Pregenerated sensors for SPNS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040447Ensembl transcript IDs: ENSMUST00000045303.10, ENSMUST00000144940.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGTCCTGGCGGTCCCAGGCCAAAGAGGGTGGGTACCCAACTGTaGGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATG | + |
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Preference number: 1 (lower is better) Translates to: LSPGGPRPKRVGTQL*VTQEALGPSCRSRM Trigger: CATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCACCCTCTTTGGCCTGGGACCGCCAGGACTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 90 bp | TGGCCCTCCAGTCCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTaGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: WPSSPQPGLELCPTE*FQHTQPSRLTEDAA Trigger: AGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGGACTGGAGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 90 bp | AGGCCAGAATCTCCCCAAATCCCTGCTGCACGGTGGCTTCTATCTTaGCCCTCCAGTCCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAG | + |
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Preference number: 1 (lower is better) Translates to: RPESPQIPAARWLLS*PSSPQPGLELCPTE Trigger: CTCAGTTGGACACAACTCCAGCCCTGGCTGGGGACTGGAGGGCCAAGATAGAAGCCACCGTGCAGCAGGGATTTGGGGAGATTCTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 90 bp | GAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTaGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGCTGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: ELHRKLWDRPAGPGC*RTSPNLNCSSLLSQ Trigger: CTGGGACAGCAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR GCA 90 bp | TGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATaGTGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CELHRKLWDRPAGPG*WRTSPNLNCSSLLS Trigger: GGACAGCAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 90 bp | GGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCTaGTTCTTGTACAACAAGAAAACATTGCTAGGGCCCCTGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GAVQLPEGRGGNTWT*FLYNKKTLLGPLLG Trigger: CCCCAGCAGGGGCCCTAGCAATGTTTTCTTGTTGTACAAGAACCAGGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 90 bp | GCCATGTCTTCTGTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTaGAGTGTGCCTTGCATGGCACACAATGGAGGAAGCTCCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: AMSSVYSPGPVSSKL*SVPCMAHNGGSSSS Trigger: GGAGCTGGAGCTTCCTCCATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACACAGAAGACATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 90 bp | CCACAGCAAGTGGGATACAGCCACAGGGACTGTTGTTACCCAAGCTaGTTCTGGAAGTTTCCTGCAAGTTGTAATGGTACCCCAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: PQQVGYSHRDCCYPS*FWKFPASCNGTPGP Trigger: TGGTCCTGGGGTACCATTACAACTTGCAGGAAACTTCCAGAACCAGCTTGGGTAACAACAGTCCCTGTGGCTGTATCCCACTTGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR GCA 90 bp | CTTCTGTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTaGCTTGCATGGCACACAATGGAGGAAGCTCCAGCTCCTTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLCIAQDLFLQSCGV*LAWHTMEEAPAPCF Trigger: GAAACAAGGAGCTGGAGCTTCCTCCATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACACAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 90 bp | AATAAAGGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTaGACCTGGTTCTTGTACAACAAGAAAACATTGCTAGGGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: NKGAVQLPEGRGGNT*TWFLYNKKTLLGPL Trigger: CAGGGGCCCTAGCAATGTTTTCTTGTTGTACAAGAACCAGGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCCTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGGATAGCACCCTCTGCAAACCCACGCCCAAACCCCCAGGGTGCCCCAGAGTCCCCAGCCAGGGCTaGAGTTGTGTCCAACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FRDSTLCKPTPKPPGCPRVPSQG*SCVQLS Trigger: ACTCAGTTGGACACAACTCCAGCCCTGGCTGGGGAC...TCTGGGGCACCCTGGGGGTTTGGGCGTGGGTTTGCAGAGGGTGCTATCCCTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTTCTGCCGGTCCAGGATGCTaGAGAACCTCTCCCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: EWFQHTQPSRLTEDAASSAGPGC*RTSPNL Trigger: TAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGC...AGAAGAAGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGCACACAATCCTGCCGGTCCAGGATaGTGGAGAACCTCTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SPGPVSSKLWSVPCMAHNPAGPG*WRTSPN Trigger: GTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGG...ATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR GCA 90 bp | CCCATACACCAGAGCCTTTGGCAGACCTCAGAACTGGAACTGAGGTCCCGAGACCAAAGCTGTGGAGTGTaGCTTGCATGGCACACAATG | + |
