Pregenerated sensors for SPNS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030741Ensembl transcript IDs: ENSMUST00000032994.15, ENSMUST00000119754.8, ENSMUST00000119846.8, ENSMUST00000138141.8, ENSMUST00000150476.3, ENSMUST00000205366.2, ENSMUST00000205930.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCAGGGCCAGGAAGAGGAAAGGCGCCGAACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGCCCGAGGGTTGAAGCGGCGAAGGCG | + |
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Preference number: 1 (lower is better) Translates to: GQGQEEERRRTQEAS*TDEWVSPRVEAAKA Trigger: CGCCTTCGCCGCTTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGTTCGGCGCCTTTCCTCTTCCTGGCCCTGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| 3UTR TCA 90 bp | GAGCTGGGAGATATCCCAGGGCTTCCTTCTTGGACCTGGGCCTGGTaGGGGCTTCTGCCTGGGAACCGTCTTGGGTGGGCCCAAGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ELGDIPGLPSWTWAW*GLLPGNRLGWAQGP Trigger: TGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGAAGCCCTGGGATATCTCCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR TCA 90 bp | ACAGACCCTGCACGTGGAGTTGAGCCCGCCGGCGGTCATCTTCAATaGACATGGCGGTGCCCAGGAAGGCCGCACCACCCAGTGCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TDPARGVEPAGGHLQ*TWRCPGRPHHPVPQ Trigger: TTGGGGCACTGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTTCATTGAAGATGACCGCCGGCGGGCTCAACTCCACGTGCAGGGTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR GCA 90 bp | ATATCCCAGGGCTTCCTTCTTGGACCTGGGCCTGGTGAGGGCTTCTaGCTGGGAACCGTCTTGGGTGGGCCCAAGGCCCAGCTGCGATGC | + |
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Preference number: 1 (lower is better) Translates to: ISQGFLLGPGPGEGF*LGTVLGGPKAQLRC Trigger: GCATCGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGAAGCCCTGGGATAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR CCA 90 bp | GGTGGTGAACCTGAGTGGCGCTCCACGGCTCCTCTTGGGGGCTCCTaGACCACCAGGAACAGCAGCAGGACAGCCAGCACTCCTAGACCT | + |
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Preference number: 1 (lower is better) Translates to: GGEPEWRSTAPLGGS*TTRNSSRTASTPRP Trigger: AGGTCTAGGAGTGCTGGCTGTCCTGCTGCTGTTCCTGGTGGTCCAGGAGCCCCCAAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| 3UTR TCA 90 bp | CCAGGAAGGCCGCACCACCCAGTGCCCCAACGAAAGCACAGAGCATaGGCGAGAACTGCAGAGCCCGGAACTCGGACAGGAAGGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: PGRPHHPVPQRKHRA*ARTAEPGTRTGRKG Trigger: CCCCTTCCTTCCTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCTCTGTGCTTTCGTTGGGGCACTGGGTGGTGCGGCCTTCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR GCA 90 bp | GCACCACCCAGTGCCCCAACGAAAGCACAGAGCATGAGCGAGAACTaGAGAGCCCGGAACTCGGACAGGAAGGAAGGGGGCCAGCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: APPSAPTKAQSMSEN*RARNSDRKEGGQLR Trigger: ACGGAGCTGGCCCCCTTCCTTCCTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCTCTGTGCTTTCGTTGGGGCACTGGGTGGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR TCA 90 bp | CAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTCGCTaGGGTACTACAATCCGGTCATCTGAGGGCCCAGACTCATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QMSTLDTGTRVERPR*GTTIRSSEGPDSCN Trigger: GTTGCATGAGTCTGGGCCCTCAGATGACCGGATTGTAGTACCTCAGCGAGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR GCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTaGCCATGTAGTGTCTGGGAGCTGGGAGATATCCCAGGGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RTPLPRFWTPISSLG*PCSVWELGDIPGLP Trigger: AGGAAGCCCTGGGATATCTCCCAGCTCCCAGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR CCA 90 bp | GTGGGACAGCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTaGGATCACCACGTACAACAGGATGTCAGCCACAATGGCCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: VGQHYLEGLSRGPSS*DHHVQQDVSHNGPV Trigger: AACTGGGCCATTGTGGCTGACATCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTGTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR CCA 90 bp | CATCTCCTAGCAAGTGGGACAGCACTATCTGGAAGGCCTCAGCCGTaGACCGTCGAGTTGGGATCACCACGTACAACAGGATGTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HLLASGTALSGRPQP*TVELGSPRTTGCQP Trigger: TGGCTGACATCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTGTCCCACTTGCTAGGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR TCA 90 bp | TGTAACCTAGACCACTGCCCACAGGGATGGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGTCTGGCTGGAATCCTGGCTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: CNLDHCPQGWQSRRY*ASDSAGLAGILAPF Trigger: AAATGGAGCCAGGATTCCAGCCAGACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR CAA 90 bp | GAACCCAGGAGGCCAGCTGCACAGACGAGTGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCCAGGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: EPRRPAAQTSGSARG*KRRRRRLISTPRPT Trigger: TGTGGGCCTGGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGGTTGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCCAGGCCCACACCCCTGGTGAGGGCTTCTaGCTGGGAACCGTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PRVEAAKAAADLHSQAHTPGEGF*LGTVLG Trigger: ACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGG...GGTGTGGGCCTGGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGGTTGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCCAGGCCCACACCACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCT | + |
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Preference number: 2 (lower is better) Translates to: PRVEAAKAAADLHSQAHTTRRAQ*QSPATS Trigger: AGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGT...GGTGTGGGCCTGGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGCGGTCATCTTCAATGAACATGGCGGTGCCCAGGAAGGCCGCACCACCCAGTGGACCTGGGCCTGGTaGGGGCTTCTGCCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PAVIFNEHGGAQEGRTTQWTWAW*GLLPGN Trigger: GTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCA...CTGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTTCATTGAAGATGACCGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | GCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: APAPQMSTLDTGTRVERPTQEAS*TDEWVS Trigger: GCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGT...AGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | GCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTAGCATGAGCGAGAACTaGAGAGCCCGGAACTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: APAPQMSTLDTGTRVERPSMSEN*RARNSD Trigger: GTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCT...AGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTGGGAACCGTCTTGGGTaGGCCCAAGGCCCAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSGNRLG*AQGPAA Trigger: CGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCC...