Pregenerated sensors for SPINDOC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024970Ensembl transcript IDs: ENSMUST00000025924.4, ENSMUST00000235678.2, ENSMUST00000237653.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTGCTGCTCTaGCCTGGCAGGGGTCTCTGGCTCCCACTCAGGACCACTTTTCGG | + |
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Preference number: 1 (lower is better) Translates to: DPEVQATSVLGSLLL*PGRGLWLPLRTTFR Trigger: CCGAAAAGTGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 90 bp | AAACAGACCCTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTGCTaGTCTGCCCTGGCAGGGGTCTCTGGCTCCCACTCAGGACCACTT | + |
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Preference number: 1 (lower is better) Translates to: KQTLRSKQPLFWAHC*SALAGVSGSHSGPL Trigger: AAGTGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTCTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 90 bp | TTAAAACAGACCCTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTaGTGCTCTGCCCTGGCAGGGGTCTCTGGCTCCCACTCAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: LKQTLRSKQPLFWAH*CSALAGVSGSHSGP Trigger: TGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTCTGTTTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 90 bp | GACATTAAGTTAAAACAGACCCTGAGGTCCAAGCAACCTCTGTTCTaGGCTCACTGCTGCTCTGCCCTGGCAGGGGTCTCTGGCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: DIKLKQTLRSKQPLF*AHCCSALAGVSGSH Trigger: GTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTCTGTTTTAACTTAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR TCA 90 bp | TCCTCTTCTCCTGGACAAGGACCTTCTACCTTCTTGGGCTCCTCCTaGGAATACAGATGGCTTAGCAGGGCCAATTCTCAGCCTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SSSPGQGPSTFLGSS*EYRWLSRANSQPGS Trigger: GGACCCAGGCTGAGAATTGGCCCTGCTAAGCCATCTGTATTCTCAGGAGGAGCCCAAGAAGGTAGAAGGTCCTTGTCCAGGAGAAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR TCA 90 bp | ATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCAGTCAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGI*TQDLRKSSRRAVSA Trigger: AGCGCTGACTGCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR CCA 90 bp | GTCCCTAGCCCCATAGTAGCTTTGCTTGGACAGAGGCCTACCAGGTaGGTCAGTAGGTCAAGTAAAGAAAATGGGTCTCTCAGGCGACTG | + |
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Preference number: 1 (lower is better) Translates to: VPSPIVALLGQRPTR*VSRSSKENGSLRRL Trigger: CAGTCGCCTGAGAGACCCATTTTCTTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAAGCAAAGCTACTATGGGGCTAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 90 bp | GCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: ASDLLTDGCEPPCGC*DLNSGPSEEQSKSS Trigger: ACTGCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR CCA 90 bp | TCATTTCGGTCTCCTCTTCTCCTGGACAAGGACCTTCTACCTTCTTaGGCTCCTCCTGAGAATACAGATGGCTTAGCAGGGCCAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: SFRSPLLLDKDLLPS*APPENTDGLAGPIL Trigger: GAGAATTGGCCCTGCTAAGCCATCTGTATTCTCAGGAGGAGCCCAAGAAGGTAGAAGGTCCTTGTCCAGGAGAAGAGGAGACCGAAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 90 bp | GCCGAGCCCTATGCAGGACACCAGAAATACCAAGTTAATGCAGTCTaGTCCCTGCCCCACAGAGTTCACAGTCTAAGACAAATCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: AEPYAGHQKYQVNAV*SLPHRVHSLRQIRF Trigger: GAACCTGATTTGTCTTAGACTGTGAACTCTGTGGGGCAGGGACCAGACTGCATTAACTTGGTATTTCTGGTGTCCTGCATAGGGCTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAAACAGATACAGACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACATTCCTGGCAGGGGTCTCTaGCTCCCACTCAGGACCACT | + |
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Preference number: 2 (lower is better) Translates to: QKQIQTQVSCGPDNGWDIPGRGL*LPLRTT Trigger: AGTGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGG...AATGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGTCTGTATCTGTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACAGATACAGACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACATTAACCTAAGCCGCCTCTaGCTACCTCCGGCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: QKQIQTQVSCGPDNGWDINLSRL*LPPAWP Trigger: TGGCCAAGCCGGAGGTAGGCAGAGGCGGCTTAGGTT...AATGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGTCTGTATCTGTTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACGACCCCAGGCAGACTTaGATTGAGGCTGAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: TQVSCGPDNGWDILDMMDDPRQT*IEAEEQ Trigger: CTGTTCCTCAGCCTCAATCCAAGTCTGCCTGGGGTC...GTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CAA 90 bp | TTACCTACCACCCAACAACCTAAGCCGCCTCTGCCTACCTCCGGCTaGGCCAAGAGCAGGCATTTTCCAGTAGCCCGATGTGACAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LPTTQQPKPPLPTSG*AKSRHFPVARCDSD Trigger: ATCACTGTCACATCGGGCTACTGGAAAATGCCTGCTCTTGGCCAAGCCGGAGGTAGGCAGAGGCGGCTTAGGTTGTTGGGTGGTAGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACCTTGAAAGGGAGGAGGAGATATaGGGCCAGAGGGTAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VSCGPDNGWDILDMMDLEREEEI*GQRVGQ Trigger: CTGACCTACCCTCTGGCCCCATATCTCCTCCTCCCT...TTCAAGGTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CAA 90 bp | GATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCAGTCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: DLLTDGCEPPCGCWD*NSGPSEEQSKSSQR Trigger: GCGCTGACTGCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTAACTCCTGCATCTACTTCATTTCGGTCTCCTCTTCTCCTGGACAAGGAACTGCTGCTCTGCCCTaGCAGGGGTCTCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TFNSCIYFISVSSSPGQGTAALP*QGSLAP Trigger: GGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGT...TCCTTGTCCAGGAGAAGAGGAGACCGAAATGAAGTAGATGCAGGAGTTAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACCTTGAATACCCTGACTCTTCCTaGTGGAGGCGAGGCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: VSCGPDNGWDILDMMDLEYPDSS*WRRGFI Trigger: AATGAAGCCTCGCCTCCATCAGGAAGAGTCAGGGTA...TTCAAGGTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CAA 90 bp | ACTCTTAGCTCCTTGGGTAGGAGTGTCCCTAGCCCCATAGTAGCTTaGCTTGGACAGAGGCCTACCAGGTGGGTCAGTAGGTCAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TLSSLGRSVPSPIVA*LGQRPTRWVSRSSK Trigger: TTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAAGCAAAGCTACTATGGGGCTAGGGACACTCCTACCCAAGGAGCTAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCAGCAGTGTGGGGTGGCCTCACCTCCTAGGATTTGAGAGTAAGCAATCTCATCATGACCACCTCTaGATAAGGCACTGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TVSSVGWPHLLGFESKQSHHDHL*IRHCAR Trigger: CCTGGCACAGTGCCTTATGCAGAGGTGGTCATGATG...AGATTGCTTACTCTCAAATCCTAGGAGGTGAGGCCACCCCACACTGCTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCTGGTCCCTGCCCCACAGAGTTCACAGTCTAAGACAAATCAGGTTCATATTCTTGGGCTCCTCCTaGGAATACAGATGGCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: AVWSLPHRVHSLRQIRFIFLGSS*EYRWLS Trigger: GCTAAGCCATCTGTATTCTCAGGAGGAGCCCAAGAA...TATGAACCTGATTTGTCTTAGACTGTGAACTCTGTGGGGCAGGGACCAGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGATGGAGGCGAGGCTTCATTTTACCTTTCCCCAAGTCTCCATAATATACTGTAGGAGCCAGAAGTaGGGGAGGAAAGGTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FLMEARLHFTFPQVSIIYCRSQK*GRKGVP Trigger: GGGGACACCTTTCCTCCCCCACTTCTGGCTCCTACA...GTATATTATGGAGACTTGGGGAAAGGTAAAATGAAGCCTCGCCTCCATCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTACATCTAAACTGCATAAGGCACTGTaGCAGGGGAGAATGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QKPPAISTQCFQRQSTSKLHKAL*QGRMVG Trigger: CCCCACCATTCTCCCCTGGCACAGTGCCTTATGCAG...TTTAGATGTAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACCTTGAACAACAGGACAATAGATaGAACAGGACAACAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: VSCGPDNGWDILDMMDLEQQDNR*NRTTGK Trigger: TTTACCTGTTGTCCTGTTGCATCTATTGTCCTGTTG...TTCAAGGTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | TCATACAACCACAAAGGGGCAAGCGTTTGGATAATCATTTTACAACACAATCTTTTCTGGGCTCACTGCTaGTCTGCCCTGGCAGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SYNHKGASVWIIILQHNLFWAHC*SALAGV Trigger: GACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAA...AAGATTGTGTTGTAAAATGATTATCCAAACGCTTGCCCCTTTGTGGTTGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | TCATACAACCACAAAGGGGCAAGCGTTTGGATAATCATTTTACAACACAATCTTCTGTTCTGGGCTCACTaGTGCTCTGCCCTGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SYNHKGASVWIIILQHNLLFWAH*CSALAG Trigger: CCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAG...AAGATTGTGTTGTAAAATGATTATCCAAACGCTTGCCCCTTTGTGGTTGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTAACTCCTGCATCTACTTCATTTCGGTCTCCTCTTCTCCTGGACAAGGACACTTTTCGGTTTCCTaGCCCTCAATCTGCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TFNSCIYFISVSSSPGQGHFSVS*PSICSK Trigger: CTTAGAGCAGATTGAGGGGCAGGAAACCGAAAAGTG...TCCTTGTCCAGGAGAAGAGGAGACCGAAATGAAGTAGATGCAGGAGTTAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTAAGGATGCCTAAAATCTaGAGACCCCAGGCAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLRMPKI*RPQADL Trigger: CAAGTCTGCCTGGGGTCTGCAGATTTTAGGCATCCT...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGATGGAGGCGAGGCTTCATTTTACCTTTCCCCAAGTCTCCATAATATACAGCGATAGCTCAGGATaGCTAAAATCTGCAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: FLMEARLHFTFPQVSIIYSDSSG*LKSADP Trigger: GGGGTCTGCAGATTTTAGGCATCCTGAGCTATCGCT...GTATATTATGGAGACTTGGGGAAAGGTAAAATGAAGCCTCGCCTCCATCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | TCATACAACCACAAAGGGGCAAGCGTTTGGATAATCATTTTACAACACAATCTTTGTGCCAGGGGAGAATaGTGGGGAGCTGAGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SYNHKGASVWIIILQHNLCARGE*WGAERE Trigger: CTCCCTCTCAGCTCCCCACCATTCTCCCCTGGCACA...AAGATTGTGTTGTAAAATGATTATCCAAACGCTTGCCCCTTTGTGGTTGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR GCA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTACACAGATTAGGTCTATaGAGCGATAGCTCAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLHRLGL*SDSSGC Trigger: GCATCCTGAGCTATCGCTGCATAGACCTAATCTGTG...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CCA 90 bp | TCATACAACCACAAAGGGGCAAGCGTTTGGATAATCATTTTACAACACAATCTTGGTCTCCTCTTCTCCTaGACAAGGACCTTCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: SYNHKGASVWIIILQHNLGLLFS*TRTFYL Trigger: AAGGTAGAAGGTCCTTGTCCAGGAGAAGAGGAGACC...AAGATTGTGTTGTAAAATGATTATCCAAACGCTTGCCCCTTTGTGGTTGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 72 bp | GTCCAAGCAACCTCTGTTCTGGGCTCACTGCTGCTCTaGCCTGGCAGGGGTCTCTGGCTCCCACTCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: VQATSVLGSLLL*PGRGLWLPLRT Trigger: GGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 72 bp | ACCCTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTaGTGCTCTGCCCTGGCAGGGGTCTCTGGCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TLRSKQPLFWAH*CSALAGVSGSH Trigger: GTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 72 bp | CTGGGCTCACTGCTGCTCTGCCCTGGCAGGGGTCTCTaGCTCCCACTCAGGACCACTTTTCGGTTTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: LGSLLLCPGRGL*LPLRTTFRFPA Trigger: GGCAGGAAACCGAAAAGTGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 72 bp | CTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTGCTaGTCTGCCCTGGCAGGGGTCTCTGGCTCCCACTCA | + |