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Preference number: 2 (lower is better) Translates to: PIHQSLWQTSELELRSRDQSCGV*LAWHTM Trigger: CATTGTGTGCCATGCAAGGCACACTCCACAGCTTTG...GTCTCGGGACCTCAGTTCCAGTTCTGAGGTCTGCCAAAGGCTCTGGTGTATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGGAGACTGTCCCAGCCAGAAACACCCAAAAGTGGATACCCAGCTACATGCCGGTCCAGGATGCTaGAGAACCTCTCCCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: ILGDCPSQKHPKVDTQLHAGPGC*RTSPNL Trigger: TAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGC...ATGTAGCTGGGTATCCACTTTTGGGTGTTTCTGGCTGGGACAGTCTCCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTTCTGTGGGTACCCAACTGTaGGTTACACAGGAAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: EWFQHTQPSRLTEDAASSVGTQL*VTQEAL Trigger: CAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCAC...AGAAGAAGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAAAGGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCGGGGGTGCTCCCACCTaGGAAAACCTCCAGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KNKGAVQLPEGRGGNTWTGGAPT*ENLQAK Trigger: CTTTGCCTGGAGGTTTTCTCAGGTGGGAGCACCCCC...GGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCCTTTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGCGTGCAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAGGTGACTAAGCTGCATCCTGTAGGATaGGGTGGCTTCTGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: VTACKECKAGDKCPKVTKLHPVG*GGFWGT Trigger: AGTACCCCAGAAGCCACCTCATCCTACAGGATGCAG...CTTAGTCACCTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGGGACTGTTGTTACCCAAGCTGGTTCTGGAAGTTTCCTGCAAGTTGTGTGGGTACCCAACTGTaGGTTACACAGGAAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SHRDCCYPSWFWKFPASCVGTQL*VTQEAL Trigger: CAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCAC...ACAACTTGCAGGAAACTTCCAGAACCAGCTTGGGTAACAACAGTCCCTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CAA 90 bp | GTAAGTCCTTTAGCATCTTATCTGACTCCTCATTGGAAAGGACTCTaGGGTCATCCTGCATCCTGTAGGATGAGGTGGCTTCTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: VSPLASYLTPHWKGL*GHPASCRMRWLLGY Trigger: GTACCCCAGAAGCCACCTCATCCTACAGGATGCAGGATGACCCAAGAGTCCTTTCCAATGAGGAGTCAGATAAGATGCTAAAGGACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGCGTGCAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAGGTGACTAAGATTGGAAAGGACTCTTaGGTCATCCTGCATCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VTACKECKAGDKCPKVTKIGKDS*VILHPV Trigger: TACAGGATGCAGGATGACCCAAGAGTCCTTTCCAAT...CTTAGTCACCTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | GGCAGGCCAGAATCTCCCCAAATCCCTGCTGCACGGTaGCTTCTATCTTGGCCCTCCAGTCCCCAGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GRPESPQIPAAR*LLSWPSSPQPG Trigger: CCCTGGCTGGGGACTGGAGGGCCAAGATAGAAGCCACCGTGCAGCAGGGATTTGGGGAGATTCTGGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR TCA 72 bp | GGCGGTCCCAGGCCAAAGAGGGTGGGTACCCAACTGTaGGTTACACAGGAAGCTTTGGGACCGTCCTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: GGPRPKRVGTQL*VTQEALGPSCR Trigger: CCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCACCCTCTTTGGCCTGGGACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 72 bp | TCTCCCCAAATCCCTGCTGCACGGTGGCTTCTATCTTaGCCCTCCAGTCCCCAGCCAGGGCTGGAGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SPQIPAARWLLS*PSSPQPGLELC Trigger: ACACAACTCCAGCCCTGGCTGGGGACTGGAGGGCCAAGATAGAAGCCACCGTGCAGCAGGGATTTGGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR TCA 72 bp | CTCCAGTCCCCAGCCAGGGCTGGAGTTGTGTCCAACTaGGTGGTTCCAGCACACACAGCCTTCCAGGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LQSPARAGVVSN*VVPAHTAFQAN Trigger: GTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGGACTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 72 bp | GGGTGGGTACCCAACTGTGAGTTACACAGGAAGCTTTaGGACCGTCCTGCCGGTCCAGGATGCTGGAGAACC | + |
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Preference number: 3 (lower is better) Translates to: GWVPNCELHRKL*DRPAGPGCWRT Trigger: GGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CCA 72 bp | GGCCACTCAGTCCTGGCGGTCCCAGGCCAAAGAGGGTaGGTACCCAACTGTGAGTTACACAGGAAGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GHSVLAVPGQRG*VPNCELHRKLW Trigger: CCAAAGCTTCCTGTGTAACTCACAGTTGGGTACCCACCCTCTTTGGCCTGGGACCGCCAGGACTGAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGGATAGCACCCTCTGCAAACCCACGCCCAAACCCCCAGGGTGCCCCAGACATTGGAAAGGACTCTaGGGTCATCCTGCATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: FRDSTLCKPTPKPPGCPRHWKGL*GHPASC Trigger: ACAGGATGCAGGATGACCCAAGAGTCCTTTCCAATG...TCTGGGGCACCCTGGGGGTTTGGGCGTGGGTTTGCAGAGGGTGCTATCCCTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR GCA 72 bp | TGGTACCCCAGGACCAGAGCCACCTTGGTTACAGCGTaGAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: WYPRTRATLVTA*KECKAGDKCPK Trigger: CTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAACCAAGGTGGCTCTGGTCCTGGGGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | AGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTaGAGAACCTCTCCCAACCTAAACTGCAGTTCATTG | + |
