Pregenerated sensors for SPIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021395Ensembl transcript IDs: ENSMUST00000095797.6
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAATGCATGCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTaGCAGGCCCAGGAGTCTGTCACCATTAAGGGTGGTGGAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: AMHADLNCEPKGSPR*QAQESVTIKGGGSH Trigger: GTGGCTTCCACCACCCTTAATGGTGACAGACTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATGCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CCA 90 bp | GCATGCAGGACGTACTCACACCCACTTGTGCCACAGATGACAGCATaGGCTGTGAGTCAGACTCAGCTCGGAGATTTACATGCAGGACGA | + |
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Preference number: 1 (lower is better) Translates to: ACRTYSHPLVPQMTA*AVSQTQLGDLHAGR Trigger: TCGTCCTGCATGTAAATCTCCGAGCTGAGTCTGACTCACAGCCCATGCTGTCATCTGTGGCACAAGTGGGTGTGAGTACGTCCTGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CCA 90 bp | TTAGAGCGTGCACAGTCCCTTCGAATGCTGCGTGACATATACAACTaGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTC | + |
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Preference number: 1 (lower is better) Translates to: LERAQSLRMLRDIYN*NHLRSALRLLHQFV Trigger: GACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTATATGTCACGCAGCATTCGAAGGGACTGTGCACGCTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | GCAACTGTGATCTTTAGAGCGTGCACAGTCCCTTCGAATGCTGCGTaGCATATACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCT | + |
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Preference number: 1 (lower is better) Translates to: ATVIFRACTVPSNAA*HIQLESPSVGATTA Trigger: AGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTATATGTCACGCAGCATTCGAAGGGACTGTGCACGCTCTAAAGATCACAGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR GCA 90 bp | CCCCCTCACACAGATGCTTTGAAGAGGGAGGACTCCCCTCACAGATaGCTTGTGTTCGAATCAGTCTGCACTATTCAGAACAACACCAGC | + |
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Preference number: 1 (lower is better) Translates to: PPHTDALKREDSPHR*LVFESVCTIQNNTS Trigger: GCTGGTGTTGTTCTGAATAGTGCAGACTGATTCGAACACAAGGCATCTGTGAGGGGAGTCCTCCCTCTTCAAAGCATCTGTGTGAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | GGATGGTCTGCTTTAAGGTTCTTCTCTGAAGTTTACGTGGCAGCCTaGCGTCACACACGCACGCACACACGATACGATACTAGAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: GWSALRFFSEVYVAA*RHTRTHTRYDTRAG Trigger: ACCTGCTCTAGTATCGTATCGTGTGTGCGTGCGTGTGTGACGTCAGGCTGCCACGTAAACTTCAGAGAAGAACCTTAAAGCAGACCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | GAAGAGAGCATGCAAAAATGGATGGTCTGCTTTAAGGTTCTTCTCTaGAGTTTACGTGGCAGCCTGACGTCACACACGCACGCACACACG | + |
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Preference number: 1 (lower is better) Translates to: EESMQKWMVCFKVLL*SLRGSLTSHTHAHT Trigger: CGTGTGTGCGTGCGTGTGTGACGTCAGGCTGCCACGTAAACTTCAGAGAAGAACCTTAAAGCAGACCATCCATTTTTGCATGCTCTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | GCCAAGGACAGAACTGAGGTACTATGTTCACATGGTGAGCAGTTGTaGCCACCCAGCAGTGTAAGGTGGTCAGCCTCTGTGAAAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: AKDRTEVLCSHGEQL*PPSSVRWSASVKTK Trigger: TTTAGTTTTCACAGAGGCTGACCACCTTACACTGCTGGGTGGTCACAACTGCTCACCATGTGAACATAGTACCTCAGTTCTGTCCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | ATCAACATTCAGATACCAGAACAATGCAAGCAATGCATGCAGATCTaGACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGGCCCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: INIQIPEQCKQCMQI*TVSLREVQGGRPRS Trigger: ACTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATGCATTGCTTGCATTGTTCTGGTATCTGAATGTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | CGTCACACACGCACGCACACACGATACGATACTAGAGCAGGTAAGTaGAGAAGGCCAGTAAATTTTATACACAGATTCACGGCCCGTGTT | + |
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Preference number: 1 (lower is better) Translates to: RHTRTHTRYDTRAGK*RRPVNFIHRFTARV Trigger: AACACGGGCCGTGAATCTGTGTATAAAATTTACTGGCCTTCTTCACTTACCTGCTCTAGTATCGTATCGTGTGTGCGTGCGTGTGTGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | ACACGAAGACCTCTGAACTCTACTCATTCGTTCGAACTGCACCAATaGTGGAAACTACAGAGAGCGCAGCATTCCCAAGGAACACAGACA | + |
