Pregenerated sensors for SPINK10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044176Ensembl transcript IDs: ENSMUST00000055725.12, ENSMUST00000162365.8, ENSMUST00000162511.3
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGAGGTGGGTCCCCATTCCAACCATCTCCTGGGACTGATGGGATaGCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGG | + |
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Preference number: 1 (lower is better) Translates to: PEVGPHSNHLLGLMG*LMSQRVYGGEDTTG Trigger: CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAGTCCCAGGAGATGGTTGGAATGGGGACCCACCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | GCAATGGGACTGGGCTGCCATCAAGGACTGTCTGAAAGAATTCTTTaGCTCTCCACTCCACAGGTATTAGAACTAGAAGGAGAGGCCCGA | + |
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Preference number: 1 (lower is better) Translates to: AMGLGCHQGLSERIL*LSTPQVLELEGEAR Trigger: TCGGGCCTCTCCTTCTAGTTCTAATACCTGTGGAGTGGAGAGCCAAAGAATTCTTTCAGACAGTCCTTGATGGCAGCCCAGTCCCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | CAATATTTGTCTGGTGATGCAGTGGGCTCTCTAATTCCTCAGAACTaGCTTGTTGGGTTGTCATGGGGTGTGTGTGGGAGCTTGGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: QYLSGDAVGSLIPQN*LVGLSWGVCGSLGH Trigger: ATGACCCAAGCTCCCACACACACCCCATGACAACCCAACAAGCCAGTTCTGAGGAATTAGAGAGCCCACTGCATCACCAGACAAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | ATTGGAGCAGCCCTGGAAGTTCACCAGGGCACTCTCCAAACACCTTaGTTGCTTCTCTTGACAAAGACTGACCTTGTATCCATCCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: IGAALEVHQGTLQTP*LLLLTKTDLVSIPE Trigger: TTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCAGGGCTGCTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | TGGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTTaGCAAAGACTGACCTTGTATCCATCCCAGAATGGGTTCCAAACT | + |
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Preference number: 1 (lower is better) Translates to: WKFTRALSKHLGCFS*QRLTLYPSQNGFQT Trigger: AGTTTGGAACCCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | CAACAAGGCCACAGCTCCTCATCCTTCCTCAAATGTTCTACCAACTaGGGACCAATAATTCAGACACATGAACCTATGAGCCTTTCACAC | + |
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Preference number: 1 (lower is better) Translates to: QQGHSSSSFLKCSTN*GPIIQTHEPMSLSH Trigger: GTGTGAAAGGCTCATAGGTTCATGTGTCTGAATTATTGGTCCCCAGTTGGTAGAACATTTGAGGAAGGATGAGGAGCTGTGGCCTTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | TGTGTGTGGGAGCTTGGGTCATTAGACAAAGAGAGGAAAGCTGATTaGTTCTTACCACAGAAGCTACCCACAAGAAAGGCCTACCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: CVWELGSLDKERKAD*FLPQKLPTRKAYQV Trigger: AACTTGGTAGGCCTTTCTTGTGGGTAGCTTCTGTGGTAAGAACCAATCAGCTTTCCTCTCTTTGTCTAATGACCCAAGCTCCCACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | CTTCCTCAAATGTTCTACCAACTGGGGACCAATAATTCAGACACATaGACCTATGAGCCTTTCACACTCAAACCACAGCAAAGGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LPQMFYQLGTNNSDT*TYEPFTLKPQQRPR Trigger: CCTTGGCCTTTGCTGTGGTTTGAGTGTGAAAGGCTCATAGGTTCATGTGTCTGAATTATTGGTCCCCAGTTGGTAGAACATTTGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | TGGTTCAGAGCTGAGACTAACTTCTCAGGAATCCTTAAAGAATGTTaGCCCAATCAATGCCCTCTTAGGCGATGTTATCTCCCACTAGTC | + |
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Preference number: 1 (lower is better) Translates to: WFRAETNFSGILKEC*PNQCPLRRCYLPLV Trigger: GACTAGTGGGAGATAACATCGCCTAAGAGGGCATTGATTGGGTCAACATTCTTTAAGGATTCCTGAGAAGTTAGTCTCAGCTCTGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | CAGGGAATAACAGTCCAAGAGAATTCTATGAGTCCCAGAAGAGGCTaGACTTCAAACATTGTTGGGACTGTGAAAGACTTTGGGGACTTT | + |
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Preference number: 1 (lower is better) Translates to: QGITVQENSMSPRRG*TSNIVGTVKDFGDF Trigger: AAAGTCCCCAAAGTCTTTCACAGTCCCAACAATGTTTGAAGTTCAGCCTCTTCTGGGACTCATAGAATTCTCTTGGACTGTTATTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR GCA 90 bp | TTTTGTGCAGTGTCACAGACACGGATCAACTTGCATCCTTTTATATaGAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: FCAVSQTRINLHPFI*KHPVRPALFVEDAV Trigger: GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGGATGCAAGTTGATCCGTGTCTGTGACACTGCACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | CCAAGTTCTTCCCAGGGGGAGATAAGACTCACCAAGTCTTTGCCTTaGAAAGAGGAAGATAATCAGGAAGATGGCCATCTTAAATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: PSSSQGEIRLTKSLP*KEEDNQEDGHLKCL Trigger: TAAACATTTAAGATGGCCATCTTCCTGATTATCTTCCTCTTTTCAAGGCAAAGACTTGGTGAGTCTTATCTCCCCCTGGGAAGAACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR GCA 90 bp | TGTCTTCAGTCTTCAGAGGGCTGGGCTTATAGGTGTGTGCCATCATaGTTGACTTTAAAAGTACACAAAGTGTATTCAAGGCTATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CLQSSEGWAYRCVPS*LTLKVHKVYSRLFL Trigger: CAGAAATAGCCTTGAATACACTTTGTGTACTTTTAAAGTCAAGCATGATGGCACACACCTATAAGCCCAGCCCTCTGAAGACTGAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | TTCTCTTCTATTAGATTTGGTGTATCTGGTTTTATGTTGACGTCTTaGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGA | + |
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Preference number: 1 (lower is better) Translates to: FSSIRFGVSGFMLTS*IHEDLSFVQCHRHG Trigger: TCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCAAGACGTCAACATAAAACCAGATACACCAAATCTAATAGAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CCA 90 bp | TCTAAGCTCTTCCCAAATTTACATTGTCTTCAGTCTTCAGAGGGCTaGGCTTATAGGTGTGTGCCATCATGCTTGACTTTAAAAGTACAC | + |