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Preference number: 3 (lower is better) Translates to: RKLWDRPAGPGC*RTSPNLNCSSL Trigger: CAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR GCA 72 bp | CCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTaGATGGCACACAATGGAGGAAGCTCCAGCTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PGPVSSKLWSVP*MAHNGGSSSSL Trigger: CAAGGAGCTGGAGCTTCCTCCATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CAA 90 bp | GTTACAGCGTGCAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAGGTGACTAAGCAGCCAGGGCTGGAGTaGTGTCCAACTGAGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: VTACKECKAGDKCPKVTKQPGLE*CPTEWF Trigger: GAACCACTCAGTTGGACACAACTCCAGCCCTGGCTG...CTTAGTCACCTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGGGAAGCTCCAGCTCCTaGTTTCTACTGTCGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LCIAQDLFLQSCGVCLAWGSSSS*FLLSKE Trigger: CTCCTTCGACAGTAGAAACAAGGAGCTGGAGCTTCC...CCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | GACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATaGCACACAATGGAGGAAGCTCCAGCTCCTTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: DLFLQSCGVCLA*HTMEEAPAPCF Trigger: GAAACAAGGAGCTGGAGCTTCCTCCATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | TCCTGGGAGACTGTCCCAGCCAGAAACACCCAAAAGTaGATACCCAGCTACATATGCCAGGCAGAATTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SWETVPARNTQK*IPSYICQAEFA Trigger: AGCAAATTCTGCCTGGCATATGTAGCTGGGTATCCACTTTTGGGTGTTTCTGGCTGGGACAGTCTCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | CAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCTaGTTCTTGTACAACAAGAAAACATTGCTAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QLPEGRGGNTWT*FLYNKKTLLGP Trigger: GGGCCCTAGCAATGTTTTCTTGTTGTACAAGAACCAGGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR-3UTR CAA 90 bp | AAAAATAAAGGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCCATACACCAGAGCCTTaGGCAGACCTCAGAACTGGA | + |
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Preference number: 3 (lower is better) Translates to: KNKGAVQLPEGRGGNTWTHTPEP*ADLRTG Trigger: TCCAGTTCTGAGGTCTGCCAAAGGCTCTGGTGTATG...GGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCCTTTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR GCA 72 bp | GCCAGAAACACCCAAAAGTGGATACCCAGCTACATATaGCAGGCAGAATTTGCTGTTCCCAAGGTTAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: ARNTQKWIPSYI*QAEFAVPKVRA Trigger: GGCTCTAACCTTGGGAACAGCAAATTCTGCCTGGCATATGTAGCTGGGTATCCACTTTTGGGTGTTTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | GTGGGATACAGCCACAGGGACTGTTGTTACCCAAGCTaGTTCTGGAAGTTTCCTGCAAGTTGTAATGGTACC | + |
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Preference number: 3 (lower is better) Translates to: VGYSHRDCCYPS*FWKFPASCNGT Trigger: GGTACCATTACAACTTGCAGGAAACTTCCAGAACCAGCTTGGGTAACAACAGTCCCTGTGGCTGTATCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | TGGGTAAGTCCTTTAGCATCTTATCTGACTCCTCATTaGAAAGGACTCTTGGGTCATCCTGCATCCTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: WVSPLASYLTPH*KGLLGHPASCR Trigger: CCTACAGGATGCAGGATGACCCAAGAGTCCTTTCCAATGAGGAGTCAGATAAGATGCTAAAGGACTTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| 3UTR CCA 72 bp | GCAGTTTTATACCCTAGGCCAAGTAGTGTGGACAGCTaGGTAAGTCCTTTAGCATCTTATCTGACTCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: AVLYPRPSSVDS*VSPLASYLTPH Trigger: ATGAGGAGTCAGATAAGATGCTAAAGGACTTACCCAGCTGTCCACACTACTTGGCCTAGGGTATAAAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | TTTAGGGATAGCACCCTCTGCAAACCCACGCCCAAACCCCCAGGGTGCCCCAGAGGGGCCCTTGGCAGCTaGTGCGCAGCCAGGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FRDSTLCKPTPKPPGCPRGALGS*CAARGA Trigger: AGCACCCCTGGCTGCGCAGCAGCTGCCAAGGGCCCC...TCTGGGGCACCCTGGGGGTTTGGGCGTGGGTTTGCAGAGGGTGCTATCCCTAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | CCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTCTGGCCGGTTTGGGCTaGGGCGCGCTGGGGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PTVSYTGSFGTVLPVQDALAGLG*GALGPL Trigger: CAAGGGCCCCAGCGCGCCGCAGCCCAAACCGGCCAG...AGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | AAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAACCTCTCCCAACCTACGCAGCCAGGGGTGCTaGGGATGCTGGGGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KLWDRPAGPGCWRTSPNLRSQGC*GCWGVR Trigger: CCGGACTCCCCAGCATCCCCAGCACCCCTGGCTGCG...TAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | GTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAACTAAGCTGGCCGGTTTaGGCTGCGGCGCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSYTGSFGTVLPVQDAGELSWPV*AAARWG Trigger: GCCCCAGCGCGCCGCAGCCCAAACCGGCCAGCTTAG...TTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | TGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAGCCCTCGGCCTAAGCTaGCCGGTTTGGGCTGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: CELHRKLWDRPAGPGCWRALGLS*PVWAAA Trigger: CGCCGCAGCCCAAACCGGCCAGCTTAGGCCGAGGGC...TCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | GGCCCTCCAGTCCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTGGTTCCAGCAGGACACAGCGGATGTaGCCAGGGAGGAGAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: GPPVPSQGWSCVQLSGSSRTQRM*PGRRRR Trigger: ACGTCTTCTCCTCCCTGGCCACATCCGCTGTGTCCT...GCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGGACTGGAGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | CCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTACCCGCAGGGCCCAATaGCAGTCTCCAGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTVSYTGSFGTVLPVQDATRRAQ*QSPAAC Trigger: GCAGGCAGCTGGAGACTGGCATTGGGCCCTGCGGGT...AGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCGGTCCAGGATGCTGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGGGTGCTGGGGATGCTaGGGAGTCCGGACGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRMLENLSQPKLQFIGCWGC*GVRTGP Trigger: GGGTCCCGTCCGGACTCCCCAGCATCCCCAGCACCC...AATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGGTTCTGGAAGTTTCCTGCAAGTTGTAATGGTACCCCAGGACCAGAGCGCGCGCTGGGGCCCTTaGCAGCTGCTGCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGSGSFLQVVMVPQDQSARWGP*QLLRSQ Trigger: CTGGCTGCGCAGCAGCTGCCAAGGGCCCCAGCGCGC...GCTCTGGTCCTGGGGTACCATTACAACTTGCAGGAAACTTCCAGAACCAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGGTTCTGGAAGTTTCCTGCAAGTTGTAATGGTACCCCAGGACCAGAGCTGGGCTGCGGCGCGCTaGGGCCCTTGGCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGSGSFLQVVMVPQDQSWAAAR*GPWQLL Trigger: CAGCAGCTGCCAAGGGCCCCAGCGCGCCGCAGCCCA...GCTCTGGTCCTGGGGTACCATTACAACTTGCAGGAAACTTCCAGAACCAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR TCA 90 bp | GGTCAAGTTCTCAGCCTACCACCAGGGCCTTCACCCCCTAGTGCCGCAGCTTTCTCACGCTGGAACCTGTaGTATAGCCCAGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQVLSLPPGPSPPSAAAFSRWNL*YSPGHC Trigger: GCAGTGGCCTGGGCTATATCACAGGTTCCAGCGTGA...GAAAGCTGCGGCACTAGGGGGTGAAGGCCCTGGTGGTAGGCTGAGAACTTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR TCA 90 bp | CCCATACACCAGAGCCTTTGGCAGACCTCAGAACTGGAACTGAGGTCCCGAGACCCAGCAGATGGGAGGTaGAGCTCTGCAGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PIHQSLWQTSELELRSRDPADGR*SSAGPQ Trigger: CTGTGGCCCTGCAGAGCTTCACCTCCCATCTGCTGG...GTCTCGGGACCTCAGTTCCAGTTCTGAGGTCTGCCAAAGGCTCTGGTGTATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGACAGATGAACACTGACTaGAGCAAGCCGGCGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGQMNTD*SKPAPR Trigger: CCGGGGCGCCGGCTTGCTGCAGTCAGTGTTCATCTG...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGACCTTGGCACGGTCGCTaGGGAAGAAGAGAGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CELHRKLWDRPAGPGCWRPWHGR*GRREQW Trigger: CCACTGCTCTCTTCTTCCTCAGCGACCGTGCCAAGG...TCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR TCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGACCTTGGCACGGTCGCTaGGGAAGAAGAGAGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGPWHGR*GRREQW Trigger: CCACTGCTCTCTTCTTCCTCAGCGACCGTGCCAAGG...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTTCTAGAGGGGAATCCACATaGCCAGGGCCCCTGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EWFQHTQPSRLTEDAASSRGEST*PGPLWR Trigger: TCGCCACAGGGGCCCTGGGCATGTGGATTCCCCTCT...AGAAGAAGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | AAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAACCTCTCCCAACCTATGGCGGATCCCAGCATaGCCACAGCACACACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLWDRPAGPGCWRTSPNLWRIPA*PQHTPM Trigger: CATTGGTGTGTGCTGTGGGCATGCTGGGATCCGCCA...TAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAATGGGAGGTGAAGCTCTaGAGGGCCACAGCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSYTGSFGTVLPVQDAGEWEVKL*RATAVA Trigger: AGCCACTGCTGTGGCCCTGCAGAGCTTCACCTCCCA...TTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAACCTCTCCCTGGCAAGGAAGAACATaGCACCCAGGACCACGACAA | + |
|
Preference number: 4 (lower is better) Translates to: HRKLWDRPAGPGCWRTSPWQGRT*HPGPRQ Trigger: TTGTCGTGGTCCTGGGTGGCATGTTCTTCCTTGCCA...GGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTGGTTCCAGCACACACAGCCTCACAGCACACACCAATaGGTCAGCACGTTGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQPGLELCPTEWFQHTQPHSTHQ*VSTLSP Trigger: CGGACTCAACGTGCTGACCCATTGGTGTGTGCTGTG...AGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR TCA 90 bp | GTTACAGCGTGCAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAGGTGACTAAGCGGCGCCCCGGTCCTTaGCCCCAAAGTGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTACKECKAGDKCPKVTKRRPGP*PQSAAG Trigger: TCCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCG...CTTAGTCACCTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR TCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGACAAAAGGGCACAGCATaGGGGCATAGCCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGQKGTA*GHSPGS Trigger: TGAGCCTGGGCTATGCCCTCATGCTGTGCCCTTTTG...