Pregenerated sensors for SPIRE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010154Ensembl transcript IDs: ENSMUST00000010298.7, ENSMUST00000212404.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGCCGTGGGGGTCGGTCAGGCGCAAAGCACACAGCCGCATAGCCTaGGCAAAGGTGCGCACAGCTCGGGGGCCGCCCTCAGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: APWGSVRRKAHSRIA*AKVRTARGPPSASS Trigger: GGAGGAGGCTGAGGGCGGCCCCCGAGCTGTGCGCACCTTTGCCCAGGCTATGCGGCTGTGTGCTTTGCGCCTGACCGACCCCCACGGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | GAAACCCTGGTCTCGGCTGCTGGGCCTCCAGGAGTGCATGCTACCTaGTCTGGCCCGAGGTGGCTCCGTCCCTCCTGGGGGCTGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: ETLVSAAGPPGVHAT*SGPRWLRPSWGLSG Trigger: GCCGCTCAGCCCCCAGGAGGGACGGAGCCACCTCGGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGACCAGGGTTTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | TGCTCTGGCCCGAGGTGGCTCCGTCCCTCCTGGGGGCTGAGCGGCTaGCTGAAGGCCAGATGCCATCTCGCTCCGAAGCTGGGCCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: CSGPRWLRPSWGLSG*LKARCHLAPKLGQV Trigger: GACCTGGCCCAGCTTCGGAGCGAGATGGCATCTGGCCTTCAGTCAGCCGCTCAGCCCCCAGGAGGGACGGAGCCACCTCGGGCCAGAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | CAGGACAGAAACCCTGGTCTCGGCTGCTGGGCCTCCAGGAGTGCATaGTACCTGCTCTGGCCCGAGGTGGCTCCGTCCCTCCTGGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QDRNPGLGCWASRSA*YLLWPEVAPSLLGA Trigger: AGCCCCCAGGAGGGACGGAGCCACCTCGGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGACCAGGGTTTCTGTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GCTGGGACTGGCCGCTCACAGGACAGAAACCCTGGTCTCGGCTGCTaGGCCTCCAGGAGTGCATGCTACCTGCTCTGGCCCGAGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: AGTGRSQDRNPGLGC*ASRSACYLLWPEVA Trigger: AGCCACCTCGGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGACCAGGGTTTCTGTCCTGTGAGCGGCCAGTCCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | GAAGGCACGAAGCTCCAGTGTCTCCACAAAGAGAGCTCGGCACACTaGCTGGTAGTGGGCCTGCGCGCCGTGGGGGTCGGTCAGGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: EGTKLQCLHKESSAH*LVVGLRAVGVGQAQ Trigger: TTGCGCCTGACCGACCCCCACGGCGCGCAGGCCCACTACCAGGCAGTGTGCCGAGCTCTCTTTGTGGAGACACTGGAGCTTCGTGCCTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GAGCTCAAGCTACTGGGCAAGGCAGAGCTGGGGAGAGGCTGGGACTaGCCGCTCACAGGACAGAAACCCTGGTCTCGGCTGCTGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ELKLLGKAELGRGWD*PLTGQKPWSRLLGL Trigger: GAGGCCCAGCAGCCGAGACCAGGGTTTCTGTCCTGTGAGCGGCCAGTCCCAGCCTCTCCCCAGCTCTGCCTTGCCCAGTAGCTTGAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | TCTGCAAGGGTGGGGGCTTTGAGCAGGACCCGGGGCCGTGGGCGCTaGCTCCCGCTCCCAGTATCGGTGACAGACAGGTTGATGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SARVGALSRTRGRGR*LPLPVSVTDRLMQE Trigger: TTCCTGCATCAACCTGTCTGTCACCGATACTGGGAGCGGGAGTCAGCGCCCACGGCCCCGGGTCCTGCTCAAAGCCCCCACCCTTGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | CTCAGCCTCCTCCTCCTCTTCTGGACCCACGTAGCCCTCATCCGCTaGCCCGCAGCTGCTGTCTTCGCAGTCGCTGTTGGCCATGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LSLLLLFWTHVALIR*PAAAVFAVAVGHEV Trigger: GACCTCATGGCCAACAGCGACTGCGAAGACAGCAGCTGCGGGGCAGCGGATGAGGGCTACGTGGGTCCAGAAGAGGAGGAGGAGGCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | TCTCCTGCACCTTCTTCAGCTTTACCCCGTGACGGAGCTCCCGCATaGGCTGGACCCACAGCCGGGCCCAGTCTGTGTGTCCCAGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SPAPSSALPRDGAPA*AGPTAGPSLCVPGG