Pregenerated sensors for SPNS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020798Ensembl transcript IDs: ENSMUST00000021154.7, ENSMUST00000092940.13
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGGAGTCACAGCCAAGATaGGTGGGGGCCCCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWESQPR*VGAPGG Trigger: TCCTCCTGGGGCCCCCACCCATCTTGGCTGTGACTC...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGAAAAAGTGGGGTCCCTaGGTCACAGCCAAGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWKKWGP*VTAKMG Trigger: ACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTT...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| 3UTR TCA 72 bp | CCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTaGAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: PAPAPWQLSSRD*KSGVPESQPRW Trigger: CCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGTCCTGGCTGTGGCACTaGTCCTGGAAGCAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWSWLWH*SWKQGS Trigger: GCTCCCCTGCTTCCAGGAGCAGTGCCACAGCCAGGA...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGCCTTGGCTCAGGCTCTaGCTCTGTGGCCCTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWPWLRL*LCGPPV Trigger: GACAGGAGGGCCACAGAGCCAGAGCCTGAGCCAAGG...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGGAAGCAGGGGAGCTaGAGGCCATGCACCACGCGA | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHWKQGS*RPCTTR Trigger: TCGCGTGGTGCATGGCCTGCAGCTCCCCTGCTTCCA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | AGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCTGGAAGCAGGGGAGCTaGAGGCCATGCACCACGCGA | + |
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Preference number: 4 (lower is better) Translates to: SQLLRPGSSLAGIEKVGSWKQGS*RPCTTR Trigger: TCGCGTGGTGCATGGCCTGCAGCTCCCCTGCTTCCA...GGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGTGTCCAGAGTTCCTTTaGCAGGTTGCCTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWCPEFL*QVAWPG Trigger: CCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACA...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTCCAGGGGACGGGTGTaGAGGGAGGCAGACACGTAC | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHSRGRV*READTY Trigger: GTACGTGTCTGCCTCCCTCCACACCCGTCCCCTGGA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCTGTGGCACTGCTCCTaGAAGCAGGGGAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKLWHCS*KQGSCR Trigger: CCTGCAGCTCCCCTGCTTCCAGGAGCAGTGCCACAG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGAGGCTGTCCTGGCTGTaGCACTGCTCCTGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGRLSWL*HCSWKQ Trigger: CTGCTTCCAGGAGCAGTGCCACAGCCAGGACAGCCT...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCCTGGCCCGGGCCTaGTCCTTTTCCAGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHCLARA*SFSRCS Trigger: ACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTCCGTGAGGCCAAGATaGGAGCCAGGTAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHSVRPR*EPGRGR Trigger: CCTGCCTCTACCTGGCTCTCATCTTGGCCTCACGGA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | CAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCTCCGTGAGGCCAAGATaGGAGCCAGGTAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QDGWGPQEDVGRIEPAHCSVRPR*EPGRGR Trigger: CCTGCCTCTACCTGGCTCTCATCTTGGCCTCACGGA...GCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGAGCTGTGCTGTAGGCTaGGGAAGTGCTGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWSCAVG*GSAAGR Trigger: CCTACCTGCAGCACTTCCTCAGCCTACAGCACAGCT...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGTCCCTGTTTCTCAGCTaGTCCTCGGGGTACGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWSLFLS*SSGYVW Trigger: CCAGACGTACCCCGAGGAGCAGCTGAGAAACAGGGA...