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTCAAAAGGGCACAGCATaGGGGCATAGCCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTEWFQHTQPSRLTEDAAQKGTA*GHSPGS Trigger: TGAGCCTGGGCTATGCCCTCATGCTGTGCCCTTTTG...AGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR GCA 90 bp | AACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGATGCCAGTCTCCAGCTaGCTGCTTCACGCTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NCELHRKLWDRPAGPGCWMPVSS*LLHAGT Trigger: GGTTCCAGCGTGAAGCAGGCAGCTGGAGACTGGCAT...CCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | AACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGTGGCGGATCCCAGCATaGCCACAGCACACACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NCELHRKLWDRPAGPGCWWRIPA*PQHTPM Trigger: CATTGGTGTGTGCTGTGGGCATGCTGGGATCCGCCA...CCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGGATGCTGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGCTGTCCGCGGGGAGTCCTTGGTaGTCTGGCGGATTAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPGCWRTSPNLNCSSLLSAGSPW*SGGLGP Trigger: CGGACCTAATCCGCCAGAGCACCAAGGACTCCCCGC...GGACAGCAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTGGTTCCAGCACACACAGCCTTCAGACTTTCACGGATaGAGGAGGCATCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPGLELCPTEWFQHTQPSDFHG*RRHHQL Trigger: CAGCTGGTGATGCCTCCTGCATCCGTGAAAGTCTGA...AGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR CCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGAAGAGCGGGGAGTCCTTaGTGCTCTGGCGGATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGRAGSP*CSGGLG Trigger: ACCTAATCCGCCAGAGCACCAAGGACTCCCCGCTCT...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR TCA 90 bp | GGTCAAGTTCTCAGCCTACCACCAGGGCCTTCACCCCCTAGTGCCGCAGCTTTCACCTGTCCAGGTAGTTaGGCACGTTGCCTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVLSLPPGPSPPSAAAFTCPGS*ARCLNS Trigger: TGAGTTTAGGCAACGTGCTCAACTACCTGGACAGGT...GAAAGCTGCGGCACTAGGGGGTGAAGGCCCTGGTGGTAGGCTGAGAACTTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR TCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGAGGATCACCTTTCTATTaGAGCGGTCGCCCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGGSPFY*SGRPGS Trigger: GCTACCTGGGCGACCGCTTCAATAGAAAGGTGATCC...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | TTAGGGTGGGAGCCAGGCTGGTCTTTAGGGATAGCACCCTCTGCAAACCCACGCCACAGGGCGGGCTGTTaGAAGTCTCTGCTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGWEPGWSLGIAPSANPRHRAGC*KSLLSF Trigger: AAAAGACAGCAGAGACTTGCAACAGCCCGCCCTGTG...GCGTGGGTTTGCAGAGGGTGCTATCCCTAAAGACCAGCCTGGCTCCCACCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | GTACCCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGACACAGCACACACCAATaGGTCAGCACGTTGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPNCELHRKLWDRPAGPGHSTHQ*VSTLSP Trigger: CGGACTCAACGTGCTGACCCATTGGTGTGTGCTGTG...TCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGCACACAATGCGTCCCCCAGCAGATaGGAGGTGAAGCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGPVSSKLWSVPCMAHNASPSR*EVKLCR Trigger: CCTGCAGAGCTTCACCTCCCATCTGCTGGGGGACGC...ATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTGGTTCCAGCACACACAGCCTGGAAGAAGAGAGCAGTaGCAAGGAAGAACATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPGLELCPTEWFQHTQPGRREQ*QGRTCH Trigger: GTGGCATGTTCTTCCTTGCCACTGCTCTCTTCTTCC...AGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATAAAGGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCGGACCCGCCTCACGCTaGCGGACAACGTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KNKGAVQLPEGRGGNTWTGPASR*RTTSAP Trigger: AGGTGCAGACGTTGTCCGGCAGCGTGAGGCGGGTCC...GGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCCTTTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR TCA 90 bp | AAAAATAAAGGAGCAGTTCAGCTTCCGGAAGGAAGAGGAGGCAACACTTGGACCGCTGCAGATGAACACTaGCTGCAGCAAGCCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNKGAVQLPEGRGGNTWTAADEH*LQQAGA Trigger: GGCGCCGGCTTGCTGCAGTCAGTGTTCATCTGCAGC...GGTCCAAGTGTTGCCTCCTCTTCCTTCCGGAAGCTGAACTGCTCCTTTATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | ATCCTGGGAGACTGTCCCAGCCAGAAACACCCAAAAGTGGATACCCAGCTACATCAGTCTCCAGCTGCCTaGTTCACGCTGGAACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGDCPSQKHPKVDTQLHQSPAA*FTLEPV Trigger: CACAGGTTCCAGCGTGAAGCAGGCAGCTGGAGACTG...ATGTAGCTGGGTATCCACTTTTGGGTGTTTCTGGCTGGGACAGTCTCCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGCTGTCCCAGCGGCACCACTCAGACTTTCACGGATaGAGGAGGCATCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRTSPNLNCSSLLSQRHHSDFHG*RRHHQL