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Preference number: 3 (lower is better) Translates to: LRSKQPLFWAHC*SALAGVSGSHS Trigger: TGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 72 bp | TTAAAACAGACCCTGAGGTCCAAGCAACCTCTGTTCTaGGCTCACTGCTGCTCTGCCCTGGCAGGGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LKQTLRSKQPLF*AHCCSALAGVS Trigger: AGAGACCCCTGCCAGGGCAGAGCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTCTGTTTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 72 bp | CTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LLTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR TCA 72 bp | GGCTTAGCAGGGCCAATTCTCAGCCTGGGTCCAGTATaGGATCTCTGGTCTGGGAACAGTAGCTTAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GLAGPILSLGPV*DLWSGNSSLSK Trigger: CTTGCTTAAGCTACTGTTCCCAGACCAGAGATCTCATACTGGACCCAGGCTGAGAATTGGCCCTGCTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR TCA 72 bp | CCTGGACAAGGACCTTCTACCTTCTTGGGCTCCTCCTaGGAATACAGATGGCTTAGCAGGGCCAATTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PGQGPSTFLGSS*EYRWLSRANSQ Trigger: CTGAGAATTGGCCCTGCTAAGCCATCTGTATTCTCAGGAGGAGCCCAAGAAGGTAGAAGGTCCTTGTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR GCA 72 bp | GATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLLTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR TCA 72 bp | ACAGGGGTGAAGTGTATAGTGGAGTGCACAGCCCTTTaGGAATGCAGGGATGTACCACCTTCACATCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TGVKCIVECTAL*ECRDVPPSHQR Trigger: CCTCTGATGTGAAGGTGGTACATCCCTGCATTCTCAAAGGGCTGTGCACTCCACTATACACTTCACCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR-3UTR CAA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTACCAGGCAGACTTGGATaGAGGCTGAGGAACAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLPGRLG*RLRNRG Trigger: ACCCCTGTTCCTCAGCCTCAATCCAAGTCTGCCTGG...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR TCA 72 bp | AGCTTAAGCAAGCACACAGCATACCCTGACTCTTCCTaGTGGAGGCGAGGCTTCATTTTACCTTTCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLSKHTAYPDSS*WRRGFILPFPK Trigger: CTTGGGGAAAGGTAAAATGAAGCCTCGCCTCCATCAGGAAGAGTCAGGGTATGCTGTGTGCTTGCTTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CCA 72 bp | CCCATAGTAGCTTTGCTTGGACAGAGGCCTACCAGGTaGGTCAGTAGGTCAAGTAAAGAAAATGGGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PIVALLGQRPTR*VSRSSKENGSL Trigger: GAGAGACCCATTTTCTTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAAGCAAAGCTACTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR TCA 72 bp | AGACAATGGCTGGGACATTCTGGACATGATGGACCTTaGACCTTTAACTCCTGCATCTACTTCATTTCGGTC | + |
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Preference number: 3 (lower is better) Translates to: RQWLGHSGHDGP*TFNSCIYFISV Trigger: GACCGAAATGAAGTAGATGCAGGAGTTAAAGGTTCAAGGTCCATCATGTCCAGAATGTCCCAGCCATTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | GGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTAATGGAGGCTGTGCCAGGGGAGAATaGTGGGGAGCTGGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GVVTGALGRDKAVRGNGGCARGE*WGAGSG Trigger: CCCTGACCCAGCTCCCCACCATTCTCCCCTGGCACA...GCCTCCATTACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235678.2 |
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| CDS-3UTR CCA 90 bp | GGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTAATGGAGGCCTGCGAATGTCTCTGTaGGTGACTCAGGAGACGGGG | + |
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Preference number: 4 (lower is better) Translates to: GVVTGALGRDKAVRGNGGLRMSL*VTQETG Trigger: CCCCGTCTCCTGAGTCACCCACAGAGACATTCGCAG...GCCTCCATTACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCCAGCCCCACACACCATaGACAGCGCCCGTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDLLTDGCEPPCGCQPHTP*TAPVHC Trigger: GCAGTGGACGGGCGCTGTGCATGGTGTGTGGGGCTG...GCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR TCA 90 bp | GGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTAATGGAGGCTACAGTCAGTGGTCCTaGGCTGAGTGTGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVVTGALGRDKAVRGNGGYSQWS*AECGRR Trigger: TCTTCTCCCACACTCAGCTCAGGACCACTGACTGTA...GCCTCCATTACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | ACAGGTAAAGGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTTTGGTGCCCTGGGGGTaGTTGGACCAGTCCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGKGVVTGALGRDKAVRGLVPWG*LDQSCK Trigger: CTTACAGGACTGGTCCAAGCACCCCCAGGGCACCAA...ACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCCTTTACCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCTGGCAGGGGTCTCTGGCTCCCACTCAGGACCACTTTTCGGTTTCCTCGAACACGGATAACCTaGAGATCCAGTGTCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LCPGRGLWLPLRTTFRFPRTRIT*RSSVPR Trigger: CCGTGGGACACTGGATCTCCAGGTTATCCGTGTTCG...AGGAAACCGAAAAGTGGTCCTGAGTGGGAGCCAGAGACCCCTGCCAGGGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | GAGGAAATGTCAGTGCAGGCTGGCCAAGTTCAGGGCCCACTAACTCTTAGCTCCGAGATGGGGTCTGGCTaGCCATCCTGGCCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEMSVQAGQVQGPLTLSSEMGSG*PSWPDS Trigger: AGAGTCAGGCCAGGATGGCCAGCCAGACCCCATCTC...GGAGCTAAGAGTTAGTGGGCCCTGAACTTGGCCAGCCTGCACTGACATTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | GAGGAAATGTCAGTGCAGGCTGGCCAAGTTCAGGGCCCACTAACTCTTAGCTCCGAGGCTGACGGCTGGTaGTTCCTCCATCCGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: EEMSVQAGQVQGPLTLSSEADGW*FLHPNT Trigger: CGTGTTCGGATGGAGGAACCACCAGCCGTCAGCCTC...GGAGCTAAGAGTTAGTGGGCCCTGAACTTGGCCAGCCTGCACTGACATTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCCCCAGGCTCTCTGTCTaGAGAGGGGTTTTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDLLTDGCEPPCGCPRLSV*RGVLWL Trigger: CAGCCACAAAACCCCTCTTCAGACAGAGAGCCTGGG...GCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | GAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGCCCACCAGGAACTCCTaGTCCCATGACACTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPPCGCWDLNSGPSEEQSPTRNS*SHDTCC Trigger: GCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGG...CGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | TTGGACAGAGGCCTACCAGGTGGGTCAGTAGGTCAAGTAAAGAAAATGGGTCTCCAGCCCCACACACCATaGACAGCGCCCGTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRGLPGGSVGQVKKMGLQPHTP*TAPVHC Trigger: GCAGTGGACGGGCGCTGTGCATGGTGTGTGGGGCTG...GAGACCCATTTTCTTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | AAGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGGGCAGGCCCTCTGCTaGTCTGCTGTCCTTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRASDLLTDGCEPPCGCWGQALC*SAVLRR Trigger: TCTTCTAAGGACAGCAGAGCAGCAGAGGGCCTGCCC...CCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCCTGGGGCAGGCCCTCTaGTGCTCTGCTGTCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQSKSLGQAL*CSAVLR