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCAGGAACGCTGGGGCCCAGAGAGCCAGGGAGCCCGTGACAAAGGCCACAGTAGTGTCTGGGAGCTaGGAGATATCCCAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RSRNAGAQRAREPVTKATVVSGS*EISQGF Trigger: GAAGCCCTGGGATATCTCCCAGCTCCCAGACACTAC...TGTGGCCTTTGTCACGGGCTCCCTGGCTCTCTGGGCCCCAGCGTTCCTGCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | AACATGGCGGTGCCCAGGAAGGCCGCACCACCCAGTGCCCCAACGAAAGCACAGTATAGGTGGCCACGATaGTACCTCGGGCACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: NMAVPRKAAPPSAPTKAQYRWPR*YLGHRP Trigger: TGGCCTGTGCCCGAGGTAGCATCGTGGCCACCTATA...CTGTGCTTTCGTTGGGGCACTGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGAGGGCTTCTGCCTaGGAACCGTCTTGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVVRASA*EPSWVG Trigger: GCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCAC...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTCCTGGTGAGGGCTTCTaGCTGGGAACCGTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RTPLPRFWTPISSLGCPCPGEGF*LGTVLG Trigger: ACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGG...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCGCACCACCCAGTGCCCCAACGAAAGCACAGAGCATGAGCGAGAACTGCCCGACTCCGCTGGTCTaGCTGGAATCCTGGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: KAAPPSAPTKAQSMSENCPTPLV*LESWLH Trigger: ATGGAGCCAGGATTCCAGCCAGACCAGCGGAGTCGG...GCAGTTCTCGCTCATGCTCTGTGCTTTCGTTGGGGCACTGGGTGGTGCGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTCCTGGTGAGGGCTTCTaGCTGGGAACCGTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSPGEGF*LGTVLG Trigger: ACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGG...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTCCCCTTCCCCGTTTCTaGACTCCCATCTCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTPLPRFWTPISSLGCPCPLPRF*TPISSL Trigger: CAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAACAGCAGCAGGACAGCCAGCACTCCTAGACCTGGTGTCACCCGTAGAAGCATCCGACTCCGCTaGTCTGGCTGGAATCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TRNSSRTASTPRPGVTRRSIRLR*SGWNPG Trigger: GCCAGGATTCCAGCCAGACCAGCGGAGTCGGATGCT...TCTACGGGTGACACCAGGTCTAGGAGTGCTGGCTGTCCTGCTGCTGTTCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTGGGATCACCACGTAGGTGGTGAACCTGAGTaGCGCTCCACGGCTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QHYLEGLSRGPSSWDHHVGGEPE*RSTAPL Trigger: AAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC...TACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTATCTCTTCCCTGGGCTaGCCATGTAGTGTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RTPLPRFWTPISSLGCPCISSLG*PCSVWE Trigger: CTCCCAGACACTACATGGGCAGCCCAGGGAAGAGAT...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGCGGTCATCTTCAATGAACATGGCGGTGCCCAGGAAGGCCGCACCACCCAGTGTAACCTAGACCACTaGCCACAGGGATGGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PAVIFNEHGGAQEGRTTQCNLDH*PQGWQS Trigger: ACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA...CTGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTTCATTGAAGATGACCGCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR CAA 90 bp | AGTGGGACAGCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTaGGGATCACCACGTACAACAGGATGTCAGCCACAATGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SGTALSGRPQPWTVE*GSPRTTGCQPQWPS Trigger: ACTGGGCCATTGTGGCTGACATCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTGTCCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTTGGACCTGGGCCTGGTaGGGGCTTCTGCCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PLQIAPNPLGCPSREDTPWTWAW*GLLPGN Trigger: GTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCA...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGAGCATGAGCGAGAACTGCAGAGCCCGGAACTCGGACAGGAAGGAAGGGTCAGAGGAAGAGCATaGATCTCCAGGGAGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: STEHERELQSPELGQEGRVRGRA*ISRETG Trigger: CCCTGTCTCCCTGGAGATTCATGCTCTTCCTCTGAC...CCTTCCTTCCTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCTCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAGGAAGAGCATGAATCTCCAGGGAGACAGGGCGGAGTCTCTCCCAGAAGGTGGTGAACCTGAGTaGCGCTCCACGGCTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: CQRKSMNLQGDRAESLPEGGEPE*RSTAPL Trigger: AAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC...TTCTGGGAGAGACTCCGCCCTGTCTCCCTGGAGATTCATGCTCTTCCTCTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCGGGAACCGTCTTGGGTaGGCCCAAGGCCCAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: IPLQIAPNPLGCPSREDTGNRLG*AQGPAA Trigger: CGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCC...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCTGGACCTGGGCCTGGTaGGGGCTTCTGCCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: IPLQIAPNPLGCPSREDTWTWAW*GLLPGN Trigger: GTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCA...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCGTGAGGGCTTCTGCCTaGGAACCGTCTTGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: IPLQIAPNPLGCPSREDTVRASA*EPSWVG Trigger: GCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCAC...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACTAGGATTTCGTGCCAGTGCCTTCAGATCTGCCCACCAAGAGGTGGGGCTCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ETRISCQCLQICPPRGGAQSRRY*ASDSAG Trigger: ACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTG...AGCCCCACCTCTTGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCTAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTGTAGTGTCTGGGAGCTaGGAGATATCCCAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLQIAPNPLGCPSREDTPVVSGS*EISQGF Trigger: GAAGCCCTGGGATATCTCCCAGCTCCCAGACACTAC...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCGGGAACCGTCTTGGGTaGGCCCAAGGCCCAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: SDYKFYSITNSTKPLGLSGNRLG*AQGPAA Trigger: CGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCC...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGACCTGGTGAGGGCTTCTaGCTGGGAACCGTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRPGEGF*LGTVLG Trigger: ACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGG...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCT | + |
