Pregenerated sensors for SPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051457Ensembl transcript IDs: ENSMUST00000049931.6, ENSMUST00000143713.2, ENSMUST00000205483.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCTTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTaGGCTGGCGGGGTCAGAGGCAGCACAATTGTGACCTGTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SSCTSPPATTFGPRA*AGGVRGSTIVTCPL Trigger: GAGGGGACAGGTCACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR GCA 90 bp | AGCTTCCTCTTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTaGCTGGGCTGGCGGGGTCAGAGGCAGCACAATTGTGACCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SFLLHISSSNHLWTT*LGWRGQRQHNCDLS Trigger: GGACAGGTCACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAGGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | TTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTGGGCTaGCGGGGTCAGAGGCAGCACAATTGTGACCTGTCCCCTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LHISSSNHLWTTCLG*RGQRQHNCDLSPLC Trigger: ACAGAGAGGGGACAGGTCACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | GGGACATGCACTGAGTGCTTGCTGCCTGCCAGGCACCGGAGTCACTaGGAAGAGAGATGTGGCCAAGATCCGGGACAAGCGTTCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GTCTECLLPARHRSH*EERCGQDPGQAFSF Trigger: GAAGCTGAACGCTTGTCCCGGATCTTGGCCACATCTCTCTTCCCAGTGACTCCGGTGCCTGGCAGGCAGCAAGCACTCAGTGCATGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | GTGCTTGCTGCCTGCCAGGCACCGGAGTCACTGGGAAGAGAGATGTaGCCAAGATCCGGGACAAGCGTTCAGCTTCCTTGTCTTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: VLAACQAPESLGREM*PRSGTSVQLPCLPS Trigger: TGAAGGAAGACAAGGAAGCTGAACGCTTGTCCCGGATCTTGGCCACATCTCTCTTCCCAGTGACTCCGGTGCCTGGCAGGCAGCAAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | TCCCAGGCTTCATGTCTGGTGCCCTTGAAGGTCGTAAGAGGCCATTaGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: SQASCLVPLKVVRGH*ISWNWSCRQLGAAA Trigger: AGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAGACATGAAGCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| 3UTR CCA 90 bp | TTGGCAAAAACAACCACAACAGTTGCTGTGTCCCTTAAGGGCCACTaGCAACTCACTCGAGCCATCTCTGTTGTAGCTGGCCCACACAGC | + |
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Preference number: 1 (lower is better) Translates to: LAKTTTTVAVSLKGH*QLTRAISVVAGPHS Trigger: GCTGTGTGGGCCAGCTACAACAGAGATGGCTCGAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR TCA 90 bp | ACATCTCTTTCTGTAGGTCAGTCTGTTCTCAAGGGCAGCGCCCTCTaGCTCAACAGCTTCCTCTTGCACATCTCCTCCAGCAACCACCTT | + |
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Preference number: 1 (lower is better) Translates to: TSLSVGQSVLKGSAL*LNSFLLHISSSNHL Trigger: AAGGTGGTTGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGAGAACAGACTGACCTACAGAAAGAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR GCA 90 bp | TACAGCTCCTGGGTCCCTCCTTTTGGAACTCACCAGCACCTGCCCTaGTTTCTCCCATGGTCTATATTCACCAGTACTGTTTGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: YSSWVPPFGTHQHLP*FLPWSIFTSTVCSH Trigger: ATGGCTGCAAACAGTACTGGTGAATATAGACCATGGGAGAAAGCAGGGCAGGTGCTGGTGAGTTCCAAAAGGAGGGACCCAGGAGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | TTTTGTCTGTCATTCCACTTAGCACCCAGAACATCTGACCCTGTCTaGGCTGAGGTCCTGTTGGGTGCTAGCCACCATCTCTACCCCATT | + |
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Preference number: 1 (lower is better) Translates to: FCLSFHLAPRTSDPV*AEVLLGASHHLYPI Trigger: AATGGGGTAGAGATGGTGGCTAGCACCCAACAGGACCTCAGCCCAGACAGGGTCAGATGTTCTGGGTGCTAAGTGGAATGACAGACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR GCA 90 bp | GTCCTATCTTGCACACAAACCATACTTCTGAGTGGACACAGTAGGTaGGGGACTATACCACCTACACCTACACCACCAGCCAGGAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VLSCTQTILLSGHSR*GTIPPTPTPPARNS Trigger: AGAGTTCCTGGCTGGTGGTGTAGGTGTAGGTGGTATAGTCCCGCACCTACTGTGTCCACTCAGAAGTATGGTTTGTGTGCAAGATAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | GCACACTTGATGGCACATTTAGTCCCCATCACATTTGCATTCTTCTaGGGGCTGCAGACACACTTAGGTCTTCAGCAGACAGGGTACAGC | + |
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Preference number: 1 (lower is better) Translates to: AHLMAHLVPITFAFF*GLQTHLGLQQTGYS Trigger: GCTGTACCCTGTCTGCTGAAGACCTAAGTGTGTCTGCAGCCCCCAGAAGAATGCAAATGTGATGGGGACTAAATGTGCCATCAAGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | TACCTCAGACCCTTAGGGACTCTCTGGCAACCATGTCCCACCCCTTaGGCCTGTCTTTCATTTAACTCTCTCTTATTACCCTGCGACAAG | + |
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Preference number: 1 (lower is better) Translates to: YLRPLGTLWQPCPTP*ACLSFNSLLLPCDK Trigger: CTTGTCGCAGGGTAATAAGAGAGAGTTAAATGAAAGACAGGCCCAAGGGGTGGGACATGGTTGCCAGAGAGTCCCTAAGGGTCTGAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR TCA 90 bp | CATCTCTACCCCATTTCCTTGTCTTCCTCCATGCACCTGACAGCCTaGAACACCTTAGAAGTGGCAGTGAAACAAGCCATTGACCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: HLYPISLSSSMHLTA*NTLEVAVKQAIDLS Trigger: TGAGAGGTCAATGGCTTGTTTCACTGCCACTTCTAAGGTGTTTCAGGCTGTCAGGTGCATGGAGGAAGACAAGGAAATGGGGTAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | GTCCCTCCTTTTGGAACTCACCAGCACCTGCCCTGCTTTCTCCCATaGTCTATATTCACCAGTACTGTTTGCAGCCATCACCTAAATTGT | + |
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Preference number: 1 (lower is better) Translates to: VPPFGTHQHLPCFLP*SIFTSTVCSHHLNC Trigger: ACAATTTAGGTGATGGCTGCAAACAGTACTGGTGAATATAGACCATGGGAGAAAGCAGGGCAGGTGCTGGTGAGTTCCAAAAGGAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CCA 90 bp | TCTCTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTTGGGGTaGAAGAGGAAACAGACAACTGAGCCTGTAGAGAAAAGCATCAAC | + |
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Preference number: 1 (lower is better) Translates to: SLLLPCDKGKTSALG*KRKQTTEPVEKSIN Trigger: GTTGATGCTTTTCTCTACAGGCTCAGTTGTCTGTTTCCTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR TCA 90 bp | CCTGACAGCCTGAAACACCTTAGAAGTGGCAGTGAAACAAGCCATTaGCCTCTCAACTTAGCGATATTTTCTTCTGAGCCTGAAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: PDSLKHLRSGSETSH*PLNLAIFSSEPEIR Trigger: CCTGATTTCAGGCTCAGAAGAAAATATCGCTAAGTTGAGAGGTCAATGGCTTGTTTCACTGCCACTTCTAAGGTGTTTCAGGCTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR GCA 90 bp | CACCTGCCCTGCTTTCTCCCATGGTCTATATTCACCAGTACTGTTTaGAGCCATCACCTAAATTGTCCTATCTTGCACACAAACCATACT | + |
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Preference number: 1 (lower is better) Translates to: HLPCFLPWSIFTSTV*SHHLNCPILHTNHT Trigger: AGTATGGTTTGTGTGCAAGATAGGACAATTTAGGTGATGGCTGCAAACAGTACTGGTGAATATAGACCATGGGAGAAAGCAGGGCAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR GCA 90 bp | CTCTGCTCCACTTACATACTTTGCATTACTAGTCTTTGTGTTAAGTaGCTTCCCCTGCTATCTGCCAATGCCTCATTCATTCATCCATCC | + |
