Pregenerated sensors for SPINK12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061144Ensembl transcript IDs: ENSMUST00000081271.7, ENSMUST00000239465.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TACTTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCAGGAAGCACACTGCTGTaGAAACTGGGTAATAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YFLQTLCIATEELLTDRAGSTLL*KLGNKE Trigger: TTCCTTATTACCCAGTTTCCACAGCAGTGTGCTTCC...TGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTATGCGTAATAATTGGTaGGAAGCACACTGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FLQTLCIATEELLTDRAFMRNNW*EAHCCG Trigger: TCCACAGCAGTGTGCTTCCCACCAATTATTACGCAT...AAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTGGTGGGAAGCACACTaGTGTGGAAACTGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: IRYICLLQSILFYFLQTLWWEAH*CGNWVI Trigger: TATTACCCAGTTTCCACAGCAGTGTGCTTCCCACCA...GAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCATGCGTAATAATTGGTaGGAAGCACACTGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: IRYICLLQSILFYFLQTLMRNNW*EAHCCG Trigger: TCCACAGCAGTGTGCTTCCCACCAATTATTACGCAT...GAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACTATTCCAACATATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTATGGTGGGAAGCACACTaGTGTGGAAACTGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: TTIPTYCIRYICLLQSILWWEAH*CGNWVI Trigger: TATTACCCAGTTTCCACAGCAGTGTGCTTCCCACCA...TAGGATGCTCTGAAGTAAACATATGTACCGGATACAATATGTTGGAATAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR GCA 90 bp | CGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTGCAGTGTGGTAGTAGCCTaGTTAGTTTTCAAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RYICLLQSILFYFLQTLCSVVVA*LVFKFL Trigger: GAGAAATTTGAAAACTAAGCAGGCTACTACCACACT...GCAGAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR CCA 90 bp | TACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTGCATAGGAAGCACACTGCTGTaGAAACTGGGTAATAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YICLLQSILFYFLQTLCIGSTLL*KLGNKE Trigger: TTCCTTATTACCCAGTTTCCACAGCAGTGTGCTTCC...TATGCAGAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACTATTCCAACATATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTATTCCTTCAGACCCTCTaGATAGCTACTGAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: TTIPTYCIRYICLLQSILFLQTL*IATEEL Trigger: CAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA...TAGGATGCTCTGAAGTAAACATATGTACCGGATACAATATGTTGGAATAGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR-3UTR GCA 90 bp | TACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTGCATAAGTGTGGTAGTAGCCTaGTTAGTTTTCAAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: YICLLQSILFYFLQTLCISVVVA*LVFKFL Trigger: GAGAAATTTGAAAACTAAGCAGGCTACTACCACACT...TATGCAGAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR GCA 72 bp | CTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTaGATAGCTACTGAAGAACTGCTCACAGATAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LQSILFYFLQTL*IATEELLTDRA Trigger: TGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| 3UTR GCA 72 bp | TTTTGTTTTATGCGTAATAATTGGTGGGAAGCACACTaGTGTGGAAACTGGGTAATAAGGAATACATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: FCFMRNNWWEAH*CGNWVIRNTCL Trigger: AAGACATGTATTCCTTATTACCCAGTTTCCACAGCAGTGTGCTTCCCACCAATTATTACGCATAAAACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTAAGCAGAAAGGCACCTaGTGGCTTCATGGCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FLQTLCIATEELLTDRAFKQKGT*WLHGAE Trigger: CTCAGCGCCATGAAGCCAGCAGGTGCCTTTCTGCTT...AAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239465.2 |