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACCATCCTCACACCAGCTaGTCCTCGGAGCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHHPHTS*SSEPSQ Trigger: CTGTGAGGGCTCCGAGGAGCAGCTGGTGTGAGGATG...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCATCCTCACACCAGCTaGTCCTCGGAGCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKHPHTS*SSEPSQ Trigger: CTGTGAGGGCTCCGAGGAGCAGCTGGTGTGAGGATG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCTCCTGGCTGTGGCACTaGTCCTGGAAGCAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSSWLWH*SWKQGS Trigger: GCTCCCCTGCTTCCAGGAGCAGTGCCACAGCCAGGA...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCTTTGCCAGGTTGCCTaGCCCGGGCCTGGTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKLCQVA*PGPGPF Trigger: AAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGTGTGGCCCTCCTGTCTaGGGTTTGAGACACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGCGPPV*GLRHSV Trigger: CACAGAGTGTCTCAAACCTCAGACAGGAGGGCCACA...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACAGCTGTGCTGTAGGCTaGGGAAGTGCTGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHSCAVG*GSAAGR Trigger: CCTACCTGCAGCACTTCCTCAGCCTACAGCACAGCT...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACCAGGCTCTGGCTCTGTaGCCCTCCTGTCTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHQALAL*PSCLRF Trigger: AAACCTCAGACAGGAGGGCCACAGAGCCAGAGCCTG...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGCCTTGGCTCAGGCTCTaGCTCTGTGGCCCTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVPWLRL*LCGPPV Trigger: GACAGGAGGGCCACAGAGCCAGAGCCTGAGCCAAGG...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGAGTGCACAGGTCCGCTaGTCCTTCACGAAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGSAQVR*SFTKRS Trigger: AGACCTCTTCGTGAAGGACCAGCGGACCTGTGCACT...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCAGGCTGTCCTGGCTGTaGCACTGCTCCTGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSRLSWL*HCSWKQ Trigger: CTGCTTCCAGGAGCAGTGCCACAGCCAGGACAGCCT...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGAAAATCAGGCTGTCCTaGCTGTGGCACTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGKIRLS*LWHCSW Trigger: CCAGGAGCAGTGCCACAGCCAGGACAGCCTGATTTT...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAATGCCTGGCCCGGGCCTaGTCCTTTTCCAGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKCLARA*SFSRCS Trigger: ACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCA...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGAATACTGGTAGGAGATaGAGGAGCTGGAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWNTGRR*RSWRGQ Trigger: CTGGCCTCTCCAGCTCCTTCATCTCCTACCAGTATT...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGGTAAAAGACAGCCAGTaGACAGGTCCGCTGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWVKDSQ*TGPLVL Trigger: AAGGACCAGCGGACCTGTGCACTGGCTGTCTTTTAC...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGAGTTGCCACGGTCAGTaGCCCAAAAATCAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWSCHGQ*PKNQAV Trigger: GACAGCCTGATTTTTGGGGCACTGACCGTGGCAACT...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAATGTCCAGAGTTCCTTTaGCAGGTTGCCTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKCPEFL*QVAWPG Trigger: CCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACA...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAACTTTGCCAGGTTGCCTaGCCCGGGCCTGGTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKLCQVA*PGPGPF Trigger: AAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAG...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAAGGCAGACACGTACCTaGAGCCAAGGCCCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKRQTRT*SQGPIL Trigger: CAGTATGGGGCCTTGGCTTCAGGTACGTGTCTGCCT...