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Preference number: 1 (lower is better) Translates to: LCSTYILCITSLCVK*LPLLSANASFIHPS Trigger: GGATGGATGAATGAATGAGGCATTGGCAGATAGCAGGGGAAGGCACTTAACACAAAGACTAGTAATGCAAAGTATGTAAGTGGAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGCAGCGTCACCGCACTTGGCTaGCTCCTCTCCCGATCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PSSVLPSSPQTRGGNDGSVTALG*LLSRSC Trigger: GCAAGATCGGGAGAGGAGTCAGCCAAGTGCGGTGAC...GCTGCCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGCAGCCTGCTGAGAAGGATGTaGGTGCATGGGCTTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: PSSVLPSSPQTRGGNDGSLLRRM*VHGLHS Trigger: GCTGTGAAGCCCATGCACTCACATCCTTCTCAGCAG...GCTGCCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | GAGCCAGAGGGAGACAGGCCAGCAGTTCCAGGTCAGTTGGACATCCCAGGCTTCTCCTGGAACTGGAGCTaGAGACAGTTGGGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: EPEGDRPAVPGQLDIPGFSWNWS*RQLGAA Trigger: GGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGA...GAAGCCTGGGATGTCCAACTGACCTGGAACTGCTGGCCTGTCTCCCTCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTGAGAGCTGGTGTGAGGGAGCCTCTGAGGGAAGGATATGGCAGCTTAGCGAAGTGATGGATCTCTaGCAGGCTCCCACCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RGESWCEGASEGRIWQLSEVMDL*QAPTSS Trigger: GCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTC...GCTAAGCTGCCATATCCTTCCCTCAGAGGCTCCCTCACACCAGCTCTCACCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CAA 90 bp | ATCCCAGGCTTCATGTCTGGTGCCCTTGAAGGTCGTAAGAGGCCATaGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: IPGFMSGALEGRKRP*DLLELELQTVGSCR Trigger: GCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAGACATGAAGCCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGCAGCGCCCTCTGACTCAACAGCTTCCTCTTGCACATCTCCTCCAGCAGAGGCAGCACAATTGTaGCCTGTCCCCTCTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SRAAPSDSTASSCTSPPAEAAQL*PVPSLY Trigger: GTACAGAGAGGGGACAGGTCACAATTGTGCTGCCTC...TGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTGCCCTTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGAGCTGCCGCTTAAGGTaGTGGGAACAGAGCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PGALEGRKRPLDLLELELSCRLR*WEQSLL Trigger: CAACAGGCTCTGTTCCCAGCACCTTAAGCGGCAGCT...CAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205483.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGTGACCTGTCCCCTCTCTGTACCTCAGACCCTTAGGGACTCTCTGGCAACCTGCATGTGTGCCTACTaGTGTGTGCACGGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: IVTCPLSVPQTLRDSLATCMCAY*CVHGVG Trigger: GCCCACACCGTGCACACACCAGTAGGCACACATGCA...GGTTGCCAGAGAGTCCCTAAGGGTCTGAGGTACAGAGAGGGGACAGGTCACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | CCGTATCTGTTACTCACTGGGCTTTCTCTCTCCCGAGCTGAAGGACACCTGTCCGAAATGGGTTCAGTGTaGCCCAGGTGTGCCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PYLLLTGLSLSRAEGHLSEMGSV*PRCAQL Trigger: GAGCTGGGCACACCTGGGCCACACTGAACCCATTTC...GGACAGGTGTCCTTCAGCTCGGGAGAGAGAAAGCCCAGTGAGTAACAGATACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CAA 90 bp | CACTTAGCACCCAGAACATCTGACCCTGTCTGGGCTGAGGTCCTGTaGGGTGCTAGCCACCATCTCTACCCCATTTCCTTGTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HLAPRTSDPVWAEVL*GASHHLYPISLSSS Trigger: GGAGGAAGACAAGGAAATGGGGTAGAGATGGTGGCTAGCACCCAACAGGACCTCAGCCCAGACAGGGTCAGATGTTCTGGGTGCTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGAGTTTTCTGGCCTGTTaGGATCCCAGAATTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: CAQLSPSLFPTDSRRERWSFLAC*DPRIPR Trigger: CCTTGGAATTCTGGGATCCCAACAGGCCAGAAAACT...CCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGGAAAGACTTCAGCCTTaGGGTGGAAGAGGAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: CAQLSPSLFPTDSRRERWERLQP*GGRGNR Trigger: TCTGTTTCCTCTTCCACCCCAAGGCTGAAGTCTTTC...CCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGCAGCGCCCTCTGACTCAACAGCTTCCTCTTGCACATCTCCTCCAGCAAGCCCCAAATCAGAGTaGTCTGGGAAAAGTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SRAAPSDSTASSCTSPPASPKSE*SGKSHR Trigger: CCTGTGACTTTTCCCAGAGCACTCTGATTTGGGGCT...TGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTGGGCTGGCGGTCTCTCTTATTACCCTaGGACAAGGGAAAGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLHISSSNHLWTTCLGWRSLLLP*DKGKTS Trigger: TGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGA...CCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTTGTGTTACCAGGGCTGGAGCTGCCGCTTAAGGTaGTGGGAACAGAGCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: FCNTSQVPGATGLCYQGWSCRLR*WEQSLL Trigger: CAACAGGCTCTGTTCCCAGCACCTTAAGCGGCAGCT...CCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCGCCCTCTGACTCAACAGCTTCCTCTTGCACATCTCCTCCAGCAACCAGTATGGATGGATGGATaGACGGATTTGGTCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GQRPLTQQLPLAHLLQQPVWMDG*TDLVHK Trigger: TTTGTGGACCAAATCCGTCCATCCATCCATCCATAC...TGGTTGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR TCA 90 bp | CGTGGTGAGAGCTGGTGTGAGGGAGCCTCTGAGGGAAGGATATGGCAGCTTAGCAGATCATCCTCATGGTaGTTCAGCAATTGGTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: RGESWCEGASEGRIWQLSRSSSW*FSNWFQ Trigger: TTGGAACCAATTGCTGAATCACCATGAGGATGATCT...GCTAAGCTGCCATATCCTTCCCTCAGAGGCTCCCTCACACCAGCTCTCACCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGCAGCGCCCTCTGACTCAACAGCTTCCTCTTGCACATCTCCTCCAGCACCCTGCTTTCTCCCATaGTCTATATTCACCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SRAAPSDSTASSCTSPPAPCFLP*SIFTST Trigger: AGTACTGGTGAATATAGACCATGGGAGAAAGCAGGG...TGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CAA 90 bp | ATACATACATACATACATTCATTCATGGGGACATGCACTGAGTGCTaGCTGCCTGCCAGGCACCGGAGTCACTGGGAAGAGAGATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: IHTYIHSFMGTCTEC*LPARHRSHWEERCG Trigger: GCCACATCTCTCTTCCCAGTGACTCCGGTGCCTGGCAGGCAGCAAGCACTCAGTGCATGTCCCCATGAATGAATGTATGTATGTATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | TTGATGGCACATTTAGTCCCCATCACATTTGCATTCTTCTGGGGGCTGCAGACAGAACTCACCAGCACCTaGCCTGCTTTCTCCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: LMAHLVPITFAFFWGLQTELTST*PAFSHG Trigger: ACCATGGGAGAAAGCAGGGCAGGTGCTGGTGAGTTC...TGTCTGCAGCCCCCAGAAGAATGCAAATGTGATGGGGACTAAATGTGCCATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCAAAAACAACCACAACAGTTGCTGTGTCCCTTAAGGGCCACTGGCAACTCAACAGGGTACAGCTCCTaGGTCCCTCCTTTTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: WQKQPQQLLCPLRATGNSTGYSS*VPPFGT Trigger: AGTTCCAAAAGGAGGGACCCAGGAGCTGTACCCTGT...TGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTGCTGTGTCCCTTAAGGGCCACTGGCAACTCACTCGAGCCATCTCTGTTGAGGAAACAGACAACTaGGCCTGTAGAGAAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TVAVSLKGHWQLTRAISVEETDN*ACREKH Trigger: ATGCTTTTCTCTACAGGCTCAGTTGTCTGTTTCCTC...AACAGAGATGGCTCGAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTTGTGTTAAGTGCCTTCCCCTGCTATCTGCCAATGCCTCATTCATTCATACATCTGACCCTGTCTaGGCTGAGGTCCTGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SLCVKCLPLLSANASFIHTSDPV*AEVLLG Trigger: ACCCAACAGGACCTCAGCCCAGACAGGGTCAGATGT...ATGAATGAATGAGGCATTGGCAGATAGCAGGGGAAGGCACTTAACACAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CAA 90 bp | TTTAACTCTCTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTaGGGGTGGAAGAGGAAACAGACAACTGAGCCTGTAGAGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: FNSLLLPCDKGKTSA*GWKRKQTTEPVEKS Trigger: GCTTTTCTCTACAGGCTCAGTTGTCTGTTTCCTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGAGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTTGTGTTAAGTGCCTTCCCCTGCTATCTGCCAATGCCTCATTCATTCATTCATTCATGGGGACATaGACTGAGTGCTTGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLCVKCLPLLSANASFIHSFMGT*TECLLP