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Preference number: 2 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRTRRAQ*QSPATS Trigger: AGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGT...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGTAGTGTCTGGGAGCTaGGAGATATCCCAGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NFIPLQIAPNPLGCPSREVVSGS*EISQGF Trigger: GAAGCCCTGGGATATCTCCCAGCTCCCAGACACTAC...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGCTCCCATCTCTTCCCTaGGCTGCCCATGTAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NFIPLQIAPNPLGCPSRELPSLP*AAHVVS Trigger: AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAG...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCCCCCTTCCCCGTTTCTaGACTCCCATCTCTTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SDYKFYSITNSTKPLGLSPLPRF*TPISSL Trigger: CAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGATGCCCATGTAGTGTCTaGGAGCTGGGAGATATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRCPCSV*ELGDIP Trigger: TGGGATATCTCCCAGCTCCCAGACACTACATGGGCA...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGCGGTCATCTTCAATGAACATGGCGGTGCCCAGGAAGGCCGCACCACCCAGGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: PAVIFNEHGGAQEGRTTQGSARG*KRRRRR Trigger: CCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCC...CTGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTTCATTGAAGATGACCGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTTGCCTGGGAACCGTCTaGGGTGGGCCCAAGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: APAPQMSTLDTGTRVERPCLGTV*GGPKAQ Trigger: CTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCA...AGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119754.8 ENSMUST00000138141.8 |
||
| 3UTR CCA 72 bp | CTGGGCCTGGTGAGGGCTTCTGCCTGGGAACCGTCTTaGGTGGGCCCAAGGCCCAGCTGCGATGCATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLVRASAWEPS*VGPRPSCDASV Trigger: CACTGATGCATCGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR CCA 72 bp | TCCTTCTTGGACCTGGGCCTGGTGAGGGCTTCTGCCTaGGAACCGTCTTGGGTGGGCCCAAGGCCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SFLDLGLVRASA*EPSWVGPRPSC Trigger: GCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTGCCTGGGAACCGTCTaGGGTGGGCCCAAGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMCLGTV*GGPKAQ Trigger: CTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCA...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR TCA 72 bp | GCACGTGGAGTTGAGCCCGCCGGCGGTCATCTTCAATaGACATGGCGGTGCCCAGGAAGGCCGCACCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARGVEPAGGHLQ*TWRCPGRPHHP Trigger: TGGGTGGTGCGGCCTTCCTGGGCACCGCCATGTTCATTGAAGATGACCGCCGGCGGGCTCAACTCCACGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR GCA 72 bp | CAGGAAGAGGAAAGGCGCCGAACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGCCCGAGGGTTGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: QEEERRRTQEAS*TDEWVSPRVEA Trigger: CGCTTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGTTCGGCGCCTTTCCTCTTCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTATGCCTGGGAACCGTCTaGGGTGGGCCCAAGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVCLGTV*GGPKAQ Trigger: CTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCA...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTTGCCTGGGAACCGTCTaGGGTGGGCCCAAGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TPLPRFWTPISSLGCPCSCLGTV*GGPKAQ Trigger: CTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCA...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCCCCAGGGCTTCCTTCTaGGACCTGGGCCTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLPRFWTPISSLGCPCSVPRASF*DLGLVR Trigger: CCTCACCAGGCCCAGGTCCAAGAAGGAAGCCCTGGG...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| 3UTR TCA 72 bp | ACGCTGGACACGGGGACTCGGGTAGAACGGCCTCGCTaGGGTACTACAATCCGGTCATCTGAGGGCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLDTGTRVERPR*GTTIRSSEGPD Trigger: GTCTGGGCCCTCAGATGACCGGATTGTAGTACCTCAGCGAGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR GCA 72 bp | AGTGCCCCAACGAAAGCACAGAGCATGAGCGAGAACTaGAGAGCCCGGAACTCGGACAGGAAGGAAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPTKAQSMSEN*RARNSDRKEGG Trigger: GCCCCCTTCCTTCCTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCTCTGTGCTTTCGTTGGGGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR TCA 72 bp | GCCAGCTCCGTCGGAGGCGGTCAGAGATTAGACCAATaGGGTAAGGGCTCCCTGCATCTCCTAGCAAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASSVGGGQRLDQ*GKGSLHLLASG Trigger: CCCACTTGCTAGGAGATGCAGGGAGCCCTTACCTCATTGGTCTAATCTCTGACCGCCTCCGACGGAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR GCA 72 bp | AGCACTCCTAGACCTGGTGTCACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCTTTCACTTTGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: STPRPGVTRRAQ*QSPATSFTLEP Trigger: TGGCTCCAAAGTGAAAGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGTGACACCAGGTCTAGGAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| 3UTR CCA 72 bp | GCAAGTGGGACAGCACTATCTGGAAGGCCTCAGCCGTaGACCGTCGAGTTGGGATCACCACGTACAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASGTALSGRPQP*TVELGSPRTTG Trigger: TCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTGTCCCACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR TCA 72 bp | GACCACTGCCCACAGGGATGGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGTCTGGCTGGAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DHCPQGWQSRRY*ASDSAGLAGIL Trigger: CAGGATTCCAGCCAGACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTGCCATCCCTGTGGGCAGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR CCA 72 bp | CACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTaGGATCACCACGTACAACAGGATGTCAGCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: HYLEGLSRGPSS*DHHVQQDVSHN Trigger: ATTGTGGCTGACATCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| 3UTR CAA 72 bp | AGGCCAGCTGCACAGACGAGTGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPAAQTSGSARG*KRRRRRLISTP Trigger: GGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCTGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR GCA 90 bp | GGCCGGGTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSTGSSDEHAGHGDSGTQEAS*TDEWVS Trigger: GCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGT...ACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTACCCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| 3UTR CAA 72 bp | CCTGGGCCTGGTGAGGGCTTCTGCCTGGGAACCGTCTaGGGTGGGCCCAAGGCCCAGCTGCGATGCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGPGEGFCLGTV*GGPKAQLRCIS Trigger: ACTGATGCATCGCAGCTGGGCCTTGGGCCCACCCAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGGGTTGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCCAGGCCCACACCACTTTGGATTCCCCATaGGTCCTGGCAACCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRVEAAKAAADLHSQAHTTLDSP*VLATPD Trigger: ATCCGGGGTTGCCAGGACCCATGGGGAATCCAAAGT...GGTGTGGGCCTGGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR TCA 90 bp | GCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTGAACCCCTGCCACGGTaGAGCGGTCCATGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: APAPQMSTLDTGTRVERPEPLPR*SGPCSS Trigger: TGAACTACATGGACCGCTTCACCGTGGCAGGGGTTC...AGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119754.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTCCCTGCACGTGGAGTTaGGCCCGCCGGCGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSPCTWS*ARRRSS Trigger: AGATGACCGCCGGCGGGCTCAACTCCACGTGCAGGG...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMTQEAS*TDEWVS Trigger: GCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGT...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTCTCCACGGCTCCTCTTaGGGGCTCCTGGACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPLPRFWTPISSLGCPCLHGSS*GLLDHQ Trigger: CTGGTGGTCCAGGAGCCCCCAAGAGGAGCCGTGGAG...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGAGGAAAGGCGCCGAACCCAGGAGGCCAGCTGCACAGACGAGTGGGTCGAACCCCTGCCACGGTaGAGCGGTCCATGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEEERRRTQEASCTDEWVEPLPR*SGPCSS Trigger: TGAACTACATGGACCGCTTCACCGTGGCAGGGGTTC...GACCCACTCGTCTGTGCAGCTGGCCTCCTGGGTTCGGCGCCTTTCCTCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGTGAACCTGAGTGGCGCTCCACGGCTCCTCTTGGGGGCTCCTGGACCATGGTCTCTCTGGGGATaGAGGATGATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVVNLSGAPRLLLGAPGPWSLWG*RMIPVS Trigger: TGACACTGGGATCATCCTTCATCCCCAGAGAGACCA...TGGTCCAGGAGCCCCCAAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205366.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTGCAGAGCCCGGAACTCGGACAGGAAGGAAGGGGGCCAGCTCCGTCGGGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ENCRARNSDRKEGGQLRRVIRII*LAEEGR Trigger: GCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGAC...CCGACGGAGCTGGCCCCCTTCCTTCCTGTCCGAGTTCCGGGCTCTGCAGTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTACCGACTCCGCTGGTCTaGCACGAAGAGGTCGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVPTPLV*HEEVGD Trigger: ATCGCCGACCTCTTCGTGGCAGACCAGCGGAGTCGG...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGGCCGCACCACCCAGTaGCCCAACGAAAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHGRTTQ*PNESTE Trigger: CTCTGTGCTTTCGTTGGGGCACTGGGTGGTGCGGCC...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTTCTTGGACCTGGGCCTGGTGAGGGCTTCTGCCTGGGAACCGTCTTGTCAGGGTGGGCGCAATaGTGGAGTAACTGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFLLGPGPGEGFCLGTVLSGWAQ*WSNWPP Trigger: GGGAGGCCAGTTACTCCACCATTGCGCCCACCCTGA...CAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTCTCCACGGCTCCTCTTaGGGGCTCCTGGACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSLHGSS*GLLDHQ Trigger: CTGGTGGTCCAGGAGCCCCCAAGAGGAGCCGTGGAG...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGGTGGTGAACCTGAGTaGCGCTCCACGGCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTGSSDEHAGHGDSGRTGGEPE*RSTAPL Trigger: AAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC...CGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| CDS-3UTR TCA 90 bp | ACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGGCCTCGCAATGCCCCCGCACATaGGGTACTTTCGATTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSDEHAGHGDSGRTASQCPRT*GTFDCT Trigger: GGTACAATCGAAAGTACCTCATGTGCGGGGGCATTG...CGAGGCCGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119754.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCGAGGGTTGAAGCGGCGAAGGCGGCGGCTGATCTCCACTCCCAGGCCGTAGCCAAACACTGGTaGCAACACCATGTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPRVEAAKAAADLHSQAVAKHW*QHHVTG Trigger: TCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTAC...GGCCTGGGAGTGGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTCCGACTCCGCTGGTCTaGCACGAAGAGGTCGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSPTPLV*HEEVGD Trigger: ATCGCCGACCTCTTCGTGGCAGACCAGCGGAGTCGG...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVTRRAQ*QSPATS Trigger: AGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGT...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPRFWTPISSLGCPCSVTRRAQ*QSPATS Trigger: AGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGT...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGTATAGGTGGCCACGATaGTACCTCGGGCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTGSSDEHAGHGDSGRTYRWPR*YLGHRP Trigger: TGGCCTGTGCCCGAGGTAGCATCGTGGCCACCTATA...CGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTATAGGTGGCCACGATaGTACCTCGGGCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMYRWPR*YLGHRP Trigger: TGGCCTGTGCCCGAGGTAGCATCGTGGCCACCTATA...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGAGCATGAGCGAGAACTaGAGAGCCCGGAACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMSMSEN*RARNSD Trigger: GTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCT...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTGGCCGCACCACCCAGTaGCCCAACGAAAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSGRTTQ*PNESTE Trigger: CTCTGTGCTTTCGTTGGGGCACTGGGTGGTGCGGCC...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTCAGGGTGGGCGCAATaGTGGAGTAACTGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPRFWTPISSLGCPCSVSGWAQ*WSNWPP Trigger: GGGAGGCCAGTTACTCCACCATTGCGCCCACCCTGA...