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTTCTCCCCAAGTATCTaGCATCCTCACACCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHFSPSI*HPHTSC Trigger: GCAGCTGGTGTGAGGATGTCAGATACTTGGGGAGAA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | AGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCAAACAGAAACTTGGGTaGCCAGAAGCCCAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SQLLRPGSSLAGIEKVGSKQKLG*PEAQST Trigger: GGTGCTCTGGGCTTCTGGGCACCCAAGTTTCTGTTT...GGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGGTCCTTTTCCAGGTaGAGTGCAGTCAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHWSFSR*SAVSRK Trigger: CTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCA...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | CAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCGGACAGTGGGTGCAATaGTGGAATAGCTTGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: QDGWGPQEDVGRIEPAHCGQWVQ*WNSLLH Trigger: GTGCAGCAAGCTATTCCACCATTGCACCCACTGTCC...GCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGGACAGTGGGTGCAATaGTGGAATAGCTTGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKGQWVQ*WNSLLH Trigger: GTGCAGCAAGCTATTCCACCATTGCACCCACTGTCC...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCAGTGCACAGGTCCGCTaGTCCTTCACGAAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSSAQVR*SFTKRS Trigger: AGACCTCTTCGTGAAGGACCAGCGGACCTGTGCACT...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGCTTCAAACAGAAACTTaGGTGCCCAGAAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWLQTET*VPRSPE Trigger: CTCTGGGCTTCTGGGCACCCAAGTTTCTGTTTGAAG...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CCA 90 bp | TCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGGGTGGCTGTGGCACTGCTCCTaGAAGCAGGGGAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLAGIEKVGSLSHSQDGWLWHCS*KQGSCR Trigger: CCTGCAGCTCCCCTGCTTCCAGGAGCAGTGCCACAG...CCACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR TCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCAATACTGGTAGGAGATaGAGGAGCTGGAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSNTGRR*RSWRGQ Trigger: CTGGCCTCTCCAGCTCCTTCATCTCCTACCAGTATT...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR GCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCGTAAAAGACAGCCAGTaGACAGGTCCGCTGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSVKDSQ*TGPLVL Trigger: AAGGACCAGCGGACCTGTGCACTGGCTGTCTTTTAC...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCTGATGAAGACTGTCTaGAGCAAACCAGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKLMKTV*SKPAWL Trigger: CAGCCATGCTGGTTTGCTGCAGACAGTCTTCATCAG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092940.13 |
||
| CDS-3UTR CCA 90 bp | CAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCCAGTCACAAAGGCTATaGCTGTCACTCCAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDGWGPQEDVGRIEPAHCQSQRL*LSLQGL Trigger: CAACCCTTGGAGTGACAGCCATAGCCTTTGTGACTG...GCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAAAAATCAGGCTGTCCTaGCTGTGGCACTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKKIRLS*LWHCSW Trigger: CCAGGAGCAGTGCCACAGCCAGGACAGCCTGATTTT...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 57% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGTCTCCCTGGAGGGTGTAGACACAGGGCCCAGACTCCCTAAAGGATGGCACTTCCAACAGGGATaGAGATGTAAAAGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVSLEGVDTGPRLPKGWHFQQG*RCKRQP Trigger: TGGCTGTCTTTTACATCTTCATCCCTGTTGGAAGTG...CCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAATCCCAGGACAGTGGGTaGAATGGTGGAATAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKSQDSG*NGGIAC Trigger: GCAAGCTATTCCACCATTGCACCCACTGTCCTGGGA...