RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPINK7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060201

Ensembl transcript IDs: ENSMUST00000076194.6

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CCCATCTGTAACGCACATGATGAAGGCATCGCTGTTCTTTCTATGTCCATGGAGCAATGGGGCAAGGGATaGCCACCACTGGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: PICNAHDEGIAVLSMSMEQWGKG*PPLGTS
Trigger: AGAAGTACCCAGTGGTGGCCATCCCTTGCCCCATTG...CTCCATGGACATAGAAAGAACAGCGATGCCTTCATCATGTGCGTTACAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR TCA 90 bp AAGGACTTTCCACAGTCAGTGATGGTGACTGAATCTAGATCCGACTCCACCAGAACAGTCCACTGTTGCTaGAGGGTGGCTAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: KDFPQSVMVTESRSDSTRTVHCC*RVASNF
Trigger: GAAGTTACTAGCCACCCTTCAGCAACAGTGGACTGT...TCTGGTGGAGTCGGATCTAGATTCAGTCACCATCACTGACTGTGGAAAGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR GCA 90 bp GTTGATAGGAATGATCACAAGGACTTTCCACAGTCAGTGATGGTGACTGAATCTGCAGACATAGGTTGCTaGGAAGAGCAGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: VDRNDHKDFPQSVMVTESADIGC*EEQQET
Trigger: GGTCTCCTGCTGCTCTTCGCAGCAACCTATGTCTGC...AGATTCAGTCACCATCACTGACTGTGGAAAGTCCTTGTGATCATTCCTATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR CCA 90 bp CAGAGCCCATCTGTAACGCACATGATGAAGGCATCGCTGTTCTTTCTATGTCCAACTGTTGCTGAAGGGTaGCTAGTAACTTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QSPSVTHMMKASLFFLCPTVAEG*LVTSEQ
Trigger: CTGCTCTGAAGTTACTAGCCACCCTTCAGCAACAGT...TGGACATAGAAAGAACAGCGATGCCTTCATCATGTGCGTTACAGATGGGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR CCA 90 bp CCCATCTGTAACGCACATGATGAAGGCATCGCTGTTCTTTCTATGTCCATGGAGAGGGATGGCCACCACTaGGTACTTCTTGTATATGTC +
Preference number: 4 (lower is better)
Translates to: PICNAHDEGIAVLSMSMERDGHH*VLLVYV
Trigger: GACATATACAAGAAGTACCCAGTGGTGGCCATCCCT...CTCCATGGACATAGAAAGAACAGCGATGCCTTCATCATGTGCGTTACAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR TCA 90 bp GTTGATAGGAATGATCACAAGGACTTTCCACAGTCAGTGATGGTGACTGAATCTCAGCAGTGCCCTTCATaGAGAAACTGGATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VDRNDHKDFPQSVMVTESQQCPS*RNWIFP
Trigger: TGGAAAAATCCAGTTTCTTCATGAAGGGCACTGCTG...AGATTCAGTCACCATCACTGACTGTGGAAAGTCCTTGTGATCATTCCTATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR GCA 90 bp CCCATCTGTAACGCACATGATGAAGGCATCGCTGTTCTTTCTATGTCCATGGAGACTGGATTTTTCCATTaGTTCTCAAGATCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: PICNAHDEGIAVLSMSMETGFFH*FSRSLY
Trigger: GTACAGAGATCTTGAGAAGCAATGGAAAAATCCAGT...CTCCATGGACATAGAAAGAACAGCGATGCCTTCATCATGTGCGTTACAGATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS CCA 90 bp TATAGTCAGATCCACAAACTGGTATGTTTACAATGGGGCAAGGGATaGCCACCACTGGGTACTTCTTGTATATGTCACAGTCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: YSQIHKLVCLQWGKG*PPLGTSCICHSPLL