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| CDS-3UTR TCA 90 bp | TACTTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTGCTGCAAAAAGCCTaGAAGCCTCCTTGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: YFLQTLCIATEELLTDRALLQKA*KPPWLT Trigger: TGTGAGCCAAGGAGGCTTTCAGGCTTTTTGCAGCAA...TGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR TCA 90 bp | ATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTCTGGGTCAGGTAAGTGTGTTGCTGCAAAAAGCCTaGAAGCCTCCTTGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: IATEELLTDRAFLGQVSVLLQKA*KPPWLT Trigger: TGTGAGCCAAGGAGGCTTTCAGGCTTTTTGCAGCAA...CACACTTACCTGACCCAGAAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR TCA 90 bp | ATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCGTGGGTCTTTGGGCATaGTTTTCCATCTGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IRYICLLQSILFYFLQTLVGLWA*FSIWGQ Trigger: CTGGCCCCAGATGGAAAATCATGCCCAAAGACCCAC...GAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CCA 90 bp | ATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTCTGGGTCAGGTAAGTGTGCTTTCCATGGCTGTTTaGCAGAATGCACAGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: IATEELLTDRAFLGQVSVLSMAV*QNAQRF Trigger: AAACCGCTGTGCATTCTGCCAAACAGCCATGGAAAG...CACACTTACCTGACCCAGAAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTTCTTCTCATAGTTGCTaGAAAAAGCCTGAAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FLQTLCIATEELLTDRAFSSHSC*KKPESL Trigger: GAGGCTTTCAGGCTTTTTGCAGCAACTATGAGAAGA...AAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR GCA 90 bp | GGGTCAGGTAAGTGTGGTAGTAGCCTGCTTAGTTTTCAAATTTCTCCTTTCATAGGCTGTTTGGCAGAATaGACAGCGGTTTTGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: GSGKCGSSLLSFQISPFIGCLAE*TAVLVG Trigger: ACCTACCAAAACCGCTGTGCATTCTGCCAAACAGCC...TATGAAAGGAGAAATTTGAAAACTAAGCAGGCTACTACCACACTTACCTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR TCA 90 bp | TATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGGTGGGTCTTTGGGCATaGTTTTCCATCTGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YCIRYICLLQSILFYFLQVGLWA*FSIWGQ Trigger: CTGGCCCCAGATGGAAAATCATGCCCAAAGACCCAC...CTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGATACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR TCA 90 bp | TTTTACTTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGAGAATCTTGAGGTCTaGGAACACAGAAATGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: FYFLQTLCIATEELLTDRENLEV*EHRNVR Trigger: CCTAACATTTCTGTGTTCTCAGACCTCAAGATTCTC...CCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239465.2 |
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| CDS-3UTR GCA 90 bp | TATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGGGCTGTTTGGCAGAATaGACAGCGGTTTTGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: YCIRYICLLQSILFYFLQGCLAE*TAVLVG Trigger: ACCTACCAAAACCGCTGTGCATTCTGCCAAACAGCC...CTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGATACAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CCA 90 bp | ACAACTATTCCAACATATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTACTTTCCATGGCTGTTTaGCAGAATGCACAGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TTIPTYCIRYICLLQSILLSMAV*QNAQRF Trigger: AAACCGCTGTGCATTCTGCCAAACAGCCATGGAAAG...TAGGATGCTCTGAAGTAAACATATGTACCGGATACAATATGTTGGAATAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR GCA 90 bp | TATTGTATCCGGTACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGTCTTCTCATAGTTGCTaGAAAAAGCCTGAAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: YCIRYICLLQSILFYFLQSSHSC*KKPESL Trigger: GAGGCTTTCAGGCTTTTTGCAGCAACTATGAGAAGA...CTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTACCGGATACAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTAGCCTGAAAGCCTCCTaGGCTCACAGCATCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: FLQTLCIATEELLTDRAFSLKAS*AHSIYR Trigger: TCTGTAGATGCTGTGAGCCAAGGAGGCTTTCAGGCT...AAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGGCATTTTCTTTCCATGGCTGTTaGGCAGAATGCACAGCGGTT | + |