Trigger: TCTAAGGACAGCAGAGCAGCAGAGGGCCTGCCCCAG...GCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CCA 90 bp | CTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTGGCCTGACTCTAGGCTaGGCAGGGATGGCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTDGCEPPCGCWDLNSGPGLTLG*AGMAGQ Trigger: CTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCC...AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| 3UTR CAA 72 bp | TCCTTGGGTAGGAGTGTCCCTAGCCCCATAGTAGCTTaGCTTGGACAGAGGCCTACCAGGTGGGTCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRSVPSPIVA*LGQRPTRWVSR Trigger: CCTACTGACCCACCTGGTAGGCCTCTGTCCAAGCAAAGCTACTATGGGGCTAGGGACACTCCTACCCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR TCA 90 bp | AGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATGAACTCCTGCTCCCATaGCACTTGCTGCTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RASDLLTDGCEPPCGCWDELLLP*HLLLEL Trigger: GAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTC...ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | GGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTAATGGAGGCGGCTTTTTATTCCCTTaGTCTATGACAGGGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: GVVTGALGRDKAVRGNGGGFLFP*SMTGVT Trigger: CGTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCC...GCCTCCATTACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000235678.2 |
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| CDS-3UTR CCA 90 bp | CTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTGATCCGGGTTGGAGATaGGGTCTGGCTGGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTDGCEPPCGCWDLNSGPDPGWR*GLAGHP Trigger: AGGATGGCCAGCCAGACCCCATCTCCAACCCGGATC...AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCCTGCGAATGTCTCTGTaGGTGACTCAGGAGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQSKSLRMSL*VTQETG Trigger: CCCCGTCTCCTGAGTCACCCACAGAGACATTCGCAG...GCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CCA 90 bp | CAGGACAATAGATGCAACAGGACAACAGGTAAAGGGGTTGTAACGGGAGCCCTCTGCCCTGGGGGTGCTTaGACCAGTCCTGTAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDNRCNRTTGKGVVTGALCPGGA*TSPVRG Trigger: GCCTCTTACAGGACTGGTCCAAGCACCCCCAGGGCA...GAGGGCTCCCGTTACAACCCCTTTACCTGTTGTCCTGTTGCATCTATTGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | TACAGAAACAGATACAGACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACAACAGCCTTCAACACCTaGTTCCAGCAGGTTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YRNRYRPRCPVAQTMAGTTAFNT*FQQVRP Trigger: CGGCCTAACCTGCTGGAAGCAGGTGTTGAAGGCTGT...TGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGTCTGTATCTGTTTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTCCCATGACACTTGCTaGTTGAGCTCCTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDLLTDGCEPPCGCSHDTC*LSSSQP Trigger: AGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGA...GCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | AGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTGCTCCCATGACACTTaGTGCTTGAGCTCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RASDLLTDGCEPPCGCWDCSHDT*CLSSSQ Trigger: CTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCA...ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | CAGGACAATAGATGCAACAGGACAACAGGTAAAGGGGTTGTAACGGGAGCCCTCCTGCATAAGGCACTGTaGCAGGGGAGAATGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QDNRCNRTTGKGVVTGALLHKAL*QGRMVG Trigger: CCCCACCATTCTCCCCTGGCACAGTGCCTTATGCAG...GAGGGCTCCCGTTACAACCCCTTTACCTGTTGTCCTGTTGCATCTATTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235678.2 |
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| CDS-3UTR CCA 90 bp | GCAGTCTGGTCCCTGCCCCACAGAGTTCACAGTCTAAGACAAATCAGGTTCATAGATCCGGGTTGGAGATaGGGTCTGGCTGGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVWSLPHRVHSLRQIRFIDPGWR*GLAGHP Trigger: AGGATGGCCAGCCAGACCCCATCTCCAACCCGGATC...TATGAACCTGATTTGTCTTAGACTGTGAACTCTGTGGGGCAGGGACCAGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSKS Trigger: GCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR TCA 90 bp | GAGGAAATGTCAGTGCAGGCTGGCCAAGTTCAGGGCCCACTAACTCTTAGCTCCATGACACTTGCTGCTTaGGCTCCTCACAGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEMSVQAGQVQGPLTLSSMTLAA*APHSLQ Trigger: TTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCAT...GGAGCTAAGAGTTAGTGGGCCCTGAACTTGGCCAGCCTGCACTGACATTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR TCA 90 bp | GCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTACAGTCAGTGGTCCTaGGCTGAGTGTGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLLTDGCEPPCGCWDLYSQWS*AECGRR Trigger: TCTTCTCCCACACTCAGCTCAGGACCACTGACTGTA...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR GCA 90 bp | TACAGAAACAGATACAGACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACATCCCATGACACTTGCTaGTTGAGCTCCTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRNRYRPRCPVAQTMAGTSHDTC*LSSSQP Trigger: AGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGA...TGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGTCTGTATCTGTTTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | ATACCAGGAACAGTCAGCAGTGTGGGGTGGCCTCACCTCCTAGGATTTGAGAGTTGCTCCCATGACACTTaGTGCTTGAGCTCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPGTVSSVGWPHLLGFESCSHDT*CLSSSQ Trigger: CTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCA...ACTCTCAAATCCTAGGAGGTGAGGCCACCCCACACTGCTGACTGTTCCTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | CTGGACAAGGACCTTCTACCTTCTTGGGCTCCTCCTGAGAATACAGATGGCTTAGGGCAGGCCCTCTGCTaGTCTGCTGTCCTTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDKDLLPSWAPPENTDGLGQALC*SAVLRR Trigger: TCTTCTAAGGACAGCAGAGCAGCAGAGGGCCTGCCC...TAAGCCATCTGTATTCTCAGGAGGAGCCCAAGAAGGTAGAAGGTCCTTGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | AGTCTGGTCCCTGCCCCACAGAGTTCACAGTCTAAGACAAATCAGGTTCATACACTGGGGCAGGCCCTCTaGTGCTCTGCTGTCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVPAPQSSQSKTNQVHTLGQAL*CSAVLR Trigger: TCTAAGGACAGCAGAGCAGCAGAGGGCCTGCCCCAG...TGTATGAACCTGATTTGTCTTAGACTGTGAACTCTGTGGGGCAGGGACCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | AGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATCCTCTTAGGAAGGGATaGGTTGTCCTCGGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RASDLLTDGCEPPCGCWDPLRKG*VVLGIQ Trigger: TTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGG...ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGATGGAGGCGAGGCTTCATTTTACCTTTCCCCAAGTCTCCATAATATACACCCCCTTGGTGCCCTaGGGGTGCTTGGACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLMEARLHFTFPQVSIIYTPLVP*GCLDQS Trigger: GGACTGGTCCAAGCACCCCCAGGGCACCAAGGGGGT...GTATATTATGGAGACTTGGGGAAAGGTAAAATGAAGCCTCGCCTCCATCAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCATGACACTTGCTGCTTaGGCTCCTCACAGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQSKSMTLAA*APHSLQ Trigger: TTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCAT...GCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR TCA 90 bp | GCAGTCTGGTCCCTGCCCCACAGAGTTCACAGTCTAAGACAAATCAGGTTCATAAGTGGCACTGGATTCTaGCAGAACTGTGGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVWSLPHRVHSLRQIRFISGTGF*QNCGPV Trigger: GACTGGCCCACAGTTCTGTCAGAATCCAGTGCCACT...TATGAACCTGATTTGTCTTAGACTGTGAACTCTGTGGGGCAGGGACCAGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCAGTGATGGCTGGTCAGCTTaGATGTCTTGCAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGPSEEQSKSSDGWSA*MSCRRA Trigger: TGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATC...ACTGCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR TCA 90 bp | GTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACCTTGAAGACTCTTTCCATCTCTaGCCACGGGGCTTTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSCGPDNGWDILDMMDLEDSFHL*PRGFLF Trigger: GAATAAAAAGCCCCGTGGTCAGAGATGGAAAGAGTC...TTCAAGGTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | CAGGACAATAGATGCAACAGGACAACAGGTAAAGGGGTTGTAACGGGAGCCCTCATTCTGACAGAACTGTaGGCCAGTCTGGCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QDNRCNRTTGKGVVTGALILTEL*ASLACH Trigger: GTGACAAGCCAGACTGGCCCACAGTTCTGTCAGAAT...GAGGGCTCCCGTTACAACCCCTTTACCTGTTGTCCTGTTGCATCTATTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | CAGGACAATAGATGCAACAGGACAACAGGTAAAGGGGTTGTAACGGGAGCCCTCAGAATGGTGGGGAGCTaGGTCAGGGTCCAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDNRCNRTTGKGVVTGALRMVGS*VRVQDF Trigger: AAAATCTTGGACCCTGACCCAGCTCCCCACCATTCT...GAGGGCTCCCGTTACAACCCCTTTACCTGTTGTCCTGTTGCATCTATTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235678.2 |
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| CDS-3UTR GCA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTACCCACCAGGAACTCCTaGTCCCATGACACTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLPTRNS*SHDTCC Trigger: GCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGG...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | ACAGTCAGCAGTGTGGGGTGGCCTCACCTCCTAGGATTTGAGAGTAAGCAATCTAGGCTTCTAAGATGTTaGTCTTCTCAGAGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSSVGWPHLLGFESKQSRLLRC*SSQRGS Trigger: TGAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCT...AGATTGCTTACTCTCAAATCCTAGGAGGTGAGGCCACCCCACACTGCTGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR GCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGAAGAGCAGTAGGCTTCTAAGATGTTaGTCTTCTCAGAGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGPSEEQSKSSRLLRC*SSQRGS Trigger: TGAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCT...ACTGCTCTTCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGGCTTTTTATTCCCTTaGTCTATGACAGGGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: ASDLLTDGCEPPCGCWDLGFLFP*SMTGVT Trigger: CGTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCC...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
||
| 3UTR CAA 72 bp | AACAGGGGTGAAGTGTATAGTGGAGTGCACAGCCCTTaGAGAATGCAGGGATGTACCACCTTCACATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRGEVYSGVHSP*RMQGCTTFTSE Trigger: CTCTGATGTGAAGGTGGTACATCCCTGCATTCTCAAAGGGCTGTGCACTCCACTATACACTTCACCCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
||
| CDS-3UTR GCA 90 bp | AAGTTAAAACAGACCCTGAGGTCCAAGCAACCTCTGTTCTGGGCTCACTGCTGCGGCTTTTTATTCCCTTaGTCTATGACAGGGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: KLKQTLRSKQPLFWAHCCGFLFP*SMTGVT Trigger: CGTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCC...GCAGCAGTGAGCCCAGAACAGAGGTTGCTTGGACCTCAGGGTCTGTTTTAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAACTCCTGCATCTACTTCATTTCGGTCTCCTCTTCTCCTGGACAAGGAGATGGCTGGTCAGCTTaGATGTCTTGCAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNSCIYFISVSSSPGQGDGWSA*MSCRRA Trigger: TGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATC...TCCTTGTCCAGGAGAAGAGGAGACCGAAATGAAGTAGATGCAGGAGTTAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTATCCACTCCCTGCCTTTaGTTGTCCCTTAACAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLSTPCL*LSLNSG Trigger: GCCACTGTTAAGGGACAACCAAAGGCAGGGAGTGGA...