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCAGGACAGCCAGCACTCCTAGACCTGGTGTCACCCGTAGAGCCCAGTGAACCCCTGCCACGGTaGAGCGGTCCATGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAAGQPALLDLVSPVEPSEPLPR*SGPCSS Trigger: TGAACTACATGGACCGCTTCACCGTGGCAGGGGTTC...ACTGGGCTCTACGGGTGACACCAGGTCTAGGAGTGCTGGCTGTCCTGCTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR TCA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGGTCAGAGGAAGAGCATaGATCTCCAGGGAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMVRGRA*ISRETG Trigger: CCCTGTCTCCCTGGAGATTCATGCTCTTCCTCTGAC...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGACTTTGGATTCCCCATaGGTCCTGGCAACCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDTPSPFLDSHLFPGLPMTLDSP*VLATPD Trigger: ATCCGGGGTTGCCAGGACCCATGGGGAATCCAAAGT...CATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGGTGGTGAACCTGAGTaGCGCTCCACGGCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSGGEPE*RSTAPL Trigger: AAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAAGCTGCACAGACGAGTaGGTCAGCCCGAGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVSCTDE*VSPRVE Trigger: TTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCT...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGACTCGGGTAGAACGCGTGGACCGTCGAGTTaGGATCACCACGTACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGSSDEHAGHGDSGRTRGPSS*DHHVQQ Trigger: CTGTTGTACGTGGTGATCCCAACTCGACGGTCCACG...CGTTCTACCCGAGTCCCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| CDS-3UTR TCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGAACCCCTGCCACGGTaGAGCGGTCCATGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSEPLPR*SGPCSS Trigger: TGAACTACATGGACCGCTTCACCGTGGCAGGGGTTC...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTCGAAAGCACAGAGCATaGGCGAGAACTGCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSRKHRA*ARTAEP Trigger: GGGCTCTGCAGTTCTCGCTCATGCTCTGTGCTTTCG...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTGGCGGTCATCTTCAATaGACATGGCGGTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSGGHLQ*TWRCPG Trigger: TCCTGGGCACCGCCATGTTCATTGAAGATGACCGCC...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTCCCTGCACGTGGAGTTaGGCCCGCCGGCGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPPCTWS*ARRRSS Trigger: AGATGACCGCCGGCGGGCTCAACTCCACGTGCAGGG...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTGTAGAACGGCCTCGCTaGGGTACTACAATCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTPLPRFWTPISSLGCPCVERPR*GTTIRS Trigger: TGACCGGATTGTAGTACCTCAGCGAGGCCGTTCTAC...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHVIRII*LAEEGR Trigger: GCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGAC...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | TGGACCACCAGGAACAGCAGCAGGACAGCCAGCACTCCTAGACCTGGTGTCACCGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WTTRNSSRTASTPRPGVTVIRII*LAEEGR Trigger: GCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGAC...GGTGACACCAGGTCTAGGAGTGCTGGCTGTCCTGCTGCTGTTCCTGGTGGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTTCTTGGACCTGGGCCTGGTGAGGGCTTCTGCCTGGGAACCGTCTTGAGGATTTCGTGCCAGTaGCTTCAGATCTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLLGPGPGEGFCLGTVLRISCQ*LQICPP Trigger: TGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCT...CAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 |
||
| CDS-3UTR CCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAACTTTGGATTCCCCATaGGTCCTGGCAACCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVTLDSP*VLATPD Trigger: ATCCGGGGTTGCCAGGACCCATGGGGAATCCAAAGT...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATACTTTGGATTCCCCATaGGTCCTGGCAACCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHTLDSP*VLATPD Trigger: ATCCGGGGTTGCCAGGACCCATGGGGAATCCAAAGT...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTAGCTGCACAGACGAGTaGGTCAGCCCGAGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSSCTDE*VSPRVE Trigger: TTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCT...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATCGTGGACCGTCGAGTTaGGATCACCACGTACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHRGPSS*DHHVQQ Trigger: CTGTTGTACGTGGTGATCCCAACTCGACGGTCCACG...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCCAATGCCCCCGCACATaGGGTACTTTCGATTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PLPRFWTPISSLGCPCSVQCPRT*GTFDCT Trigger: GGTACAATCGAAAGTACCTCATGTGCGGGGGCATTG...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATCAATGCCCCCGCACATaGGGTACTTTCGATTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHQCPRT*GTFDCT Trigger: GGTACAATCGAAAGTACCTCATGTGCGGGGGCATTG...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTTCTGGGGATGAAGGATaGTCCCAGTGTCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSSGDEG*SQCHQG Trigger: TCCCTGGTGACACTGGGATCATCCTTCATCCCCAGA...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTGGGATCACCACGTATCTGGGGATGAAGGATaGTCCCAGTGTCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHYLEGLSRGPSSWDHHVSGDEG*SQCHQG Trigger: TCCCTGGTGACACTGGGATCATCCTTCATCCCCAGA...TACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGAGATTTCGTGCCAGTaGCTTCAGATCTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVEISCQ*LQICPP Trigger: TGGTGGGCAGATCTGAAGGCACTGGCACGAAATCTC...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | AGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTCAATGGCCCAGTTCATaGACAACAGGGTCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPLPRFWTPISSLGCPCQWPSS*TTGSPQ Trigger: TTGGGGAGACCCTGTTGTCCATGAACTGGGCCATTG...ACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATCAATGGCCCAGTTCATaGACAACAGGGTCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGHPFPVSGLPSLPWAAHQWPSS*TTGSPQ Trigger: TTGGGGAGACCCTGTTGTCCATGAACTGGGCCATTG...ATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTCGTGGACCGTCGAGTTaGGATCACCACGTACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSRGPSS*DHHVQQ Trigger: CTGTTGTACGTGGTGATCCCAACTCGACGGTCCACG...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTACAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVQSRRY*ASDSAG Trigger: ACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTG...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTTCTTGGACCTGGGCCTGGTGAGGGCTTCTGCCTGGGAACCGTCTTGAGAAGCAGCCAGAAATaGTCTCTGGGGATGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLGPGPGEGFCLGTVLRSSQK*SLGMKD Trigger: ATCCTTCATCCCCAGAGAGCATTTCTGGCTGCTTCT...CAAGACGGTTCCCAGGCAGAAGCCCTCACCAGGCCCAGGTCCAAGAAGGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| 3UTR CAA 72 bp | GCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTaGGGATCACCACGTACAACAGGATGTCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALSGRPQPWTVE*GSPRTTGCQPQ Trigger: TTGTGGCTGACATCCTGTTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | AAACTAGGATTTCGTGCCAGTGCCTTCAGATCTGCCCACCAAGAGGTGGGGCTCTCTGGGGATGAAGGATaGTCCCAGTGTCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLGFRASAFRSAHQEVGLSGDEG*SQCHQG Trigger: TCCCTGGTGACACTGGGATCATCCTTCATCCCCAGA...GAGCCCCACCTCTTGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCTAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTTGTAACCTAGACCACTaGCCACAGGGATGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFWTPISSLGCPCSCNLDH*PQGWQS Trigger: ACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA...ACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GGACACCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTACAGGTAGCCAAACACTaGTGCCAACACCATGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GHPFPVSGLPSLPWAAHVQVAKH*CQHHVT Trigger: AGTTACATGGTGTTGGCACCAGTGTTTGGCTACCTG...TACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | AAACTAGGATTTCGTGCCAGTGCCTTCAGATCTGCCCACCAAGAGGTGGGGCTCCAATGCCCCCGCACATaGGGTACTTTCGATTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KLGFRASAFRSAHQEVGLQCPRT*GTFDCT Trigger: GGTACAATCGAAAGTACCTCATGTGCGGGGGCATTG...GAGCCCCACCTCTTGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCTAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR TCA 90 bp | CACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTGGGATCACCACGTACAATCATCTCTCTGGGGATaGAGGATGATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HYLEGLSRGPSSWDHHVQSSLWG*RMIPVS Trigger: TGACACTGGGATCATCCTTCATCCCCAGAGAGATGA...TTGTACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTGTAGCCAAACACTGGTaGCAACACCATGTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSVAKHW*QHHVTG Trigger: TCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTAC...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCTAGAAGCAGCCAGAAATaGTCTCTGGGGATGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFPVSGLPSLPWAAHVVSRSSQK*SLGMKD Trigger: ATCCTTCATCCCCAGAGAGCATTTCTGGCTGCTTCT...AGACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTTATAGGTGGCCACGATaGTACCTCGGGCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPYRWPR*YLGHRP Trigger: TGGCCTGTGCCCGAGGTAGCATCGTGGCCACCTATA...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTAGCATGAGCGAGAACTaGAGAGCCCGGAACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPSMSEN*RARNSD Trigger: GTCCGAGTTCCGGGCTCTGCAGTTCTCGCTCATGCT...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTTCTGGGGATGAAGGATaGTCCCAGTGTCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPSGDEG*SQCHQG Trigger: TCCCTGGTGACACTGGGATCATCCTTCATCCCCAGA...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPVIRII*LAEEGR Trigger: GCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGAC...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | CAGGACGAAACTAGGATTTCGTGCCAGTGCCTTCAGATCTGCCCACCAAGAGGTCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDETRISCQCLQICPPRGQSRRY*ASDSAG Trigger: ACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTG...ACCTCTTGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCTAGTTTCGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205366.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCGGCGGTCATCTTCAATaGACATGGCGGTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPLQIAPNPLGCPSREDTGGHLQ*TWRCPG Trigger: TCCTGGGCACCGCCATGTTCATTGAAGATGACCGCC...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPQSRRY*ASDSAG Trigger: ACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTG...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR GCA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTGTAGCCAAACACTGGTaGCAACACCATGTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLQIAPNPLGCPSREDTPVAKHW*QHHVTG Trigger: TCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTAC...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCCCGACTCCGCTGGTCTaGCACGAAGAGGTCGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDYKFYSITNSTKPLGLSPTPLV*HEEVGD Trigger: ATCGCCGACCTCTTCGTGGCAGACCAGCGGAGTCGG...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCTGTAACCTAGACCACTaGCCACAGGGATGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPLQIAPNPLGCPSREDTCNLDH*PQGWQS Trigger: ACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAACCCAGGAGGCCAGCTaGACAGACGAGTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRTQEAS*TDEWVS Trigger: GCTGACCCACTCGTCTGTGCAGCTGGCCTCCTGGGT...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCGTAGCCAAACACTGGTaGCAACACCATGTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPLQIAPNPLGCPSREDTVAKHW*QHHVTG Trigger: TCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTAC...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCAGAAGCAGCCAGAAATaGTCTCTGGGGATGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPLQIAPNPLGCPSREDTRSSQK*SLGMKD Trigger: ATCCTTCATCCCCAGAGAGCATTTCTGGCTGCTTCT...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCACCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDYKFYSITNSTKPLGLSTRRAQ*QSPATS Trigger: AGACGTGGCTGGAGACTGGCACTGGGCTCTACGGGT...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCAGGGTGGGCGCAATaGTGGAGTAACTGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESDYKFYSITNSTKPLGLSGWAQ*WSNWPP Trigger: GGGAGGCCAGTTACTCCACCATTGCGCCCACCCTGA...CAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032994.15 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGGGTGGTGAACCTGAGTaGCGCTCCACGGCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESDYKFYSITNSTKPLGLGGEPE*RSTAPL Trigger: AAGAGGAGCCGTGGAGCGCCACTCAGGTTCACCACC...CAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032994.15 |
||
