCAAAGGTGTCATTCCCTaGTCGCCTGGGTCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RYKLGRCGRAHSPLLRFSKGVIP*SPGSSA Trigger: GGCAGAGGACCCAGGCGAGCAGGGAATGACACCTTT...GCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTCTCTGGGTACAGTGCTaGACTCTGAAGAGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGLWVQC*TLKRLL Trigger: CAGGAGCCTCTTCAGAGTCCAGCACTGTACCCAGAG...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTCTCAGTCAGCACCTCTaGGTACAGTGCTGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGLSQHL*VQCWTL Trigger: CAGAGTCCAGCACTGTACCCAGAGGTGCTGACTGAG...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTGGCCAAGCTCTGCTTTaGGTCCTCTTCAAGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGGQALL*VLFKGR Trigger: TCTCCCCTTGAAGAGGACCCAAAGCAGAGCTTGGCC...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTCTGGACCTGCTGAACTaGGATGCTGGGAATAGCACC | + |
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Preference number: 4 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGLDLLN*DAGNST Trigger: GGTGCTATTCCCAGCATCCCAGTTCAGCAGGTCCAG...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGTGGAGAAGGTCGTGGTaGAAACAGGAGGCCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QIQTRQVWESSLAPPQIQWRRSW*KQEALW Trigger: CCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCA...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCCTCAGGGAAAAACCTaGCTTTTCCTCCTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QIQTRQVWESSLAPPQIQPQGKT*LFLLLG Trigger: CCCCAGGAGGAGGAAAAGTCAGGTTTTTCCCTGAGG...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCGTGGGGACACAGCCTaGTCACACAGATGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QIQTRQVWESSLAPPQIQRGDTA*SHRCPL Trigger: CAAAGGACATCTGTGTGATCAGGCTGTGTCCCCACG...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | AGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCGCCTTGGCCCGGAAGTaGTTGATGGAGAACATGTCC | + |
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Preference number: 4 (lower is better) Translates to: RYKLGRCGRAHSPLLRFSALARK*LMENMS Trigger: GGACATGTTCTCCATCAAGCACTTCCGGGCCAAGGC...GCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAAGCACAGGAATTGGCTaGGGCAGAAAGTCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGSTGIG*GRKSLF Trigger: GAACAAGGACTTTCTGCCCCAGCCAATTCCTGTGCT...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAGACACTGCTTGTTGTTaGGGTAGGAGTAAAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGDTACC*GRSKAD Trigger: GTCTGCTTTACTCCTACCTCAACAACAAGCAGTGTC...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTGAAAGGGGGCAGGACTaGAGATGGGGGCGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRAERGQD*RWGRAL Trigger: AAGGGCCCGCCCCCATCTCCAGTCCTGCCCCCTTTC...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGACAGTTAGAGTCACATTaGTGGTGCTGGTGCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGQLESH*WCWCQL Trigger: CAATTGGCACCAGCACCACCAATGTGACTCTAACTG...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCCTGGGGCTTTCTGGATaGCGTTTTCCTCCCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RYKLGRCGRAHSPLLRFSLGLSG*RFPPCS Trigger: TGAACAGGGAGGAAAACGCCATCCAGAAAGCCCCAG...GCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGCACAGTGAGCCACTTTaGGAAACAGGTCAACATTTC | + |
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Preference number: 4 (lower is better) Translates to: QTRQVWESSLAPPQIQHRHSEPL*ETGQHF Trigger: GAAATGTTGACCTGTTTCTCAAAGTGGCTCACTGTG...CCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTGGCCTGCTGAGCGGATaGCATCTGGGAGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRAGLLSG*HLGEPG Trigger: TCCAGGCTCTCCCAGATGTCATCCGCTCAGCAGGCC...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGAAGACCTTGAGGTGCTaGAGAAGGTCGTGGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QIQTRQVWESSLAPPQIQKTLRC*RRSWWK Trigger: TTTCCACCACGACCTTCTCCAGCACCTCAAGGTCTT...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | ATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCAATTTGTCCTGGCTaGCTGCTGCTGGCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: INIKQTAEQIQTRQVWESSICPG*LLLAAP Trigger: GGGAGCCGCCAGCAGCAGTCAGCCAGGACAAATTGA...GCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCACATGTCCCGAGACCCGTaGGGACACAGCCTGATCACA | + |
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Preference number: 4 (lower is better) Translates to: TSNRLQNRYKLGRCGRAHMSRDP*GHSLIT Trigger: TGTGATCAGGCTGTGTCCCCACGGGTCTCGGGACAT...GTGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCACCTGCTGCACAGTaGCCAGGCAGTGACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TSNRLQNRYKLGRCGRAHSPAAQ*PGSDTA Trigger: AGCAGTGTCACTGCCTGGCCACTGTGCAGCAGGTGA...GTGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTGAGCCAAGCTGCCCCTaGCCAAGCTCTGCTTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRAEPSCP*PSSALG Trigger: ACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTC...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTAGGGAATCCTGGCTTTaGGGCCACAGTGAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRARESWL*GHSEAW Trigger: CCAGGCCTCACTGTGGCCCCAAAGCCAGGATTCCCT...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | CAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGCTCCATCCTGGACCCTaGCTGGGCCTTGTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QKSTSNRLQNRYKLGRCGLHPGP*LGLVLW Trigger: CCAGAGGACAAGGCCCAGTCAGGGTCCAGGATGGAG...CCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | AACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCAGCTGTCCTTGGCCAATaGCAGGGAACACTGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: NIKQTAEQIQTRQVWESSAVLGQ*QGTLDL Trigger: CAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGC...TGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTAGCACAAACACTCCTTaGAGCCAAGCTGCCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRASTNTP*SQAAPG Trigger: GCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCT...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCTCCTCAATGCCCTCTaGGATGGCCTCTACCTCATC | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRALLNAL*DGLYLI Trigger: GATGAGGTAGAGGCCATCGCAGAGGGCATTGAGGAG...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGCTGGGCCTTGTCCTCTaGCCCCACCGGGTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IEPKINIKQTAEQIQTRQLGLVL*PHRVRW Trigger: CCACCTGACCCGGTGGGGCCAGAGGACAAGGCCCAG...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCATCCAGAGTCAGCATCTaGTCCAAGTCCCGTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: NIKQTAEQIQTRQVWESSSRVSI*SKSRGI Trigger: GATCCCACGGGACTTGGACCAGATGCTGACTCTGGA...TGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | AAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGCTGGCTCCCTCTGCGTaGTCCTGGCTTGAGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KINIKQTAEQIQTRQVWELAPSA*SWLESS Trigger: AGATGACTCAAGCCAGGATCACGCAGAGGGAGCCAG...CTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTAGAAGAAAGAAGCCTTaGGGGACCTGCAAAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRARRKKP*GTCKGL Trigger: GAGGCCTTTGCAGGTCCCCCAAGGCTTCTTTCTTCT...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGGTTCCAGCTCCATCCTaGACCCTGACTGGGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KINIKQTAEQIQTRQVWEVPAPS*TLTGPC Trigger: ACAAGGCCCAGTCAGGGTCCAGGATGGAGCTGGAAC...CTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTCATTCCCTGCTCGCCTaGGTCCTCTGCCCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCHSLLA*VLCPLL Trigger: CAGCAGAGGGCAGAGGACCCAGGCGAGCAGGGAATG...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGTGGAGGGCTGGGTaGGGCATTTTTGAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCGWRAG*GIFEPS Trigger: GCTGGGCTCAAAAATGCCCCACCCAGCCCTCCACCC...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAAACAGGAGGCCCTGTaGAGGTGCTGTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKSTSNRLQNRYKLGRCGKQEAL*RCCPWP Trigger: TGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTT...CCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGCTCGCCTGGGTCCTCTaGCCTCTGCTGATGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRLAWVL*PLLMRF Trigger: GAACCTCATCAGCAGAGGGCAGAGGACCCAGGCGAG...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTGACTTTTCCTCCTCCTaGGGACAGATTCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRADFSSS*GQIPHF Trigger: GAAGTGTGGAATCTGTCCCCAGGAGGAGGAAAAGTC...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGGGGAGGGTCCCCATCTaGTCTTTGACCAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KINIKQTAEQIQTRQVWEGRVPI*SLTKPQ Trigger: CTGAGGTTTGGTCAAAGACCAGATGGGGACCCTCCC...CTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGATCCTGGACCCTGACTaGGCCTTGTCCTCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IEPKINIKQTAEQIQTRQILDPD*ALSSGP Trigger: GGGGCCAGAGGACAAGGCCCAGTCAGGGTCCAGGAT...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCTCGCGCCTCCAGTCTaGGAAAATCCTTTTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRALAPPV*ENPFYW Trigger: CCAGTAAAAAGGATTTTCCCAGACTGGAGGCGCGAG...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCGCCTTCTCTTCCTTCTaGCTGAGTTGGTGTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: INIKQTAEQIQTRQVWESAFSSF*LSWCPT Trigger: AGTTGGACACCAACTCAGCCAGAAGGAAGAGAAGGC...GCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGTCCTTGGGGGCCAGCTaGATTGAGCTCATCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KINIKQTAEQIQTRQVWESLGAS*IELICT Trigger: GGTACAGATGAGCTCAATCCAGCTGGCCCCCAAGGA...CTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGCGCAGGAGCTGGACCTaGGGCTTTCTGGATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRRRSWT*GFLDGV Trigger: AACGCCATCCAGAAAGCCCCAGGTCCAGCTCCTGCG...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTCTGGAGCCTGTCCTGTaGCTCCTTAGGGGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCLEPVL*LLRGCL Trigger: GAGACACCCCCTAAGGAGCCACAGGACAGGCTCCAG...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | AACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCACGCATTCTCAGTTTCTaGAGGATCACTCTGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIKQTAEQIQTRQVWESSRILSF*RITLTR Trigger: CCTTGTCAGAGTGATCCTTCAGAAACTGAGAATGCG...TGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGGTGTCTCCCCAACTTTaGGCACCTCTGGAGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRVSPQL*APLERT Trigger: CGTCCTCTCCAGAGGTGCTCAAAGTTGGGGAGACAC...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTAGTTCCTTCTGTTGTTaGTCAATGATGTCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STSNRLQNRYKLGRCGRASSFCC*SMMSRP Trigger: GGGCCTGGACATCATTGAGCAACAACAGAAGGAACT...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTCCCCTGGCCAAGCTCTaGTTTGGGTCCTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCPLAKL*FGSSSR Trigger: CCTTGAAGAGGACCCAAAGCAGAGCTTGGCCAGGGG...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTCACCCAACTTCCACCTaGCTCTCCAGGCTCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCHPTST*LSRLSV Trigger: GACACTGAGCCTGGAGAGCCAGGTGGAAGTTGGGTG...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGCCCACCCAAGGGCTCTaGGGAGCTAGCACAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRPTQGL*GASTGI Trigger: AATTCCTGTGCTAGCTCCCCAGAGCCCTTGGGTGGG...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTAGAAGATCCCAGACATaGCTTGGAGGGAGGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCRRSQT*LGGRRP Trigger: AGGCCGCCTCCCTCCAAGCCATGTCTGGGATCTTCT...