Trigger: AGGCAGCAAGCACTCAGTGCATGTCCCCATGAATGA...ATGAATGAATGAGGCATTGGCAGATAGCAGGGGAAGGCACTTAACACAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTCATTACACATTTCTGAAGACGAGGCCAGGATGTCACAAACACAAGCTATGCCATGTCCCACCCCTTaGGCCTGTCTTTCATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: RSLHISEDEARMSQTQAMPCPTP*ACLSFN Trigger: GTTAAATGAAAGACAGGCCCAAGGGGTGGGACATGG...CATAGCTTGTGTTTGTGACATCCTGGCCTCGTCTTCAGAAATGTGTAATGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR CAA 90 bp | AACTTAGCGATATTTTCTTCTGAGCCTGAAATCAGGACACACAGTTaGGCAAAAACAACCACAACAGTTGCTGTGTCCCTTAAGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: NLAIFSSEPEIRTHS*AKTTTTVAVSLKGH Trigger: GTGGCCCTTAAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCAAACTGTGTGTCCTGATTTCAGGCTCAGAAGAAAATATCGCTAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| 3UTR-3UTR GCA 90 bp | TCTTACAGATGTATTTACAGATCATTTAATTTTCCCGACCCCACGTCAGCCACAAGTCCCCATCACATTTaGATTCTTCTGGGGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SYRCIYRSFNFPDPTSATSPHHI*ILLGAA Trigger: TGCAGCCCCCAGAAGAATGCAAATGTGATGGGGACT...TGTGGCTGACGTGGGGTCGGGAAAATTAAATGATCTGTAAATACATCTGTAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGTCACAAACACAAGCTATGGTTTCATAACTGATGGAGTTGAAACTGTTTTACAAATCAGAGTGCTCTaGGAAAAGTCACAGGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: DVTNTSYGFITDGVETVLQIRVL*EKSQVT Trigger: TGTGACCTGTGACTTTTCCCAGAGCACTCTGATTTG...TAAAACAGTTTCAACTCCATCAGTTATGAAACCATAGCTTGTGTTTGTGACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGTCACAAACACAAGCTATGGTTTCATAACTGATGGAGTTGAAACTGTTTTAACATACATTCATTCATaGGGACATGCACTGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DVTNTSYGFITDGVETVLTYIHS*GHALSA Trigger: AGCACTCAGTGCATGTCCCCATGAATGAATGTATGT...TAAAACAGTTTCAACTCCATCAGTTATGAAACCATAGCTTGTGTTTGTGACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TCCTCCAGCAACCACCTTTGGACCACGTGCCTGGGCTaGCGGGGTCAGAGGCAGCACAATTGTGACCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSNHLWTTCLG*RGQRQHNCDLS Trigger: GGACAGGTCACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | AGCTTCCTCTTGCACATCTCCTCCAGCAACCACCTTTaGACCACGTGCCTGGGCTGGCGGGGTCAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFLLHISSSNHL*TTCLGWRGQRQ Trigger: CTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAGGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TCCGCATCCCTAACCCAAGGAGAAGTGATGGATCTCTaGCAGGCTCCCACCAGCAGCTTCCAGCCAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SASLTQGEVMDL*QAPTSSFQPAP Trigger: TGGGGCTGGCTGGAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGGGTTAGGGATGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | ACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTaGGCTGGCGGGGTCAGAGGCAGCACAATTGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: TSPPATTFGPRA*AGGVRGSTIVT Trigger: GGTCACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCTTTGGACCACGTGCCTGGGCTGGCGGGGTCAGAGGCAGCACAATTGTGACTCCTCTCCCGATCTaGCATGTGTGCCTACTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTFGPRAWAGGVRGSTIVTPLPI*HVCLLV Trigger: CACCAGTAGGCACACATGCAAGATCGGGAGAGGAGT...CACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTaGCTGGGCTGGCGGGGTCAGAGGCAGCACAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHISSSNHLWTT*LGWRGQRQHNC Trigger: ACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | GCCTGCCAGGCACCGGAGTCACTGGGAAGAGAGATGTaGCCAAGATCCGGGACAAGCGTTCAGCTTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ACQAPESLGREM*PRSGTSVQLPC Trigger: ACAAGGAAGCTGAACGCTTGTCCCGGATCTTGGCCACATCTCTCTTCCCAGTGACTCCGGTGCCTGGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | GTGAGCAGTAGAAATGGGTTCAGTGTGGCCCAGGTGTaGCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSRNGFSVAQV*PAQSFPLPHRL Trigger: GAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGGCACACCTGGGCCACACTGAACCCATTTCTACTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TCAGCAGACAGGGTACAGCTCCTGGGTCCCTCCTTTTaGAACTCACCAGCACCTGCCCTGCTTTCTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SADRVQLLGPSF*NSPAPALLSPM Trigger: CATGGGAGAAAGCAGGGCAGGTGCTGGTGAGTTCCAAAAGGAGGGACCCAGGAGCTGTACCCTGTCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | AGCCAGAGGGAGACAGGCCAGCAGTTCCAGGTCAGTTaGACATCCCAGGCTTCATGTCTGGTGCCCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQRETGQQFQVS*TSQASCLVPLK Trigger: CTTCAAGGGCACCAGACATGAAGCCTGGGATGTCCAACTGACCTGGAACTGCTGGCCTGTCTCCCTCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR TCA 72 bp | GAGGCATTCCTGAAGGGGCCCCTGCTGAGAAGGATGTaGGTGCATGGGCTTCACAGCTTCATCCTAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EAFLKGPLLRRM*VHGLHSFILGS Trigger: ACTCCCTAGGATGAAGCTGTGAAGCCCATGCACTCACATCCTTCTCAGCAGGGGCCCCTTCAGGAATGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | CCACTGGCAACTCACTCGAGCCATCTCTGTTGTAGCTaGCCCACACAGCGCCTAGTGAGCAGTAGAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLATHSSHLCCS*PTQRLVSSRNG Trigger: CCCATTTCTACTGCTCACTAGGCGCTGTGTGGGCCAGCTACAACAGAGATGGCTCGAGTGAGTTGCCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | TCTGTAGGTCAGTCTGTTCTCAAGGGCAGCGCCCTCTaGCTCAACAGCTTCCTCTTGCACATCTCCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVGQSVLKGSAL*LNSFLLHISSS Trigger: GCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGAGAACAGACTGACCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | GGGATTAAAGGCAGGTGCCCCCACCACCTGGCTGGCTaGGCCATCTTTCAGCCCTGTGACTATTTAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GIKGRCPHHLAG*AIFQPCDYLAV Trigger: AACAGCTAAATAGTCACAGGGCTGAAAGATGGCTCAGCCAGCCAGGTGGTGGGGGCACCTGCCTTTAATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR CCA 72 bp | CCAGCAGCTTCCAGCCAGCCCCAAATCAGAGTGCTCTaGGAAAAGTCACAGGTCACAGTTCACCCAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PAASSQPQIRVL*EKSQVTVHPRA Trigger: TGCTCTTGGGTGAACTGTGACCTGTGACTTTTCCCAGAGCACTCTGATTTGGGGCTGGCTGGAAGCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | CCAGAACATCTGACCCTGTCTGGGCTGAGGTCCTGTTaGGTGCTAGCCACCATCTCTACCCCATTTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PEHLTLSGLRSC*VLATISTPFPC Trigger: ACAAGGAAATGGGGTAGAGATGGTGGCTAGCACCCAACAGGACCTCAGCCCAGACAGGGTCAGATGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TCATTCCACTTAGCACCCAGAACATCTGACCCTGTCTaGGCTGAGGTCCTGTTGGGTGCTAGCCACCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFHLAPRTSDPV*AEVLLGASHHL Trigger: GAGATGGTGGCTAGCACCCAACAGGACCTCAGCCCAGACAGGGTCAGATGTTCTGGGTGCTAAGTGGAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGTATCTGTTACTCACTGGGCTTTCTCTCTCCCGAGCTGAAGGACACCTGTCCCTCTACCCCATTTCCTaGTCTTCCTCCATGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: PYLLLTGLSLSRAEGHLSLYPIS*SSSMHL Trigger: CAGGTGCATGGAGGAAGACAAGGAAATGGGGTAGAG...GGACAGGTGTCCTTCAGCTCGGGAGAGAGAAAGCCCAGTGAGTAACAGATACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | CTTCCCCACAGACTCGAGGAGGGAACGATGGCAGCTTaGTGTGGTAGCAACTGGTCCATGTCCCTTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LPHRLEEGTMAA*CGSNWSMSLSI Trigger: AATGGAAAGGGACATGGACCAGTTGCTACCACATCAAGCTGCCATCGTTCCCTCCTCGAGTCTGTGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | CACAGGTCACAGTTCACCCAAGAGCAAGCTGGATGTTaGCATCCAGGCTCTAAGCTGGCCCCAAAGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HRSQFTQEQAGC*HPGSKLAPKQM Trigger: CATTTGCTTTGGGGCCAGCTTAGAGCCTGGATGGCAACATCCAGCTTGCTCTTGGGTGAACTGTGACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TACATTCATTCATGGGGACATGCACTGAGTGCTTGCTaGCTGCCAGGCACCGGAGTCACTGGGAAGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: YIHSWGHALSAC*LPGTGVTGKRD Trigger: ATCTCTCTTCCCAGTGACTCCGGTGCCTGGCAGGCAGCAAGCACTCAGTGCATGTCCCCATGAATGAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | ACAACCACAACAGTTGCTGTGTCCCTTAAGGGCCACTaGCAACTCACTCGAGCCATCTCTGTTGTAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TTTTVAVSLKGH*QLTRAISVVAG Trigger: GCCAGCTACAACAGAGATGGCTCGAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGTTGTGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TCATGTCTGGTGCCCTTGAAGGTCGTAAGAGGCCATTaGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCLVPLKVVRGH*ISWNWSCRQLG Trigger: TCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAGACATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR CCA 72 bp | GAATACCTGGTGCCCTTGAAGGTCGTAAGAGGCCATTaGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EYLVPLKVVRGH*ISWNWSCRQLG Trigger: TCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAGGTATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205483.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTGACCTGTCCCCTCTCTGTACCTCAGACCCTTAGGGACTCTCTGGCAACCGAGTTTTCTGGCCTGTaGGGATCCCAGAATTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IVTCPLSVPQTLRDSLATEFSGL*GSQNSK Trigger: CTTGGAATTCTGGGATCCCAACAGGCCAGAAAACTC...GGTTGCCAGAGAGTCCCTAAGGGTCTGAGGTACAGAGAGGGGACAGGTCACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TGCACACAAACCATACTTCTGAGTGGACACAGTAGGTaGGGGACTATACCACCTACACCTACACCACCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CTQTILLSGHSR*GTIPPTPTPPA Trigger: GGCTGGTGGTGTAGGTGTAGGTGGTATAGTCCCGCACCTACTGTGTCCACTCAGAAGTATGGTTTGTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTCCCCTCTCTGTACCTCAGACCCTTAGGGACTCTCTGGCAACCATGTCCATGGTGATTCAGCAATaGGTTCCAAAGAAAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TCPLSVPQTLRDSLATMSMVIQQ*VPKKAQ Trigger: CTGTGCTTTCTTTGGAACCAATTGCTGAATCACCAT...GGACATGGTTGCCAGAGAGTCCCTAAGGGTCTGAGGTACAGAGAGGGGACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TGGGTCCCTCCTTTTGGAACTCACCAGCACCTGCCCTaGTTTCTCCCATGGTCTATATTCACCAGTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WVPPFGTHQHLP*FLPWSIFTSTV Trigger: AACAGTACTGGTGAATATAGACCATGGGAGAAAGCAGGGCAGGTGCTGGTGAGTTCCAAAAGGAGGGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | CCCTTAGGGACTCTCTGGCAACCATGTCCCACCCCTTaGGCCTGTCTTTCATTTAACTCTCTCTTATTACCC | + |
|
Preference number: 3 (lower is better) Translates to: PLGTLWQPCPTP*ACLSFNSLLLP Trigger: GGGTAATAAGAGAGAGTTAAATGAAAGACAGGCCCAAGGGGTGGGACATGGTTGCCAGAGAGTCCCTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | AGGCTGACATTGGAGGAGAGTGAGTCTCAAGACATCTaGGCTAATGGTAAGACCCTGCCTGTCTCAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLTLEESESQDI*ANGKTLPVSNK Trigger: TTTGTTTGAGACAGGCAGGGTCTTACCATTAGCCCAGATGTCTTGAGACTCACTCTCCTCCAATGTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACTTACATACTTTGCATTACTAGTCTTTGTGTTAAGTGCCTTCCCCTGCCTCAACAGCTTCCTCTaGCACATCTCCTCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: APLTYFALLVFVLSAFPCLNSFL*HISSSN Trigger: GTTGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAG...GCAGGGGAAGGCACTTAACACAAAGACTAGTAATGCAAAGTATGTAAGTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGATGTGGCCAAGATCCGGGACAAGCGTTCAGCTTCCTTGTCTTCCTTCAATCAGGACACACAGTTaGGCAAAAACAACCACAACA | + |
|
Preference number: 3 (lower is better) Translates to: REMWPRSGTSVQLPCLPSIRTHS*AKTTTT Trigger: TGTTGTGGTTGTTTTTGCCAAACTGTGTGTCCTGAT...TGAAGGAAGACAAGGAAGCTGAACGCTTGTCCCGGATCTTGGCCACATCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | GGGTATCTTGCCCACATGTATGTATTTGTAACCACATaGATACCTGGTGCCCTTGAAGGTCGTAAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GYLAHMYVFVTT*IPGALEGRKRP Trigger: TGGCCTCTTACGACCTTCAAGGGCACCAGGTATTCATGTGGTTACAAATACATACATGTGGGCAAGATACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205483.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATGGCACATTTAGTCCCCATCACATTTGCATTCTTCTGGGGGCTGCAGACAATTCACCAGTACTGTTaGCAGCCATCACCTAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: LMAHLVPITFAFFWGLQTIHQYC*QPSPKL Trigger: CAATTTAGGTGATGGCTGCAAACAGTACTGGTGAAT...TGTCTGCAGCCCCCAGAAGAATGCAAATGTGATGGGGACTAAATGTGCCATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | GGGGAAAATGTGGGTCCACTAAGATCATCCTCATGGTaGTTCAGCAATTGGTTCCAAAGAAAGCACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GENVGPLRSSSW*FSNWFQRKHRG Trigger: TCCTCTGTGCTTTCTTTGGAACCAATTGCTGAATCACCATGAGGATGATCTTAGTGGACCCACATTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | CCTAAATTGTCCTATCTTGCACACAAACCATACTTCTaGGTGGACACAGTAGGTGCGGGACTATACCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: PKLSYLAHKPYF*VDTVGAGLYHL Trigger: TAGGTGGTATAGTCCCGCACCTACTGTGTCCACTCAGAAGTATGGTTTGTGTGCAAGATAGGACAATTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR TCA 72 bp | TCAGCCACAGGCATTTCTGAGGTCATTACACATTTCTaGAGACGAGGCCAGGATGTCACAAACACAAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SATGISEVITHF*RRGQDVTNTSY Trigger: ATAGCTTGTGTTTGTGACATCCTGGCCTCGTCTTCAGAAATGTGTAATGACCTCAGAAATGCCTGTGGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TGTGTCCACCATGATCTCTGCTCCACTTACATACTTTaGATTACTAGTCTTTGTGTTAAGTGCCTTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVHHDLCSTYIL*ITSLCVKCLPL Trigger: CAGGGGAAGGCACTTAACACAAAGACTAGTAATGCAAAGTATGTAAGTGGAGCAGAGATCATGGTGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCATTACACATTTCTGAAGACGAGGCCAGGATGTCACAAACACAAGCTATGAACCACTTCCTAGTTTaGTTCCTCTTGTGGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: RSLHISEDEARMSQTQAMNHFLV*FLLWTL Trigger: AAGTGTCCACAAGAGGAACAAAACTAGGAAGTGGTT...CATAGCTTGTGTTTGTGACATCCTGGCCTCGTCTTCAGAAATGTGTAATGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR GCA 72 bp | TGCTTTCTCCCATGGTCTATATTCACCAGTACTGTTTaGAGCCATCACCTAAATTGTCCTATCTTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: CFLPWSIFTSTV*SHHLNCPILHT Trigger: TGTGTGCAAGATAGGACAATTTAGGTGATGGCTGCAAACAGTACTGGTGAATATAGACCATGGGAGAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CCA 72 bp | TATTTTCTTCTGAGCCTGAAATCAGGACACACAGTTTaGCAAAAACAACCACAACAGTTGCTGTGTCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YFLLSLKSGHTV*QKQPQQLLCPL Trigger: TAAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCAAACTGTGTGTCCTGATTTCAGGCTCAGAAGAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGCAAAATAGAATAAAAATTTGTCCAGGCATAGCTGAATACTCCTGTACTCTTAGAAGGCTGACATaGGAGGAGAGTGAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PVQNRIKICPGIAEYSCTLRRLT*EESESQ Trigger: TTGAGACTCACTCTCCTCCAATGTCAGCCTTCTAAG...AGTACAGGAGTATTCAGCTATGCCTGGACAAATTTTTATTCTATTTTGCACTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR TCA 72 bp | GTATCTGAGTGGACAGGCAAGTTAATCATTCTGATGTaGTTACTCAGCGTTGTGCATATACTGATATCAATG | + |