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Preference number: 1 (lower is better) Translates to: SKLFPNLHCLQSSEG*AYRCVPSCLTLKVH Trigger: GTGTACTTTTAAAGTCAAGCATGATGGCACACACCTATAAGCCCAGCCCTCTGAAGACTGAAGACAATGTAAATTTGGGAAGAGCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR TCA 90 bp | TTCAACACACAAGCCTGGAAATCTCATTGGGTCTTCAGTATATGTTaGAATTTCAAAGAAGTAGACCTTAACACCAGAGAAGTAATGCCT | + |
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Preference number: 1 (lower is better) Translates to: FNTQAWKSHWVFSIC*NFKEVDLNTREVMP Trigger: AGGCATTACTTCTCTGGTGTTAAGGTCTACTTCTTTGAAATTTCAACATATACTGAAGACCCAATGAGATTTCCAGGCTTGTGTGTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR GCA 90 bp | ATCCATCCCAGAATGGGTTCCAAACTGATTATATCATGGCGGGGTTaGCTAGAAACAGAGTCTTTTACTTTACTGATTTACAGAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: IHPRMGSKLIISWRG*LETESFTLLIYRIK Trigger: TTTTATTCTGTAAATCAGTAAAGTAAAAGACTCTGTTTCTAGGCAACCCCGCCATGATATAATCAGTTTGGAACCCATTCTGGGATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | GTAGCCTCTCGGCCAGGGCTGCCTCCTGGTAGGCTACAGCTCTTCTaGTTCCTTGTCCTGCTCGCCCCTCTCATGGTCCGGTTTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VASRPGLPPGRLQLF*FLVLLAPLMVRFSQ Trigger: CTGACTAAACCGGACCATGAGAGGGGCGAGCAGGACAAGGAACAAGAAGAGCTGTAGCCTACCAGGAGGCAGCCCTGGCCGAGAGGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR GCA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGGCAAGCTGCAGCTCCTaGTCTGGTGGCTGCCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGASCSS*SGGCRR Trigger: TCTGCGGCAGCCACCAGAGCAGGAGCTGCAGCTTGC...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | GCGTGTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTGAAGTCCGGATTGCTTGTTGGGTTGTCATaGGGTGTGTGTGGGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: ACGRRASHMEAREVKSGLLVGLS*GVCGSL Trigger: CAAGCTCCCACACACACCCCATGACAACCCAACAAG...CAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCACACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | GCGTGTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTGAAGTCCGGATTGGCTCCTGGGATGAATTaGGACTGTCACTATCATACA | + |
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Preference number: 2 (lower is better) Translates to: ACGRRASHMEAREVKSGLAPGMN*DCHYHT Trigger: TGTATGATAGTGACAGTCTCAATTCATCCCAGGAGC...CAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCACACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | GCGTGTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTGAAGTCCGGATTGACATTGTTGGGACTGTaGAAGACTTTGGGGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: ACGRRASHMEAREVKSGLTLLGL*KTLGTL Trigger: CAAAGTCCCCAAAGTCTTTCACAGTCCCAACAATGT...CAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCACACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCGTGAGGCCCAGCGTGTaGCAGAAGAGCCTCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCVRPSV*QKSLPH Trigger: ATGTGGGAGGCTCTTCTGCCACACGCTGGGCCTCAC...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | CTAGAGTTCACCCATCACCACCTCCTTTCCCCACACTCCAAGATATaGGAGCAGCCCTGGAAGTTCACCAGGGCACTCTCCAAACACCTT | + |
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Preference number: 2 (lower is better) Translates to: LEFTHHHLLSPHSKI*EQPWKFTRALSKHL Trigger: AAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCAGGGCTGCTCCAATATCTTGGAGTGTGGGGAAAGGAGGTGGTGATGGGTGAACTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | GGAGCAGCCCTGGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTaGCTTCTCTTGACAAAGACTGACCTTGTATCCATCCCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: GAALEVHQGTLQTPW*LLLTKTDLVSIPEW Trigger: CCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCAGGGCTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | CACTCCTTTAGATGCAGGCAATGTGTCTTTCTGGCCCCACAACCCTaGACCCTTGATCTGAGACATGCATCCTTCCAGCATCTGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSFRCRQCVFLAPQP*TLDLRHASFQHLGQ Trigger: CTGACCCAGATGCTGGAAGGATGCATGTCTCAGATCAAGGGTCAAGGGTTGTGGGGCCAGAAAGACACATTGCCTGCATCTAAAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | ACCCTGTATCTCATGATATCCTGGCTGGGACCTTGTCTTACAGGGTaGGGGCTTGCAAGAGACTGTAAACCCCCACTAGTAGCAGACCGA | + |
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Preference number: 2 (lower is better) Translates to: TLYLMISWLGPCLTG*GLARDCKPPLVADR Trigger: TCGGTCTGCTACTAGTGGGGGTTTACAGTCTCTTGCAAGCCCCAACCCTGTAAGACAAGGTCCCAGCCAGGATATCATGAGATACAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGAAGGGTGTGGGCTTTTaGAATCTTAAAGCTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGKGVGF*NLKAHP Trigger: GGGGTGAGCTTTAAGATTTCAAAAGCCCACACCCTT...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCCAGAGTAAGAGTCCATaGCCAATGATGGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCQSKSP*PMMGWG Trigger: CCCCCACCCCATCATTGGCCATGGACTCTTACTCTG...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | TCAAAGCTCTGCCGGCAGATGGCGCTGTTCTACAAGCGCCACCATTaGCTCCTGTGCCCTTACAGAGGTTATACCAAGTCTCTGAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SKLCRQMALFYKRHH*LLCPYRGYTKSLKN Trigger: GTTTTTCAGAGACTTGGTATAACCTCTGTAAGGGCACAGGAGCAAATGGTGGCGCTTGTAGAACAGCGCCATCTGCCGGCAGAGCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | CTGGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTaGACAAAGACTGACCTTGTATCCATCCCAGAATGGGTTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LEVHQGTLQTPWLLL*TKTDLVSIPEWVPN Trigger: GTTTGGAACCCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGACCAAGTCTTTGCCTTaGAAAGAGGAAGATAATCAG | + |