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | CAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGATACTACAGTGGATaGGGGGAGGGAATCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSTSNRLQNRYKLGRCGRYYSG*GEGILA Trigger: AGCCAGGATTCCCTCCCCCCATCCACTGTAGTATCT...CCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTTGGCCCGGAAGTGCTTaGTGGAGAACATGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCWPGSA*WRTCPV Trigger: CACTGGACATGTTCTCCATCAAGCACTTCCGGGCCA...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGAGGACCATTTTCACCTaGTGCACAGTGGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRRTIFT*CTVARQ Trigger: CTGCCTGGCCACTGTGCAGCAGGTGAAAATGGTCCT...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGGCCTCCAAAGAGCCCTaGGAATTCAAAAAGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KINIKQTAEQIQTRQVWEASKEP*EFKKVI Trigger: GATCACCTTTTTGAATTCCCAGGGCTCTTTGGAGGC...CTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGGTAGGCTGCACTCTCTaGGCACTATGGGTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRVGCTL*ALWVPS Trigger: TGATGGAACCCATAGTGCCCAGAGAGTGCAGCCTAC...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGCAAGGGGAGATGAGGTaGCCTCTGACCTCCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IEPKINIKQTAEQIQTRQQGEMR*PLTSYP Trigger: AGGATAGGAGGTCAGAGGCCACCTCATCTCCCCTTG...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR GCA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGACTAAGACCTTGAGGTaGTGGAGAAGGTCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEPKINIKQTAEQIQTRQTKTLR*WRRSWW Trigger: CCACCACGACCTTCTCCAGCACCTCAAGGTCTTAGT...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGGAGTGTAGGATCCTCTaGGGAAACCATTCCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRECRIL*GNHSFD Trigger: GTCGAAGGAATGGTTTCCCCAGAGGATCCTACACTC...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGCACAAGCCTGATTCCTaGCCCAGTGTAGACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRHKPDS*PSVDIV Trigger: TACTATGTCTACACTGGGTCAGGAATCAGGCTTGTG...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR TCA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTCTGTTGTTGCTCAATaGTGTCCAGGCCCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRSVVAQ*CPGPFS Trigger: AGAGAAAGGGCCTGGACATCATTGAGCAACAACAGA...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGTCTAGGGAAGCTCTGTaGAGCACAAACACTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEPKINIKQTAEQIQTRQSREAL*STNTPW Trigger: CCAAGGAGTGTTTGTGCTCCACAGAGCTTCCCTAGA...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS-3UTR CCA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGAAAATCCTTTTTACTaGCTCCCTCTGCGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCENPFY*LPLRDP Trigger: AGGATCACGCAGAGGGAGCCAGTAAAAAGGATTTTC...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 90 bp | AGGCGGCCTGCTGAGCGGATGACATCTGGGAGAGCCTGGACAAGCTaGCAGCTGTGTCCCGAGATCAGCTGGGCCTTGGCCCGGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPAERMTSGRAWTS*QLCPEISWALARKC Trigger: GCACTTCCGGGCCAAGGCCCAGCTGATCTCGGGACACAGCTGTCAGCTTGTCCAGGCTCTCCCAGATGTCATCCGCTCAGCAGGCCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 90 bp | ATTGGCTGGGGCAGAAAGTCCTTGTTCCAGCTCCATCCTGGACCCTaGCTGGGCCTTGTCCTCTGGCCCCACCGGGTCAGGTGGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IGWGRKSLFQLHPGP*LGLVLWPHRVRWSA Trigger: GGCACTCCACCTGACCCGGTGGGGCCAGAGGACAAGGCCCAGTCAGGGTCCAGGATGGAGCTGGAACAAGGACTTTCTGCCCCAGCCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 90 bp | GACAGCTGTGTCCCGAGATCAGCTGGGCCTTGGCCCGGAAGTGCTTaGTGGAGAACATGTCCAGTGAGCCCTCCCAGGGTGGAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSCVPRSAGPWPGSA*WRTCPVSPPRVEGW Trigger: CCAGCCCTCCACCCTGGGAGGGCTCACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAAGGCCCAGCTGATCTCGGGACACAGCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 90 bp | CTCCTGGTCCCGCCAGCGGGACAGCTCCTTGGGGGCCAGCTGGATTaGGCTCATCTGTACCAGGTTGTTAGGGGTGACGTCACAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLVPPAGQLLGGQLD*AHLYQVVRGDVTVS Trigger: GCTCACTGTGACGTCACCCCTAACAACCTGGTACAGATGAGCTCAATCCAGCTGGCCCCCAAGGAGCTGTCCCGCTGGCGGGACCAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CCA 90 bp | CTCTCCTCCTGGTCCCGCCAGCGGGACAGCTCCTTGGGGGCCAGCTaGATTGAGCTCATCTGTACCAGGTTGTTAGGGGTGACGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSWSRQRDSSLGAS*IELICTRLLGVTSQ Trigger: CTGTGACGTCACCCCTAACAACCTGGTACAGATGAGCTCAATCCAGCTGGCCCCCAAGGAGCTGTCCCGCTGGCGGGACCAGGAGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS-3UTR CAA 90 bp | CAGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGGACCCTGACTGGGCCTaGTCCTCTGGCCCCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QIQTRQVWESSLAPPQIQDPDWA*SSGPTG Trigger: CCCGGTGGGGCCAGAGGACAAGGCCCAGTCAGGGTC...CTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 90 bp | AACGCCAGGTCGGGAAGCTCCTGGGCACGAGTCCACAGCACCTCCTaGATGGCACGGACCACAGTAGATCGCACTCCAGCATCCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NARSGSSWARVHSTS*MARTTVDRTPASKG Trigger: ACCTTTGGATGCTGGAGTGCGATCTACTGTGGTCCGTGCCATGCAGGAGGTGCTGTGGACTCGTGCCCAGGAGCTTCCCGACCTGGCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | ATGGCCTCTACCTCATCTTCCCTCAACGCCAGGTCGGGAAGCTCCTaGGCACGAGTCCACAGCACCTCCTGCATGGCACGGACCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MASTSSSLNARSGSS*ARVHSTSCMARTTV Trigger: TACTGTGGTCCGTGCCATGCAGGAGGTGCTGTGGACTCGTGCCCAGGAGCTTCCCGACCTGGCGTTGAGGGAAGATGAGGTAGAGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | CCTCCCCCTGCCTCTAGGGAAGCTCTGTGGAGCACAAACACTCCTTaGAGCCAAGCTGCCCCTGGCCAAGCTCTGCTTTGGGTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPASREALWSTNTP*SQAAPGQALLWVLF Trigger: GAAGAGGACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCTCCACAGAGCTTCCCTAGAGGCAGGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 90 bp | GGAGCACAAACACTCCTTGGAGCCAAGCTGCCCCTGGCCAAGCTCTaGTTTGGGTCCTCTTCAAGGGGAGATGAGGTGGCCTCTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAQTLLGAKLPLAKL*FGSSSRGDEVASDL