Trigger: ACCACCTGGGACACACAGACTGGGCCCGGCTGTGGGTCCAGCTCATGCGGGAGCTCCGTCACGGGGTAAAGCTGAAGAAGGTGCAGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GGGCAGGGAACCAAACCCACGGCCTCCCAAGTGCTGGGCCCCGACTaGACGAAGCCTCCGCTCCTGCTTGATTTCCTCCAGGATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GQGTKPTASQVLGPD*TKPPLLLDFLQDLL Trigger: GAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCACTTGGGAGGCCGTGGGTTTGGTTCCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | TTCCATCTCTGCAAGGGTGGGGGCTTTGAGCAGGACCCGGGGCCGTaGGCGCTGACTCCCGCTCCCAGTATCGGTGACAGACAGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: FHLCKGGGFEQDPGP*ALTPAPSIGDRQVD Trigger: ATCAACCTGTCTGTCACCGATACTGGGAGCGGGAGTCAGCGCCCACGGCCCCGGGTCCTGCTCAAAGCCCCCACCCTTGCAGAGATGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GTCTGTGTGTCCCAGGTGGTCGAGCTCGGCCAGTGGCTTCTCCCGTaGCTCCTCCTCCCCCAGTTTCTTCAGCATCTCTTTGGCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VCVSQVVELGQWLLP*LLLPQFLQHLFGLP Trigger: AGGGAGGCCAAAGAGATGCTGAAGAAACTGGGGGAGGAGGAGCCACGGGAGAAGCCACTGGCCGAGCTCGACCACCTGGGACACACAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | CCTCAGGTCCATCCACTGAGCTCAAGCTACTGGGCAAGGCAGAGCTaGGGAGAGGCTGGGACTGGCCGCTCACAGGACAGAAACCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PQVHPLSSSYWARQS*GEAGTGRSQDRNPG Trigger: ACCAGGGTTTCTGTCCTGTGAGCGGCCAGTCCCAGCCTCTCCCCAGCTCTGCCTTGCCCAGTAGCTTGAGCTCAGTGGATGGACCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | TATCTGGTGAAGCCGCCTCAGGTCCATCCACTGAGCTCAAGCTACTaGGCAAGGCAGAGCTGGGGAGAGGCTGGGACTGGCCGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: YLVKPPQVHPLSSSY*ARQSWGEAGTGRSQ Trigger: CTGTGAGCGGCCAGTCCCAGCCTCTCCCCAGCTCTGCCTTGCCCAGTAGCTTGAGCTCAGTGGATGGACCTGAGGCGGCTTCACCAGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | AGTGGGTTGAACTCCTTCTCCTGCACCTTCTTCAGCTTTACCCCGTaGCGGAGCTCCCGCATGAGCTGGACCCACAGCCGGGCCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: SGLNSFSCTFFSFTP*RSSRMSWTHSRAQS Trigger: AGACTGGGCCCGGCTGTGGGTCCAGCTCATGCGGGAGCTCCGTCACGGGGTAAAGCTGAAGAAGGTGCAGGAGAAGGAGTTCAACCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | CGGCCTCCCAAGTGCTGGGCCCCGACTGGACGAAGCCTCCGCTCCTaGTTGATTTCCTCCAGGATCTTCTCGTGCAGTGTTCTTTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RPPKCWAPTGRSLRS*LISSRIFSCSVLCF Trigger: GAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCACTTGGGAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GGGAACTCCTCCTCCACGCTCCGCCACTTTGGTCCCTGCAGGGATTaGAAGGCATCTCTCCTCAGTGTTGGCGTGGCTTTGGTAGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GNSSSTLRHFGPCRD*KASLLSVGVALVVG Trigger: GCCAACTACCAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GTGGGCATAGATGTGGGGGAACTCCTCCTCCACGCTCCGCCACTTTaGTCCCTGCAGGGATTGGAAGGCATCTCTCCTCAGTGTTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: VGIDVGELLLHAPPL*SLQGLEGISPQCWR Trigger: ACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCCCCACATCTATGCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | CCTGGTGTTGGGGATATAGAGGGACTGGGTCTGACGGCTTCGTCGTaGAGTGGCATTGAGGACATCCACGCTCTTGCGGCTGGAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: PGVGDIEGLGLTASS*SGIEDIHALAAGAH Trigger: GTGTGCTCCAGCCGCAAGAGCGTGGATGTCCTCAATGCCACTCCACGACGAAGCCGTCAGACCCAGTCCCTCTATATCCCCAACACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | GGATATAGAGGGACTGGGTCTGACGGCTTCGTCGTGGAGTGGCATTaGGGACATCCACGCTCTTGCGGCTGGAGCACACGACATCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GYRGTGSDGFVVEWH*GHPRSCGWSTRHQP