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Preference number: 2 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGTKSLP*KEEDNQ Trigger: CTGATTATCTTCCTCTTTTCAAGGCAAAGACTTGGT...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR GCA 90 bp | GAAGTGTCCTGTGGCAGAGGAAGCAGGATTAGAGACTCAGGAAAAGGAAGGCATTTCCCTCACCATGCCTaGCTTTGCTTGCTTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: EVSCGRGSRIRDSGKGRHFPHHA*LCLLLL Trigger: CAAAAGAAGCAAGCAAAGGCAGGCATGGTGAGGGAA...ATGCCTTCCTTTTCCTGAGTCTCTAATCCTGCTTCCTCTGCCACAGGACACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTTGACAAAGACCTAATTCCTCAGAACTaGCTTGTTGGGTTGTCATGG | + |
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Preference number: 2 (lower is better) Translates to: GSSPGHSPNTLVASLDKDLIPQN*LVGLSW Trigger: CCATGACAACCCAACAAGCCAGTTCTGAGGAATTAG...GTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTGACTGTGAAAGACTTTaGGGACTTTGGAAGTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SWIHEDLSFVQCHRHGSTDCERL*GLWKLD Trigger: GTCCAACTTCCAAAGTCCCCAAAGTCTTTCACAGTC...AGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCATCCTTAAAGAATGTTaGCCCAATCAATGCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCILKEC*PNQCPL Trigger: AAGAGGGCATTGATTGGGTCAACATTCTTTAAGGAT...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAAAGGACAAAGAAGTGAAGGGGTTGTGGAATTTTGCTCCGCACTTAAGGCCTGTCAGGTTTCTCTaGTTCAGAGCTGAGACTAAC | + |
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Preference number: 2 (lower is better) Translates to: RRKDKEVKGLWNFAPHLRPVRFL*FRAETN Trigger: GTTAGTCTCAGCTCTGAACCAGAGAAACCTGACAGG...CCTTAAGTGCGGAGCAAAATTCCACAACCCCTTCACTTCTTTGTCCTTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | CCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTaGCATCCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PRGLEFCAVSQTRIN*HPFICKHPVRPALF Trigger: AAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGGATGCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAAAGGACAAAGAAGTGAAGGGGTTGTGGAATTTTGCTCCGCACTTAAGGTCTCTTGACAAAGACTaGCCTTGTATCCATCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RRKDKEVKGLWNFAPHLRSLDKD*PCIHPR Trigger: TCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGA...CCTTAAGTGCGGAGCAAAATTCCACAACCCCTTCACTTCTTTGTCCTTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCAGTCCCAGAAGAGGCTaGACTTCAAACATTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PFICKHPVRPALFVEDAVSPRRG*TSNIVG Trigger: CCCAACAATGTTTGAAGTTCAGCCTCTTCTGGGACT...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR GCA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCCCCTTTCCTCCGTTTTaGAAAAGTAGTATTTATCCT | + |
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Preference number: 2 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCPFPPF*KSSIYP Trigger: AGGATAAATACTACTTTTGCAAAACGGAGGAAAGGG...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | TTTACAGGGAATAACAGTCCAAGAGAATTCTATGAGTCCCAGAAGAGGCTGAACGAGGTGTGTTCTTGTTaGAGACAGAATGTCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: FTGNNSPREFYESQKRLNEVCSC*RQNVTG Trigger: CCCTGTGACATTCTGTCTCCAACAAGAACACACCTC...GTTCAGCCTCTTCTGGGACTCATAGAATTCTCTTGGACTGTTATTCCCTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR GCA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCAACATTCTACTTGATTaGCAAATCCACCATGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCNILLD*QIHHEK Trigger: CTTTTCATGGTGGATTTGGCAATCAAGTAGAATGTT...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGTCCTGTGGCAGAGGAAGCAGGATTAGAGACTCAGGAAAAGGAAGGCATTTTTGTAATATGATATaGCTACAAGTCTATGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: EVSCGRGSRIRDSGKGRHFCNMI*LQVYGH Trigger: GTGCCCATAGACTTGTAGCCATATCATATTACAAAA...ATGCCTTCCTTTTCCTGAGTCTCTAATCCTGCTTCCTCTGCCACAGGACACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR CAA 90 bp | CTTCAGTCTTCAGAGGGCTGGGCTTATAGGTGTGTGCCATCATGCTaGACTTTAAAAGTACACAAAGTGTATTCAAGGCTATTTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: LQSSEGWAYRCVPSC*TLKVHKVYSRLFLT Trigger: AGTCAGAAATAGCCTTGAATACACTTTGTGTACTTTTAAAGTCAAGCATGATGGCACACACCTATAAGCCCAGCCCTCTGAAGACTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTTCTTTCCTGTCTGTTTGTCTACCAGGAATCTATTCAGCTCCTAGGCTCGTGAACGATATTTTCTaGAAAGGAGCTGTCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SFSFLSVCLPGIYSAPRLVNDIF*KGAVST Trigger: TGTAGAGACAGCTCCTTTCCAGAAAATATCGTTCAC...GAGCCTAGGAGCTGAATAGATTCCTGGTAGACAAACAGACAGGAAAGAAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCTTGGAGACCCCAAGATaGTTTAAAAGATGCCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PFICKHPVRPALFVEDAVLETPR*FKRCQS Trigger: ACTCTGGCATCTTTTAAACCATCTTGGGGTCTCCAA...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCTTACTTTTGTTGTTGTaGCCAAAGCACCATGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: PFICKHPVRPALFVEDAVLLLLL*PKHHDS Trigger: TGAGTCATGGTGCTTTGGTCACAACAACAAAAGTAA...