Trigger: GAGGTCAGAGGCCACCTCATCTCCCCTTGAAGAGGACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 90 bp | AGGTGCTGGAGAAGGTCGTGGTGGAAACAGGAGGCCCTGTGGAGGTaGTGTCCTTGGCCAATGCCAGGGAACACTGGACCTGCTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RCWRRSWWKQEALWR*CPWPMPGNTGPAEL Trigger: CAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCAGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | AGAAGGTCGTGGTGGAAACAGGAGGCCCTGTGGAGGTGCTGTCCTTaGCCAATGCCAGGGAACACTGGACCTGCTGAACTGGGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSWWKQEALWRCCP*PMPGNTGPAELGCW Trigger: CCAGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | ACCTTGAGGTGCTGGAGAAGGTCGTGGTGGAAACAGGAGGCCCTGTaGAGGTGCTGTCCTTGGCCAATGCCAGGGAACACTGGACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLRCWRRSWWKQEAL*RCCPWPMPGNTGPA Trigger: AGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCAGCACCTCAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 90 bp | GTGGAGGTGCTGTCCTTGGCCAATGCCAGGGAACACTGGACCTGCTaGACTGGGATGCTGGGAATAGCACCAGGCTGCTTCTGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: VEVLSLANAREHWTC*TGMLGIAPGCFWRP Trigger: TGGTCTCCAGAAGCAGCCTGGTGCTATTCCCAGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 90 bp | TCTGGACTTGTCCAAGGCCGCTTCTTCACATGTGTAGGTCTTCTCTaGTCTAGGGGTGCACCATCGAGCCCACCCAAGGGCTCTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLVQGRFFTCVGLL*SRGAPSSPPKGSGE Trigger: CTCCCCAGAGCCCTTGGGTGGGCTCGATGGTGCACCCCTAGAGCAGAGAAGACCTACACATGTGAAGAAGCGGCCTTGGACAAGTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | TCCACCTGGCTCTCCAGGCTCAGTGTCCTTAGAAGAAAGAAGCCTTaGGGGACCTGCAAAGGCCTCTGGAGAAGCACACTCGGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: STWLSRLSVLRRKKP*GTCKGLWRSTLGRV Trigger: GACCCTCCCGAGTGTGCTTCTCCAGAGGCCTTTGCAGGTCCCCCAAGGCTTCTTTCTTCTAAGGACACTGAGCCTGGAGAGCCAGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 90 bp | CTCCCCAACTTTGAGCACCTCTGGAGAGGACGCAGGAGCTGGACCTaGGGCTTTCTGGATGGCGTTTTCCTCCCTGTTCATGATGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPNFEHLWRGRRSWT*GFLDGVFLPVHDDP Trigger: GGGGTCATCATGAACAGGGAGGAAAACGCCATCCAGAAAGCCCCAGGTCCAGCTCCTGCGTCCTCTCCAGAGGTGCTCAAAGTTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 90 bp | GGTGCTGTCCTTGGCCAATGCCAGGGAACACTGGACCTGCTGAACTaGGATGCTGGGAATAGCACCAGGCTGCTTCTGGAGACCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAVLGQCQGTLDLLN*DAGNSTRLLLETTV Trigger: GACAGTGGTCTCCAGAAGCAGCCTGGTGCTATTCCCAGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | AGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCCGGGGATCTCGCAGGTaGAAGAGCAGGCTGCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RYKLGRCGRAHSPLLRFSRGSRR*KSRLRY Trigger: GTACCGCAGCCTGCTCTTCAACCTGCGAGATCCCCG...GCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | GCTGAGTTGGTGTCCAACTCCTCCAGAGGTTCAATTTGTCCTGGCTaGCTGCTGCTGGCGGCTCCCACAAGCCTGATTCCTGACCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AELVSNSSRGSICPG*LLLAAPTSLIPDPV Trigger: CACTGGGTCAGGAATCAGGCTTGTGGGAGCCGCCAGCAGCAGTCAGCCAGGACAAATTGAACCTCTGGAGGAGTTGGACACCAACTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTTGGCCAAGCTCTGCTTaGGGTCCTCTTCAAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGWPSSA*GPLQGE Trigger: CTCCCCTTGAAGAGGACCCAAAGCAGAGCTTGGCCA...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | TCTGTAGAATCCTCAGTCAGCACCTCTGGGTACAGTGCTGGACTCTaGAGAGGCTCCTGGGTGACCAGACTAAGGGGCTCGCCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVESSVSTSGYSAGL*RGSWVTRLRGSPPK Trigger: CTTTGGAGGCGAGCCCCTTAGTCTGGTCACCCAGGAGCCTCTTCAGAGTCCAGCACTGTACCCAGAGGTGCTGACTGAGGATTCTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 90 bp | CGGGCCCTTTGCACTGAGCCCCTCTTTGCTGAGTGTAGGATCCTCTaGGGAAACCATTCCTTCGACAGTGGTGGCTTGTCTAAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RALCTEPLFAECRIL*GNHSFDSGGLSKAG Trigger: CCCAGCTTTAGACAAGCCACCACTGTCGAAGGAATGGTTTCCCCAGAGGATCCTACACTCAGCAAAGAGGGGCTCAGTGCAAAGGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | AAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTCTGCGTGATCCTGGCTaGAGTCATCTGGACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLGRCGRAHSPLLRFSIGLRDPG*SHLDLS Trigger: GGACAAGTCCAGATGACTCAAGCCAGGATCACGCAG...ACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 90 bp | TCCTTTGCCTTAGATGGGCCCATACTATCTAGAAGATCCCAGACATaGCTTGGAGGGAGGCGGCCTGCTGAGCGGATGACATCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFALDGPILSRRSQT*LGGRRPAERMTSGR Trigger: TCTCCCAGATGTCATCCGCTCAGCAGGCCGCCTCCCTCCAAGCCATGTCTGGGATCTTCTAGATAGTATGGGCCCATCTAAGGCAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | GGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCATCGGTAAAGGAGTCCCCATCTGGTCTTaGACCAAACCTCAGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRCGRAHSPLLRFSIGKGVPIWS*TKPQGK Trigger: TTTTCCCTGAGGTTTGGTCAAAGACCAGATGGGGAC...TCCTTTACCGATGCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | GTCAGCATCTGGTCCAAGTCCCGTGGGATCTCTACCTCGCCCTTGTaGGTCAGTTTGGAGGCCGGAAGTCTGTACAGTTCCTTCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSIWSKSRGISTSPL*VSLEAGSLYSSFCC Trigger: ACAACAGAAGGAACTGTACAGACTTCCGGCCTCCAAACTGACTCACAAGGGCGAGGTAGAGATCCCACGGGACTTGGACCAGATGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
||