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGTCCCAGGACAGTGGGTaGAATGGTGGAATAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVSQDSG*NGGIAC Trigger: GCAAGCTATTCCACCATTGCACCCACTGTCCTGGGA...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGAAACAGAAACTTGGGTaGCCAGAAGCCCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVKQKLG*PEAQST Trigger: GGTGCTCTGGGCTTCTGGGCACCCAAGTTTCTGTTT...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGAGTTGCCACGGTCAGTaGCCCAAAAATCAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVSCHGQ*PKNQAV Trigger: GACAGCCTGATTTTTGGGGCACTGACCGTGGCAACT...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGACCAATAATACCAGTTaGCACGGTCAGTGCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKTNNTS*HGQCPK Trigger: TTTGGGGCACTGACCGTGGCAACTGGTATTATTGGT...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAATGGTCCTTTTCCAGGTaGAGTGCAGTCAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKWSFSR*SAVSRK Trigger: CTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCA...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGGGTGGCAGGCTCTGGCTCTGTaGCCCTCCTGTCTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLAGIEKVGSLSHSQDGWQALAL*PSCLRF Trigger: AAACCTCAGACAGGAGGGCCACAGAGCCAGAGCCTG...CCACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGGGTGGTGTGGCCCTCCTGTCTaGGGTTTGAGACACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLAGIEKVGSLSHSQDGWCGPPV*GLRHSV Trigger: CACAGAGTGTCTCAAACCTCAGACAGGAGGGCCACA...CCACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CCA 90 bp | CAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCGCAGCTGATGAAGACTaGGATGATGAACCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDGWGPQEDVGRIEPAHCAADED*DDEPVH Trigger: ATGAACTGGTTCATCATCCCAGTCTTCATCAGCTGC...GCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021154.7 |
||
| CDS-3UTR CCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAACAGTCACAAAGGCTATaGCTGTCACTCCAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKQSQRL*LSLQGL Trigger: CAACCCTTGGAGTGACAGCCATAGCCTTTGTGACTG...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCACTTCCAACAGGGATaGAGATGTAAAAGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSHFQQG*RCKRQP Trigger: TGGCTGTCTTTTACATCTTCATCCCTGTTGGAAGTG...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCTGTCACTCCAAGGGTTaGAAACACAAAACTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLRPGSSLAGIEKVGSCHSKG*KHKTPV Trigger: AACTGGAGTTTTGTGTTTTCAACCCTTGGAGTGACA...GGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR GCA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGACCAATAATACCAGTTaGCACGGTCAGTGCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVTNNTS*HGQCPK Trigger: TTTGGGGCACTGACCGTGGCAACTGGTATTATTGGT...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | CAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCTGTAATTCAGAAGGTTaGTGTAACAGAGAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDGWGPQEDVGRIEPAHCCNSEG*CNREQL Trigger: CAGCTGTTCTCTGTTACATCAACCTTCTGAATTACA...GCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGGGTGGCTTCAAACAGAAACTTaGGTGCCCAGAAGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLAGIEKVGSLSHSQDGWLQTET*VPRSPE Trigger: CTCTGGGCTTCTGGGCACCCAAGTTTCTGTTTGAAG...CCACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR TCA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAATGTAATTCAGAAGGTTaGTGTAACAGAGAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKCNSEG*CNREQL Trigger: CAGCTGTTCTCTGTTACATCAACCTTCTGAATTACA...