Trigger: CAGCTGGTGATGCCTCCTGCATCCGTGAAAGTCTGA...GTGGTGCCGCTGGGACAGCAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTTCTTGGTGGGTGCTATGGTaGAGTAGCTGGCTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: EWFQHTQPSRLTEDAASSWWVLW*SSWLHQ Trigger: TTGGTGAAGCCAGCTACTCCACCATAGCACCCACCA...AGAAGAAGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCAACTGAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCCTCTCTTAGTGGCTaGGACCAAGATGAGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPTEWFQHTQPSRLTEDAASLSG*DQDEDE Trigger: CTCATCCTCATCTTGGTCCCAGCCACTAAGAGAGGC...CGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAAAGCGCCTACAATGCTaGTCTTGGCAGCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CELHRKLWDRPAGPGCWRKRLQC*SWQPQR Trigger: TCTTTGTGGCTGCCAAGACCAGCATTGTAGGCGCTT...TCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGCACACAATAGAGCGGGGAGTCCTTaGTGCTCTGGCGGATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPVSSKLWSVPCMAHNRAGSP*CSGGLG Trigger: ACCTAATCCGCCAGAGCACCAAGGACTCCCCGCTCT...ATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| 3UTR CAA 72 bp | CCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTaGCATGGCACACAATGGAGGAAGCTCCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRTCFFKAVECA*HGTQWRKLQLL Trigger: AAGGAGCTGGAGCTTCCTCCATTGTGTGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGGCCAATGATGGTGGGTaGTATGGTGGAGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCIAQDLFLQSCGVCLAWANDGG*YGGVAG Trigger: GCCAGCTACTCCACCATAGCACCCACCATCATTGGC...CCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTTCTGGAAGAAGAGAGCAGTaGCAAGGAAGAACATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EWFQHTQPSRLTEDAASSGRREQ*QGRTCH Trigger: GTGGCATGTTCTTCCTTGCCACTGCTCTCTTCTTCC...AGAAGAAGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
||
| 3UTR CAA 72 bp | GAAGCCACAGCAAGTGGGATACAGCCACAGGGACTGTaGTTACCCAAGCTGGTTCTGGAAGTTTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EATASGIQPQGL*LPKLVLEVSCK Trigger: CTTGCAGGAAACTTCCAGAACCAGCTTGGGTAACAACAGTCCCTGTGGCTGTATCCCACTTGCTGTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGCTGTCCCAGCGGCACCACTTGACCCCAAAGTGCTaGTGGATGTCCAGAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WRTSPNLNCSSLLSQRHHLTPKC*WMSRRT Trigger: TGTTCTTCTGGACATCCAGCAGCACTTTGGGGTCAA...GTGGTGCCGCTGGGACAGCAATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTGGAGAAATACATGAGGATGTCTaGAGTGATGGCCCAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSYTGSFGTVLPVQDAGEIHEDV*SDGPVR Trigger: TCTAACTGGGCCATCACTGCAGACATCCTCATGTAT...TTCTCCAGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGTGGCAAGGAAGAACATaGCACCCAGGACCACGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LCIAQDLFLQSCGVCLAWWQGRT*HPGPRQ Trigger: TTGTCGTGGTCCTGGGTGGCATGTTCTTCCTTGCCA...CCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGGAAGTTTCCTGCAAGTTGTAATGGTACCCCAGGACCAGAGCCACCTTTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSFLQVVMVPQDQSHLSLTPK*CWMSRR Trigger: TCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGA...AAGGTGGCTCTGGTCCTGGGGTACCATTACAACTTGCAGGAAACTTCCAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCGGTCCAGGATGCTGGAGAACCTCTCCCAACCTAAACTGCAGTTCATTGATCATGAGGATGTCTaGAGTGATGGCCCAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRMLENLSQPKLQFIDHEDV*SDGPVR Trigger: TCTAACTGGGCCATCACTGCAGACATCCTCATGATC...AATGAACTGCAGTTTAGGTTGGGAGAGGTTCTCCAGCATCCTGGACCGGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144940.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGGAGACTGTCCCAGCCAGAAACACCCAAAAGTGGATACCCAGCTACATCACTGCCCAGGGGGATaGCAAAATAGAAGACAGATA | + |
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Preference number: 4 (lower is better) Translates to: ILGDCPSQKHPKVDTQLHHCPGG*QNRRQI Trigger: TATCTGTCTTCTATTTTGCCATCCCCCTGGGCAGTG...ATGTAGCTGGGTATCCACTTTTGGGTGTTTCTGGCTGGGACAGTCTCCCAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CCA 90 bp | AGCCACAGGGACTGTTGTTACCCAAGCTGGTTCTGGAAGTTTCCTGCAAGTTGTAAGCGCCTACAATGCTaGTCTTGGCAGCCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SHRDCCYPSWFWKFPASCKRLQC*SWQPQR Trigger: TCTTTGTGGCTGCCAAGACCAGCATTGTAGGCGCTT...ACAACTTGCAGGAAACTTCCAGAACCAGCTTGGGTAACAACAGTCCCTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR GCA 90 bp | CCAACTGAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGGCTTCTCTCCAACAAAAATaGAGATATAAGCGCCTACAA | + |
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Preference number: 4 (lower is better) Translates to: PTEWFQHTQPSRLTEDAASLQQK*RYKRLQ Trigger: TTGTAGGCGCTTATATCTGCATTTTTGTTGGAGAGA...AGCCGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR GCA 90 bp | CCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTTCTCTCCAACAAAAATaGAGATATAAGCGCCTACAA | + |