| CDS-3UTR CAA 90 bp | AGATACAAACTAGGCAGGTGTGGGAGAGCTCACTCGCCCCTCCTCAGATTCAGCTTGGCCCGGAAGTGCTaGATGGAGAACATGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RYKLGRCGRAHSPLLRFSLARKC*MENMSS Trigger: ACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAA...GCTGAATCTGAGGAGGGGCGAGTGAGCTCTCCCACACCTGCCTAGTTTGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCGATCCCAGACATGGCTaGGAGGGAGGCGGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INIKQTAEQIQTRQVWESDPRHG*EGGGLL Trigger: CAGCAGGCCGCCTCCCTCCAAGCCATGTCTGGGATC...GCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | TTTTCACCTGCTGCACAGTGGCCAGGCAGTGACACTGCTTGTTGTTaGGGTAGGAGTAAAGCAGACGGTAGTTCTGGATGTCCCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSPAAQWPGSDTACC*GRSKADGSSGCPET Trigger: GGTCTCGGGACATCCAGAACTACCGTCTGCTTTACTCCTACCTCAACAACAAGCAGTGTCACTGCCTGGCCACTGTGCAGCAGGTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 90 bp | GTTTTCAACCTCGGTTTCTACAGCACATTCCACCCAACTTCCACCTaGCTCTCCAGGCTCAGTGTCCTTAGAAGAAAGAAGCCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFNLGFYSTFHPTST*LSRLSVLRRKKPWG Trigger: CCCCCAAGGCTTCTTTCTTCTAAGGACACTGAGCCTGGAGAGCCAGGTGGAAGTTGGGTGGAATGTGCTGTAGAAACCGAGGTTGAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | TCTGGGAAAATCCTTTTTACTGGCTCCCTCTGCGTGATCCTGGCTTaGGTCATCTGGACTTGTCCAAGGCCGCTTCTTCACATGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKILFTGSLCVILA*VIWTCPRPLLHMCR Trigger: CCTACACATGTGAAGAAGCGGCCTTGGACAAGTCCAGATGACTCAAGCCAGGATCACGCAGAGGGAGCCAGTAAAAAGGATTTTCCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | TGGATTGAGCTCATCTGTACCAGGTTGTTAGGGGTGACGTCACAGTaGGCCACTTTGAGAAACAGGTCAACATTTCGGGGATCTCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WIELICTRLLGVTSQ*ATLRNRSTFRGSRR Trigger: CCTGCGAGATCCCCGAAATGTTGACCTGTTTCTCAAAGTGGCTCACTGTGACGTCACCCCTAACAACCTGGTACAGATGAGCTCAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
||
| CDS-3UTR CAA 90 bp | AACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCAGCACTGAGCCCCTCTTaGCTGAGTGTAGGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NIKQTAEQIQTRQVWESSALSPS*LSVGSS Trigger: AGAGGATCCTACACTCAGCAAAGAGGGGCTCAGTGC...TGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | TCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTTGGGGCAGAAAGTCCTaGTTCCAGCTCCATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STSNRLQNRYKLGRCGRAWGRKS*FQLHPG Trigger: TCCAGGATGGAGCTGGAACAAGGACTTTCTGCCCCA...AGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCGAGCTAGCACAGGAATaGGCTGGGGCAGAAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: INIKQTAEQIQTRQVWESELAQE*AGAESP Trigger: AGGACTTTCTGCCCCAGCCAATTCCTGTGCTAGCTC...GCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 90 bp | TTCCTCCCTGTTCATGATGACCCCGGAGAAGGCTGGCAGTTTAGTTaGGGATTTCCGATCCGTGCAGATTTGACAGTTAGAGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: FLPVHDDPGEGWQFS*GFPIRADLTVRVTL Trigger: CAATGTGACTCTAACTGTCAAATCTGCACGGATCGGAAATCCTCAACTAAACTGCCAGCCTTCTCCGGGGTCATCATGAACAGGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | AACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCAATGGTCACTAAGACCTaGAGGTGCTGGAGAAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NIKQTAEQIQTRQVWESSMVTKT*RCWRRS Trigger: CGACCTTCTCCAGCACCTCAAGGTCTTAGTGACCAT...TGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCTCACCCGATCCGTGCAGATTaGACAGTTAGAGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TSNRLQNRYKLGRCGRAHPIRAD*TVRVTL Trigger: CAATGTGACTCTAACTGTCAAATCTGCACGGATCGG...GTGAGCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | AACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTCTGGGTGGGGCATTTTaGAGCCCAGCAGGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQKSTSNRLQNRYKLGRCLGGAF*SPAGIW Trigger: CCAGATGCCTGCTGGGCTCAAAAATGCCCCACCCAG...ACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGGAGCACAAACACTCCTaGGAGCCAAGCTGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LNQKSTSNRLQNRYKLGREHKHS*EPSCPW Trigger: CCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCTC...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGAGATCAGCTGGGCCTaGGCCCGGAAGTGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IEPKINIKQTAEQIQTRQEISWA*ARKCLM Trigger: CATCAAGCACTTCCGGGCCAAGGCCCAGCTGATCTC...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGTGTGGGAGAGCGTACAGTTCCTTCTGTaGTTGCTCAATGATGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: INIKQTAEQIQTRQVWESVQFLL*LLNDVQ Trigger: CTGGACATCATTGAGCAACAACAGAAGGAACTGTAC...GCTCTCCCACACCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGCTCCAGAGGTTCAATTaGTCCTGGCTGACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IEPKINIKQTAEQIQTRQLQRFN*SWLTAA Trigger: AGCAGCAGTCAGCCAGGACAAATTGAACCTCTGGAG...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | ATTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGTTCCTTCTGGCTGAGTaGGTGTCCAACTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IEPKINIKQTAEQIQTRQFLLAE*VSNSSR Trigger: TCTGGAGGAGTTGGACACCAACTCAGCCAGAAGGAA...CTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS-3UTR CAA 90 bp | TTGAACCAAAAATCAACATCAAACAGACTGCAGAACAGATACAAACTAGGCAGGATCCTTTCCACTCTTTaGCTGAAGGACACGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNQKSTSNRLQNRYKLGRILSTL*LKDTVF Trigger: AAAGACCGTGTCCTTCAGCAAAAGAGTGGAAAGGAT...CCTGCCTAGTTTGTATCTGTTCTGCAGTCTGTTTGATGTTGATTTTTGGTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS GCA 72 bp | GGGCCTTGTCCTCTGGCCCCACCGGGTCAGGTGGAGTaGCAGGGCTGCCAACCACAAACGCGGGCTGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: GPCPLAPPGQVE*QGCQPQTRAVL Trigger: AAGTACAGCCCGCGTTTGTGGTTGGCAGCCCTGGCACTCCACCTGACCCGGTGGGGCCAGAGGACAAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS GCA 72 bp | CCTCTGGCCCCACCGGGTCAGGTGGAGTGCCAGGGCTaGCAACCACAAACGCGGGCTGTACTTCCTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLAPPGQVECQG*QPQTRAVLPAD Trigger: ATCAGCAGGAAGTACAGCCCGCGTTTGTGGTTGGCAGCCCTGGCACTCCACCTGACCCGGTGGGGCCAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 72 bp | GGCAGAAAGTCCTTGTTCCAGCTCCATCCTGGACCCTaGCTGGGCCTTGTCCTCTGGCCCCACCGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRKSLFQLHPGP*LGLVLWPHRVR Trigger: CCTGACCCGGTGGGGCCAGAGGACAAGGCCCAGTCAGGGTCCAGGATGGAGCTGGAACAAGGACTTTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 72 bp | ACCTCATCTTCCCTCAACGCCAGGTCGGGAAGCTCCTaGGCACGAGTCCACAGCACCTCCTGCATGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSSLNARSGSS*ARVHSTSCMAR Trigger: CCGTGCCATGCAGGAGGTGCTGTGGACTCGTGCCCAGGAGCTTCCCGACCTGGCGTTGAGGGAAGATGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CAA 90 bp | TCCAGGCCCTTTCTCTCCTCCTGGTCCCGCCAGCGGGACAGCTCCTaGGGGGCCAGCTGGATTGAGCTCATCTGTACCAGGTTGTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRPFLSSWSRQRDSS*GASWIELICTRLLG Trigger: CCCTAACAACCTGGTACAGATGAGCTCAATCCAGCTGGCCCCCAAGGAGCTGTCCCGCTGGCGGGACCAGGAGGAGAGAAAGGGCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