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Preference number: 1 (lower is better) Translates to: TRRPLNSTHSFELHQ*WKLQRAQHSQGTQT Trigger: TGTCTGTGTTCCTTGGGAATGCTGCGCTCTCTGTAGTTTCCATCATTGGTGCAGTTCGAACGAATGAGTAGAGTTCAGAGGTCTTCGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR GCA 90 bp | GACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCTaGACCGTTAGTGCATGCAGGACGTACTCACACCCACTTGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: DTSKGVLLSSHHAMF*TVSACRTYSHPLVP Trigger: TGGCACAAGTGGGTGTGAGTACGTCCTGCATGCACTAACGGTGCAGAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CCA 90 bp | TCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGAGAAACTaGTTTTTACAAACCATCTTTCTACCAGCTGACAAGCTACCATGG | + |
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Preference number: 1 (lower is better) Translates to: SKTVQPQIGSTSVRN*FLQTIFLPADKLPW Trigger: CCATGGTAGCTTGTCAGCTGGTAGAAAGATGGTTTGTAAAAACCAGTTTCTCACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | TCTTTCTACCAGCTGACAAGCTACCATGGTTCTTCCAAAACAAAGTaGGAGCAAGCAGATGTTTGGCTAGTCTACCAACTGCATTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SFYQLTSYHGSSKTK*EQADVWLVYQLHFS Trigger: ACTGAAATGCAGTTGGTAGACTAGCCAAACATCTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGCTGGTAGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR TCA 90 bp | AACCTCCGTGAGAAACTGGTTTTTACAAACCATCTTTCTACCAGCTaGCAAGCTACCATGGTTCTTCCAAAACAAAGTGAGAGCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NLREKLVFTNHLSTS*QATMVLPKQSESKQ Trigger: CTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGCTGGTAGAAAGATGGTTTGTAAAAACCAGTTTCTCACGGAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CCA 90 bp | AACTGGTTTTTACAAACCATCTTTCTACCAGCTGACAAGCTACCATaGTTCTTCCAAAACAAAGTGAGAGCAAGCAGATGTTTGGCTAGT | + |
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Preference number: 1 (lower is better) Translates to: NWFLQTIFLPADKLP*FFQNKVRASRCLAS Trigger: ACTAGCCAAACATCTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGCTGGTAGAAAGATGGTTTGTAAAAACCAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CCA 90 bp | CTTTTAAGTCCATGTACTAAGATCCCGATGACAGGTGTGTACAAATaGACCAATGTGCCATCTAAAAACACATCTTTATTATTCCATGTG | + |
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Preference number: 1 (lower is better) Translates to: LLSPCTKIPMTGVYK*TNVPSKNTSLLFHV Trigger: CACATGGAATAATAAAGATGTGTTTTTAGATGGCACATTGGTCCATTTGTACACACCTGTCATCGGGATCTTAGTACATGGACTTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR GCA 90 bp | AGGCCATCCTTAAAACTTACATTTCTAATACAAATGCACTGTTCTTaGAGGAATTCACCACATATACAAACCATTGATGTAGTGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RPSLKLTFLIQMHCS*RNSPHIQTIDVVLP Trigger: AGGCAACACTACATCAATGGTTTGTATATGTGGTGAATTCCTGCAAGAACAGTGCATTTGTATTAGAAATGTAAGTTTTAAGGATGGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGGCCCAGGAGCATGGTGAGCAGTTGTaGCCACCCAGCAGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: HADLNCEPKGSPRWQAQEHGEQL*PPSSVR Trigger: CCTTACACTGCTGGGTGGTCACAACTGCTCACCATG...CTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGGCCCAGGAGTATATCATACTGCCTTaGGAAGCCTGTCCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: HADLNCEPKGSPRWQAQEYIILP*EACPWC Trigger: GCACCAGGGACAGGCTTCTCAAGGCAGTATGATATA...CTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACACACCAGCTCTGCTGGTaGAGATTGTGGGTTCGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VGATTASPVRLYPTTTRTHQLCW*RLWVRR Trigger: CCTGCGAACCCACAATCTCCACCAGCAGAGCTGGTG...TGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAGTCGTAGCGCCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACACAACACCAGCTCTGCTaGTGGAGATTGTGGGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: VGATTASPVRLYPTTTRTQHQLC*WRLWVR Trigger: GCGAACCCACAATCTCCACCAGCAGAGCTGGTGTTG...TGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAGTCGTAGCGCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGGCCCAGGAGGTCAAGCACTCCTGTTaGACTGGAGAAAACGTTATC | + |