Trigger: CAACAGTGGACTGTGACATATACAAGAAGTACCCAGTGGTGGCCATCCCTTGCCCCATTGTAAACATACCAGTTTGTGGATCTGACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS-3UTR CAA 90 bp AAGGACTTTCCACAGTCAGTGATGGTGACTGAATCTAGATCCGACTCCACCAGAAACTGGATTTTTCCATaGCTTCTCAAGATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: KDFPQSVMVTESRSDSTRNWIFP*LLKISV
Trigger: TACAGAGATCTTGAGAAGCAATGGAAAAATCCAGTT...TCTGGTGGAGTCGGATCTAGATTCAGTCACCATCACTGACTGTGGAAAGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS TCA 90 bp TGCTTCTCAAGATCTCTGTACACAGCTTGCATTTATTCCCGTAAGTaGTATAGTCAGATCCACAAACTGGTATGTTTACAATGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: CFSRSLYTACIYSRK*YSQIHKLVCLQWGK
Trigger: CTTGCCCCATTGTAAACATACCAGTTTGTGGATCTGACTATATCACTTACGGGAATAAATGCAAGCTGTGTACAGAGATCTTGAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS GCA 72 bp GTGGCTAGTAACTTCAGAGCAGTTGCAGACATAGGTTaGTGCGAAGAGCAGCAGGAGACCACCAACAAGCTT +
Preference number: 6 (lower is better)
Translates to: VASNFRAVADIG*CEEQQETTNKL
Trigger: AAGCTTGTTGGTGGTCTCCTGCTGCTCTTCGCAGCAACCTATGTCTGCAACTGCTCTGAAGTTACTAGCCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS GCA 72 bp GCTAGTAACTTCAGAGCAGTTGCAGACATAGGTTGCTaGGAAGAGCAGCAGGAGACCACCAACAAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: ASNFRAVADIGC*EEQQETTNKLH
Trigger: ATGAAGCTTGTTGGTGGTCTCCTGCTGCTCTTCGCAGCAACCTATGTCTGCAACTGCTCTGAAGTTACTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS CCA 72 bp TGGTATGTTTACAATGGGGCAAGGGATGGCCACCACTaGGTACTTCTTGTATATGTCACAGTCCACTGTTGC +
Preference number: 6 (lower is better)
Translates to: WYVYNGARDGHH*VLLVYVTVHCC
Trigger: GCAACAGTGGACTGTGACATATACAAGAAGTACCCAGTGGTGGCCATCCCTTGCCCCATTGTAAACATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS TCA 72 bp TGGGTACTTCTTGTATATGTCACAGTCCACTGTTGCTaGAGGGTGGCTAGTAACTTCAGAGCAGTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: WVLLVYVTVHCC*RVASNFRAVAD
Trigger: GTCTGCAACTGCTCTGAAGTTACTAGCCACCCTTCAGCAACAGTGGACTGTGACATATACAAGAAGTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS CCA 72 bp ATCCACAAACTGGTATGTTTACAATGGGGCAAGGGATaGCCACCACTGGGTACTTCTTGTATATGTCACAGT +
Preference number: 6 (lower is better)
Translates to: IHKLVCLQWGKG*PPLGTSCICHS
Trigger: ACTGTGACATATACAAGAAGTACCCAGTGGTGGCCATCCCTTGCCCCATTGTAAACATACCAGTTTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS CCA 72 bp TTTATTCCCGTAAGTGATATAGTCAGATCCACAAACTaGTATGTTTACAATGGGGCAAGGGATGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: FIPVSDIVRSTN*YVYNGARDGHH
Trigger: GTGGTGGCCATCCCTTGCCCCATTGTAAACATACCAGTTTGTGGATCTGACTATATCACTTACGGGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6
CDS TCA 72 bp AGATCTCTGTACACAGCTTGCATTTATTCCCGTAAGTaGTATAGTCAGATCCACAAACTGGTATGTTTACAA +
Preference number: 6 (lower is better)
Translates to: RSLYTACIYSRK*YSQIHKLVCLQ
Trigger: TTGTAAACATACCAGTTTGTGGATCTGACTATATCACTTACGGGAATAAATGCAAGCTGTGTACAGAGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076194.6