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTTCTTTCCTGTCTGTTTGTCTACCAGGAATCTATTCAGCTCCTAGGCTCGATCTGTGCTTGCAATaGATACTCACATCATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SFSFLSVCLPGIYSAPRLDLCLQ*ILTSCF Trigger: AAAACATGATGTGAGTATTCATTGCAAGCACAGATC...GAGCCTAGGAGCTGAATAGATTCCTGGTAGACAAACAGACAGGAAAGAAAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCTTTGCTTGCTTCTTTTaGAACCTCATGGAACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PFICKHPVRPALFVEDAVFACFF*NLMEQR Trigger: CCTTTGTTCCATGAGGTTTCAAAAGAAGCAAGCAAA...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 90 bp | TATCCATCCCAGAATGGGTTCCAAACTGATTATATCATGGCGGGGTaGCCTAGAAACAGAGTCTTTTACTTTACTGATTTACAGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: YPSQNGFQTDYIMAG*PRNRVFYFTDLQNK Trigger: TTTATTCTGTAAATCAGTAAAGTAAAAGACTCTGTTTCTAGGCAACCCCGCCATGATATAATCAGTTTGGAACCCATTCTGGGATGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CCA 90 bp | GTGTATACTAAATACAGATTTCAAAGCCCTTCCTACAATGGGGGAGTTACTGCTAATTTATGTAGTTTCTaGCTTCATAAGAAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VYTKYRFQSPSYNGGVTANLCSF*LHKKPE Trigger: CTCTGGCTTCTTATGAAGCCAGAAACTACATAAATT...AGCAGTAACTCCCCCATTGTAGGAAGGGCTTTGAAATCTGTATTTAGTATACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR GCA 90 bp | TATCCTGTATTCCACTTTATTACCCACAGAAAGTTTCCCTTGCTGTCTAGGAATAACATTCTACTTGATTaGCAAATCCACCATGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YPVFHFITHRKFPLLSRNNILLD*QIHHEK Trigger: CTTTTCATGGTGGATTTGGCAATCAAGTAGAATGTT...ATTCCTAGACAGCAAGGGAAACTTTCTGTGGGTAATAAAGTGGAATACAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| 3UTR GCA 72 bp | AAGACACTACTGGGTTACGGCGCAAGCTGCAGCTCCTaGTCTGGTGGCTGCCGCAGAGCCACCGAGCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: KTLLGYGASCSS*SGGCRRATEHP Trigger: AGGGTGCTCGGTGGCTCTGCGGCAGCCACCAGAGCAGGAGCTGCAGCTTGCGCCGTAACCCAGTAGTGTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | ACTGGGTTACGGCGCAAGCTGCAGCTCCTGCTCTGGTaGCTGCCGCAGAGCCACCGAGCACCCTGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGLRRKLQLLLW*LPQSHRAPCIS Trigger: TGAGATACAGGGTGCTCGGTGGCTCTGCGGCAGCCACCAGAGCAGGAGCTGCAGCTTGCGCCGTAACCCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | ACTACTGGGTTACGGCGCAAGCTGCAGCTCCTGCTCTaGTGGCTGCCGCAGAGCCACCGAGCACCCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: TTGLRRKLQLLL*WLPQSHRAPCI Trigger: GATACAGGGTGCTCGGTGGCTCTGCGGCAGCCACCAGAGCAGGAGCTGCAGCTTGCGCCGTAACCCAGTAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | GATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTaGGTTACGGCGCAAGCTGCAGCTCCTGCTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DVSEGLRRGRHY*VTAQAAAPALV Trigger: CACCAGAGCAGGAGCTGCAGCTTGCGCCGTAACCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | GTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTaGAGTCCGGATTGTGTTGGAGACCCCAAGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VAEEPPTWRLGR*SPDCVGDPKMV Trigger: AACCATCTTGGGGTCTCCAACACAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | GGTCCCCATTCCAACCATCTCCTGGGACTGATGGGATaGCTGATGTCTCAGAGGGTTTACGGAGGGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPHSNHLLGLMG*LMSQRVYGGED Trigger: GTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAGTCCCAGGAGATGGTTGGAATGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | GCCGGCAGATGGCGCTGTTCTACAAGCGCCACCATTTaGTCCTGTGCCCTTACAGAGGTTATACCAAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGRWRCSTSATI*SCALTEVIPSL Trigger: GAGACTTGGTATAACCTCTGTAAGGGCACAGGAGCAAATGGTGGCGCTTGTAGAACAGCGCCATCTGCCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTGAAGTCCGGATTGCCTTGGTTGCTTCTCTaGACAAAGACTGACCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ACGRRASHMEAREVKSGLPWLLL*TKTDLV Trigger: TACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGG...CAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCACACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | TGCAGTGGGCTCTCTAATTCCTCAGAACTGGCTTGTTaGGTTGTCATGGGGTGTGTGTGGGAGCTTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSGLSNSSELAC*VVMGCVWELGS Trigger: TGACCCAAGCTCCCACACACACCCCATGACAACCCAACAAGCCAGTTCTGAGGAATTAGAGAGCCCACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | TCTGGTGATGCAGTGGGCTCTCTAATTCCTCAGAACTaGCTTGTTGGGTTGTCATGGGGTGTGTGTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGDAVGSLIPQN*LVGLSWGVCGS Trigger: GCTCCCACACACACCCCATGACAACCCAACAAGCCAGTTCTGAGGAATTAGAGAGCCCACTGCATCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | CTCCTTTCCCCACACTCCAAGATATTGGAGCAGCCCTaGAAGTTCACCAGGGCACTCTCCAAACACCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLSPHSKILEQP*KFTRALSKHLG Trigger: ACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCCAGGGCTGCTCCAATATCTTGGAGTGTGGGGAAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGTGGCAGAAGAGCCTCCCACATGGAGGCTAGGGAGGTGAAGTCCGGATTGAAGGAAGCATTTAACTaGGGGCTTTGCTTACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ACGRRASHMEAREVKSGLKEAFN*GLCLQL Trigger: CAACTGTAAGCAAAGCCCCAAGTTAAATGCTTCCTT...CAATCCGGACTTCACCTCCCTAGCCTCCATGTGGGAGGCTCTTCTGCCACACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | GCAATGTGTCTTTCTGGCCCCACAACCCTTGACCCTTaGTCTGAGACATGCATCCTTCCAGCATCTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AMCLSGPTTLDP*SETCILPASGS Trigger: TGACCCAGATGCTGGAAGGATGCATGTCTCAGATCAAGGGTCAAGGGTTGTGGGGCCAGAAAGACACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGATATCCATCCATGTCTaGCCCACCTCTGTTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGISIHV*PTSVPE Trigger: TTCTGGAACAGAGGTGGGCAAGACATGGATGGATAT...