Pregenerated sensors for SPINKL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053729

Ensembl transcript IDs: ENSMUST00000066328.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TTCTATGCAGAAGTAACACTCATTGTAATATGTATTTCTATCATCTaGACAAACTGGGTTCTCAGCGATATTGGAGCACTCAGATTTACT	+
Preference number: 5 (lower is better) Translates to: FYAEVTLIVICISII*TNWVLSDIGALRFT Trigger: AGTAAATCTGAGTGCTCCAATATCGCTGAGAACCCAGTTTGTGCAGATGATAGAAATACATATTACAATGAGTGTTACTTCTGCATAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066328.5
CDS CCA 90 bp	GAAGTAACACTCATTGTAATATGTATTTCTATCATCTGCACAAACTaGGTTCTCAGCGATATTGGAGCACTCAGATTTACTCTTATACAT	+
Preference number: 5 (lower is better) Translates to: EVTLIVICISIICTN*VLSDIGALRFTLIH Trigger: ATGTATAAGAGTAAATCTGAGTGCTCCAATATCGCTGAGAACCCAGTTTGTGCAGATGATAGAAATACATATTACAATGAGTGTTACTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066328.5
CDS CCA 72 bp	GGAGCACTCAGATTTACTCTTATACATGGTGCAATTTaGCTCTTTAATAACATTCTCTGGACCTGCAAAGAT	+
Preference number: 6 (lower is better) Translates to: GALRFTLIHGAI*LFNNILWTCKD Trigger: ATCTTTGCAGGTCCAGAGAATGTTATTAAAGAGCCAAATTGCACCATGTATAAGAGTAAATCTGAGTGCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066328.5
CDS TCA 72 bp	TTTAATAACATTCTCTGGACCTGCAAAGATATTCACTaGAAACACAGAATAAGGAAGAAGCACCAAAGTCAG	+
Preference number: 6 (lower is better) Translates to: FNNILWTCKDIH*KHRIRKKHQSQ Trigger: CTGACTTTGGTGCTTCTTCCTTATTCTGTGTTTTCAGTGAATATCTTTGCAGGTCCAGAGAATGTTATTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066328.5

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