||
| CDS TCA 72 bp | CTTGGCCCGGAAGTGCTTGATGGAGAACATGTCCAGTaGGCCCTCCCAGGGTGGAGGGCTGGGTGGGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LGPEVLDGEHVQ*ALPGWRAGWGI Trigger: AATGCCCCACCCAGCCCTCCACCCTGGGAGGGCTCACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 72 bp | GTCCCGAGATCAGCTGGGCCTTGGCCCGGAAGTGCTTaGTGGAGAACATGTCCAGTGAGCCCTCCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPRSAGPWPGSA*WRTCPVSPPRV Trigger: CACCCTGGGAGGGCTCACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAAGGCCCAGCTGATCTCGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 72 bp | GCTGAGCGGATGACATCTGGGAGAGCCTGGACAAGCTaGCAGCTGTGTCCCGAGATCAGCTGGGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AERMTSGRAWTS*QLCPEISWALA Trigger: GGCCAAGGCCCAGCTGATCTCGGGACACAGCTGTCAGCTTGTCCAGGCTCTCCCAGATGTCATCCGCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS GCA 72 bp | TCGGGAAGCTCCTGGGCACGAGTCCACAGCACCTCCTaGATGGCACGGACCACAGTAGATCGCACTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGSSWARVHSTS*MARTTVDRTPA Trigger: TGCTGGAGTGCGATCTACTGTGGTCCGTGCCATGCAGGAGGTGCTGTGGACTCGTGCCCAGGAGCTTCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 72 bp | GAAAGTCCTTGTTCCAGCTCCATCCTGGACCCTGACTaGGCCTTGTCCTCTGGCCCCACCGGGTCAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ESPCSSSILDPD*ALSSGPTGSGG Trigger: TCCACCTGACCCGGTGGGGCCAGAGGACAAGGCCCAGTCAGGGTCCAGGATGGAGCTGGAACAAGGACTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CAA 90 bp | GCACCATCGAGCCCACCCAAGGGCTCTGGGGAGCTAGCACAGGAATaGGCTGGGGCAGAAAGTCCTTGTTCCAGCTCCATCCTGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: APSSPPKGSGELAQE*AGAESPCSSSILDP Trigger: AGGGTCCAGGATGGAGCTGGAACAAGGACTTTCTGCCCCAGCCAATTCCTGTGCTAGCTCCCCAGAGCCCTTGGGTGGGCTCGATGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 72 bp | AGACATGGCTTGGAGGGAGGCGGCCTGCTGAGCGGATaGCATCTGGGAGAGCCTGGACAAGCTGACAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHGLEGGGLLSG*HLGEPGQADSC Trigger: ACAGCTGTCAGCTTGTCCAGGCTCTCCCAGATGTCATCCGCTCAGCAGGCCGCCTCCCTCCAAGCCATGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS TCA 72 bp | AAGATCCCAGACATGGCTTGGAGGGAGGCGGCCTGCTaGGCGGATGACATCTGGGAGAGCCTGGACAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KIPDMAWREAAC*ADDIWESLDKL Trigger: CAGCTTGTCCAGGCTCTCCCAGATGTCATCCGCTCAGCAGGCCGCCTCCCTCCAAGCCATGTCTGGGATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS GCA 72 bp | CTGTGTCCCGAGATCAGCTGGGCCTTGGCCCGGAAGTaGTTGATGGAGAACATGTCCAGTGAGCCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPEISWALARK*LMENMSSEPSQ Trigger: CTGGGAGGGCTCACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAAGGCCCAGCTGATCTCGGGACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CCA 72 bp | TCAGGTGGAAGAGGGCCTCCTCAATGCCCTCTGCGATaGCCTCTACCTCATCTTCCCTCAACGCCAGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGRGPPQCPLR*PLPHLPSTPGR Trigger: CCGACCTGGCGTTGAGGGAAGATGAGGTAGAGGCCATCGCAGAGGGCATTGAGGAGGCCCTCTTCCACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
||
| CDS CCA 72 bp | ACCTCATCTTCCCTCAACGCCAGGTCGGGAAGCTCCTaGGCACTCCTGCATGGCACGGACCACAGTAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: TSSSLNARSGSS*ALLHGTDHSRS Trigger: CGATCTACTGTGGTCCGTGCCATGCAGGAGTGCCCAGGAGCTTCCCGACCTGGCGTTGAGGGAAGATGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128007.8 |
||
| CDS CAA 72 bp | CTGTCCTGTGGCTCCTTAGGGGGTGTCTCCCCAACTTaGAGCACCTCTGGAGAGGACGCAGGAGCTGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LSCGSLGGVSPT*STSGEDAGAGP Trigger: AGGTCCAGCTCCTGCGTCCTCTCCAGAGGTGCTCAAAGTTGGGGAGACACCCCCTAAGGAGCCACAGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
||
| CDS CAA 72 bp | TGTCCCGAGATCAGCTGGGCCTTGGCCCGGAAGTGCTaGATGGAGAACATGTCCAGTGAGCCCTCCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CPEISWALARKC*MENMSSEPSQG Trigger: ACCCTGGGAGGGCTCACTGGACATGTTCTCCATCAAGCACTTCCGGGCCAAGGCCCAGCTGATCTCGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CAA 72 bp | TCCTTGGAGCCAAGCTGCCCCTGGCCAAGCTCTGCTTaGGGTCCTCTTCAAGGGGAGATGAGGTGGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLEPSCPWPSSA*GPLQGEMRWPL Trigger: CAGAGGCCACCTCATCTCCCCTTGAAGAGGACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | GTCCAAGGCCGCTTCTTCACATGTGTAGGTCTTCTCTaGTCTAGGGGTGCACCATCGAGCCCACCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VQGRFFTCVGLL*SRGAPSSPPKG Trigger: GCCCTTGGGTGGGCTCGATGGTGCACCCCTAGAGCAGAGAAGACCTACACATGTGAAGAAGCGGCCTTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | TTGCGTCAGGTGGAAGAGGGCCTCCTCAATGCCCTCTaGGATGGCCTCTACCTCATCTTCCCTCAACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRQVEEGLLNAL*DGLYLIFPQRQ Trigger: CTGGCGTTGAGGGAAGATGAGGTAGAGGCCATCGCAGAGGGCATTGAGGAGGCCCTCTTCCACCTGACGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS GCA 72 bp | AACAGGAGGCCCTGTGGAGGTGCTGTCCTTGGCCAATaGCAGGGAACACTGGACCTGCTGAACTGGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: NRRPCGGAVLGQ*QGTLDLLNWDA Trigger: AGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | AGAAGGTCGTGGTGGAAACAGGAGGCCCTGTGGAGGTaGTGTCCTTGGCCAATGCCAGGGAACACTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: RRSWWKQEALWR*CPWPMPGNTGP