|
Preference number: 3 (lower is better) Translates to: VSEWTGKLIILM*LLSVVHILISM Trigger: CATTGATATCAGTATATGCACAACGCTGAGTAATCACATCAGAATGATTAACTTGCCTGTCCACTCAGATAC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTGGGCTGGCGGACTGGGATTGTGGTCTaGCCCCAGGGGCTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHISSSNHLWTTCLGWRTGIVV*PQGLMV Trigger: GACCATCAGCCCCTGGGGGCAGACCACAATCCCAGT...CCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CAA 72 bp | CAGCTTCCTCTTGCACATCTCCTCCAGCAACCACCTTaGGACCACGTGCCTGGGCTGGCGGGGTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPLAHLLQQPP*DHVPGLAGSEA Trigger: TGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAGGAAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGACCTCAGAGCCCTTGTTaGCCCCTGCCCCTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGTGAADSWELPLKVLGPQSPC*PLPLMW Trigger: CCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGG...TCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR GCA 90 bp | GAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAACAGAGCGTGAGCGTGGGTCTCTaGCCGGAGCCTTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELELQTVGSCRLRCWEQSVSVGL*PEPSVS Trigger: GGAGACAGAAGGCTCCGGGCAGAGACCCACGCTCAC...GCTCTGTTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCCCTTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCATCAGGAACCCGGGCTaGCCCAGCCCAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVPLKVVRGHWISWNWSCIRNPG*PSPGIH Trigger: GTGGATGCCTGGGCTGGGCCAGCCCGGGTTCCTGAT...GCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAGCTCAGGTACAGGGGTaGTCATGCTGGCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGTGAADSWELPLKVLGAQVQG*SCWHQQ Trigger: CTGCTGGTGCCAGCATGAGCACCCCTGTACCTGAGC...TCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGCAGCCTCCACAGAACTGGTTaGTGTGGTAGCAGGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSSVLPSSPQTRGGNDGSLHRTG*CGSRES Trigger: GGACTCCCTGCTACCACAGCAACCAGTTCTGTGGAG...GCTGCCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTAACCCAAGGAGAAGTGATGGATCTCTGGCAGGCTCCCACCAGCAGCTTCCCTCAGAGCCCTTGTTaGCCCCTGCCCCTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTQGEVMDLWQAPTSSFPQSPC*PLPLMW Trigger: CCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGG...GAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGGGTTAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | GGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCCCTCAGAGCCCTTGTTaGCCCCTGCCCCTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKRPLDLLELELQTVGSPQSPC*PLPLMW Trigger: CCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGG...GCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGCAGCGGGGGTCAAAGAAACTaGGATTGTGGTCTGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSVLPSSPQTRGGNDGSGGQRN*DCGLPP Trigger: TGGGGGCAGACCACAATCCCAGTTTCTTTGACCCCC...GCTGCCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | CCGTATCTGTTACTCACTGGGCTTTCTCTCTCCCGAGCTGAAGGACACCTGTCCGTGAGCGTGGGTCTCTaGCCGGAGCCTTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYLLLTGLSLSRAEGHLSVSVGL*PEPSVS Trigger: GGAGACAGAAGGCTCCGGGCAGAGACCCACGCTCAC...GGACAGGTGTCCTTCAGCTCGGGAGAGAGAAAGCCCAGTGAGTAACAGATACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGCCCCTGATGTGGTTGTaGCCTCTTCATCAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: CAQLSPSLFPTDSRRERWPLMWL*PLHQEP Trigger: GGGTTCCTGATGAAGAGGCCACAACCACATCAGGGG...CCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGCCCCCACCACCTGGCTGGCTGAGCCATCTTTCAGCCCTGTGACTATTCCCCTGATGTGGTTGTaGCCTCTTCATCAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTTWLAEPSFSPVTIPLMWL*PLHQEP Trigger: GGGTTCCTGATGAAGAGGCCACAACCACATCAGGGG...AATAGTCACAGGGCTGAAAGATGGCTCAGCCAGCCAGGTGGTGGGGGCACCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCAGCTCAGTCCTTCCCTCTTCCCCACAGACTCGAGGAGGGAACGATGGGTGCGGCCTCATCTTTaGCTTGTGGACCGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAQLSPSLFPTDSRRERWVRPHL*LVDRQK Trigger: CTTCTGACGGTCCACAAGCCAAAGATGAGGCCGCAC...CCATCGTTCCCTCCTCGAGTCTGTGGGGAAGAGGGAAGGACTGAGCTGGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | GAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGACTGGGATTGTGGTCTaGCCCCAGGGGCTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRKRPLDLLELELQTVGTGIVV*PQGLMV Trigger: GACCATCAGCCCCTGGGGGCAGACCACAATCCCAGT...CCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAGAAGTGATGGATCTCTGGCAGGCTCCCACCAGCAGCTTCCAGCCAGCTGTCACAGGATTGGCTaGAGTGACAGGAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRRSDGSLAGSHQQLPASCHRIG*SDRRVT Trigger: AGTGACCCTCCTGTCACTGCAGCCAATCCTGTGACA...GCTGGCTGGAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTTGGGGTGGAAGAGATCAGGAACCCGGGCTaGCCCAGCCCAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLITLRQGKDFSLGVEEIRNPG*PSPGIH Trigger: GTGGATGCCTGGGCTGGGCCAGCCCGGGTTCCTGAT...CTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAAGTGCGGCCTCATCTTTaGCTTGTGGACCGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLELELQTVGSCRLRCWEVRPHL*LVDRQK Trigger: CTTCTGACGGTCCACAAGCCAAAGATGAGGCCGCAC...TTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| 3UTR CAA 72 bp | GAGCCAGAGGGAGACAGGCCAGCAGTTCCAGGTCAGTaGGACATCCCAGGCTTCATGTCTGGTGCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPEGDRPAVPGQ*DIPGFMSGALE Trigger: TTCAAGGGCACCAGACATGAAGCCTGGGATGTCCAACTGACCTGGAACTGCTGGCCTGTCTCCCTCTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGGGAGACAGGCCAGCAGTTCCAGGTCAGTTGGACATCCCAGGCTTCATTGTTGTCACAGTGGTaGGGGGTGCACTGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQRETGQQFQVSWTSQASLLSQW*GVHWFL Trigger: AAGGAACCAGTGCACCCCCCACCACTGTGACAACAA...TGAAGCCTGGGATGTCCAACTGACCTGGAACTGCTGGCCTGTCTCCCTCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | CCGTATCTGTTACTCACTGGGCTTTCTCTCTCCCGAGCTGAAGGACACCTGTCCTGCCACGGGCCACACTaGAACTCTCCACAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYLLLTGLSLSRAEGHLSCHGPH*NSPQNW Trigger: CCAGTTCTGTGGAGAGTTCCAGTGTGGCCCGTGGCA...GGACAGGTGTCCTTCAGCTCGGGAGAGAGAAAGCCCAGTGAGTAACAGATACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | GGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCCCCCTGATGTGGTTGTaGCCTCTTCATCAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GRKRPLDLLELELQTVGSPLMWL*PLHQEP Trigger: GGGTTCCTGATGAAGAGGCCACAACCACATCAGGGG...GCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAACAGAGCAGTACTAAAGAGCCCTaGCGAGACTTCCGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELELQTVGSCRLRCWEQSSTKEP*RDFRLL Trigger: CAGCAGACGGAAGTCTCGCCAGGGCTCTTTAGTACT...GCTCTGTTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGCCCCCACCACCTGGCTGGCTGAGCCATCTTTCAGCCCTGTGACTATTTTCTGGAAGCAGTGCTaGTGTCTTGCTGGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTTWLAEPSFSPVTIFWKQC*CLAGNF Trigger: GAAGTTTCCAGCAAGACATCAGCACTGCTTCCAGAA...AATAGTCACAGGGCTGAAAGATGGCTCAGCCAGCCAGGTGGTGGGGGCACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGACAGGCCAGCAGTTCCAGGTCAGTTGGACATCCCAGGCTTCATGTCTGGATGGGCTGGCATTCTaGGCTTCAGAGGTACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RETGQQFQVSWTSQASCLDGLAF*ASEVLG