Pregenerated sensors for SPIN2G (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095659

Ensembl transcript IDs: ENSMUST00000178425.2, ENSMUST00000203586.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	ATGTTCCTTTTGAGCAGGGCTGGAGATCTGCTCCTCTaGCTCTTCCGACCAGCTCTTTTCTTGGTCAGCTTT	+
Preference number: 6 (lower is better) Translates to: MFLLSRAGDLLL*LFRPALFLVSF Trigger: AAAGCTGACCAAGAAAAGAGCTGGTCGGAAGAGGCAGAGGAGCAGATCTCCAGCCCTGCTCAAAAGGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203586.2
CDS TCA 72 bp	TATTTAACCAGGTACAGGGAAGGGTTTACTGGCACCTaGTCCAGCACAGTTCCATTCCACTGTGTGATAGAC	+
Preference number: 6 (lower is better) Translates to: YLTRYREGFTGT*SSTVPFHCVID Trigger: GTCTATCACACAGTGGAATGGAACTGTGCTGGATCAGGTGCCAGTAAACCCTTCCCTGTACCTGGTTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178425.2 ENSMUST00000203586.2
CDS CAA 72 bp	AAGCTGGAATCAGTGACTCCGGAAGATACCACCCTCTaGGCGATAACTTTTAGGGACAATACCCTCTTATCT	+
Preference number: 6 (lower is better) Translates to: KLESVTPEDTTL*AITFRDNTLLS Trigger: AGATAAGAGGGTATTGTCCCTAAAAGTTATCGCCAAGAGGGTGGTATCTTCCGGAGTCACTGATTCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178425.2 ENSMUST00000203586.2

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