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | TCAACACAGTGCTTTCAGAGACAGTCTACATCTAAATTATTTTTAGGGAGCATAGGCCTGACTCTAGGCTaGGCAGGGATGGCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STQCFQRQSTSKLFLGSIGLTLG*AGMAGQ Trigger: CTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCC...TATGCTCCCTAAAAATAATTTAGATGTAGACTGTCTCTGAAAGCACTGTGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CCA 90 bp | GACATTCTGGACATGATGGACCTTGAACCTTTAACTCCTGCATCTACTTCATTTCCTCTTAGGAAGGGATaGGTTGTCCTCGGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DILDMMDLEPLTPASTSFPLRKG*VVLGIQ Trigger: TTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGG...AAATGAAGTAGATGCAGGAGTTAAAGGTTCAAGGTCCATCATGTCCAGAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR TCA 90 bp | TCAACACAGTGCTTTCAGAGACAGTCTACATCTAAATTATTTTTAGGGAGCATAGAACTCCTGCTCCCATaGCACTTGCTGCTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STQCFQRQSTSKLFLGSIELLLP*HLLLEL Trigger: GAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTC...TATGCTCCCTAAAAATAATTTAGATGTAGACTGTCTCTGAAAGCACTGTGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 90 bp | CCTGCTTCCAGCAGGTTAGGCCGAGGTGGCGGCGTCTTTTCCTGTTaGGTTACTCGGAGCATCGGCTCGGGCCGCGGGATCACGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PASSRLGRGGGVFSC*VTRSIGSGRGITAT Trigger: GGTGGCCGTGATCCCGCGGCCCGAGCCGATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCTGGAAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS TCA 90 bp | CGGCCACCACCACGGCCTCGTCGTCATCATCCCCTTCCTCACACTTaGGCGTCACCTCGAAGCAATCCAGAGCCGCGGCGCCCTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPPPRPRRHHPLPHT*ASPRSNPEPRRPWL Trigger: AAGCCAAGGGCGCCGCGGCTCTGGATTGCTTCGAGGTGACGCTCAAGTGTGAGGAAGGGGATGATGACGACGAGGCCGTGGTGGTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 90 bp | ATCCTGACAGGATCCGGGTTGGAGATGGGGTCTGGCTGGCCATCCTaGCCTGACTCTAGGCTGGGCAGGGATGGCTGGTCAGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILTGSGLEMGSGWPS*PDSRLGRDGWSAWM Trigger: CATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGGCCAGCCAGACCCCATCTCCAACCCGGATCCTGTCAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | AAGAGGCTGACGGCTGGTGGTTCCTCCATCCGAACACGGATAACCTaGAGATCCAGTGTCCCACGGAGCCCCGGAGGGGAGGCTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRLTAGGSSIRTRIT*RSSVPRSPGGEAEE Trigger: CTCTTCAGCCTCCCCTCCGGGGCTCCGTGGGACACTGGATCTCCAGGTTATCCGTGTTCGGATGGAGGAACCACCAGCCGTCAGCCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 90 bp | AGCGCCCGTCCACTGCCTCCTGGGCTGTTCCCCACCAGGAACTCCTaGTCCCATGACACTTGCTGCTTGAGCTCCTCACAGCCTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SARPLPPGLFPTRNS*SHDTCCLSSSQPST Trigger: TGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAGCCCAGGAGGCAGTGGACGGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | CTCCTCACAGCCTTCAACACCTGCTTCCAGCAGGTTAGGCCGAGGTaGCGGCGTCTTTTCCTGTTGGGTTACTCGGAGCATCGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTAFNTCFQQVRPR*RRLFLLGYSEHRLG Trigger: CCCGAGCCGATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCTGGAAGCAGGTGTTGAAGGCTGTGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 90 bp | TCTGGCTGGCCATCCTGGCCTGACTCTAGGCTGGGCAGGGATGGCTaGTCAGCTTGGATGTCTTGCAGAAGGGCAACCCCTTCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGWPSWPDSRLGRDG*SAWMSCRRATPSLQ Trigger: CTGGAGTGAAGGGGTTGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGGCCAGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | GGTTGGAGATGGGGTCTGGCTGGCCATCCTGGCCTGACTCTAGGCTaGGCAGGGATGGCTGGTCAGCTTGGATGTCTTGCAGAAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GWRWGLAGHPGLTLG*AGMAGQLGCLAEGQ Trigger: TTGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGGCCAGCCAGACCCCATCTCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS TCA 90 bp | GGTTGTCCTCGGAATCCAAGAGGACCACTATCTCTGCTGGCATCCTaGCAGGATCCGGGTTGGAGATGGGGTCTGGCTGGCCATCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPRNPRGPLSLLAS*QDPGWRWGLAGHPG Trigger: GCCAGGATGGCCAGCCAGACCCCATCTCCAACCCGGATCCTGTCAGGATGCCAGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS GCA 90 bp | CCTCCTGGGCTGTTCCCCACCAGGAACTCCTGCTCCCATGACACTTaGTGCTTGAGCTCCTCACAGCCTTCAACACCTGCTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGLFPTRNSCSHDT*CLSSSQPSTPASSR Trigger: CCTGCTGGAAGCAGGTGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAGCCCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | CTCAAGGGGGCGGAGTCCTCTGGGCCGGAGCCTCTTAGGAAGGGATaGGTTGTCCTCGGAATCCAAGAGGACCACTATCTCTGCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKGAESSGPEPLRKG*VVLGIQEDHYLCWH Trigger: ATGCCAGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGGCTCCGGCCCAGAGGACTCCGCCCCCTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS TCA 90 bp | TCCACTGCCTCCTGGGCTGTTCCCCACCAGGAACTCCTGCTCCCATaGCACTTGCTGCTTGAGCTCCTCACAGCCTTCAACACCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STASWAVPHQELLLP*HLLLELLTAFNTCF Trigger: GAAGCAGGTGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAGCCCAGGAGGCAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS TCA 90 bp | GGGAGAAGAGCTGGAGGACGAAGCCAGGAGGGAAGCTGCCATCAGTaGAGTGTCGGACTTCAGCTGGTGCTGCGAATGTCTCTGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRAGGRSQEGSCHQ*SVGLQLVLRMSLWV Trigger: CACCCACAGAGACATTCGCAGCACCAGCTGAAGTCCGACACTTCACTGATGGCAGCTTCCCTCCTGGCTTCGTCCTCCAGCTCTTCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | CCATCCTGGCCTGACTCTAGGCTGGGCAGGGATGGCTGGTCAGCTTaGATGTCTTGCAGAAGGGCAACCCCTTCACTCCAGGCTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSWPDSRLGRDGWSA*MSCRRATPSLQASK Trigger: CTTAGAAGCCTGGAGTGAAGGGGTTGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 90 bp | AAGGGATGGGTTGTCCTCGGAATCCAAGAGGACCACTATCTCTGCTaGCATCCTGACAGGATCCGGGTTGGAGATGGGGTCTGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGWVVLGIQEDHYLC*HPDRIRVGDGVWLA Trigger: GGCCAGCCAGACCCCATCTCCAACCCGGATCCTGTCAGGATGCCAGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | GAGGAAATGTCAGTGCAGGCTGGCCAAGTTCAGGGCCCACTAACTCTTAGCTCCGTGCCCTGGGGGTGCTaGGACCAGTCCTGTAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEMSVQAGQVQGPLTLSSVPWGC*DQSCKR Trigger: CCTCTTACAGGACTGGTCCAAGCACCCCCAGGGCAC...GGAGCTAAGAGTTAGTGGGCCCTGAACTTGGCCAGCCTGCACTGACATTTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 90 bp | CCTGGGCTGTTCCCCACCAGGAACTCCTGCTCCCATGACACTTGCTaGTTGAGCTCCTCACAGCCTTCAACACCTGCTTCCAGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGLFPTRNSCSHDTC*LSSSQPSTPASSRL Trigger: TAACCTGCTGGAAGCAGGTGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS GCA 90 bp | AGGAAGGGATGGGTTGTCCTCGGAATCCAAGAGGACCACTATCTCTaGTGGCATCCTGACAGGATCCGGGTTGGAGATGGGGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGWVVLGIQEDHYL*WHPDRIRVGDGVWL Trigger: CAGCCAGACCCCATCTCCAACCCGGATCCTGTCAGGATGCCAGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCTGACAGGATCCGGGTaGGAGATGGGGTCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCEPPCGCWDLNSGPSEELTGSG*EMGSGW Trigger: CCAGCCAGACCCCATCTCCAACCCGGATCCTGTCAG...CTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS TCA 90 bp | GCTCTGCTGTCCTTAGAAGAGTCCTTACAGTCAGTGGTCCTGAGCTaGGTGTGGGAGAAGAGCTGGAGGACGAAGCCAGGAGGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLSLEESLQSVVLS*VWEKSWRTKPGGKL Trigger: CAGCTTCCCTCCTGGCTTCGTCCTCCAGCTCTTCTCCCACACTCAGCTCAGGACCACTGACTGTAAGGACTCTTCTAAGGACAGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS TCA 90 bp | TCCACTCCCTGCCTTTGGTTGTCCCTTAACAGTGGCACTGGATTCTaGCAGAACTGTGGGCCAGTCTGGCTTGTCACCTGTTCCCACCCC | + |