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGGAAGGAGGTGTTTTCTaGCTAGCCTTTCATAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGEGGVF*LAFHRE Trigger: CTCTCTATGAAAGGCTAGCAAGAAAACACCTCCTTC...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | CACATGGAGGCTAGGGAGGTGAAGTCCGGATTGTGTTaGAGACCCCAAGATGGTTTAAAAGATGCCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: HMEAREVKSGLC*RPQDGLKDARV Trigger: GACTCTGGCATCTTTTAAACCATCTTGGGGTCTCCAACACAATCCGGACTTCACCTCCCTAGCCTCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGGGATGCCTGATGTCTCAGAGGGTTTACGGAGGGGAAGACACTACTGGGCACAGAAAGTTTCCCTaGCTGTCTAGGAATTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LMGCLMSQRVYGGEDTTGHRKFP*LSRNFQ Trigger: CTGAAAATTCCTAGACAGCAAGGGAAACTTTCTGTG...CCCAGTAGTGTCTTCCCCTCCGTAAACCCTCTGAGACATCAGGCATCCCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTCCACACTCCAAGATATaGGAGCAGCCCTGGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SWIHEDLSFVQCHRHGSTPHSKI*EQPWKF Trigger: GAACTTCCAGGGCTGCTCCAATATCTTGGAGTGTGG...AGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | ACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTTaGCAAAGACTGACCTTGTATCCATCCCAGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: TRALSKHLGCFS*QRLTLYPSQNG Trigger: CCCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | TCTGGCTTCATAAGAAGCCAGAGTGCAGGAGCTAACTaGAGGAAGTCATCAATTTCAGGCAATGGGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGFIRSQSAGAN*RKSSISGNGTG Trigger: CCCAGTCCCATTGCCTGAAATTGATGACTTCCTGCAGTTAGCTCCTGCACTCTGGCTTCTTATGAAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | CAGATTTCAAAGCCCTTCCTACAATGGGGGAGTTACTaGTTAACCATTACCGCGGCAAGTCCCCACCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: QISKPFLQWGSY*LTITAASPHHQ Trigger: TTGATGGTGGGGACTTGCCGCGGTAATGGTTAAGCAGTAACTCCCCCATTGTAGGAAGGGCTTTGAAATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | TCAGAACTGGCTTGTTGGGTTGTCATGGGGTGTGTGTaGGAGCTTGGGTCATTAGACAAAGAGAGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SELACWVVMGCV*ELGSLDKERKA Trigger: AGCTTTCCTCTCTTTGTCTAATGACCCAAGCTCCCACACACACCCCATGACAACCCAACAAGCCAGTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | GCAGGAAGTCATCAATTTCAGGCAATGGGACTGGGCTaGCATCAAGGACTGTCTGAAAGAATTCTTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGSHQFQAMGLG*HQGLSERILWL Trigger: GAGCCAAAGAATTCTTTCAGACAGTCCTTGATGGCAGCCCAGTCCCATTGCCTGAAATTGATGACTTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCCCTTGTCTTACAGGGTaGGGGCTTGCAAGAGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: PFICKHPVRPALFVEDAVPCLTG*GLARDC Trigger: ACAGTCTCTTGCAAGCCCCAACCCTGTAAGACAAGG...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | CTGGGCTGCCATCAAGGACTGTCTGAAAGAATTCTTTaGCTCTCCACTCCACAGGTATTAGAACTAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGCHQGLSERIL*LSTPQVLELEG Trigger: TCCTTCTAGTTCTAATACCTGTGGAGTGGAGAGCCAAAGAATTCTTTCAGACAGTCCTTGATGGCAGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | GTGGGAGCTTGGGTCATTAGACAAAGAGAGGAAAGCTaGTTGGTTCTTACCACAGAAGCTACCCACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGAWVIRQREES*LVLTTEATHKK Trigger: TTTCTTGTGGGTAGCTTCTGTGGTAAGAACCAATCAGCTTTCCTCTCTTTGTCTAATGACCCAAGCTCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | TCTCCAAACACCTTGGTTGCTTCTCTTGACAAAGACTaGCCTTGTATCCATCCCAGAATGGGTTCCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SPNTLVASLDKD*PCIHPRMGSKL Trigger: CAGTTTGGAACCCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | CACAGCTCCTCATCCTTCCTCAAATGTTCTACCAACTaGGGACCAATAATTCAGACACATGAACCTATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSSSSFLKCSTN*GPIIQTHEPMS Trigger: GCTCATAGGTTCATGTGTCTGAATTATTGGTCCCCAGTTGGTAGAACATTTGAGGAAGGATGAGGAGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTTGTGGAAGATGCTGTCTCACCATGCCTGCCTTaGCTTGCTTCTTTTGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PFICKHPVRPALFVEDAVSPCLP*LASFET Trigger: GGTTTCAAAAGAAGCAAGCAAAGGCAGGCATGGTGA...GACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | TATGAGTCCCAGAAGAGGCTGAACTTCAAACATTGTTaGGACTGTGAAAGACTTTGGGGACTTTGGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YESQKRLNFKHC*DCERLWGLWKL Trigger: CAACTTCCAAAGTCCCCAAAGTCTTTCACAGTCCCAACAATGTTTGAAGTTCAGCCTCTTCTGGGACTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAACTGATTATATCATGGCGGGGTTGCCTAGAAACAGAGTCTTTTACTTTGGGCTTTGCTTACAGTaGCAGAGTAAGAGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: FQTDYIMAGLPRNRVFYFGLCLQ*QSKSPW Trigger: CCATGGACTCTTACTCTGCAACTGTAAGCAAAGCCC...AAAGTAAAAGACTCTGTTTCTAGGCAACCCCGCCATGATATAATCAGTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAGGGAATAACAGTCCAAGAGAATTCTATGAGTCCCAGAAGAGGCTGAACCTCCAAACACCTTGGTaGCTTCTCTTGACAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FTGNNSPREFYESQKRLNLQTPW*LLLTKT Trigger: AGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAG...GTTCAGCCTCTTCTGGGACTCATAGAATTCTCTTGGACTGTTATTCCCTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGTATACTAAATACAGATTTCAAAGCCCTTCCTACAATGGGGGAGTTACTGCTGTCACAGGGGTGGGCTaGACATTTAAAAATCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VYTKYRFQSPSYNGGVTAVTGVG*TFKNPM