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Preference number: 5 (lower is better) Translates to: FLQTLCIATEELLTDRAFSFHGC*AECTAV Trigger: AACCGCTGTGCATTCTGCCAAACAGCCATGGAAAGA...AAATGCCCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | GAAGAACTGCTCACAGATAGGGCATTTCTGGGTCAGGTAAGTGTGGTAGTAGCCCATTTCCCTTCATGTTaGAAACCAAGTTTCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: EELLTDRAFLGQVSVVVAHFPSC*KPSFPK Trigger: TTTGGGGAAACTTGGTTTCAAACATGAAGGGAAATG...GGCTACTACCACACTTACCTGACCCAGAAATGCCCTATCTGTGAGCAGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCAGGTAAGTGTGGTAGTAGCCTGCTTAGTTTTCAAATTTCTCCTTTCCAGGTTTGTGGGTCTTaGGGCATGATTTTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: SGSGKCGSSLLSFQISPFQVCGS*GMIFHL Trigger: CAGATGGAAAATCATGCCCAAAGACCCACAAACCTG...GAAAGGAGAAATTTGAAAACTAAGCAGGCTACTACCACACTTACCTGACCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | TACATATGTTTACTTCAGAGCATCCTATTTTACTTCCTTCAGACCCTCTGCATAAGCCTGAAAGCCTCCTaGGCTCACAGCATCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: YICLLQSILFYFLQTLCISLKAS*AHSIYR Trigger: TCTGTAGATGCTGTGAGCCAAGGAGGCTTTCAGGCT...TATGCAGAGGGTCTGAAGGAAGTAAAATAGGATGCTCTGAAGTAAACATATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | GGGTCAGGTAAGTGTGGTAGTAGCCTGCTTAGTTTTCAAATTTCTCCTTTCATACAGGTTTGTGGGTCTTaGGGCATGATTTTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: GSGKCGSSLLSFQISPFIQVCGS*GMIFHL Trigger: CAGATGGAAAATCATGCCCAAAGACCCACAAACCTG...TATGAAAGGAGAAATTTGAAAACTAAGCAGGCTACTACCACACTTACCTGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS-3UTR CAA 90 bp | TTTTACTTCCTTCAGACCCTCTGCATAGCTACTGAAGAACTGCTCACAGATAGGCATTTCCCTTCATGTTaGAAACCAAGTTTCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: FYFLQTLCIATEELLTDRHFPSC*KPSFPK Trigger: TTTGGGGAAACTTGGTTTCAAACATGAAGGGAAATG...CCTATCTGTGAGCAGTTCTTCAGTAGCTATGCAGAGGGTCTGAAGGAAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS TCA 72 bp | ATCAGTGCCACACACAGGTTTGTGGGTCTTTGGGCATaGTTTTCCATCTGGGGCCAGTGTCTTCTCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: ISATHRFVGLWA*FSIWGQCLLIV Trigger: AACTATGAGAAGACACTGGCCCCAGATGGAAAATCATGCCCAAAGACCCACAAACCTGTGTGTGGCACTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS CAA 72 bp | CTTCTCATAGTTGCTGCAAAAAGCCTGAAAGCCTCCTaGGCTCACAGCATCTACAGAGAGGAACAAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLIVAAKSLKAS*AHSIYREEQTG Trigger: GCCTGTTTGTTCCTCTCTGTAGATGCTGTGAGCCAAGGAGGCTTTCAGGCTTTTTGCAGCAACTATGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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| CDS GCA 72 bp | AGAATGCACAGCGGTTTTGGTAGGTTTTTCCATCAGTaGCACACACAGGTTTGTGGGTCTTTGGGCATGATT | + |
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Preference number: 6 (lower is better) Translates to: RMHSGFGRFFHQ*HTQVCGSLGMI Trigger: AATCATGCCCAAAGACCCACAAACCTGTGTGTGGCACTGATGGAAAAACCTACCAAAACCGCTGTGCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081271.7 ENSMUST00000239465.2 |
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