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Preference number: 4 (lower is better) Translates to: PTVSYTGSFGTVLPVQDASLQQK*RYKRLQ Trigger: TTGTAGGCGCTTATATCTGCATTTTTGTTGGAGAGA...AGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| 3UTR CAA 72 bp | TTAGCATCTTATCTGACTCCTCATTGGAAAGGACTCTaGGGTCATCCTGCATCCTGTAGGATGAGGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LASYLTPHWKGL*GHPASCRMRWL Trigger: AAGCCACCTCATCCTACAGGATGCAGGATGACCCAAGAGTCCTTTCCAATGAGGAGTCAGATAAGATGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 90 bp | GGGTGCTGGGGATGCTGGGGAGTCCGGACGGGACCCGCCTCACGCTaGCGGACAACGTCTGCACCTCTTCGTCGGCGGACACGACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GCWGCWGVRTGPASR*RTTSAPLRRRTRLQ Trigger: CTGGAGTCGTGTCCGCCGACGAAGAGGTGCAGACGTTGTCCGGCAGCGTGAGGCGGGTCCCGTCCGGACTCCCCAGCATCCCCAGCACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS TCA 90 bp | GCGGATCCCAGCATGCCCACAGCACACACCAATGGGTCAGCACGTTaGGTCCGCAGGCGGCACCAACGAGTGGCTCCCGCGCCCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: ADPSMPTAHTNGSAR*VRRRHQRVAPAPVT Trigger: AGTCACGGGCGCGGGAGCCACTCGTTGGTGCCGCCTGCGGACTCAACGTGCTGACCCATTGGTGTGTGCTGTGGGCATGCTGGGATCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCCACAGCAAGTGGGATACAGCCACAGGGACTGTTGTTACCCAAGCTGGGCGCGCTGGGGCCCTaGGCAGCTGCTGCGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: TEATASGIQPQGLLLPKLGALGP*AAAAQP Trigger: TGGCTGCGCAGCAGCTGCCAAGGGCCCCAGCGCGCC...CAGCTTGGGTAACAACAGTCCCTGTGGCTGTATCCCACTTGCTGTGGCTTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CCA 90 bp | GAATCCACATGCCCAGGGCCCCTGTGGCGAAGGACACAGCGGATGTaGCCAGGGAGGAGAAGACGTAACTGCGGTTTCGGATCAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ESTCPGPLWRRTQRM*PGRRRRNCGFGSGP Trigger: AGGCCCTGATCCGAAACCGCAGTTACGTCTTCTCCTCCCTGGCCACATCCGCTGTGTCCTTCGCCACAGGGGCCCTGGGCATGTGGATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCAGGGCTGGAGTTGTGTCCAACTGAGTGGTTCCAGCACACACAGCCTCAGAGCGGGGAGTCCTaGGTGCTCTGGCGGATTAGG | + |
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Preference number: 5 (lower is better) Translates to: PQPGLELCPTEWFQHTQPQSGES*VLWRIR Trigger: CCTAATCCGCCAGAGCACCAAGGACTCCCCGCTCTG...AGGCTGTGTGTGCTGGAACCACTCAGTTGGACACAACTCCAGCCCTGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS GCA 90 bp | AACACTGACTGCAGCAAGCCGGCGCCCCGGTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGAACACCTGCCACAGTGTACCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: NTDCSKPAPRSLTPK*CWMSRRTPATVYLS Trigger: GGACAGGTACACTGTGGCAGGTGTTCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCGGCTTGCTGCAGTCAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | GTGTATAGCCCAGGACCTGTTTCTTCAAAGCTGTGGAGTGTGCCTTGCATGGCACCGGCGCCCCGGTCCTaGACCCCAAAGTGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VYSPGPVSSKLWSVPCMAPAPRS*TPKCCW Trigger: CCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCGG...TGCCATGCAAGGCACACTCCACAGCTTTGAAGAAACAGGTCCTGGGCTATACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | CCAACTGTGAGTTACACAGGAAGCTTTGGGACCGTCCTGCCGGTCCAGGATGCTCAGAGCGGGGAGTCCTaGGTGCTCTGGCGGATTAGG | + |
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Preference number: 5 (lower is better) Translates to: PTVSYTGSFGTVLPVQDAQSGES*VLWRIR Trigger: CCTAATCCGCCAGAGCACCAAGGACTCCCCGCTCTG...AGCATCCTGGACCGGCAGGACGGTCCCAAAGCTTCCTGTGTAACTCACAGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS TCA 90 bp | GCATCACCAGCTGGTTCACCTGCTGCTCAGCCTTGGCACGGTCGCTaGGGAAGAAGAGAGCAGTGGCAAGGAAGAACATGCCACCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ASPAGSPAAQPWHGR*GRREQWQGRTCHPG Trigger: TCCTGGGTGGCATGTTCTTCCTTGCCACTGCTCTCTTCTTCCTCAGCGACCGTGCCAAGGCTGAGCAGCAGGTGAACCAGCTGGTGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045303.10 ENSMUST00000144940.2 |
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| CDS-3UTR CAA 90 bp | GACAGCTGGGTAAGTCCTTTAGCATCTTATCTGACTCCTCATTGGAAAGGACTCCCTAAGCTGGCCGGTTaGGGCTGCGGCGCGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: DSWVSPLASYLTPHWKGLPKLAG*GCGALG Trigger: CCCCAGCGCGCCGCAGCCCAAACCGGCCAGCTTAGG...GAGTCCTTTCCAATGAGGAGTCAGATAAGATGCTAAAGGACTTACCCAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | TGTCCAACTGAGTGGTTCCAGCACACACAGCCTTCCAGGCTAACTGAGGATGCGCCACAGGGCGGGCTGTaGCAAGTCTCTGCTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CPTEWFQHTQPSRLTEDAPQGGL*QVSAVF Trigger: AAAGACAGCAGAGACTTGCAACAGCCCGCCCTGTGG...CGCATCCTCAGTTAGCCTGGAAGGCTGTGTGTGCTGGAACCACTCAGTTGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | GGCTGGGGTAAGAAAAGGTCAAGTTCTCAGCCTACCACCAGGGCCTTCACCCCCAGTCTCTGCTGTCTTTaGTACAACTTGAGCACGGTG | + |