Trigger: TGGCTGATGTCGTGTGCTCCAGCCGCAAGAGCGTGGATGTCCTCAATGCCACTCCACGACGAAGCCGTCAGACCCAGTCCCTCTATATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | TTCCTGGCACGGATATCCTGCATCAGCATCTCGAAGGGGGTGAGCTaGAACTCGGTGGGCAGTGGGTTGAACTCCTTCTCCTGCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: FLARISCISISKGVS*NSVGSGLNSFSCTF Trigger: GAAGGTGCAGGAGAAGGAGTTCAACCCACTGCCCACCGAGTTCCAGCTCACCCCCTTCGAGATGCTGATGCAGGATATCCGTGCCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | ACTTGGCTCGGCAGCAACAGCAAATCTTCCCCCTCTTCAGGCTGCTaGAGAGCTCCTTGTCCTGCAGAAACCTCTCCATCTCCGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TWLGSNSKSSPSSGC*RAPCPAETSPSPPS Trigger: TGAAGGCGGAGATGGAGAGGTTTCTGCAGGACAAGGAGCTCTTCAGCAGCCTGAAGAGGGGGAAGATTTGCTGTTGCTGCCGAGCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | TTACGCTACAGGAAGTGCACACAGCTCTCTTGCAGAAGAGACAGGTaGGTGGCCAGGAAAACAGGGGAAACTTGGCTCGGCAGCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: LRYRKCTQLSCRRDR*VARKTGETWLGSNS Trigger: GCTGTTGCTGCCGAGCCAAGTTTCCCCTGTTTTCCTGGCCACCCACCTGTCTCTTCTGCAAGAGAGCTGTGTGCACTTCCTGTAGCGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | CCACTTTGGTCCCTGCAGGGATTGGAAGGCATCTCTCCTCAGTGTTaGCGTGGCTTTGGTAGTTGGCACCCTCTGAAGACTCTCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PLWSLQGLEGISPQC*RGFGSWHPLKTLKA Trigger: GGCTTTGAGAGTCTTCAGAGGGTGCCAACTACCAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | CTTCAGTGGAGGCCGAGAACGAATGAAGTCCAGGATAAGTTCATGTaGGTCCTTCTTCACCCTGGGAGGGATGTCCCCATCGACCATGAC | + |
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Preference number: 5 (lower is better) Translates to: LQWRPRTNEVQDKFM*VLLHPGRDVPIDHD Trigger: GTCATGGTCGATGGGGACATCCCTCCCAGGGTGAAGAAGGACGCACATGAACTTATCCTGGACTTCATTCGTTCTCGGCCTCCACTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GTGTTCCGAAAAAGAGCGGTCCCGCTTCAGTGCCACCTCCCCACATaGGGACTCTTCTTCCTCAGACGTGTTCATTTCTTCCATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VFRKRAVPLQCHLPT*GLFFLRRVHFFHLC Trigger: GCAGAGATGGAAGAAATGAACACGTCTGAGGAAGAAGAGTCCCCATGTGGGGAGGTGGCACTGAAGCGGGACCGCTCTTTTTCGGAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GCTACAGGAAGTGCACACAGCTCTCTTGCAGAAGAGACAGGTGGGTaGCCAGGAAAACAGGGGAAACTTGGCTCGGCAGCAACAGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: ATGSAHSSLAEETGG*PGKQGKLGSAATAN Trigger: ATTTGCTGTTGCTGCCGAGCCAAGTTTCCCCTGTTTTCCTGGCCACCCACCTGTCTCTTCTGCAAGAGAGCTGTGTGCACTTCCTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | GGACGAAGCCTCCGCTCCTGCTTGATTTCCTCCAGGATCTTCTCGTaGAGTGTTCTTTGCTTCTGTGGTACAGGGCGAAGTTGTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GRSLRSCLISSRIFS*SVLCFCGTGRSCLS Trigger: AGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 90 bp | GTGCAGTGTTCTTTGCTTCTGTGGTACAGGGCGAAGTTGTCTCTCTaGGACCTGCTTCAGTGGAGGCCGAGAACGAATGAAGTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VQCSLLLWYRAKLSL*DLLQWRPRTNEVQD Trigger: ATCCTGGACTTCATTCGTTCTCGGCCTCCACTGAAGCAGGTCTCAGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGAACACTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | CGCTCCTGCTTGATTTCCTCCAGGATCTTCTCGTGCAGTGTTCTTTaGTTCTGTGGTACAGGGCGAAGTTGTCTCTCTGAGACCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RSCLISSRIFSCSVL*FCGTGRSCLSETCF Trigger: GAAGCAGGTCTCAGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 90 bp | GGATTGGAAGGCATCTCTCCTCAGTGTTGGCGTGGCTTTGGTAGTTaGCACCCTCTGAAGACTCTCAAAGCCAAGTGTGTAGACAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GLEGISPQCWRGFGS*HPLKTLKAKCVDRD Trigger: ATCCCTGTCTACACACTTGGCTTTGAGAGTCTTCAGAGGGTGCCAACTACCAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 90 bp | GTTCTTTGCTTCTGTGGTACAGGGCGAAGTTGTCTCTCTGAGACCTaGTTCAGTGGAGGCCGAGAACGAATGAAGTCCAGGATAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VLCFCGTGRSCLSET*FSGGRERMKSRISS Trigger: TGAACTTATCCTGGACTTCATTCGTTCTCGGCCTCCACTGAAGCAGGTCTCAGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | GTCTCGGCTGCTGGGCCTCCAGGAGTGCATGCTACCTaGTCTGGCCCGAGGTGGCTCCGTCCCTCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSAAGPPGVHAT*SGPRWLRPSWG Trigger: CCCCCAGGAGGGACGGAGCCACCTCGGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | GGGTCGGTCAGGCGCAAAGCACACAGCCGCATAGCCTaGGCAAAGGTGCGCACAGCTCGGGGGCCGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSVRRKAHSRIA*AKVRTARGPPS Trigger: TGAGGGCGGCCCCCGAGCTGTGCGCACCTTTGCCCAGGCTATGCGGCTGTGTGCTTTGCGCCTGACCGACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | TGGACCCACAGCCGGGCCCAGTCTGTGTGTCCCAGGTaGTCGAGCTCGGCCAGTGGCTTCTCCCGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: WTHSRAQSVCPR*SSSASGFSRGS Trigger: GGAGCCACGGGAGAAGCCACTGGCCGAGCTCGACCACCTGGGACACACAGACTGGGCCCGGCTGTGGGTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 72 bp | CCGAGGTGGCTCCGTCCCTCCTGGGGGCTGAGCGGCTaGCTGAAGGCCAGATGCCATCTCGCTCCGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PRWLRPSWGLSG*LKARCHLAPKL Trigger: CAGCTTCGGAGCGAGATGGCATCTGGCCTTCAGTCAGCCGCTCAGCCCCCAGGAGGGACGGAGCCACCTCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | AACCCTGGTCTCGGCTGCTGGGCCTCCAGGAGTGCATaGTACCTGCTCTGGCCCGAGGTGGCTCCGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: NPGLGCWASRSA*YLLWPEVAPSL Trigger: GAGGGACGGAGCCACCTCGGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGACCAGGGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | CAGGGCAGGGAACCAAACCCACGGCCTCCCAAGTGCTaGGCCCCGACTGGACGAAGCCTCCGCTCCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QGREPNPRPPKC*APTGRSLRSCL Trigger: CAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCACTTGGGAGGCCGTGGGTTTGGTTCCCTGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | GGCCGCTCACAGGACAGAAACCCTGGTCTCGGCTGCTaGGCCTCCAGGAGTGCATGCTACCTGCTCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRSQDRNPGLGC*ASRSACYLLWP Trigger: GGGCCAGAGCAGGTAGCATGCACTCCTGGAGGCCCAGCAGCCGAGACCAGGGTTTCTGTCCTGTGAGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | CTCCTCCTCTTCTGGACCCACGTAGCCCTCATCCGCTaGCCCGCAGCTGCTGTCTTCGCAGTCGCTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLFWTHVALIR*PAAAVFAVAVG Trigger: GCCAACAGCGACTGCGAAGACAGCAGCTGCGGGGCAGCGGATGAGGGCTACGTGGGTCCAGAAGAGGAGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 72 bp | CCTTCTTCAGCTTTACCCCGTGACGGAGCTCCCGCATaGGCTGGACCCACAGCCGGGCCCAGTCTGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSSALPRDGAPA*AGPTAGPSLCV Trigger: GACACACAGACTGGGCCCGGCTGTGGGTCCAGCTCATGCGGGAGCTCCGTCACGGGGTAAAGCTGAAGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 72 bp | TGTTCATTTCTTCCATCTCTGCAAGGGTGGGGGCTTTaGGCAGGACCCGGGGCCGTGGGCGCTGACTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: CSFLPSLQGWGL*AGPGAVGADSR Trigger: GCGGGAGTCAGCGCCCACGGCCCCGGGTCCTGCTCAAAGCCCCCACCCTTGCAGAGATGGAAGAAATGAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | CCAGTCTGTGTGTCCCAGGTGGTCGAGCTCGGCCAGTaGCTTCTCCCGTGGCTCCTCCTCCCCCAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVCVSQVVELGQ*LLPWLLLPQFL Trigger: AAGAAACTGGGGGAGGAGGAGCCACGGGAGAAGCCACTGGCCGAGCTCGACCACCTGGGACACACAGACTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 72 bp | GGGACTGGGTCTGACGGCTTCGTCGTGGAGTGGCATTaGGGACATCCACGCTCTTGCGGCTGGAGCACACGA | + |
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Preference number: 6 (lower is better) Translates to: GTGSDGFVVEWH*GHPRSCGWSTR Trigger: TCGTGTGCTCCAGCCGCAAGAGCGTGGATGTCCTCAATGCCACTCCACGACGAAGCCGTCAGACCCAGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 90 bp | CGTGGGCATAGATGTGGGGGAACTCCTCCTCCACGCTCCGCCACTTaGGTCCCTGCAGGGATTGGAAGGCATCTCTCCTCAGTGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: RGHRCGGTPPPRSAT*VPAGIGRHLSSVLA Trigger: CGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCCCCACATCTATGCCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | GGGAACTCCTCCTCCACGCTCCGCCACTTTGGTCCCTaGAGGGATTGGAAGGCATCTCTCCTCAGTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GNSSSTLRHFGP*RDWKASLLSVG Trigger: GCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | GATGTGGGGGAACTCCTCCTCCACGCTCCGCCACTTTaGTCCCTGCAGGGATTGGAAGGCATCTCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: DVGELLLHAPPL*SLQGLEGISPQ Trigger: CTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCCCCACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 90 bp | GGGGAACTCCTCCTCCACGCTCCGCCACTTTGGTCCCTGCAGGGATaGGAAGGCATCTCTCCTCAGTGTTGGCGTGGCTTTGGTAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GELLLHAPPLWSLQG*EGISPQCWRGFGSW Trigger: CCAACTACCAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | TCCTCCACGCTCCGCCACTTTGGTCCCTGCAGGGATTaGAAGGCATCTCTCCTCAGTGTTGGCGTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSTLRHFGPCRD*KASLLSVGVAL Trigger: CAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | GGGGATATAGAGGGACTGGGTCTGACGGCTTCGTCGTaGAGTGGCATTGAGGACATCCACGCTCTTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GDIEGLGLTASS*SGIEDIHALAA Trigger: AGCCGCAAGAGCGTGGATGTCCTCAATGCCACTCCACGACGAAGCCGTCAGACCCAGTCCCTCTATATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 72 bp | CTCCTCCACGCTCCGCCACTTTGGTCCCTGCAGGGATaGGAAGGCATCTCTCCTCAGTGTTGGCGTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLHAPPLWSLQG*EGISPQCWRGF Trigger: AAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 72 bp | AGATGTGGGGGAACTCCTCCTCCACGCTCCGCCACTTaGGTCCCTGCAGGGATTGGAAGGCATCTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCGGTPPPRSAT*VPAGIGRHLSS Trigger: TGAGGAGAGATGCCTTCCAATCCCTGCAGGGACCAAAGTGGCGGAGCGTGGAGGAGGAGTTCCCCCACATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 90 bp | CCTCCCAAGTGCTGGGCCCCGACTGGACGAAGCCTCCGCTCCTGCTaGATTTCCTCCAGGATCTTCTCGTGCAGTGTTCTTTGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PPKCWAPTGRSLRSC*ISSRIFSCSVLCFC Trigger: ACAGAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCACTTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | AAGTGCTGGGCCCCGACTGGACGAAGCCTCCGCTCCTaGTTGATTTCCTCCAGGATCTTCTCGTGCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: KCWAPTGRSLRS*LISSRIFSCSV Trigger: AACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | CGGATATCCTGCATCAGCATCTCGAAGGGGGTGAGCTaGAACTCGGTGGGCAGTGGGTTGAACTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RISCISISKGVS*NSVGSGLNSFS Trigger: GGAGAAGGAGTTCAACCCACTGCCCACCGAGTTCCAGCTCACCCCCTTCGAGATGCTGATGCAGGATATCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 72 bp | TGCTGGGCCCCGACTGGACGAAGCCTCCGCTCCTGCTaGATTTCCTCCAGGATCTTCTCGTGCAGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CWAPTGRSLRSC*ISSRIFSCSVL Trigger: AAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAGGCTTCGTCCAGTCGGGGCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CCA 72 bp | TCCCTGCAGGGATTGGAAGGCATCTCTCCTCAGTGTTaGCGTGGCTTTGGTAGTTGGCACCCTCTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SLQGLEGISPQC*RGFGSWHPLKT Trigger: AGTCTTCAGAGGGTGCCAACTACCAAAGCCACGCCAACACTGAGGAGAGATGCCTTCCAATCCCTGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS CAA 72 bp | GTATCGGTGACAGACAGGTTGATGCAGGAAGTGGACTaGATGTCCCCAGAGCAGGCATTGAGGATGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VSVTDRLMQEVD*MSPEQALRMQG Trigger: GCCCTGCATCCTCAATGCCTGCTCTGGGGACATCAAGTCCACTTCCTGCATCAACCTGTCTGTCACCGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | AGGCCGAGAACGAATGAAGTCCAGGATAAGTTCATGTaGGTCCTTCTTCACCCTGGGAGGGATGTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: RPRTNEVQDKFM*VLLHPGRDVPI Trigger: GATGGGGACATCCCTCCCAGGGTGAAGAAGGACGCACATGAACTTATCCTGGACTTCATTCGTTCTCGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | TTCTGTGGTACAGGGCGAAGTTGTCTCTCTGAGACCTaGTTCAGTGGAGGCCGAGAACGAATGAAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FCGTGRSCLSET*FSGGRERMKSR Trigger: CCTGGACTTCATTCGTTCTCGGCCTCCACTGAAGCAGGTCTCAGAGAGACAACTTCGCCCTGTACCACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | AGCACACGACATCAGCCACAAAGCTGGTGCAGTCACTaGAGACATCCTTTAGGACACAGCCGTGGGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: STRHQPQSWCSH*RHPLGHSRGHR Trigger: TCTATGCCCACGGCTGTGTCCTAAAGGATGTCTGCAGTGACTGCACCAGCTTTGTGGCTGATGTCGTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | CTCCGCTCCTGCTTGATTTCCTCCAGGATCTTCTCGTaGAGTGTTCTTTGCTTCTGTGGTACAGGGCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LRSCLISSRIFS*SVLCFCGTGRS Trigger: ACTTCGCCCTGTACCACAGAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAAGCAGGAGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS TCA 72 bp | TCTTTGCTTCTGTGGTACAGGGCGAAGTTGTCTCTCTaGGACCTGCTTCAGTGGAGGCCGAGAACGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: SLLLWYRAKLSL*DLLQWRPRTNE Trigger: TTCATTCGTTCTCGGCCTCCACTGAAGCAGGTCTCAGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | TCTTGGAAGGCATCTTCATCTTTACGCTACAGGAAGTaGACACAGCTCTCTTGCAGAAGAGACAGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SWKASSSLRYRK*TQLSCRRDRWV Trigger: CACCCACCTGTCTCTTCTGCAAGAGAGCTGTGTGCACTTCCTGTAGCGTAAAGATGAAGATGCCTTCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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| CDS GCA 72 bp | TTGATTTCCTCCAGGATCTTCTCGTGCAGTGTTCTTTaGTTCTGTGGTACAGGGCGAAGTTGTCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LISSRIFSCSVL*FCGTGRSCLSE Trigger: CTCAGAGAGACAACTTCGCCCTGTACCACAGAAGCAAAGAACACTGCACGAGAAGATCCTGGAGGAAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010298.7 ENSMUST00000212404.2 |
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