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Preference number: 2 (lower is better) Translates to: HADLNCEPKGSPRWQAQEVKHSC*TGENVI Trigger: GATAACGTTTTCTCCAGTTCAACAGGAGTGCTTGAC...CTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAAGTCCAAGGTGGCAGGCCCAGGAGTCTGTCACCATTAAGGGTGGTGGACTTTATTATTCCATGTaGACCAAGGACCTGGGTCGT | + |
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Preference number: 2 (lower is better) Translates to: KGSPRWQAQESVTIKGGGLYYSM*TKDLGR Trigger: ACGACCCAGGTCCTTGGTTCACATGGAATAATAAAG...TCCACCACCCTTAATGGTGACAGACTCCTGGGCCTGCCACCTTGGACTTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACAGCACAGTAAGCAAGTTTACGTGGCAGCCTaGCGTCACACACGCACGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLHQFVFTLQPLEQHSKQVYVAA*RHTRTH Trigger: GTGCGTGCGTGTGTGACGTCAGGCTGCCACGTAAAC...TTGCTTACTGTGCTGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | GTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACAGGCAGGAACAGACACTaGCACAACAGGATCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VGATTASPVRLYPTTTRTGRNRH*HNRIKA Trigger: TGCCTTGATCCTGTTGTGGCAGTGTCTGTTCCTGCC...TGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAGTCGTAGCGCCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTCCACAGATGACAGCATaGGCTGTGAGTCAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: YNWNHLRSALRLLHQFVFPQMTA*AVSQTQ Trigger: CTGAGTCTGACTCACAGCCCATGCTGTCATCTGTGG...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAAGTCCAAGGTGGCAGGCCCAGGAGTCTGTCACCATTAAGGGTGGTGGAGTGTTCGAATCAGTCTaGACTATTCAGAACAACACC | + |
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Preference number: 2 (lower is better) Translates to: KGSPRWQAQESVTIKGGGVFESV*TIQNNT Trigger: GGTGTTGTTCTGAATAGTGCAGACTGATTCGAACAC...TCCACCACCCTTAATGGTGACAGACTCCTGGGCCTGCCACCTTGGACTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 90 bp | AAGCCTGTCCCTGGTGCCTATGAGAAAACACTGAGCACACAACGATaGCAGCCAAGGACAGAACTGAGGTACTATGTTCACATGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KPVPGAYEKTLSTQR*QPRTELRYYVHMVS Trigger: GCTCACCATGTGAACATAGTACCTCAGTTCTGTCCTTGGCTGCAATCGTTGTGTGCTCAGTGTTTTCTCATAGGCACCAGGGACAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGGACTCCCCTCACAGATaGCTTGTGTTCGAATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VCLTVSKTVQPQIGSTSVDSPHR*LVFESV Trigger: GACTGATTCGAACACAAGGCATCTGTGAGGGGAGTC...CACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGGCAATAAATGGAATCGTGATCAAAATCATCCCCGTCCTCACGCTTTCCAAGGAGAGCCAGCGGTaGGTGCCTCTGTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: VKAINGIVIKIIPVLTLSKESQR*VPLCVY Trigger: ATACACACACAGAGGCACTCACCGCTGGCTCTCCTT...GGAAAGCGTGAGGACGGGGATGATTTTGATCACGATTCCATTTATTGCCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTCATCTTTCTACCAGCTaGCAAGCTACCATGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YNWNHLRSALRLLHQFVFHLSTS*QATMVL Trigger: AAGAACCATGGTAGCTTGTCAGCTGGTAGAAAGATG...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTAAATTTTATACACAGATTCACGGCCCGTGTTGCCACAAGCCCCATGAAACTTGGCCAAGCCTCTaGTGTTTGCTTGACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: ASKFYTQIHGPCCHKPHETWPSL*CLLDSI Trigger: GATACTGTCAAGCAAACACCAGAGGCTTGGCCAAGT...TTCATGGGGCTTGTGGCAACACGGGCCGTGAATCTGTGTATAAAATTTACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 90 bp | CCCCAACTAGGTAATTGTAACTATACTTGGCCAAGCCTCTGGTGTTaGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PQLGNCNYTWPSLWC*LDSIQDCPATDRFN Trigger: GTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAACACCAGAGGCTTGGCCAAGTATAGTTACAATTACCTAGTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTGGGACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCCATAACTGGCAAGCATaGCCTTCCCAGCGACACACA | + |
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Preference number: 2 (lower is better) Translates to: SPWDTSKGVLLSSHHAMFHNWQA*PSQRHT Trigger: TGTGTGTCGCTGGGAAGGTCATGCTTGCCAGTTATG...GAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTCCCAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCAGAGCCAGCGGTGAGTaGCTCTGTGTGTGTATAATA | + |
