Pregenerated sensors for SPINK14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051050Ensembl transcript IDs: ENSMUST00000060328.9, ENSMUST00000162265.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGTAGAGATTGGGATTGATCCCAGAGTCCTCCAACCTGTGAGATaGTGCTTTAATTGTAAAATTGTAAGCTATCTCCAAGCCGGAATA | + |
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Preference number: 1 (lower is better) Translates to: FVEIGIDPRVLQPVR*CFNCKIVSYLQAGI Trigger: TATTCCGGCTTGGAGATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGGATCAATCCCAATCTCTACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| 3UTR TCA 72 bp | ATTCAGGAAACTTTGTTTATTTGTAGAGATTGGGATTaGTCCCAGAGTCCTCCAACCTGTGAGATGGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: IQETLFICRDWD*SQSPPTCEMVL Trigger: AAGCACCATCTCACAGGTTGGAGGACTCTGGGATCAATCCCAATCTCTACAAATAAACAAAGTTTCCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR GCA 90 bp | AACACAGAAGGACCATCCAGCCACCAGCTTCCAACAGGTCTTTGTTACCAGGAAAGGTTACAAAATTGGTaGCGCAGATGGGTTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: NTEGPSSHQLPTGLCYQERLQNW*RRWVVL Trigger: TAAAACAACCCATCTGCGGCACCAATTTTGTAACCT...TTCCTGGTAACAAAGACCTGTTGGAAGCTGGTGGCTGGATGGTCCTTCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | ATTGGGATTGATCCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAAAAATTGGTGCCGCAGATaGGTTGTTTTAGGTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: IGIDPRVLQPVRWCFNCKNWCRR*VVLGQG Trigger: GCCCTGACCTAAAACAACCCATCTGCGGCACCAATT...TTTACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGGATCAATCCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAAAATTGTAAGCTATCTCCAACCAAACTCGAGCACCTaGAGCAGCCAGGATAACCAA | + |
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Preference number: 4 (lower is better) Translates to: VLQPVRWCFNCKIVSYLQPNSST*SSQDNQ Trigger: TTGGTTATCCTGGCTGCTCCAGGTGCTCGAGTTTGG...TTGGAGATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGGTTGGAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | CCTGTGAGATGGTGCTTTAATTGTAAAATTGTAAGCTATCTCCAAGCCGGAATACCAAACTCGAGCACCTaGAGCAGCCAGGATAACCAA | + |
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Preference number: 4 (lower is better) Translates to: PVRWCFNCKIVSYLQAGIPNSST*SSQDNQ Trigger: TTGGTTATCCTGGCTGCTCCAGGTGCTCGAGTTTGG...TATTCCGGCTTGGAGATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | GAGATTGGGATTGATCCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTCATAGGTTACAAAATTaGTGCCGCAGATGGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: EIGIDPRVLQPVRWCFNCHRLQN*CRRWVV Trigger: AACAACCCATCTGCGGCACCAATTTTGTAACCTATG...ACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGGATCAATCCCAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR GCA 90 bp | GAGATTGGGATTGATCCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAGGTTACAAAATTGGTaGCGCAGATGGGTTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: EIGIDPRVLQPVRWCFNCRLQNW*RRWVVL Trigger: TAAAACAACCCATCTGCGGCACCAATTTTGTAACCT...ACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGGATCAATCCCAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | ATAGCTTATAGATTAAAGAAAACACAGAAGGACCATCCAGCCACCAGCTTCCAAGCCAGGATAACCAAGTaGAGCATAATGGAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: IAYRLKKTQKDHPATSFQARITK*SIMENK Trigger: TTTGTTCTCCATTATGCTCCACTTGGTTATCCTGGC...TTGGAAGCTGGTGGCTGGATGGTCCTTCTGTGTTTTCTTTAATCTATAAGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAAAATTGTAAGCTATGCCAGGATAACCAAGTaGAGCATAATGGAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: PRVLQPVRWCFNCKIVSYARITK*SIMENK Trigger: TTTGTTCTCCATTATGCTCCACTTGGTTATCCTGGC...ATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAAAATTGTAAGCTATCATAGGTTACAAAATTaGTGCCGCAGATGGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PRVLQPVRWCFNCKIVSYHRLQN*CRRWVV Trigger: AACAACCCATCTGCGGCACCAATTTTGTAACCTATG...ATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR GCA 90 bp | AGGAAACTTTGTTTATTTGTAGAGATTGGGATTGATCCCAGAGTCCTCCAACCTTCTCAACACACAAGATaGAGGGATTATCATAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: RKLCLFVEIGIDPRVLQPSQHTR*RDYHRL Trigger: TAACCTATGATAATCCCTGCATCTTGTGTGTTGAGA...AGGTTGGAGGACTCTGGGATCAATCCCAATCTCTACAAATAAACAAAGTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR GCA 90 bp | TGGTGCTTTAATTGTAAAATTGTAAGCTATCTCCAAGCCGGAATAGCTTATAGATCTCAACACACAAGATaGAGGGATTATCATAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: WCFNCKIVSYLQAGIAYRSQHTR*RDYHRL Trigger: TAACCTATGATAATCCCTGCATCTTGTGTGTTGAGA...TCTATAAGCTATTCCGGCTTGGAGATAGCTTACAATTTTACAATTAAAGCACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS CCA 90 bp | GTAGGCCACCAAACTCGAGCACCTGGAGCAGCCAGGATAACCAAGTaGAGCATAATGGAGAACAAAACTGAGCACTGGAAATATTTGACC | + |
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Preference number: 5 (lower is better) Translates to: VGHQTRAPGAARITK*SIMENKTEHWKYLT Trigger: GGTCAAATATTTCCAGTGCTCAGTTTTGTTCTCCATTATGCTCCACTTGGTTATCCTGGCTGCTCCAGGTGCTCGAGTTTGGTGGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CAA 90 bp | AAAACACAGAAGGACCATCCAGCCACCAGCTTCCAACAGGTCTTTGTTACCAGGCAGGGGTCCACTGTTTaGTTGAACCAACTCAAATTT | + |
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Preference number: 5 (lower is better) Translates to: KTQKDHPATSFQQVFVTRQGSTV*LNQLKF Trigger: AAATTTGAGTTGGTTCAACAAAACAGTGGACCCCTG...CCTGGTAACAAAGACCTGTTGGAAGCTGGTGGCTGGATGGTCCTTCTGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTCCTCCAACCTGTGAGATGGTGCTTTAATTGTAAAATTGTAAGCTATCAGGGGTCCACTGTTTaGTTGAACCAACTCAAATTT | + |
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Preference number: 5 (lower is better) Translates to: PRVLQPVRWCFNCKIVSYQGSTV*LNQLKF Trigger: AAATTTGAGTTGGTTCAACAAAACAGTGGACCCCTG...ATAGCTTACAATTTTACAATTAAAGCACCATCTCACAGGTTGGAGGACTCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS CCA 72 bp | AATAAGTCCATGTGTAGGCCACCAAACTCGAGCACCTaGAGCAGCCAGGATAACCAAGTGGAGCATAATGGA | + |
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Preference number: 6 (lower is better) Translates to: NKSMCRPPNSST*SSQDNQVEHNG Trigger: TCCATTATGCTCCACTTGGTTATCCTGGCTGCTCCAGGTGCTCGAGTTTGGTGGCCTACACATGGACTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS CCA 72 bp | CAAACTCGAGCACCTGGAGCAGCCAGGATAACCAAGTaGAGCATAATGGAGAACAAAACTGAGCACTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QTRAPGAARITK*SIMENKTEHWK Trigger: TTTCCAGTGCTCAGTTTTGTTCTCCATTATGCTCCACTTGGTTATCCTGGCTGCTCCAGGTGCTCGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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| CDS GCA 72 bp | TTCTTCCCCCAGATTTCAAGCTCTCAACACACAAGATaGAGGGATTATCATAGGTTACAAAATTGGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: FFPQISSSQHTR*RDYHRLQNWCR Trigger: GCGGCACCAATTTTGTAACCTATGATAATCCCTGCATCTTGTGTGTTGAGAGCTTGAAATCTGGGGGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060328.9 ENSMUST00000162265.3 |
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