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Preference number: 5 (lower is better) Translates to: STPCLWLSLNSGTGF*QNCGPVWLVTCSHP Trigger: GGGGTGGGAACAGGTGACAAGCCAGACTGGCCCACAGTTCTGTCAGAATCCAGTGCCACTGTTAAGGGACAACCAAAGGCAGGGAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 90 bp | CCTGACTCTAGGCTGGGCAGGGATGGCTGGTCAGCTTGGATGTCTTaGAGAAGGGCAACCCCTTCACTCCAGGCTTCTAAGATGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDSRLGRDGWSAWMS*RRATPSLQASKMLL Trigger: GAGCAACATCTTAGAAGCCTGGAGTGAAGGGGTTGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCGGATGGCTGGTCAGCTaGGATGTCTTGCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QKRASDLLTDGCEPPCGCGWLVS*DVLQKG Trigger: GCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCC...GCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | GGGGTTGTAACGGGAGCCCTCGGCAGGGACAAGGCGGTAAGAGGTAATGGAGGCGGGCTTTTTATTCCCTaGCTCTATGACAGGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVVTGALGRDKAVRGNGGGLFIP*LYDRGN Trigger: GTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCCC...GCCTCCATTACCTCTTACCGCCTTGTCCCTGCCGAGGGCTCCCGTTACAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000235678.2 |
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| CDS GCA 90 bp | TGTCTTGCAGAAGGGCAACCCCTTCACTCCAGGCTTCTAAGATGTTaGTCTTCTCAGAGGGGCTCAGGTCCAGGGTGTGAGGATGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLAEGQPLHSRLLRC*SSQRGSGPGCEDAA Trigger: AGCAGCATCCTCACACCCTGGACCTGAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCTGGAGTGAAGGGGTTGCCCTTCTGCAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGCGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCATGACACTTGCTGCTaGAGCTCCTCACAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGRQISLRMVVSHHVVAGHDTCC*SSSQPS Trigger: TGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATG...CCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACGCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | CAGGACAATAGATGCAACAGGACAACAGGTAAAGGGGTTGTAACGGGAGCCCTCGGATGGCTGGTCAGCTaGGATGTCTTGCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDNRCNRTTGKGVVTGALGWLVS*DVLQKG Trigger: GCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCC...GAGGGCTCCCGTTACAACCCCTTTACCTGTTGTCCTGTTGCATCTATTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGGCTTCTAAGATGTaGCTCTTCTCAGAGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEQASKM*LFSEGL Trigger: GAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCTG...CTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTAACTCCTGCATCTACTTCATTTCGGTCTCCTCTTCTCCTGGACAAGGACTGACAGGATCCGGGTaGGAGATGGGGTCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFNSCIYFISVSSSPGQGLTGSG*EMGSGW Trigger: CCAGCCAGACCCCATCTCCAACCCGGATCCTGTCAG...TCCTTGTCCAGGAGAAGAGGAGACCGAAATGAAGTAGATGCAGGAGTTAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | ACCCAGGTGTCCTGTGGCCCAGACAATGGCTGGGACATTCTGGACATGATGGACGGGCTTTTTATTCCCTaGCTCTATGACAGGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQVSCGPDNGWDILDMMDGLFIP*LYDRGN Trigger: GTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCCC...GTCCATCATGTCCAGAATGTCCCAGCCATTGTCTGGGCCACAGGACACCTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | TGTAGGGACAGAAACCACCTGCAATTTCAACACAGTGCTTTCAGAGACAGTCTAGTGGGCCAGTCTGGCTaGTCACCTGTTCCCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRDRNHLQFQHSAFRDSLVGQSG*SPVPTP Trigger: GGGGGTGGGAACAGGTGACAAGCCAGACTGGCCCAC...TAGACTGTCTCTGAAAGCACTGTGTTGAAATTGCAGGTGGTTTCTGTCCCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | TTGGACAGAGGCCTACCAGGTGGGTCAGTAGGTCAAGTAAAGAAAATGGGTCTCTCCCCTTCCTCACACTaGAGCGTCACCTCGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LDRGLPGGSVGQVKKMGLSPSSH*SVTSKQ Trigger: TTGCTTCGAGGTGACGCTCAAGTGTGAGGAAGGGGA...GAGACCCATTTTCTTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | TTGGACAGAGGCCTACCAGGTGGGTCAGTAGGTCAAGTAAAGAAAATGGGTCTCCATGACACTTGCTGCTaGAGCTCCTCACAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDRGLPGGSVGQVKKMGLHDTCC*SSSQPS Trigger: TGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATG...GAGACCCATTTTCTTTACTTGACCTACTGACCCACCTGGTAGGCCTCTGTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS-3UTR CAA 90 bp | CTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTGGGCTTTTTATTCCCTaGCTCTATGACAGGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTDGCEPPCGCWDLNSGPGLFIP*LYDRGN Trigger: GTTACCCCTGTCATAGAGCAAGGGAATAAAAAGCCC...AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237653.2 |