Trigger: TCCAAGTACCTCTGAAGCCCAGAATGCCAGCCCATC...CAGACATGAAGCCTGGGATGTCCAACTGACCTGGAACTGCTGGCCTGTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTTGTGTTACCAGGGCTGGCTGCCACGGGCCACACTaGAACTCTCCACAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTLPKFQEQQACVTRAGCHGPH*NSPQNW Trigger: CCAGTTCTGTGGAGAGTTCCAGTGTGGCCCGTGGCA...GCCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGGGTGCGGCCTCATCTTTaGCTTGTGGACCGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGRKRPLDLLELELQTVGVRPHL*LVDRQK Trigger: CTTCTGACGGTCCACAAGCCAAAGATGAGGCCGCAC...CCCAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTCAGGATTGGCTGCAGTaGCAGGAGGGTCACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LEGRKRPLDLLELELQTVQDWLQ*QEGHWL Trigger: TAGCCAGTGACCCTCCTGTCACTGCAGCCAATCCTG...AACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTAACCCAAGGAGAAGTGATGGATCTCTGGCAGGCTCCCACCAGCAGCTTCGCAGTGCTGATGTCTTaGTGGAAACTTCCTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTQGEVMDLWQAPTSSFAVLMS*WKLPER Trigger: CCTCTCAGGAAGTTTCCAGCAAGACATCAGCACTGC...GAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGGGTTAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACAGGTTCTCATGTAGCCCAGGATGGCCTCAAGCTCCTGACCCTTCTGCTCCACAGAACTGGTTaGTGTGGTAGCAGGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IETGSHVAQDGLKLLTLLLHRTG*CGSRES Trigger: GGACTCCCTGCTACCACAGCAACCAGTTCTGTGGAG...CAGAAGGGTCAGGAGCTTGAGGCCATCCTGGGCTACATGAGAACCTGTCTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| 3UTR CAA 72 bp | TACATACATTCATTCATGGGGACATGCACTGAGTGCTaGCTGCCTGCCAGGCACCGGAGTCACTGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YIHSFMGTCTEC*LPARHRSHWEE Trigger: CTCTTCCCAGTGACTCCGGTGCCTGGCAGGCAGCAAGCACTCAGTGCATGTCCCCATGAATGAATGTATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR TCA 90 bp | TGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTTGTGTTACCAGGGCTGGCTCTTGCTGGAAACTTCCTaGGAGGCAGTAGGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CNTSQVPGATGLCYQGWLLLETS*EAVGSG Trigger: ACCTGAGCCTACTGCCTCTCAGGAAGTTTCCAGCAA...GAGCCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGGGCAGCGCCCTCTGACTCAACAGCTTCCTCTTGCACATCTCCTCCAGCATTCTGGAAGCAGTGCTaGTGTCTTGCTGGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAAPSDSTASSCTSPPAFWKQC*CLAGNF Trigger: GAAGTTTCCAGCAAGACATCAGCACTGCTTCCAGAA...TGCTGGAGGAGATGTGCAAGAGGAAGCTGTTGAGTCAGAGGGCGCTGCCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | CACAGTTCACCCAAGAGCAAGCTGGATGTTGCCATCCAGGCTCTAAGCTGGCCCTCGTGGATGTTTTTCTaGTGGAAACTGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSPKSKLDVAIQALSWPSWMFF*WKLRCH Trigger: GTGGCACCTCAGTTTCCAGCAGAAAAACATCCACGA...GGGCCAGCTTAGAGCCTGGATGGCAACATCCAGCTTGCTCTTGGGTGAACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TTCTGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTTGTGTTACCAGGGCTGGGGGGGTCAAAGAAACTaGGATTGTGGTCTGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCNTSQVPGATGLCYQGWGGQRN*DCGLPP Trigger: TGGGGGCAGACCACAATCCCAGTTTCTTTGACCCCC...CCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACAGAA 53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTTGCTGTGTCCCTTAAGGGCCACTGGCAACTCACTCGAGCCATCTCTGTTGTCACTGGCTACATTTaGTGGTTCTGGAAGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVAVSLKGHWQLTRAISVVTGYI*WFWKQC Trigger: GCACTGCTTCCAGAACCATCAAATGTAGCCAGTGAC...AACAGAGATGGCTCGAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | GCCCTTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACATCGTGGATGTTTTTCTaGTGGAAACTGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALEGRKRPLDLLELELQTSWMFF*WKLRCH Trigger: GTGGCACCTCAGTTTCCAGCAGAAAAACATCCACGA...TGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTTGGGGTGGAAGAGTTGTTGTCACAGTGGTaGGGGGTGCACTGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLITLRQGKDFSLGVEELLSQW*GVHWFL Trigger: AAGGAACCAGTGCACCCCCCACCACTGTGACAACAA...CTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TCTGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTTGTGTTACCAGGGCTGGCTGGATGTTTTTCTGCTaGAAACTGAGGTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTLPKFQEQQACVTRAGWMFFC*KLRCHG Trigger: CCCGTGGCACCTCAGTTTCCAGCAGAAAAACATCCA...GCCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGATGTGGCCAAGATCCGGGACAAGCGTTCAGCTTCCTTGTCTTCCTTCAAGTACTAAAGAGCCCTaGCGAGACTTCCGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: REMWPRSGTSVQLPCLPSSTKEP*RDFRLL Trigger: CAGCAGACGGAAGTCTCGCCAGGGCTCTTTAGTACT...TGAAGGAAGACAAGGAAGCTGAACGCTTGTCCCGGATCTTGGCCACATCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGAGTACTAAAGAGCCCTaGCGAGACTTCCGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVVRGHWISWNWSCRQLSTKEP*RDFRLL Trigger: CAGCAGACGGAAGTCTCGCCAGGGCTCTTTAGTACT...CAACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGCTGAAGAACGCACACTTGATGGCACATTTAGTCCCCATCACATTTGCCAGGATTGGCTGCAGTaGCAGGAGGGTCACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLAEERTLDGTFSPHHICQDWLQ*QEGHWL Trigger: TAGCCAGTGACCCTCCTGTCACTGCAGCCAATCCTG...GCAAATGTGATGGGGACTAAATGTGCCATCAAGTGTGCGTTCTTCAGCTAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTGTGTTAAGTGCCTTCCCCTGCTATCTGCCAATGCCTCATTCATTCATGCTCAGGTACAGGGGTaGTCATGCTGGCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCVKCLPLLSANASFIHAQVQG*SCWHQQ Trigger: CTGCTGGTGCCAGCATGAGCACCCCTGTACCTGAGC...ATGAATGAATGAGGCATTGGCAGATAGCAGGGGAAGGCACTTAACACAAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR GCA 90 bp | ACTCATTCTGTAGACCTGGTTGTCCTTGAACTCAGAGAGTTGCCTGTCTCTGCCTGTCACAGGATTGGCTaGAGTGACAGGAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: THSVDLVVLELRELPVSACHRIG*SDRRVT Trigger: AGTGACCCTCCTGTCACTGCAGCCAATCCTGTGACA...GGCAGAGACAGGCAACTCTCTGAGTTCAAGGACAACCAGGTCTACAGAATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCAGCTTAGCTGAAGAACGCACACTTGATGGCACATTTAGTCCCCATCACGATGGGCTGGCATTCTaGGCTTCAGAGGTACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YGSLAEERTLDGTFSPHHDGLAF*ASEVLG Trigger: TCCAAGTACCTCTGAAGCCCAGAATGCCAGCCCATC...GTGATGGGGACTAAATGTGCCATCAAGTGTGCGTTCTTCAGCTAAGCTGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CAA 72 bp | CTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTaGGGGTGGAAGAGGAAACAGACAACTGAGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPCDKGKTSA*GWKRKQTTEPV Trigger: TACAGGCTCAGTTGTCTGTTTCCTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CAA 72 bp | TCAGGACACACAGTTTGGCAAAAACAACCACAACAGTaGCTGTGTCCCTTAAGGGCCACTGGCAACTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SGHTVWQKQPQQ*LCPLRATGNSL Trigger: GAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCAAACTGTGTGTCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTGGAAGAGGAAACAGACAACTGAGCCTGTAGAGAAAAGCATCAACACCTGGATGTTTTTCTGCTaGAAACTGAGGTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWKRKQTTEPVEKSINTWMFFC*KLRCHG Trigger: CCCGTGGCACCTCAGTTTCCAGCAGAAAAACATCCA...GGTGTTGATGCTTTTCTCTACAGGCTCAGTTGTCTGTTTCCTCTTCCACCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTGTGTTAAGTGCCTTCCCCTGCTATCTGCCAATGCCTCATTCATTCATTTGCTGGAAACTTCCTaGGAGGCAGTAGGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCVKCLPLLSANASFIHLLETS*EAVGSG Trigger: ACCTGAGCCTACTGCCTCTCAGGAAGTTTCCAGCAA...ATGAATGAATGAGGCATTGGCAGATAGCAGGGGAAGGCACTTAACACAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CCA 90 bp | TTATTTTTATGCGTATGGGTATCTTGCCCACATGTATGTATTTGTAACCACATGATCAGGAACCCGGGCTaGCCCAGCCCAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLCVWVSCPHVCICNHMIRNPG*PSPGIH Trigger: GTGGATGCCTGGGCTGGGCCAGCCCGGGTTCCTGAT...CATGTGGTTACAAATACATACATGTGGGCAAGATACCCATACGCATAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205483.2 |