Trigger: AGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CCCAACTTTGAGCACCTCTGGAGAGGACGCAGGAGCTaGACCTGGGGCTTTCTGGATGGCGTTTTCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PNFEHLWRGRRS*TWGFLDGVFLP Trigger: AGGGAGGAAAACGCCATCCAGAAAGCCCCAGGTCCAGCTCCTGCGTCCTCTCCAGAGGTGCTCAAAGTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GCCTCTAGGGAAGCTCTGTGGAGCACAAACACTCCTTaGAGCCAAGCTGCCCCTGGCCAAGCTCTGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: ASREALWSTNTP*SQAAPGQALLW Trigger: CCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCTCCACAGAGCTTCCCTAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | TGGTGGAAACAGGAGGCCCTGTGGAGGTGCTGTCCTTaGCCAATGCCAGGGAACACTGGACCTGCTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: WWKQEALWRCCP*PMPGNTGPAEL Trigger: CAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | TGCTGGAGAAGGTCGTGGTGGAAACAGGAGGCCCTGTaGAGGTGCTGTCCTTGGCCAATGCCAGGGAACACT | + |
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Preference number: 6 (lower is better) Translates to: CWRRSWWKQEAL*RCCPWPMPGNT Trigger: AGTGTTCCCTGGCATTGGCCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CAA 72 bp | AGCCCACCCAAGGGCTCTGGGGAGCTAGCACAGGAATaGGCTGGGGCAGAAAGTCCTTGTTCCAGCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SPPKGSGELAQE*AGAESPCSSSI Trigger: GATGGAGCTGGAACAAGGACTTTCTGCCCCAGCCAATTCCTGTGCTAGCTCCCCAGAGCCCTTGGGTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CAA 90 bp | GAAGAGCAGGCTGCGGTACTTGTTCTTGTAGCGGAGGTTGGTGTCTaGCGTCAGGTGGAAGAGGGCCTCCTCAATGCCCTCTGCGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: EEQAAVLVLVAEVGV*RQVEEGLLNALCDG Trigger: GCCATCGCAGAGGGCATTGAGGAGGCCCTCTTCCACCTGACGCAAGACACCAACCTCCGCTACAAGAACAAGTACCGCAGCCTGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CAA 90 bp | CACAAACACTCCTTGGAGCCAAGCTGCCCCTGGCCAAGCTCTGCTTaGGGTCCTCTTCAAGGGGAGATGAGGTGGCCTCTGACCTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: HKHSLEPSCPWPSSA*GPLQGEMRWPLTSY Trigger: ATAGGAGGTCAGAGGCCACCTCATCTCCCCTTGAAGAGGACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | CTGTCCTTGGCCAATGCCAGGGAACACTGGACCTGCTaGACTGGGATGCTGGGAATAGCACCAGGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLANAREHWTC*TGMLGIAPGCF Trigger: GAAGCAGCCTGGTGCTATTCCCAGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | ACCCAAGGGCTCTGGGGAGCTAGCACAGGAATTGGCTaGGGCAGAAAGTCCTTGTTCCAGCTCCATCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TQGLWGASTGIG*GRKSLFQLHPG Trigger: TCCAGGATGGAGCTGGAACAAGGACTTTCTGCCCCAGCCAATTCCTGTGCTAGCTCCCCAGAGCCCTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CTTGGCCAATGCCAGGGAACACTGGACCTGCTGAACTaGGATGCTGGGAATAGCACCAGGCTGCTTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGQCQGTLDLLN*DAGNSTRLLLE Trigger: CTCCAGAAGCAGCCTGGTGCTATTCCCAGCATCCCAGTTCAGCAGGTCCAGTGTTCCCTGGCATTGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GTCACTAAGACCTTGAGGTGCTGGAGAAGGTCGTGGTaGAAACAGGAGGCCCTGTGGAGGTGCTGTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTKTLRCWRRSW*KQEALWRCCPW Trigger: CCAAGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCAGCACCTCAAGGTCTTAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | GTGTCCAACTCCTCCAGAGGTTCAATTTGTCCTGGCTaGCTGCTGCTGGCGGCTCCCACAAGCCTGATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSNSSRGSICPG*LLLAAPTSLIP Trigger: AGGAATCAGGCTTGTGGGAGCCGCCAGCAGCAGTCAGCCAGGACAAATTGAACCTCTGGAGGAGTTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | AGCTCTGTGGAGCACAAACACTCCTTGGAGCCAAGCTaGCCCTGGCCAAGCTCTGCTTTGGGTCCTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSVEHKHSLEPS*PWPSSALGPLQ Trigger: TTGAAGAGGACCCAAAGCAGAGCTTGGCCAGGGGCAGCTTGGCTCCAAGGAGTGTTTGTGCTCCACAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GGTGACCAGACTAAGGGGCTCGCCTCCAAAGAGCCCTaGGAATTCAAAAAGGTGATCAAGGCTGTCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDQTKGLASKEP*EFKKVIKAVWR Trigger: GCGCCAGACAGCCTTGATCACCTTTTTGAATTCCCAGGGCTCTTTGGAGGCGAGCCCCTTAGTCTGGTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GTTGGTGTCCAACTCCTCCAGAGGTTCAATTTGTCCTaGCTGACTGCTGCTGGCGGCTCCCACAAGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VGVQLLQRFNLS*LTAAGGSHKPD Trigger: ATCAGGCTTGTGGGAGCCGCCAGCAGCAGTCAGCCAGGACAAATTGAACCTCTGGAGGAGTTGGACACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | TCGACAGGGGCTGTAGGCTGCACTCTCTGGGCACTATaGGTTCCATCAGGTCTTCCAGAGTCAGCATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: STGAVGCTLWAL*VPSGLPESASG Trigger: ACCAGATGCTGACTCTGGAAGACCTGATGGAACCCATAGTGCCCAGAGAGTGCAGCCTACAGCCCCTGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | ATGGTCACTAAGACCTTGAGGTGCTGGAGAAGGTCGTaGTGGAAACAGGAGGCCCTGTGGAGGTGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MVTKTLRCWRRS*WKQEALWRCCP Trigger: AGGACAGCACCTCCACAGGGCCTCCTGTTTCCACCACGACCTTCTCCAGCACCTCAAGGTCTTAGTGACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | ATCCAAAGGTGTCATTCCCTGCTCGCCTGGGTCCTCTaGCCTCTGCTGATGAGGTTCCGCATTCTCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: IQRCHSLLAWVL*PLLMRFRILSF Trigger: GAAACTGAGAATGCGGAACCTCATCAGCAGAGGGCAGAGGACCCAGGCGAGCAGGGAATGACACCTTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CTCTCCAGGCTCAGTGTCCTTAGAAGAAAGAAGCCTTaGGGGACCTGCAAAGGCCTCTGGAGAAGCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: LSRLSVLRRKKP*GTCKGLWRSTL Trigger: GAGTGTGCTTCTCCAGAGGCCTTTGCAGGTCCCCCAAGGCTTCTTTCTTCTAAGGACACTGAGCCTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GCACTCGCGCCTCCAGTCTGGGAAAATCCTTTTTACTaGCTCCCTCTGCGTGATCCTGGCTTGAGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAPPVWENPFY*LPLRDPGLSHL Trigger: CAGATGACTCAAGCCAGGATCACGCAGAGGGAGCCAGTAAAAAGGATTTTCCCAGACTGGAGGCGCGAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CAGGTCTTCCAGAGTCAGCATCTGGTCCAAGTCCCGTaGGATCTCTACCTCGCCCTTGTGAGTCAGTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QVFQSQHLVQVP*DLYLALVSQFG