| CDS-3UTR CCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGAGCTGCACAGACGAGTaGGTCAGCCCGAGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFIPLQIAPNPLGCPSRESCTDE*VSPRVE Trigger: TTCAACCCTCGGGCTGACCCACTCGTCTGTGCAGCT...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAACCCCTGCCACGGTaGAGCGGTCCATGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSREPLPR*SGPCSS Trigger: TGAACTACATGGACCGCTTCACCGTGGCAGGGGTTC...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGTCAGAGGAAGAGCATaGATCTCCAGGGAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFIPLQIAPNPLGCPSREVRGRA*ISRETG Trigger: CCCTGTCTCCCTGGAGATTCATGCTCTTCCTCTGAC...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGACGAAAGCACAGAGCATaGGCGAGAACTGCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRRKHRA*ARTAEP Trigger: GGGCTCTGCAGTTCTCGCTCATGCTCTGTGCTTTCG...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119846.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTCTGGGGATGAAGGATaGTCCCAGTGTCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDYKFYSITNSTKPLGLSSGDEG*SQCHQG Trigger: TCCCTGGTGACACTGGGATCATCCTTCATCCCCAGA...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| CDS-3UTR TCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGACAATGCCCCCGCACATaGGGTACTTTCGATTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRQCPRT*GTFDCT Trigger: GGTACAATCGAAAGTACCTCATGTGCGGGGGCATTG...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGAATGCTCTCTGGGGATaGAGGATGATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFIPLQIAPNPLGCPSRENALWG*RMIPVS Trigger: TGACACTGGGATCATCCTTCATCCCCAGAGAGCATT...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR TCA 90 bp | AATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFIPLQIAPNPLGCPSREQSRRY*ASDSAG Trigger: ACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTG...CTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR GCA 90 bp | AGTCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLITNFIPLQIAPNPLGCVIRII*LAEEGR Trigger: GCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGAC...ACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032994.15 |
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| CDS-3UTR GCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAAGGATTTCGTGCCAGTaGCTTCAGATCTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRRISCQ*LQICPP Trigger: TGGTGGGCAGATCTGAAGGCACTGGCACGAAATCCT...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 |
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| CDS-3UTR CCA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGACAATGGCCCAGTTCATaGACAACAGGGTCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRQWPSS*TTGSPQ Trigger: TTGGGGAGACCCTGTTGTCCATGAACTGGGCCATTG...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR TCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCAATGCTCTCTGGGGATaGAGGATGATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDYKFYSITNSTKPLGLSNALWG*RMIPVS Trigger: TGACACTGGGATCATCCTTCATCCCCAGAGAGCATT...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR GCA 90 bp | GAGTCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTGTAACCTAGACCACTaGCCACAGGGATGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESDYKFYSITNSTKPLGLCNLDH*PQGWQS Trigger: ACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA...CAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032994.15 |
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| CDS-3UTR TCA 90 bp | AGTCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTAATGCTCTCTGGGGATaGAGGATGATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLITNFIPLQIAPNPLGCNALWG*RMIPVS Trigger: TGACACTGGGATCATCCTTCATCCCCAGAGAGCATT...ACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032994.15 |
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| CDS-3UTR GCA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCGTAGCCAAACACTGGTaGCAACACCATGTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDYKFYSITNSTKPLGLSVAKHW*QHHVTG Trigger: TCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTAC...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
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| CDS-3UTR CAA 90 bp | TGCATCAGTGGCCGGGTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CISGRVSTGSSDEHAGHGGSARG*KRRRRR Trigger: CCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCC...CCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTACCCGGCCACTGATGCA 69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPRFWTPISSLGCPCSVGSARG*KRRRRR Trigger: CCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCC...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS CCA 90 bp | CTTTGGATTCCCCATGGGTCCTGGCAACCCCGGATGGCCGGGCGCTaGCCCGTCATCAGGATCATCTGCTTGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LWIPHGSWQPRMAGR*PVIRIICLAEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGACGGGCCAGCGCCCGGCCATCCGGGGTTGCCAGGACCCATGGGGAATCCAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR CAA 90 bp | CAGACGAGTGGGTCAGCCCGAGGGTTGAAGCGGCGAAGGCGGCGGCTGATCTCCATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QTSGSARGLKRRRRRLISIRIIC*AEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGAT...GGAGATCAGCCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCCACTCGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138141.8 ENSMUST00000205366.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCAGTGGCCGGGTAAGCACCGGCTCCTCAGATGAGCACGCTGGACACGGGATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CISGRVSTGSSDEHAGHGIRIIC*AEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGAT...CCCGTGTCCAGCGTGCTCATCTGAGGAGCCGGTGCTTACCCGGCCACTGATGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119754.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCCCCGTTTCTGGACTCCCATCTCTTCCCTGGGCTGCCCATGTAGTGTCATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPRFWTPISSLGCPCSVIRIIC*AEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGAT...GACACTACATGGGCAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACTATCTGGAAGGCCTCAGCCGTGGACCGTCGAGTTGGGATCACCACGTAATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QHYLEGLSRGPSSWDHHVIRIIC*AEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGAT...TACGTGGTGATCCCAACTCGACGGTCCACGGCTGAGGCCTTCCAGATAGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138141.8 |
||