||
| CDS-3UTR GCA 90 bp | TACTTATTTTTATGCGTATGGGTATCTTGCCCACATGTATGTATTTGTAACCACGTGAGCGTGGGTCTCTaGCCGGAGCCTTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLFLCVWVSCPHVCICNHVSVGL*PEPSVS Trigger: GGAGACAGAAGGCTCCGGGCAGAGACCCACGCTCAC...GTGGTTACAAATACATACATGTGGGCAAGATACCCATACGCATAAAAATAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205483.2 |
||
| 3UTR CAA 72 bp | TTCTGTAACACTTCCCAAGTTCCAGGAGCAACAGGCTaGTGTTACCAGGGCTGGCTCATGGTTTATGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FCNTSQVPGATG*CYQGWLMVYVL Trigger: TAAAACATAAACCATGAGCCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGGGAAGTGTTACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| CDS-3UTR CCA 90 bp | TCTTACAGATGTATTTACAGATCATTTAATTTTCCCGACCCCACGTCAGCCACAGTGCTGATGTCTTGCTaGAAACTTCCTGAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYRCIYRSFNFPDPTSATVLMSC*KLPERQ Trigger: CTGCCTCTCAGGAAGTTTCCAGCAAGACATCAGCAC...TGTGGCTGACGTGGGGTCGGGAAAATTAAATGATCTGTAAATACATCTGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CAA 72 bp | CTGCTTTCTCCCATGGTCTATATTCACCAGTACTGTTaGCAGCCATCACCTAAATTGTCCTATCTTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPMVYIHQYC*QPSPKLSYLAH Trigger: GTGTGCAAGATAGGACAATTTAGGTGATGGCTGCAAACAGTACTGGTGAATATAGACCATGGGAGAAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| 3UTR CAA 72 bp | ATATTTTCTTCTGAGCCTGAAATCAGGACACACAGTTaGGCAAAAACAACCACAACAGTTGCTGTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFSSEPEIRTHS*AKTTTTVAVSL Trigger: AAGGGACACAGCAACTGTTGTGGTTGTTTTTGCCAAACTGTGTGTCCTGATTTCAGGCTCAGAAGAAAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS CCA 90 bp | CCAGTACCTCAGAGCCCTTGTTGCCCCCTGCCCCTGATGTGGTTGTaGCCTCTTCATCAGGAACCCGGGCTGGCCCAGCCCAGGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPQSPCCPLPLMWL*PLHQEPGLAQPRHP Trigger: TGGATGCCTGGGCTGGGCCAGCCCGGGTTCCTGATGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS-3UTR CAA 90 bp | CCAAGGAGAAGTGATGGATCTCTGGCAGGCTCCCACCAGCAGCTTCCAGCCAGCACCTCAGAGCCCTTGTaGCCCCCTGCCCCTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: PRRSDGSLAGSHQQLPASTSEPL*PPAPDV Trigger: CACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGT...GCTGGCTGGAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| CDS GCA 90 bp | GTCTCTGCCCGGAGCCTTCTGTCTCCAGTACCTCAGAGCCCTTGTTaGCCCCTGCCCCTGATGTGGTTGTGGCCTCTTCATCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: VSARSLLSPVPQSPC*PLPLMWLWPLHQEP Trigger: GGGTTCCTGATGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGGAGACAGAAGGCTCCGGGCAGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS-3UTR CAA 90 bp | GAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAACAGAGCACCTCAGAGCCCTTGTaGCCCCCTGCCCCTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ELELQTVGSCRLRCWEQSTSEPL*PPAPDV Trigger: CACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGT...GCTCTGTTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAGAAGTGATGGATCTCTGGCAGGCTCCCACCAGCAGCTTCCAGCCAGCAGTACCTCAGAGCCCTaGTTGCCCCCTGCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRSDGSLAGSHQQLPASSTSEP*LPPAPD Trigger: ATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACT...GCTGGCTGGAAGCTGCTGGTGGGAGCCTGCCAGAGATCCATCACTTCTCCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAACAGAGCCTGTTGCCGTCTGTCACAGGATaGGCTGCAGTGACAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELQTVGSCRLRCWEQSLLPSVTG*AAVTGG Trigger: CCCTCCTGTCACTGCAGCCAATCCTGTGACAGACGG...CAACAGGCTCTGTTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGGAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAAGTACCTCAGAGCCCTaGTTGCCCCCTGCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPGTGAADSWELPLKVLGSTSEP*LPPAPD Trigger: ATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACT...TCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTCCAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCACATCTCCTCCAGCAACCACCTTTGGACCACGTGCCTGGGCTGGCGGGGCCTCATCTTTGGCTaGTGGACCGTCAGAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHISSSNHLWTTCLGWRGLIFG*WTVRSW Trigger: CCAACTTCTGACGGTCCACAAGCCAAAGATGAGGCC...CCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCTGGAGGAGATGTGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS-3UTR CAA 90 bp | ACCACCTTTGGACCACGTGCCTGGGCTGGCGGGGTCAGAGGCAGCACAATTGTGCACTTGATTCTTGGCTaGGTGACCTGGTGGTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TTFGPRAWAGGVRGSTIVHLILG*VTWWLW Trigger: CCATAACCACCAGGTCACCAAGCCAAGAATCAAGTG...CACAATTGTGCTGCCTCTGACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS CCA 90 bp | TTGGGACCCGACCCAGGCTTCAGCTCTTCTAGTACTAAAGAGCCCTaGCGAGACTTCCGTCTGCTGAAGAACGTAGTGAGCGTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGPDPGFSSSSTKEP*RDFRLLKNVVSVGL Trigger: GAGACCCACGCTCACTACGTTCTTCAGCAGACGGAAGTCTCGCCAGGGCTCTTTAGTACTAGAAGAGCTGAAGCCTGGGTCGGGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTTGCTGTGTCCCTTAAGGGCCACTGGCAACTCACTCGAGCCATCTCTGTTCCGTCTGTCACAGGATaGGCTGCAGTGACAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVAVSLKGHWQLTRAISVPSVTG*AAVTGG Trigger: CCCTCCTGTCACTGCAGCCAATCCTGTGACAGACGG...AACAGAGATGGCTCGAGTGAGTTGCCAGTGGCCCTTAAGGGACACAGCAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
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| CDS CCA 90 bp | AGATTGAGGTGCGGCCTCATCTTTGGCTTGTGGACCGTCAGAAGTTaGGGTTTCCACAGCTTCATCCTCACTGCCCACAAGCGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRCGLIFGLWTVRS*GFHSFILTAHKRLF Trigger: GAAGAGCCGCTTGTGGGCAGTGAGGATGAAGCTGTGGAAACCCCAACTTCTGACGGTCCACAAGCCAAAGATGAGGCCGCACCTCAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGGAGCTGCAGACAGTTGGGAGCTGCCGCTTAAGGTGCTGGGAACAGAGCGGTCACTGGCTACATTaGATGGTTCTGGAAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ELELQTVGSCRLRCWEQSGHWLH*MVLEAV Trigger: CACTGCTTCCAGAACCATCAAATGTAGCCAGTGACC...GCTCTGTTCCCAGCACCTTAAGCGGCAGCTCCCAACTGTCTGCAGCTCCAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| CDS-3UTR CAA 90 bp | ACTCATTCTGTAGACCTGGTTGTCCTTGAACTCAGAGAGTTGCCTGTCTCTGCCACCTCAGAGCCCTTGTaGCCCCCTGCCCCTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: THSVDLVVLELRELPVSATSEPL*PPAPDV Trigger: CACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGT...GGCAGAGACAGGCAACTCTCTGAGTTCAAGGACAACCAGGTCTACAGAATGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAGACAGGTTCTCATGTAGCCCAGGATGGCCTCAAGCTCCTGACCCTTCTGGGCCTCATCTTTGGCTaGTGGACCGTCAGAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IETGSHVAQDGLKLLTLLGLIFG*WTVRSW Trigger: CCAACTTCTGACGGTCCACAAGCCAAAGATGAGGCC...CAGAAGGGTCAGGAGCTTGAGGCCATCCTGGGCTACATGAGAACCTGTCTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143713.2 |