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| CDS-3UTR CAA 90 bp | TCATACAACCACAAAGGGGCAAGCGTTTGGATAATCATTTTACAACACAATCTTCAGGCTTCTAAGATGTaGCTCTTCTCAGAGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYNHKGASVWIIILQHNLQASKM*LFSEGL Trigger: GAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCTG...AAGATTGTGTTGTAAAATGATTATCCAAACGCTTGCCCCTTTGTGGTTGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 72 bp | CTGCTGATGGGGACCGGATCTCAGCCCCACACACCATaGACAGCGCCCGTCCACTGCCTCCTGGGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLMGTGSQPHTP*TAPVHCLLGCS Trigger: GGAACAGCCCAGGAGGCAGTGGACGGGCGCTGTGCATGGTGTGTGGGGCTGAGATCCGGTCCCCATCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CAA 90 bp | ACCTGCTTCCAGCAGGTTAGGCCGAGGTGGCGGCGTCTTTTCCTGTaGGGTTACTCGGAGCATCGGCTCGGGCCGCGGGATCACGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TCFQQVRPRWRRLFL*GYSEHRLGPRDHGH Trigger: GTGGCCGTGATCCCGCGGCCCGAGCCGATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCTGGAAGCAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 72 bp | TCTCAGCCCCACACACCATGCACAGCGCCCGTCCACTaGCTCCTGGGCTGTTCCCCACCAGGAACTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPHTPCTAPVH*LLGCSPPGTPA Trigger: AGCAGGAGTTCCTGGTGGGGAACAGCCCAGGAGGCAGTGGACGGGCGCTGTGCATGGTGTGTGGGGCTGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 72 bp | AGCAGGTTAGGCCGAGGTGGCGGCGTCTTTTCCTGTTaGGTTACTCGGAGCATCGGCTCGGGCCGCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SRLGRGGGVFSC*VTRSIGSGRGI Trigger: GATCCCGCGGCCCGAGCCGATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 72 bp | GGATCCGGGTTGGAGATGGGGTCTGGCTGGCCATCCTaGCCTGACTCTAGGCTGGGCAGGGATGGCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGLEMGSGWPS*PDSRLGRDGWS Trigger: TGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGGCCAGCCAGACCCCATCTCCAACCCGGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CAA 72 bp | CAGCAGGTTAGGCCGAGGTGGCGGCGTCTTTTCCTGTaGGGTTACTCGGAGCATCGGCTCGGGCCGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QQVRPRWRRLFL*GYSEHRLGPRD Trigger: ATCCCGCGGCCCGAGCCGATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 72 bp | ACGGCTGGTGGTTCCTCCATCCGAACACGGATAACCTaGAGATCCAGTGTCCCACGGAGCCCCGGAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAGGSSIRTRIT*RSSVPRSPGGE Trigger: CTCCCCTCCGGGGCTCCGTGGGACACTGGATCTCCAGGTTATCCGTGTTCGGATGGAGGAACCACCAGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CAA 72 bp | TCACCTGTTCCCACCCCCTTGGTGCCCTGGGGGTGCTaGGACCAGTCCTGTAAGAGGCTGACGGCTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVPTPLVPWGC*DQSCKRLTAGG Trigger: ACCACCAGCCGTCAGCCTCTTACAGGACTGGTCCAAGCACCCCCAGGGCACCAAGGGGGTGGGAACAGGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 72 bp | TTGTCACCTGTTCCCACCCCCTTGGTGCCCTGGGGGTaGTTGGACCAGTCCTGTAAGAGGCTGACGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LSPVPTPLVPWG*LDQSCKRLTAG Trigger: ACCAGCCGTCAGCCTCTTACAGGACTGGTCCAAGCACCCCCAGGGCACCAAGGGGGTGGGAACAGGTGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 72 bp | TGGGGTCTGGCTGGCCATCCTGGCCTGACTCTAGGCTaGGCAGGGATGGCTGGTCAGCTTGGATGTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: WGLAGHPGLTLG*AGMAGQLGCLA Trigger: TGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGGCCAGCCAGACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CAA 90 bp | AGGGGGCGGAGTCCTCTGGGCCGGAGCCTCTTAGGAAGGGATGGGTaGTCCTCGGAATCCAAGAGGACCACTATCTCTGCTGGCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGRSPLGRSLLGRDG*SSESKRTTISAGIL Trigger: CAGGATGCCAGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGGCTCCGGCCCAGAGGACTCCGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS GCA 72 bp | CCACTGCCTCCTGGGCTGTTCCCCACCAGGAACTCCTaGTCCCATGACACTTGCTGCTTGAGCTCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PLPPGLFPTRNS*SHDTCCLSSSQ Trigger: CTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAGCCCAGGAGGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 72 bp | CCATCCTGGCCTGACTCTAGGCTGGGCAGGGATGGCTaGTCAGCTTGGATGTCTTGCAGAAGGGCAACCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSWPDSRLGRDG*SAWMSCRRATP Trigger: AGGGGTTGCCCTTCTGCAAGACATCCAAGCTGACCAGCCATCCCTGCCCAGCCTAGAGTCAGGCCAGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS GCA 72 bp | CACTTGCTGCTTGAGCTCCTCACAGCCTTCAACACCTaGTTCCAGCAGGTTAGGCCGAGGTGGCGGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HLLLELLTAFNT*FQQVRPRWRRL Trigger: AAGACGCCGCCACCTCGGCCTAACCTGCTGGAAGCAGGTGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS CCA 72 bp | GCGGAGTCCTCTGGGCCGGAGCCTCTTAGGAAGGGATaGGTTGTCCTCGGAATCCAAGAGGACCACTATCTC | + |
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Preference number: 6 (lower is better) Translates to: AESSGPEPLRKG*VVLGIQEDHYL Trigger: GAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGGCTCCGGCCCAGAGGACTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CCA 72 bp | GCCTTCAACACCTGCTTCCAGCAGGTTAGGCCGAGGTaGCGGCGTCTTTTCCTGTTGGGTTACTCGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AFNTCFQQVRPR*RRLFLLGYSEH Trigger: ATGCTCCGAGTAACCCAACAGGAAAAGACGCCGCCACCTCGGCCTAACCTGCTGGAAGCAGGTGTTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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| CDS GCA 72 bp | CTGTTCCCCACCAGGAACTCCTGCTCCCATGACACTTaGTGCTTGAGCTCCTCACAGCCTTCAACACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LFPTRNSCSHDT*CLSSSQPSTPA Trigger: AGCAGGTGTTGAAGGCTGTGAGGAGCTCAAGCAGCAAGTGTCATGGGAGCAGGAGTTCCTGGTGGGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS GCA 72 bp | GAAGGGCAACCCCTTCACTCCAGGCTTCTAAGATGTTaGTCTTCTCAGAGGGGCTCAGGTCCAGGGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EGQPLHSRLLRC*SSQRGSGPGCE Trigger: CTCACACCCTGGACCTGAGCCCCTCTGAGAAGAGCAACATCTTAGAAGCCTGGAGTGAAGGGGTTGCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS CAA 72 bp | AGTCCTCTGGGCCGGAGCCTCTTAGGAAGGGATGGGTaGTCCTCGGAATCCAAGAGGACCACTATCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SPLGRSLLGRDG*SSESKRTTISA Trigger: AGCAGAGATAGTGGTCCTCTTGGATTCCGAGGACAACCCATCCCTTCCTAAGAGGCTCCGGCCCAGAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025924.4 ENSMUST00000237653.2 |
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| CDS TCA 72 bp | TGCCTTTGGTTGTCCCTTAACAGTGGCACTGGATTCTaGCAGAACTGTGGGCCAGTCTGGCTTGTCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: CLWLSLNSGTGF*QNCGPVWLVTC Trigger: ACAGGTGACAAGCCAGACTGGCCCACAGTTCTGTCAGAATCCAGTGCCACTGTTAAGGGACAACCAAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025924.4 |
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