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS TCA 90 bp | GGGCAGGCTCCAGGGGACGGGTGTGGAGGGAGGCAGACACGTACCTaGAGCCAAGGCCCCATACTGCCCACCTTGGCTCAGGCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQAPGDGCGGRQTRT*SQGPILPTLAQALA Trigger: AGCCAGAGCCTGAGCCAAGGTGGGCAGTATGGGGCCTTGGCTTCAGGTACGTGTCTGCCTCCCTCCACACCCGTCCCCTGGAGCCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS TCA 90 bp | GAGCTCCCCGAGGGCCAGGAACACATAGGAGGCCAGGAGGGTCCGTaGGGCCAAGATGAGAGCCAGGTAGAGGCAGGGAGCTGTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELPEGQEHIGGQEGP*GQDESQVEAGSCGK Trigger: TTTGCCACAGCTCCCTGCCTCTACCTGGCTCTCATCTTGGCCTCACGGACCCTCCTGGCCTCCTATGTGTTCCTGGCCCTCGGGGAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCCCATACTGCCCACCTaGGCTCAGGCTCTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKPILPT*AQALAL Trigger: CAGAGCCAGAGCCTGAGCCAAGGTGGGCAGTATGGG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | GTTCCTTTGCCAGGTTGCCTGGCCCGGGCCTGGTCCTTTTCCAGGTaGAGTGCAGTCAGCAGGAAGAAGCCACCACCTAGCACTATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPLPGCLARAWSFSR*SAVSRKKPPPSTMA Trigger: CGCCATAGTGCTAGGTGGTGGCTTCTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCTGTCCAGAGTTCCTTaGCCAGGTTGCCTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSLSRVP*PGCLAR Trigger: CCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAG...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | GCTGCTCCTCGGAGCCCTCACAGCCACTTCTCCCTGTTTCTCAGCTaGTCCTCGGGGTACGTCTGGAACCAGCAAGATGAGCAGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AAPRSPHSHFSLFLS*SSGYVWNQQDEQSQ Trigger: TTGGCTCTGCTCATCTTGCTGGTTCCAGACGTACCCCGAGGAGCAGCTGAGAAACAGGGAGAAGTGGCTGTGAGGGCTCCGAGGAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS CCA 90 bp | TCCGCTGGTCCTTCACGAAGAGGTCTCCCAGGACAGTGGGTGCAATaGTGGAATAGCTTGCTGCACCGGTACCCACGAATCCCCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAGPSRRGLPGQWVQ*WNSLLHRYPRIPGT Trigger: TGTCCCGGGGATTCGTGGGTACCGGTGCAGCAAGCTATTCCACCATTGCACCCACTGTCCTGGGAGACCTCTTCGTGAAGGACCAGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS CCA 90 bp | TCCTTGCTGTCCAGAGTTCCTTTGCCAGGTTGCCTGGCCCGGGCCTaGTCCTTTTCCAGGTGCAGTGCAGTCAGCAGGAAGAAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSRVPLPGCLARA*SFSRCSAVSRKKPP Trigger: TGGTGGCTTCTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAGCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS CCA 90 bp | TGCTGGCTATGTCCTTGCTGTCCAGAGTTCCTTTGCCAGGTTGCCTaGCCCGGGCCTGGTCCTTTTCCAGGTGCAGTGCAGTCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CWLCPCCPEFLCQVA*PGPGPFPGAVQSAG Trigger: TCCTGCTGACTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAGCAAGGACATAGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGCCCATACTGCCCACCTaGGCTCAGGCTCTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVPILPT*AQALAL Trigger: CAGAGCCAGAGCCTGAGCCAAGGTGGGCAGTATGGG...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | GATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGCCTTCTTGTACCTTCTaGAGGCCTCTGCCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGWGPQEDVGRIEPAHCKPSCTF*RPLPPA Trigger: TGCTGGGGGCAGAGGCCTCAAGAAGGTACAAGAAGG...CTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | CAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGCTGTCCAGAGTTCCTTaGCCAGGTTGCCTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSQLLRPGSSLAGIEKVLSRVP*PGCLAR Trigger: CCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAG...CACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS TCA 90 bp | GAGTCGGAGGGCCCATCGCCAGTTCCCTGTCAGCTCCGCCACAGTTaGTCCCAGCACATAGCCCAGACCACTTCCAACAGGGATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESEGPSPVPCQLRHS*SQHIAQTTSNRDED Trigger: ATCTTCATCCCTGTTGGAAGTGGTCTGGGCTATGTGCTGGGATCAACTGTGGCGGAGCTGACAGGGAACTGGCGATGGGCCCTCCGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | TTGGGGTGCTGGTGCCAGATAGCAGCCCTTGGCTCTCGGTGTTCCTaGTGGCTATGTCCTTGCTGTCCAGAGTTCCTTTGCCAGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGCWCQIAALGSRCS*WLCPCCPEFLCQVA Trigger: GGCAACCTGGCAAAGGAACTCTGGACAGCAAGGACATAGCCAGCAGGAACACCGAGAGCCAAGGGCTGCTATCTGGCACCAGCACCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGGCTTCAAACAGAAACTaGGGTGCCCAGAAGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGASNRN*GAQKPR Trigger: TCTGGGCTTCTGGGCACCCAAGTTTCTGTTTGAAGC...