| CDS TCA 90 bp | TGTAACCTAGACCACTGCCCACAGGGATGGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGTCTGCCACGAAGAGGTCGGCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CNLDHCPQGWQSRRY*ASDSAGLPRRGRRS Trigger: TGATCGCCGACCTCTTCGTGGCAGACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTGCCATCCCTGTGGGCAGTGGTCTAGGTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000150476.3 ENSMUST00000205930.2 |
||
| CDS TCA 90 bp | ATCCGGTCATCTGAGGGCCCAGACTCATGCAACAGACTAGACCAATaGGGTAAGGGCTCCCTGCATCTCCTAGCAAGTGGGACAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: IRSSEGPDSCNRLDQ*GKGSLHLLASGTAL Trigger: TAGTGCTGTCCCACTTGCTAGGAGATGCAGGGAGCCCTTACCTCATTGGTCTAGTCTGTTGCATGAGTCTGGGCCCTCAGATGACCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
||
| CDS-3UTR CAA 90 bp | CCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCTATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLQIAPNPLGCPSREDTPIRIIC*AEEGRR Trigger: ACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGAT...AGGGGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCGGGTCAGCCCGAGGGTaGAAGCGGCGAAGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SDYKFYSITNSTKPLGLSGSARG*KRRRRR Trigger: CCGCCGCCTTCGCCGCTTCAACCCTCGGGCTGACCC...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS GCA 90 bp | ACAGTCTGGATGAGGCCAGTACTACCATCTCCGATGTTAAAGAACTaGTCGATGTCTGTAAGAACCCCTGCCACGGTGAAGCGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TVWMRPVLPSPMLKN*SMSVRTPATVKRSM Trigger: CATGGACCGCTTCACCGTGGCAGGGGTTCTTACAGACATCGAGCAGTTCTTTAACATCGGAGATGGTAGTACTGGCCTCATCCAGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000150476.3 ENSMUST00000205366.2 ENSMUST00000205930.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGAGAGGACACCCCGTGGACCGTCGAGTaGGGATCACCACGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: IPLQIAPNPLGCPSREDTPWTVE*GSPRTT Trigger: TGTTGTACGTGGTGATCCCAACTCGACGGTCCACGG...GGTGTCCTCTCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
||
| CDS CCA 90 bp | CATGAGGTACTTTCGATTGTACCTGTCACCCAGGTAGCCAAACACTaGTGCCAACACCATGTAACTGGAGATGAACACAGTCTGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: HEVLSIVPVTQVAKH*CQHHVTGDEHSLDE Trigger: CTCATCCAGACTGTGTTCATCTCCAGTTACATGGTGTTGGCACCAGTGTTTGGCTACCTGGGTGACAGGTACAATCGAAAGTACCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000150476.3 ENSMUST00000205366.2 ENSMUST00000205930.2 |
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| CDS-3UTR CAA 90 bp | TCTGATTACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCCCGTGGACCGTCGAGTaGGGATCACCACGTACAACA | + |
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Preference number: 5 (lower is better) Translates to: SDYKFYSITNSTKPLGLSPWTVE*GSPRTT Trigger: TGTTGTACGTGGTGATCCCAACTCGACGGTCCACGG...GGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGTAATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS-3UTR CAA 90 bp | ACAAATTTTATTCCATTACAAATAGCACCAAACCCCTTGGGCTGTCCTAGTAGACCGTGGACCGTCGAGTaGGGATCACCACGTACAACA | + |
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Preference number: 5 (lower is better) Translates to: TNFIPLQIAPNPLGCPSRPWTVE*GSPRTT Trigger: TGTTGTACGTGGTGATCCCAACTCGACGGTCCACGG...TCTACTAGGACAGCCCAAGGGGTTTGGTGCTATTTGTAATGGAATAAAATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 |
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| CDS GCA 72 bp | CGGATGGCCGGGCGCTGGCCCGTCATCAGGATCATCTaGTTGGCTGAGGAAGGGCGCCGTGTCGGACCCGGC | + |
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Preference number: 6 (lower is better) Translates to: RMAGRWPVIRII*LAEEGRRVGPG Trigger: GCCGGGTCCGACACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGACGGGCCAGCGCCCGGCCATCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| CDS CAA 72 bp | ATGGCCGGGCGCTGGCCCGTCATCAGGATCATCTGCTaGGCTGAGGAAGGGCGCCGTGTCGGACCCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: MAGRWPVIRIIC*AEEGRRVGPGH Trigger: ATGGCCGGGTCCGACACGGCGCCCTTCCTCAGCCAAGCAGATGATCCTGATGACGGGCCAGCGCCCGGCCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| CDS CCA 72 bp | CCCCATGGGTCCTGGCAACCCCGGATGGCCGGGCGCTaGCCCGTCATCAGGATCATCTGCTTGGCTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PHGSWQPRMAGR*PVIRIICLAEE Trigger: TTCCTCAGCCAAGCAGATGATCCTGATGACGGGCCAGCGCCCGGCCATCCGGGGTTGCCAGGACCCATGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000205366.2 |
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| CDS GCA 72 bp | CTCCGTCGGAGGCGGTCAGAGATCCGTAGAGCCCAGTaGCAGTCTCCAGCCACGTCTTTCACTTTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRRRRSEIRRAQ*QSPATSFTLEP Trigger: TGGCTCCAAAGTGAAAGACGTGGCTGGAGACTGGCACTGGGCTCTACGGATCTCTGACCGCCTCCGACGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205930.2 |
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| CDS TCA 72 bp | GTGTCACCAGGGACCAGAAGGCAATGCCCCCGCACATaGGGTACTTTCGATTGTACCTGTCACCCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VSPGTRRQCPRT*GTFDCTCHPGS Trigger: GCTACCTGGGTGACAGGTACAATCGAAAGTACCTCATGTGCGGGGGCATTGCCTTCTGGTCCCTGGTGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000138141.8 ENSMUST00000150476.3 ENSMUST00000205366.2 ENSMUST00000205930.2 |
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| CDS TCA 72 bp | GACCACTGCCCACAGGGATGGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGTCTGCCACGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: DHCPQGWQSRRY*ASDSAGLPRRG Trigger: ACCTCTTCGTGGCAGACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTGCCATCCCTGTGGGCAGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032994.15 ENSMUST00000119754.8 ENSMUST00000119846.8 ENSMUST00000150476.3 ENSMUST00000205930.2 |
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| CDS TCA 72 bp | TCTGAGGGCCCAGACTCATGCAACAGACTAGACCAATaGGGTAAGGGCTCCCTGCATCTCCTAGCAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SEGPDSCNRLDQ*GKGSLHLLASG Trigger: CCCACTTGCTAGGAGATGCAGGGAGCCCTTACCTCATTGGTCTAGTCTGTTGCATGAGTCTGGGCCCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119754.8 |
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| CDS TCA 72 bp | GACCACTGCCCACAGGGATGGCAAAGTAGAAGATACTaGGCATCCGACTCCGCTGGTCTCTCTGGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: DHCPQGWQSRRY*ASDSAGLSGDE Trigger: TTCATCCCCAGAGAGACCAGCGGAGTCGGATGCTCAGTATCTTCTACTTTGCCATCCCTGTGGGCAGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205366.2 |
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