Trigger: CATGGGATTTTTAAATGTCAAGCCCACCCCTGTGAC...AGCAGTAACTCCCCCATTGTAGGAAGGGCTTTGAAATCTGTATTTAGTATACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | GCTGAGACTAACTTCTCAGGAATCCTTAAAGAATGTTaGCCCAATCAATGCCCTCTTAGGCGATGTTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: AETNFSGILKEC*PNQCPLRRCYL Trigger: GAGATAACATCGCCTAAGAGGGCATTGATTGGGTCAACATTCTTTAAGGATTCCTGAGAAGTTAGTCTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGCTGAACTTCAAACATTGTTGGGACTGTaGAAGACTTTGGGGACTTTGGAAGTTGGACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PEEAELQTLLGL*KTLGTLEVGLN Trigger: ATTTAGTCCAACTTCCAAAGTCCCCAAAGTCTTTCACAGTCCCAACAATGTTTGAAGTTCAGCCTCTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | GTGTCACAGACACGGATCAACTTGCATCCTTTTATATaGAAACATCCAGTTAGACCAGCACTGTTTGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSQTRINLHPFI*KHPVRPALFVE Trigger: TTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAGGATGCAAGTTGATCCGTGTCTGTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | TCTTCAGAGGGCTGGGCTTATAGGTGTGTGCCATCATaGTTGACTTTAAAAGTACACAAAGTGTATTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSEGWAYRCVPS*LTLKVHKVYSR Trigger: CCTTGAATACACTTTGTGTACTTTTAAAGTCAAGCATGATGGCACACACCTATAAGCCCAGCCCTCTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | CCAGCACAAAAACCAAGAGTGTCATCGGACAGAATCTaGGGCTTTCTTAGTTACTTTTGTTGTTGTGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PAQKPRVSSDRI*GFLSYFCCCDQ Trigger: TTGGTCACAACAACAAAAGTAACTAAGAAAGCCTCAGATTCTGTCCGATGACACTCTTGGTTTTTGTGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | TTCTGGAAAGGAGCTGTCTCTACAATACTGATTAACTaGCTACAACAGTGTGTGGAGAGACTGAACTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FWKGAVSTILIN*LQQCVERLNCY Trigger: ATAGCAGTTCAGTCTCTCCACACACTGTTGTAGTCAGTTAATCAGTATTGTAGAGACAGCTCCTTTCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | ACAGTCCAAGAGAATTCTATGAGTCCCAGAAGAGGCTaGACTTCAAACATTGTTGGGACTGTGAAAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TVQENSMSPRRG*TSNIVGTVKDF Trigger: AAAGTCTTTCACAGTCCCAACAATGTTTGAAGTTCAGCCTCTTCTGGGACTCATAGAATTCTCTTGGACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR GCA 72 bp | TTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTaGATCCTTTTATATGCAAACATCCAGTTAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSFVQCHRHGST*ILLYANIQLDQ Trigger: CTGGTCTAACTGGATGTTTGCATATAAAAGGATGCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | ATCCATCCCAGAATGGGTTCCAAACTGATTATATCATaGCGGGGTTGCCTAGAAACAGAGTCTTTTACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IHPRMGSKLIIS*RGCLETESFTL Trigger: TAAAGTAAAAGACTCTGTTTCTAGGCAACCCCGCCATGATATAATCAGTTTGGAACCCATTCTGGGATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR TCA 72 bp | AGAAAGTTTCCCTTGCTGTCTAGGAATTTTCAGCATTaGTTGAGAACATTCTACTTGATTGCCAAATCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RKFPLLSRNFQH*LRTFYLIAKST Trigger: GGTGGATTTGGCAATCAAGTAGAATGTTCTCAATCAATGCTGAAAATTCCTAGACAGCAAGGGAAACTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| 3UTR TCA 72 bp | CCTTTTAAAGGAGAAATCGTAACCGTTCCCTTGTTCTaGGTAGGATTCAAAACTTCTTTCTTCATGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PFKGEIVTVPLF*VGFKTSFFMRK Trigger: CTTTCTCATGAAGAAAGAAGTTTTGAATCCTACTCAGAACAAGGGAACGGTTACGATTTCTCCTTTAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CCA 72 bp | TTGGAAGTTGGACTAAATTCATTTTGTAATATGATATaGCTACAAGTCTATGGGCACCAGAGAGTGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LEVGLNSFCNMI*LQVYGHQRVEY Trigger: ATATTCCACTCTCTGGTGCCCATAGACTTGTAGCCATATCATATTACAAAATGAATTTAGTCCAACTTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | CGGCCAGGGCTGCCTCCTGGTAGGCTACAGCTCTTCTaGTTCCTTGTCCTGCTCGCCCCTCTCATGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGLPPGRLQLF*FLVLLAPLMVR Trigger: CCGGACCATGAGAGGGGCGAGCAGGACAAGGAACAAGAAGAGCTGTAGCCTACCAGGAGGCAGCCCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | GGCTGCCTCCTGGTAGGCTACAGCTCTTCTTGTTCCTaGTCCTGCTCGCCCCTCTCATGGTCCGGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLLVGYSSSCS*SCSPLSWSGLV Trigger: GACTAAACCGGACCATGAGAGGGGCGAGCAGGACAAGGAACAAGAAGAGCTGTAGCCTACCAGGAGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | TGCCGGCAGATGGCGCTGTTCTACAAGCGCCACCATTaGCTCCTGTGCCCTTACAGAGGTTATACCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRQMALFYKRHH*LLCPYRGYTKS Trigger: AGACTTGGTATAACCTCTGTAAGGGCACAGGAGCAAATGGTGGCGCTTGTAGAACAGCGCCATCTGCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | AGATGCAGGCAATGTGTCTTTCTGGCCCCACAACCCTaGACCCTTGATCTGAGACATGCATCCTTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCRQCVFLAPQP*TLDLRHASFQH Trigger: ATGCTGGAAGGATGCATGTCTCAGATCAAGGGTCAAGGGTTGTGGGGCCAGAAAGACACATTGCCTGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | CTCATGATATCCTGGCTGGGACCTTGTCTTACAGGGTaGGGGCTTGCAAGAGACTGTAAACCCCCACTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMISWLGPCLTG*GLARDCKPPLV Trigger: TACTAGTGGGGGTTTACAGTCTCTTGCAAGCCCCAACCCTGTAAGACAAGGTCCCAGCCAGGATATCATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | CACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTaGACAAAGACTGACCTTGTATCCATCCCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGTLQTPWLLL*TKTDLVSIPEW Trigger: CCATTCTGGGATGGATACAAGGTCAGTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTCCTGTGGCAGAGGAAGCAGGATTAGAGACTCAGGAAAAGGAAGGCATCAAGTCTCAGTGCCTTaGAGAAAGTACATTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSCGRGSRIRDSGKGRHQVSVP*RKYIYC Trigger: GCAATAAATGTACTTTCTGCAAGGCACTGAGACTTG...ATGCCTTCCTTTTCCTGAGTCTCTAATCCTGCTTCCTCTGCCACAGGACACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTTGACAAAGACTTTAGCAGCTATCTTTaGGTTGCAGAAAACACACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGHSPNTLVASLDKDFSSYL*VAENTL Trigger: GAGTGTGTTTTCTGCAACGCAAAGATAGCTGCTAAA...GTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CCA 90 bp | AGCTTTTCTTTCCTGTCTGTTTGTCTACCAGGAATCTATTCAGCTCCTAGGCTCCTGGGTTCCATTCTCTaGTACACTGGTTTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSFLSVCLPGIYSAPRLLGSIL*YTGLGM Trigger: CATTCCCAAACCAGTGTACCAGAGAATGGAACCCAG...GAGCCTAGGAGCTGAATAGATTCCTGGTAGACAAACAGACAGGAAAGAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CCA 90 bp | TACTTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTCTGGGTTCCATTCTCTaGTACACTGGTTTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: YLIAKSTMKRDSHRTRNILGSIL*YTGLGM Trigger: CATTCCCAAACCAGTGTACCAGAGAATGGAACCCAG...AATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| 3UTR CAA 72 bp | TCTGGTTTTATGTTGACGTCTTGGATCCACGAGGACTaGAGTTTTGTGCAGTGTCACAGACACGGATCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGFMLTSWIHED*SFVQCHRHGST Trigger: AGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCAAGACGTCAACATAAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CCA 90 bp | CAATATCCTGTATTCCACTTTATTACCCACAGAAAGTTTCCCTTGCTGTCTAGGCTGGGTTCCATTCTCTaGTACACTGGTTTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QYPVFHFITHRKFPLLSRLGSIL*YTGLGM Trigger: CATTCCCAAACCAGTGTACCAGAGAATGGAACCCAG...CCTAGACAGCAAGGGAAACTTTCTGTGGGTAATAAAGTGGAATACAGGATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| 3UTR CAA 72 bp | TCAGAGGGCTGGGCTTATAGGTGTGTGCCATCATGCTaGACTTTAAAAGTACACAAAGTGTATTCAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SEGWAYRCVPSC*TLKVHKVYSRL Trigger: TAGCCTTGAATACACTTTGTGTACTTTTAAAGTCAAGCATGATGGCACACACCTATAAGCCCAGCCCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR TCA 90 bp | AATGGAAGGGTGTGGGCTTTTGAAATCTTAAAGCTCACCCCAAGTGACACATCTAGTTTTTCCGCTAGTTaGACATACAGGATGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: NGRVWAFEILKLTPSDTSSFSAS*TYRMIL Trigger: GAGTATCATCCTGTATGTTCAACTAGCGGAAAAACT...AGATGTGTCACTTGGGGTGAGCTTTAAGATTTCAAAAGCCCACACCCTTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR GCA 90 bp | TTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTGTATTTAGCAGCTATCTTTaGGTTGCAGAAAACACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIAKSTMKRDSHRTRNIVFSSYL*VAENTL Trigger: GAGTGTGTTTTCTGCAACGCAAAGATAGCTGCTAAA...TACAATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| 3UTR CAA 72 bp | CAAGTCTATGGGCACCAGAGAGTGGAATATGGTAATTaGAATAAGAATTGCCCTTGTGGGCTCATGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVYGHQRVEYGN*NKNCPCGLMYL Trigger: CAAATACATGAGCCCACAAGGGCAATTCTTATTCAAATTACCATATTCCACTCTCTGGTGCCCATAGACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR GCA 90 bp | TTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTGTATGTATCAAGTCTCAGTaGCTTGCAGAAAGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: LIAKSTMKRDSHRTRNIVCIKSQ*LAESTF Trigger: AAATGTACTTTCTGCAAGGCACTGAGACTTGATACA...TACAATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| CDS-3UTR TCA 90 bp | TATCCTGTATTCCACTTTATTACCCACAGAAAGTTTCCCTTGCTGTCTAGGAATAGTTTTTCCGCTAGTTaGACATACAGGATGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: YPVFHFITHRKFPLLSRNSFSAS*TYRMIL Trigger: GAGTATCATCCTGTATGTTCAACTAGCGGAAAAACT...ATTCCTAGACAGCAAGGGAAACTTTCTGTGGGTAATAAAGTGGAATACAGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| CDS-3UTR GCA 90 bp | TATCCTGTATTCCACTTTATTACCCACAGAAAGTTTCCCTTGCTGTCTAGGAATCAAGTCTCAGTGCCTTaGAGAAAGTACATTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPVFHFITHRKFPLLSRNQVSVP*RKYIYC Trigger: GCAATAAATGTACTTTCTGCAAGGCACTGAGACTTG...ATTCCTAGACAGCAAGGGAAACTTTCTGTGGGTAATAAAGTGGAATACAGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| 3UTR CAA 72 bp | CAGAATGGGTTCCAAACTGATTATATCATGGCGGGGTaGCCTAGAAACAGAGTCTTTTACTTTACTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNGFQTDYIMAG*PRNRVFYFTDL Trigger: TAAATCAGTAAAGTAAAAGACTCTGTTTCTAGGCAACCCCGCCATGATATAATCAGTTTGGAACCCATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | TTCTCTTCTATTAGATTTGGTGTATCTGGTTTTATGTaGACGTCTTGGATCCACGAGGACTTGAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSIRFGVSGFM*TSWIHEDLSFV Trigger: CACAAAACTCAAGTCCTCGTGGATCCAAGACGTCAACATAAAACCAGATACACCAAATCTAATAGAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | CTTTTATATGCAAACATCCAGTTAGACCAGCACTGTTaGTGGAAGATGCTGTCTTTTTCTACTGTATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYANIQLDQHC*WKMLSFSTVWF Trigger: AAACCATACAGTAGAAAAAGACAGCATCTTCCACAAACAGTGCTGGTCTAACTGGATGTTTGCATATAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | ACTTGCTTAAAGAACTCTTGCACGTTCTTAACTTACTaGTTAGTGATCCCTTTCTTTTGGATTCAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: TCLKNSCTFLTY*LVIPFFWIQTT Trigger: AGTGGTTTGAATCCAAAAGAAAGGGATCACTAACAAGTAAGTTAAGAACGTGCAAGAGTTCTTTAAGCAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| 