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACTGCAAGGCAGGGCTGGGGTTCACCTTCTaGTACCTTCTTGAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WGPQEDVGRIEPAHCKAGLGFTF*YLLEAS Trigger: AGAGGCCTCAAGAAGGTACAAGAAGGTGAACCCCAG...CCCTGCCTTGCAGTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | GAGCTGCAGGCCATGCACCACGCGAGCTTCAAACAGAAACTTGGGTaGCCAGAAGCCCAGAGCACCAGTCACAAAGGCTATGGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELQAMHHASFKQKLG*PEAQSTSHKGYGCH Trigger: GTGACAGCCATAGCCTTTGTGACTGGTGCTCTGGGCTTCTGGGCACCCAAGTTTCTGTTTGAAGCTCGCGTGGTGCATGGCCTGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS CCA 90 bp | CACAGCCACTTCTCCCTGTTTCTCAGCTGCTCCTCGGGGTACGTCTaGAACCAGCAAGATGAGCAGAGCCAAGGCCATGGCATCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSHFSLFLSCSSGYV*NQQDEQSQGHGIQA Trigger: TGCTTGGATGCCATGGCCTTGGCTCTGCTCATCTTGCTGGTTCCAGACGTACCCCGAGGAGCAGCTGAGAAACAGGGAGAAGTGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | GCTCAATCCAGCCAGCTCCTGCGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAACCTTCTTGTACCTTCTaGAGGCCTCTGCCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQSSQLLRPGSSLAGIEKPSCTF*RPLPPA Trigger: TGCTGGGGGCAGAGGCCTCAAGAAGGTACAAGAAGG...TTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCGCAGGAGCTGGCTGGATTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | CTCTGCCCCCAGCATGACACCAATAATACCAGTTGCCACGGTCAGTaGCCCAAAAATCAGGCTGTCCTGGCTGTGGCACTGCTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCPQHDTNNTSCHGQ*PKNQAVLAVALLLE Trigger: TTCCAGGAGCAGTGCCACAGCCAGGACAGCCTGATTTTTGGGGCACTGACCGTGGCAACTGGTATTATTGGTGTCATGCTGGGGGCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS GCA 90 bp | GCCCAGACCACTTCCAACAGGGATGAAGATGTAAAAGACAGCCAGTaGACAGGTCCGCTGGTCCTTCACGAAGAGGTCTCCCAGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQTTSNRDEDVKDSQ*TGPLVLHEEVSQDS Trigger: ACTGTCCTGGGAGACCTCTTCGTGAAGGACCAGCGGACCTGTGCACTGGCTGTCTTTTACATCTTCATCCCTGTTGGAAGTGGTCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
||
| CDS-3UTR CAA 90 bp | AGCCAAGATGGGTGGGGGCCCCAGGAGGATGTAGGTAGGATTGAGCCTGCTCACCTGTCACTCCAAGGGTaGAAAACACAAAACTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQDGWGPQEDVGRIEPAHLSLQG*KTQNSS Trigger: ACTGGAGTTTTGTGTTTTCAACCCTTGGAGTGACAG...GTGAGCAGGCTCAATCCTACCTACATCCTCCTGGGGCCCCCACCCATCTTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CAA 90 bp | CGCCCTGGCAGCTCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCTGTCACTCCAAGGGTaGAAAACACAAAACTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: RPGSSLAGIEKVGSLSHSLSLQG*KTQNSS Trigger: ACTGGAGTTTTGTGTTTTCAACCCTTGGAGTGACAG...GCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGAGCTGCCAGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS-3UTR CAA 90 bp | TCTCTAGCAGGGATTGAAAAAGTGGGGTCCCTGAGTCACAGCCAAGATGGGTGGCTGGGGTTCACCTTCTaGTACCTTCTTGAGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLAGIEKVGSLSHSQDGWLGFTF*YLLEAS Trigger: AGAGGCCTCAAGAAGGTACAAGAAGGTGAACCCCAG...CCACCCATCTTGGCTGTGACTCAGGGACCCCACTTTTTCAATCCCTGCTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS TCA 90 bp | CTGATGAAGACTGTCTGCAGCAAACCAGCATGGCTGTCACTGATGTaGAAATACTTCTGGACATCTAGTAACACTCCTGGGATGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: LMKTVCSKPAWLSLM*KYFWTSSNTPGMMN Trigger: GTTCATCATCCCAGGAGTGTTACTAGATGTCCAGAAGTATTTTCACATCAGTGACAGCCATGCTGGTTTGCTGCAGACAGTCTTCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092940.13 |