Trigger: TCCAAACTGACTCACAAGGGCGAGGTAGAGATCCCACGGGACTTGGACCAGATGCTGACTCTGGAAGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CCA 72 bp | TTAGATGGGCCCATACTATCTAGAAGATCCCAGACATaGCTTGGAGGGAGGCGGCCTGCTGAGCGGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: LDGPILSRRSQT*LGGRRPAERMT Trigger: TGTCATCCGCTCAGCAGGCCGCCTCCCTCCAAGCCATGTCTGGGATCTTCTAGATAGTATGGGCCCATCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | AGCTCTGCTTTGGGTCCTCTTCAAGGGGAGATGAGGTaGCCTCTGACCTCCTATCCTCTGGTGAGTAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSALGPLQGEMR*PLTSYPLVSRG Trigger: TCCTCTACTCACCAGAGGATAGGAGGTCAGAGGCCACCTCATCTCCCCTTGAAGAGGACCCAAAGCAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | ATCTGTAGAATCCTCAGTCAGCACCTCTGGGTACAGTaGTGGACTCTGAAGAGGCTCCTGGGTGACCAGACT | + |
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Preference number: 6 (lower is better) Translates to: ICRILSQHLWVQ*WTLKRLLGDQT Trigger: AGTCTGGTCACCCAGGAGCCTCTTCAGAGTCCAGCACTGTACCCAGAGGTGCTGACTGAGGATTCTACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | TGTAGAATCCTCAGTCAGCACCTCTGGGTACAGTGCTaGACTCTGAAGAGGCTCCTGGGTGACCAGACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRILSQHLWVQC*TLKRLLGDQTK Trigger: CTTAGTCTGGTCACCCAGGAGCCTCTTCAGAGTCCAGCACTGTACCCAGAGGTGCTGACTGAGGATTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | TTCCTGCTGATCTGTAGAATCCTCAGTCAGCACCTCTaGGTACAGTGCTGGACTCTGAAGAGGCTCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLLICRILSQHL*VQCWTLKRLLG Trigger: ACCCAGGAGCCTCTTCAGAGTCCAGCACTGTACCCAGAGGTGCTGACTGAGGATTCTACAGATCAGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CCCGTGGGATCTCTACCTCGCCCTTGTGAGTCAGTTTaGAGGCCGGAAGTCTGTACAGTTCCTTCTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PVGSLPRPCESV*RPEVCTVPSVV Trigger: AACAACAGAAGGAACTGTACAGACTTCCGGCCTCCAAACTGACTCACAAGGGCGAGGTAGAGATCCCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CAA 90 bp | CTTGTGAGTCAGTTTGGAGGCCGGAAGTCTGTACAGTTCCTTCTGTaGTTGCTCAATGATGTCCAGGCCCTTTCTCTCCTCCTGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVSQFGGRKSVQFLL*LLNDVQALSLLLVP Trigger: CGGGACCAGGAGGAGAGAAAGGGCCTGGACATCATTGAGCAACAACAGAAGGAACTGTACAGACTTCCGGCCTCCAAACTGACTCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CAA 90 bp | AGGATCCTTTCCACTCTTTTGCTGAAGGACACGGTCTTTGGGACCTaGTTCGACACAGGGATGGACGTAGCTGTGTCTGGAAGCGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RILSTLLLKDTVFGT*FDTGMDVAVSGSAS Trigger: GGATGCGCTTCCAGACACAGCTACGTCCATCCCTGTGTCGAACAAGGTCCCAAAGACCGTGTCCTTCAGCAAAAGAGTGGAAAGGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | ATCCTTTTTACTGGCTCCCTCTGCGTGATCCTGGCTTaGGTCATCTGGACTTGTCCAAGGCCGCTTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILFTGSLCVILA*VIWTCPRPLLH Trigger: GTGAAGAAGCGGCCTTGGACAAGTCCAGATGACTCAAGCCAGGATCACGCAGAGGGAGCCAGTAAAAAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | TGCCCTCTGCTGATGAGGTTCCGCATTCTCAGTTTCTaGAGGATCACTCTGACAAGGGGTAGGGTGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CPLLMRFRILSF*RITLTRGRVSS Trigger: ACTGCTCACCCTACCCCTTGTCAGAGTGATCCTTCAGAAACTGAGAATGCGGAACCTCATCAGCAGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS GCA 72 bp | TTGGAGGCCGGAAGTCTGTACAGTTCCTTCTGTTGTTaGTCAATGATGTCCAGGCCCTTTCTCTCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LEAGSLYSSFCC*SMMSRPFLSSW Trigger: CCAGGAGGAGAGAAAGGGCCTGGACATCATTGAGCAACAACAGAAGGAACTGTACAGACTTCCGGCCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS CAA 72 bp | TCCACTCTTTTGCTGAAGGACACGGTCTTTGGGACCTaGTTCGACACAGGGATGGACGTAGCTGTGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: STLLLKDTVFGT*FDTGMDVAVSG Trigger: TCCAGACACAGCTACGTCCATCCCTGTGTCGAACAAGGTCCCAAAGACCGTGTCCTTCAGCAAAAGAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CCAAACCTCAGGGAAAAACCTGACTTTTCCTCCTCCTaGGGACAGATTCCACACTTCCTGCATTTCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PNLREKPDFSSS*GQIPHFLHFLR Trigger: CCGAAGGAAATGCAGGAAGTGTGGAATCTGTCCCCAGGAGGAGGAAAAGTCAGGTTTTTCCCTGAGGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | CTCGGTTTCTACAGCACATTCCACCCAACTTCCACCTaGCTCTCCAGGCTCAGTGTCCTTAGAAGAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGFYSTFHPTST*LSRLSVLRRKK Trigger: CTTCTTTCTTCTAAGGACACTGAGCCTGGAGAGCCAGGTGGAAGTTGGGTGGAATGTGCTGTAGAAACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS CCA 72 bp | GATCCTTTCCACTCTTTTGCTGAAGGACACGGTCTTTaGGACCTTGTTCGACACAGGGATGGACGTAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DPFHSFAEGHGL*DLVRHRDGRSC Trigger: ACAGCTACGTCCATCCCTGTGTCGAACAAGGTCCCAAAGACCGTGTCCTTCAGCAAAAGAGTGGAAAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | CTCATCTGTACCAGGTTGTTAGGGGTGACGTCACAGTaGGCCACTTTGAGAAACAGGTCAACATTTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LICTRLLGVTSQ*ATLRNRSTFRG Trigger: TCCCCGAAATGTTGACCTGTTTCTCAAAGTGGCTCACTGTGACGTCACCCCTAACAACCTGGTACAGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084263.6 ENSMUST00000128007.8 |
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| CDS TCA 72 bp | GGCAGTTTAGTTGAGGATTTCCGATCCGTGCAGATTTaGCAGTTAGAGTCACATTGGTGGTGCTGGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GSLVEDFRSVQI*QLESHWWCWCQ Trigger: TTGGCACCAGCACCACCAATGTGACTCTAACTGTCAAATCTGCACGGATCGGAAATCCTCAACTAAACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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| CDS TCA 72 bp | GTTCATGATGACCCCGGAGAAGGCTGGCAGTTTAGTTaGGGATTTCCGATCCGTGCAGATTTGACAGTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VHDDPGEGWQFS*GFPIRADLTVR Trigger: TCTAACTGTCAAATCTGCACGGATCGGAAATCCTCAACTAAACTGCCAGCCTTCTCCGGGGTCATCATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084263.6 |
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