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| CDS TCA 90 bp | TTTGATGGTTCTGGAAGCAGTGCTGATGTCTTGCTGGAAACTTCCTaGGAGGCAGTAGGCTCAGGTACAGGGGTGCTCATGCTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FDGSGSSADVLLETS*EAVGSGTGVLMLAP Trigger: TGGTGCCAGCATGAGCACCCCTGTACCTGAGCCTACTGCCTCTCAGGAAGTTTCCAGCAAGACATCAGCACTGCTTCCAGAACCATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
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| CDS-3UTR CAA 90 bp | CTTGAAGGTCGTAAGAGGCCATTGGATCTCCTGGAACTGGAGCTGCAGACAGTTGGCCTCATCTTTGGCTaGTGGACCGTCAGAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LEGRKRPLDLLELELQTVGLIFG*WTVRSW Trigger: CCAACTTCTGACGGTCCACAAGCCAAAGATGAGGCC...AACTGTCTGCAGCTCCAGTTCCAGGAGATCCAATGGCCTCTTACGACCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTTATTACCCTGCGACAAGGGAAAGACTTCAGCCTTGGGGTGGAAGAGGGTCACTGGCTACATTaGATGGTTCTGGAAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLITLRQGKDFSLGVEEGHWLH*MVLEAV Trigger: CACTGCTTCCAGAACCATCAAATGTAGCCAGTGACC...CTCTTCCACCCCAAGGCTGAAGTCTTTCCCTTGTCGCAGGGTAATAAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049931.6 |
||
| CDS CCA 90 bp | ATGCCACTTGATTCTTGGCTTGGTGACCTGGTGGTTATGGGATCTTaGGTAGACGTCGTGGATGTTTTTCTGCTGGAAACTGAGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MPLDSWLGDLVVMGS*VDVVDVFLLETEVP Trigger: TGGCACCTCAGTTTCCAGCAGAAAAACATCCACGACGTCTACCCAAGATCCCATAACCACCAGGTCACCAAGCCAAGAATCAAGTGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
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| CDS GCA 72 bp | CCTCCGCTCAGGGTCAGGGCCCCAGTCCTCCGCTTTTaGCTCTGGCGCCACAACAGCAGTAGCGCCACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPLRVRAPVLRF*LWRHNSSSATR Trigger: CCTCGTGGCGCTACTGCTGTTGTGGCGCCAGAGGCAAAAGCGGAGGACTGGGGCCCTGACCCTGAGCGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS CCA 72 bp | CTCAGGGTCAGGGCCCCAGTCCTCCGCTTTTGCCTCTaGCGCCACAACAGCAGTAGCGCCACGAGGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRVRAPVLRFCL*RHNSSSATRAK Trigger: TTTGGCCCTCGTGGCGCTACTGCTGTTGTGGCGCCAGAGGCAAAAGCGGAGGACTGGGGCCCTGACCCTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS CCA 72 bp | GTACCTCAGAGCCCTTGTTGCCCCCTGCCCCTGATGTaGTTGTGGCCTCTTCATCAGGAACCCGGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPQSPCCPLPLM*LWPLHQEPGLA Trigger: GGCCAGCCCGGGTTCCTGATGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS CCA 72 bp | ATCGTCGTCCTCTGCAGACTGTCTGGGCTCGCCACCTaGACCCAGCATGCCCCAAAGAGGAGGAGAAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: IVVLCRLSGLAT*TQHAPKRRRRC Trigger: GCACCTTCTCCTCCTCTTTGGGGCATGCTGGGTCCAGGTGGCGAGCCCAGACAGTCTGCAGAGGACGACGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
||
| CDS CAA 72 bp | TGCCCGGAGCCTTCTGTCTCCAGTACCTCAGAGCCCTaGTTGCCCCCTGCCCCTGATGTGGTTGTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPEPSVSSTSEP*LPPAPDVVVAS Trigger: AGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGGAGACAGAAGGCTCCGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS CAA 90 bp | GGTCTCTGCCCGGAGCCTTCTGTCTCCAGTACCTCAGAGCCCTTGTaGCCCCCTGCCCCTGATGTGGTTGTGGCCTCTTCATCAGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GLCPEPSVSSTSEPL*PPAPDVVVASSSGT Trigger: GGTTCCTGATGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGGAGACAGAAGGCTCCGGGCAGAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
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| CDS CAA 72 bp | CCGGAGCCTTCTGTCTCCAGTACCTCAGAGCCCTTGTaGCCCCCTGCCCCTGATGTGGTTGTGGCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PEPSVSSTSEPL*PPAPDVVVASS Trigger: TGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGGAGACAGAAGGCTCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS GCA 72 bp | CGGAGCCTTCTGTCTCCAGTACCTCAGAGCCCTTGTTaGCCCCTGCCCCTGATGTGGTTGTGGCCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSLLSPVPQSPC*PLPLMWLWPLH Trigger: ATGAAGAGGCCACAACCACATCAGGGGCAGGGGGCAACAAGGGCTCTGAGGTACTGGAGACAGAAGGCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS GCA 72 bp | TTCCGTCTGCTGAAGAACGTAGTGAGCGTGGGTCTCTaGCCGGAGCCTTCTGTCTCCAGTACCTCAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FRLLKNVVSVGL*PEPSVSSTSEP Trigger: GGGCTCTGAGGTACTGGAGACAGAAGGCTCCGGGCAGAGACCCACGCTCACTACGTTCTTCAGCAGACGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS CCA 72 bp | CACTGCCCACAAGCGGCTCTTCCTCCCCCTTCAGGTTaGGACCCGACCCAGGCTTCAGCTCTTCTAGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: HCPQAALPPPSG*DPTQASALLVL Trigger: TAGTACTAGAAGAGCTGAAGCCTGGGTCGGGTCCCAACCTGAAGGGGGAGGAAGAGCCGCTTGTGGGCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS CAA 72 bp | TCACTGCCCACAAGCGGCTCTTCCTCCCCCTTCAGGTaGGGACCCGACCCAGGCTTCAGCTCTTCTAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SLPTSGSSSPFR*GPDPGFSSSST Trigger: AGTACTAGAAGAGCTGAAGCCTGGGTCGGGTCCCAACCTGAAGGGGGAGGAAGAGCCGCTTGTGGGCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS CAA 90 bp | GCTTCATCCTCACTGCCCACAAGCGGCTCTTCCTCCCCCTTCAGGTaGGGACCCGACCCAGGCTTCAGCTCTTCTAGTACTAAAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSLPTSGSSSPFR*GPDPGFSSSSTKEP Trigger: GGGCTCTTTAGTACTAGAAGAGCTGAAGCCTGGGTCGGGTCCCAACCTGAAGGGGGAGGAAGAGCCGCTTGTGGGCAGTGAGGATGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS GCA 72 bp | GCCACGGGCCACACTGGAACTCTCCACAGAACTGGTTaGTGTGGTAGCAGGGAGTCCATGCATCTCACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ATGHTGTLHRTG*CGSRESMHLTR Trigger: TCGAGTGAGATGCATGGACTCCCTGCTACCACAGCAACCAGTTCTGTGGAGAGTTCCAGTGTGGCCCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
||
| CDS CAA 90 bp | GAGATTGAGGTGCGGCCTCATCTTTGGCTTGTGGACCGTCAGAAGTaGGGGTTTCCACAGCTTCATCCTCACTGCCCACAAGCGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EIEVRPHLWLVDRQK*GFPQLHPHCPQAAL Trigger: AAGAGCCGCTTGTGGGCAGTGAGGATGAAGCTGTGGAAACCCCAACTTCTGACGGTCCACAAGCCAAAGATGAGGCCGCACCTCAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS CCA 72 bp | GACCCAGGCTTCAGCTCTTCTAGTACTAAAGAGCCCTaGCGAGACTTCCGTCTGCTGAAGAACGTAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DPGFSSSSTKEP*RDFRLLKNVVS Trigger: GCTCACTACGTTCTTCAGCAGACGGAAGTCTCGCCAGGGCTCTTTAGTACTAGAAGAGCTGAAGCCTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 ENSMUST00000205483.2 |
||
| CDS CCA 72 bp | GATTCTTGGCTTGGTGACCTGGTGGTTATGGGATCTTaGGTAGACGTCGTGGATGTTTTTCTGCTGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: DSWLGDLVVMGS*VDVVDVFLLET Trigger: AGTTTCCAGCAGAAAAACATCCACGACGTCTACCCAAGATCCCATAACCACCAGGTCACCAAGCCAAGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
||
| CDS CCA 72 bp | ATAAGCATGGGCACCAGTAACATGCCACTTGATTCTTaGCTTGGTGACCTGGTGGTTATGGGATCTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ISMGTSNMPLDS*LGDLVVMGSWV Trigger: TACCCAAGATCCCATAACCACCAGGTCACCAAGCCAAGAATCAAGTGGCATGTTACTGGTGCCCATGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049931.6 ENSMUST00000143713.2 |
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