3UTR CAA 72 bp | AATTTGAATAAGAATTGCCCTTGTGGGCTCATGTATTaGAATTTTCAGTTTCCAGATGGTGGACAATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLNKNCPCGLMY*NFQFPDGGQFR Trigger: CCTAAATTGTCCACCATCTGGAAACTGAAAATTCAAATACATGAGCCCACAAGGGCAATTCTTATTCAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CAA 90 bp | TGGATCCACGAGGACTTGAGTTTTGTGCAGTGTCACAGACACGGATCAACTTGCGCAGCTATCTTTGCGTaGCAGAAAACACACTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WIHEDLSFVQCHRHGSTCAAIFA*QKTHSL Trigger: CAACGAGTGTGTTTTCTGCAACGCAAAGATAGCTGC...GCAAGTTGATCCGTGTCTGTGACACTGCACAAAACTCAAGTCCTCGTGGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CAA 90 bp | GGAAGTTCACCAGGGCACTCTCCAAACACCTTGGTTGCTTCTCTTGACAAAGACCTCTGGTACACTGGTTaGGGAATGTTCTGTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSPGHSPNTLVASLDKDLWYTG*GMFCTC Trigger: ACAAGTACAGAACATTCCCAAACCAGTGTACCAGAG...GTCTTTGTCAAGAGAAGCAACCAAGGTGTTTGGAGAGTGCCCTGGTGAACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CAA 90 bp | GAAGTGTCCTGTGGCAGAGGAAGCAGGATTAGAGACTCAGGAAAAGGAAGGCATATAGAGAGGAAGACATaGTATCAAGTCTCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVSCGRGSRIRDSGKGRHIERKT*YQVSVP Trigger: AGGCACTGAGACTTGATACAATGTCTTCCTCTCTAT...ATGCCTTCCTTTTCCTGAGTCTCTAATCCTGCTTCCTCTGCCACAGGACACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055725.12 |
||
| CDS-3UTR CAA 90 bp | TTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTGTAGCAGCTATCTTTGCGTaGCAGAAAACACACTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIAKSTMKRDSHRTRNIVAAIFA*QKTHSL Trigger: CAACGAGTGTGTTTTCTGCAACGCAAAGATAGCTGC...TACAATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| CDS CCA 90 bp | GAAAACACACTCGTTGCTGTAAGTGAATCCATTAGTCCCACAGACTaGGTTCCATTCTCTGGTACACTGGTTTGGGAATGTTCTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: ENTLVAVSESISPTD*VPFSGTLVWECSVL Trigger: AAGTACAGAACATTCCCAAACCAGTGTACCAGAGAATGGAACCCAGTCTGTGGGACTAATGGATTCACTTACAGCAACGAGTGTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| CDS CCA 90 bp | TTCTCTGGTACACTGGTTTGGGAATGTTCTGTACTTGTCGCAATCTaGCTGACGTCGAGCTTCTTTGGAAAATGCAAAAGTAGTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FSGTLVWECSVLVAI*LTSSFFGKCKSSSI Trigger: TATGGAACTACTTTTGCATTTTCCAAAGAAGCTCGACGTCAGCCAGATTGCGACAAGTACAGAACATTCCCAAACCAGTGTACCAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| CDS-3UTR CAA 90 bp | TTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTGTACAGTCTATTTTAAGTTaGGGTGCTGATAGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIAKSTMKRDSHRTRNIVQSILS*GADRKA Trigger: TGCCTTCCTATCAGCACCCAAACTTAAAATAGACTG...TACAATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| CDS-3UTR CAA 90 bp | TTGATTGCCAAATCCACCATGAAAAGGGATAGCCACAGGACTCGGAACATTGTAATAGAGAGGAAGACATaGTATCAAGTCTCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LIAKSTMKRDSHRTRNIVIERKT*YQVSVP Trigger: AGGCACTGAGACTTGATACAATGTCTTCCTCTCTAT...TACAATGTTCCGAGTCCTGTGGCTATCCCTTTTCATGGTGGATTTGGCAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| CDS-3UTR CAA 90 bp | CAATATCCTGTATTCCACTTTATTACCCACAGAAAGTTTCCCTTGCTGTCTAGGCAGTCTATTTTAAGTTaGGGTGCTGATAGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QYPVFHFITHRKFPLLSRQSILS*GADRKA Trigger: TGCCTTCCTATCAGCACCCAAACTTAAAATAGACTG...CCTAGACAGCAAGGGAAACTTTCTGTGGGTAATAAAGTGGAATACAGGATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 |
||
| CDS CCA 72 bp | CCCACAGACTGGGTTCCATTCTCTGGTACACTGGTTTaGGAATGTTCTGTACTTGTCGCAATCTGGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: PTDWVPFSGTLV*ECSVLVAIWLT Trigger: CGTCAGCCAGATTGCGACAAGTACAGAACATTCCCAAACCAGTGTACCAGAGAATGGAACCCAGTCTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| CDS CAA 72 bp | TCCCACAGACTGGGTTCCATTCTCTGGTACACTGGTTaGGGAATGTTCTGTACTTGTCGCAATCTGGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SHRLGSILWYTG*GMFCTCRNLAD Trigger: GTCAGCCAGATTGCGACAAGTACAGAACATTCCCAAACCAGTGTACCAGAGAATGGAACCCAGTCTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| CDS CAA 72 bp | TCCCACAGACTGGGTTCCATTCTCTGGTACACTGGTTaGGGAATGTTCTGTACTTGTCGCAATCTGACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SHRLGSILWYTG*GMFCTCRNLTS Trigger: CGACGTCAGATTGCGACAAGTACAGAACATTCCCAAACCAGTGTACCAGAGAATGGAACCCAGTCTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162365.8 |
||
| CDS CCA 72 bp | CTCGTTGCTGTAAGTGAATCCATTAGTCCCACAGACTaGGTTCCATTCTCTGGTACACTGGTTTGGGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LVAVSESISPTD*VPFSGTLVWEC Trigger: ACATTCCCAAACCAGTGTACCAGAGAATGGAACCCAGTCTGTGGGACTAATGGATTCACTTACAGCAACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055725.12 ENSMUST00000162365.8 ENSMUST00000162511.3 |
||
| CDS TCA 72 bp | TGGTTTGGGAATGTTCTGTACTTGTCGCAATCTGGCTaGCGTCGAGCTTCTTTGGAAAATGCAAAAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WFGNVLYLSQSG*RRASLENAKVV Trigger: AACTACTTTTGCATTTTCCAAAGAAGCTCGACGTCAGCCAGATTGCGACAAGTACAGAACATTCCCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055725.12 ENSMUST00000162511.3 |
||
| CDS TCA 72 bp | ACACTGGTTTGGGAATGTTCTGTACTTGTCGCAATCTaGCGTCGAGCTTCTTTGGAAAATGCAAAAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: TLVWECSVLVAI*RRASLENAKVV Trigger: AACTACTTTTGCATTTTCCAAAGAAGCTCGACGTCAGATTGCGACAAGTACAGAACATTCCCAAACCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162365.8 |
||