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| CDS TCA 72 bp | AGGGGCTGCCAGCATCTCCCAGGACGTGAGCCACTGTaGTCTGGAGTGCCTCTGCCGTGCCCCGGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: RGCQHLPGREPL*SGVPLPCPGTW Trigger: CCAGGTGCCGGGGCACGGCAGAGGCACTCCAGATCACAGTGGCTCACGTCCTGGGAGATGCTGGCAGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | AGCATCTCCCAGGACGTGAGCCACTGTGATCTGGAGTaGCTCTGCCGTGCCCCGGCACCTGGGCACCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SISQDVSHCDLE*LCRAPAPGHHH Trigger: GTGGTGGTGCCCAGGTGCCGGGGCACGGCAGAGGCACTCCAGATCACAGTGGCTCACGTCCTGGGAGATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS TCA 72 bp | CCAGGGGACGGGTGTGGAGGGAGGCAGACACGTACCTaGAGCCAAGGCCCCATACTGCCCACCTTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PGDGCGGRQTRT*SQGPILPTLAQ Trigger: CTGAGCCAAGGTGGGCAGTATGGGGCCTTGGCTTCAGGTACGTGTCTGCCTCCCTCCACACCCGTCCCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS TCA 72 bp | GAGGGCCAGGAACACATAGGAGGCCAGGAGGGTCCGTaGGGCCAAGATGAGAGCCAGGTAGAGGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: EGQEHIGGQEGP*GQDESQVEAGS Trigger: GCTCCCTGCCTCTACCTGGCTCTCATCTTGGCCTCACGGACCCTCCTGGCCTCCTATGTGTTCCTGGCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | GGAGGCAGACACGTACCTGAAGCCAAGGCCCCATACTaGCCACCTTGGCTCAGGCTCTGGCTCTGTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GGRHVPEAKAPY*PPWLRLWLCGP Trigger: AGGGCCACAGAGCCAGAGCCTGAGCCAAGGTGGGCAGTATGGGGCCTTGGCTTCAGGTACGTGTCTGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | CCAGGTTGCCTGGCCCGGGCCTGGTCCTTTTCCAGGTaGAGTGCAGTCAGCAGGAAGAAGCCACCACCTAGC | + |
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Preference number: 6 (lower is better) Translates to: PGCLARAWSFSR*SAVSRKKPPPS Trigger: GCTAGGTGGTGGCTTCTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | CCAAAAATCAGGCTGTCCTGGCTGTGGCACTGCTCCTaGAAGCAGGGGAGCTGCAGGCCATGCACCACGCGA | + |
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Preference number: 6 (lower is better) Translates to: PKIRLSWLWHCS*KQGSCRPCTTR Trigger: TCGCGTGGTGCATGGCCTGCAGCTCCCCTGCTTCCAGGAGCAGTGCCACAGCCAGGACAGCCTGATTTTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | TGGCACTGCTCCTGGAAGCAGGGGAGCTGCAGGCCATaGACCACGCGAGCTTCAAACAGAAACTTGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: WHCSWKQGSCRP*TTRASNRNLGA Trigger: GGCACCCAAGTTTCTGTTTGAAGCTCGCGTGGTGCATGGCCTGCAGCTCCCCTGCTTCCAGGAGCAGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | TCCAGAGTTCCTTTGCCAGGTTGCCTGGCCCGGGCCTaGTCCTTTTCCAGGTGCAGTGCAGTCAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRVPLPGCLARA*SFSRCSAVSRK Trigger: CTTCCTGCTGACTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | TGTCCTTGCTGTCCAGAGTTCCTTTGCCAGGTTGCCTaGCCCGGGCCTGGTCCTTTTCCAGGTGCAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CPCCPEFLCQVA*PGPGPFPGAVQ Trigger: CTGCACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAGCAAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CAA 72 bp | GGGCCCATCGCCAGTTCCCTGTCAGCTCCGCCACAGTaGATCCCAGCACATAGCCCAGACCACTTCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: GPIASSLSAPPQ*IPAHSPDHFQQ Trigger: CTGTTGGAAGTGGTCTGGGCTATGTGCTGGGATCAACTGTGGCGGAGCTGACAGGGAACTGGCGATGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CAA 72 bp | GGCTATGTCCTTGCTGTCCAGAGTTCCTTTGCCAGGTaGCCTGGCCCGGGCCTGGTCCTTTTCCAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GYVLAVQSSFAR*PGPGLVLFQVQ Trigger: CTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAGCAAGGACATAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS TCA 72 bp | ACACATAGGAGGCCAGGAGGGTCCGTGAGGCCAAGATaGGAGCCAGGTAGAGGCAGGGAGCTGTGGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: THRRPGGSVRPR*EPGRGRELWQT Trigger: TGTTTGCCACAGCTCCCTGCCTCTACCTGGCTCTCATCTTGGCCTCACGGACCCTCCTGGCCTCCTATGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | CGGAGCCCTCACAGCCACTTCTCCCTGTTTCTCAGCTaGTCCTCGGGGTACGTCTGGAACCAGCAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: RSPHSHFSLFLS*SSGYVWNQQDE Trigger: CTCATCTTGCTGGTTCCAGACGTACCCCGAGGAGCAGCTGAGAAACAGGGAGAAGTGGCTGTGAGGGCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | GCTATGTCCTTGCTGTCCAGAGTTCCTTTGCCAGGTTaGCTGGCCCGGGCCTGGTCCTTTTCCAGGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AMSLLSRVPLPG*LARAWSFSRCS Trigger: ACTGCACCTGGAAAAGGACCAGGCCCGGGCCAGGCAACCTGGCAAAGGAACTCTGGACAGCAAGGACATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | CCCATACTGCCCACCTTGGCTCAGGCTCTGGCTCTGTaGCCCTCCTGTCTGAGGTTTGAGACACTCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PILPTLAQALAL*PSCLRFETLCG Trigger: TCCACAGAGTGTCTCAAACCTCAGACAGGAGGGCCACAGAGCCAGAGCCTGAGCCAAGGTGGGCAGTATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | CTGGTCCTTCACGAAGAGGTCTCCCAGGACAGTGGGTaGAATGGTGGAATAGCTTGCTGCACCGGTACCCAC | + |
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Preference number: 6 (lower is better) Translates to: LVLHEEVSQDSG*NGGIACCTGTH Trigger: GTGGGTACCGGTGCAGCAAGCTATTCCACCATTGCACCCACTGTCCTGGGAGACCTCTTCGTGAAGGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | TCACGAAGAGGTCTCCCAGGACAGTGGGTGCAATGGTaGAATAGCTTGCTGCACCGGTACCCACGAATCCCC | + |
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Preference number: 6 (lower is better) Translates to: SRRGLPGQWVQW*NSLLHRYPRIP Trigger: GGGGATTCGTGGGTACCGGTGCAGCAAGCTATTCCACCATTGCACCCACTGTCCTGGGAGACCTCTTCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | TGGTGCCAGATAGCAGCCCTTGGCTCTCGGTGTTCCTaGTGGCTATGTCCTTGCTGTCCAGAGTTCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: WCQIAALGSRCS*WLCPCCPEFLC Trigger: GCAAAGGAACTCTGGACAGCAAGGACATAGCCAGCAGGAACACCGAGAGCCAAGGGCTGCTATCTGGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | CCTTCACGAAGAGGTCTCCCAGGACAGTGGGTGCAATaGTGGAATAGCTTGCTGCACCGGTACCCACGAATC | + |
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Preference number: 6 (lower is better) Translates to: PSRRGLPGQWVQ*WNSLLHRYPRI Trigger: GATTCGTGGGTACCGGTGCAGCAAGCTATTCCACCATTGCACCCACTGTCCTGGGAGACCTCTTCGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS CCA 72 bp | TGCCAGATAGCAGCCCTTGGCTCTCGGTGTTCCTGCTaGCTATGTCCTTGCTGTCCAGAGTTCCTTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CQIAALGSRCSC*LCPCCPEFLCQ Trigger: CTGGCAAAGGAACTCTGGACAGCAAGGACATAGCCAGCAGGAACACCGAGAGCCAAGGGCTGCTATCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | CAGCATGACACCAATAATACCAGTTGCCACGGTCAGTaGCCCAAAAATCAGGCTGTCCTGGCTGTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: QHDTNNTSCHGQ*PKNQAVLAVAL Trigger: CAGTGCCACAGCCAGGACAGCCTGATTTTTGGGGCACTGACCGTGGCAACTGGTATTATTGGTGTCATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS GCA 72 bp | ACTTCCAACAGGGATGAAGATGTAAAAGACAGCCAGTaGACAGGTCCGCTGGTCCTTCACGAAGAGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSNRDEDVKDSQ*TGPLVLHEEVS Trigger: GGAGACCTCTTCGTGAAGGACCAGCGGACCTGTGCACTGGCTGTCTTTTACATCTTCATCCCTGTTGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021154.7 ENSMUST00000092940.13 |
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| CDS TCA 72 bp | ACTGTCTGCAGCAAACCAGCATGGCTGTCACTGATGTaGAAATACTTCTGGACATCTAGTAACACTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TVCSKPAWLSLM*KYFWTSSNTPG Trigger: CCCAGGAGTGTTACTAGATGTCCAGAAGTATTTTCACATCAGTGACAGCCATGCTGGTTTGCTGCAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092940.13 |
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