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Preference number: 5 (lower is better) Translates to: GWGKKRSSSQPTTRAFTPSLCCL*YNLSTV Trigger: CACCGTGCTCAAGTTGTACAAAAGACAGCAGAGACT...GGGGGTGAAGGCCCTGGTGGTAGGCTGAGAACTTGACCTTTTCTTACCCCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS-3UTR CAA 90 bp | GTTACAGCGTGCAAGGAGTGTAAAGCTGGGGATAAGTGCCCAAAGGTGACTAAGAAGATGAGGCTGTCTTaGGCTCCACAGGGCGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VTACKECKAGDKCPKVTKKMRLS*APQGGL Trigger: CAGCCCGCCCTGTGGAGCCAAAGACAGCCTCATCTT...CTTAGTCACCTTTGGGCACTTATCCCCAGCTTTACACTCCTTGCACGCTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 90 bp | GATGAGGCTGTCTTTGGCTCCACAGGGCGGGCTGTTGCAAGTCTCTaGTGTCTTTTGTACAACTTGAGCACGGTGAAGATAGAGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DEAVFGSTGRAVASL*CLLYNLSTVKIEGN Trigger: ATTCCCCTCTATCTTCACCGTGCTCAAGTTGTACAAAAGACAGCAGAGACTTGCAACAGCCCGCCCTGTGGAGCCAAAGACAGCCTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CCA 72 bp | TGGCAGCTGCTGCGCAGCCAGGGGTGCTGGGGATGCTaGGGAGTCCGGACGGGACCCGCCTCACGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: WQLLRSQGCWGC*GVRTGPASRCR Trigger: CCGGCAGCGTGAGGCGGGTCCCGTCCGGACTCCCCAGCATCCCCAGCACCCCTGGCTGCGCAGCAGCTGCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | GGATGCTGGGGAGTCCGGACGGGACCCGCCTCACGCTaGCGGACAACGTCTGCACCTCTTCGTCGGCGGACA | + |
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Preference number: 6 (lower is better) Translates to: GCWGVRTGPASR*RTTSAPLRRRT Trigger: TGTCCGCCGACGAAGAGGTGCAGACGTTGTCCGGCAGCGTGAGGCGGGTCCCGTCCGGACTCCCCAGCATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | CTTCCAGCGTCCCCCAGCAGATGGGAGGTGAAGCTCTaGAGGGCCACAGCAGTGGCTCGCCGAGTGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LPASPSRWEVKL*RATAVARRVGM Trigger: CATCCCCACTCGGCGAGCCACTGCTGTGGCCCTGCAGAGCTTCACCTCCCATCTGCTGGGGGACGCTGGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CCA 72 bp | TGCCCAGGGCCCCTGTGGCGAAGGACACAGCGGATGTaGCCAGGGAGGAGAAGACGTAACTGCGGTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CPGPLWRRTQRM*PGRRRRNCGFG Trigger: TCCGAAACCGCAGTTACGTCTTCTCCTCCCTGGCCACATCCGCTGTGTCCTTCGCCACAGGGGCCCTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | TGCAGCAAGCCGGCGCCCCGGTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGAACACCTGCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: CSKPAPRSLTPK*CWMSRRTPATV Trigger: CACTGTGGCAGGTGTTCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCGGCTTGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | AGCAAGCCGGCGCCCCGGTCCTTGACCCCAAAGTGCTaGTGGATGTCCAGAAGAACACCTGCCACAGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SKPAPRSLTPKC*WMSRRTPATVY Trigger: GTACACTGTGGCAGGTGTTCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCGGCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CAA 90 bp | AAGCTGCAGATGAACACTGACTGCAGCAAGCCGGCGCCCCGGTCCTaGACCCCAAAGTGCTGCTGGATGTCCAGAAGAACACCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: KLQMNTDCSKPAPRS*TPKCCWMSRRTPAT Trigger: TGTGGCAGGTGTTCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGGGGCGCCGGCTTGCTGCAGTCAGTGTTCATCTGCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CCA 72 bp | CTCAGGAACTCCCAGAGCGGGGAGTCCTTGGTGCTCTaGCGGATTAGGTCCGAGATCATGAGGATGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LRNSQSGESLVL*RIRSEIMRMSA Trigger: TGCAGACATCCTCATGATCTCGGACCTAATCCGCCAGAGCACCAAGGACTCCCCGCTCTGGGAGTTCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144940.2 |
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| CDS TCA 72 bp | GAAGAACACCTGCCACAGTGTACCTGTCCAGGTAGTTaGGCACGTTGCCTAAACTCAGGATGGCAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EEHLPQCTCPGS*ARCLNSGWQQL Trigger: CAGCTGCTGCCATCCTGAGTTTAGGCAACGTGCTCAACTACCTGGACAGGTACACTGTGGCAGGTGTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | TCGCCGAGTGGGGATGACCACATACATGAGGATGTCTaGAGTGATGGCCCAGTTAGAAAACAGCAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPSGDDHIHEDV*SDGPVRKQQCL Trigger: GAGACACTGCTGTTTTCTAACTGGGCCATCACTGCAGACATCCTCATGTATGTGGTCATCCCCACTCGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS GCA 72 bp | GTCTTTGGCTCCACAGGGCGGGCTGTTGCAAGTCTCTaGTGTCTTTTGTACAACTTGAGCACGGTGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: VFGSTGRAVASL*CLLYNLSTVKI Trigger: TATCTTCACCGTGCTCAAGTTGTACAAAAGACAGCAGAGACTTGCAACAGCCCGCCCTGTGGAGCCAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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| CDS CAA 72 bp | CGGGCTGTTGCAAGTCTCTGCTGTCTTTTGTACAACTaGAGCACGGTGAAGATAGAGGGGAATCCACATGCC | + |
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Preference number: 6 (lower is better) Translates to: RAVASLCCLLYN*STVKIEGNPHA Trigger: GGCATGTGGATTCCCCTCTATCTTCACCGTGCTCAAGTTGTACAAAAGACAGCAGAGACTTGCAACAGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045303.10 |
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