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Preference number: 2 (lower is better) Translates to: NRHCHNRIKARSHTGLTFRASGE*LCVCII Trigger: TATTATACACACACAGAGGCACTCACCGCTGGCTCT...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGACTATGCTTGCATTGTaGCAGCAGAATAAGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: VCLTVSKTVQPQIGSTSVTMLAL*QQNKTV Trigger: CACTGTCTTATTCTGCTGCCACAATGCAAGCATAGT...CACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTGTCATCTTTGGAGGACTTTCATCTCTTAGACAATCAGTGTTAAGTGTTCTCACACAGATGCTTTaGAGAGGGAGGACTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SCVIFGGLSSLRQSVLSVLTQML*RGRTPL Trigger: GAGGGGAGTCCTCCCTCTTCAAAGCATCTGTGTGAG...AACACTTAACACTGATTGTCTAAGAGATGAAAGTCCTCCAAAGATGACACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTAAATTTTATACACAGATTCACGGCCCGTGTTGCCACAAGCCCCATGAATGGCTAATTTATACCTaGACTCAGCTAAAAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ASKFYTQIHGPCCHKPHEWLIYT*TQLKAS Trigger: GGAGGCTTTTAGCTGAGTCCAGGTATAAATTAGCCA...TTCATGGGGCTTGTGGCAACACGGGCCGTGAATCTGTGTATAAAATTTACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGACTACTGTGGGTCATTaGCTGTTTATGGCTAATTTA | + |
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Preference number: 2 (lower is better) Translates to: VCLTVSKTVQPQIGSTSVTTVGH*LFMANL Trigger: TAAATTAGCCATAAACAGTCAATGACCCACAGTAGT...CACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGTTTAAGGTTCTTCTCTaGAGTTTACGTGGCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLFKVLL*SLRGSL Trigger: CAGGCTGCCACGTAAACTTCAGAGAAGAACCTTAAA...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTACAAATGGACCAATGTaGCATCTAAAAACACATCTT | + |
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Preference number: 2 (lower is better) Translates to: YNWNHLRSALRLLHQFVFTNGPM*HLKTHL Trigger: AAGATGTGTTTTTAGATGGCACATTGGTCCATTTGT...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGCACAGTCCCTTCGAATaGTGCGTGACATATACAACT | + |
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Preference number: 2 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLHSPFE*CVTYTT Trigger: AGTTGTATATGTCACGCAGCATTCGAAGGGACTGTG...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR CCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTGTCATTGACTGTTTATaGCTAATTTATACCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: YNWNHLRSALRLLHQFVFVIDCL*LIYTWT Trigger: AGTCCAGGTATAAATTAGCCATAAACAGTCAATGAC...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGGCAATAAATGGAATCGTGATCAAAATCATCCCCGTCCTCACGCTTTCCTCTTCCAAAACAAAGTaGGAGCAAGCAGATGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VKAINGIVIKIIPVLTLSSSKTK*EQADVW Trigger: CCAAACATCTGCTTGCTCTCACTTTGTTTTGGAAGA...GGAAAGCGTGAGGACGGGGATGATTTTGATCACGATTCCATTTATTGCCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR-3UTR TCA 90 bp | GAAACTACAGAGAGCGCAGCATTCCCAAGGAACACAGACATTTCCACCACAATTACTAGAGCAGGTAAGTaGAGAAGGCCAGTAAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: ETTESAAFPRNTDISTTITRAGK*RRPVNF Trigger: AAAATTTACTGGCCTTCTTCACTTACCTGCTCTAGT...AATTGTGGTGGAAATGTCTGTGTTCCTTGGGAATGCTGCGCTCTCTGTAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGTGTCATCTTTGGAGGACTTTCATCTCTTAGACAATCAGTGTTAAGTGTTGAACAACACCAGCTCTaGTGGTGGAGATTGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SCVIFGGLSSLRQSVLSVEQHQL*WWRLWV Trigger: AACCCACAATCTCCACCAGCAGAGCTGGTGTTGTTC...AACACTTAACACTGATTGTCTAAGAGATGAAAGTCCTCCAAAGATGACACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CCA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCACAGGTGTGTACAAATaGACCAATGTGCCATCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRHCHNRIKARSHTGLTFTGVYK*TNVPSK Trigger: TTTAGATGGCACATTGGTCCATTTGTACACACCTGT...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CAA 90 bp | TATCCAGGTTTAAATGACTATGATACTAGCTTAACGTTTACCACCTaGCTTGTAACCCCCAACAGACAGCTTTCTTGTAAGAGGGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: YPGLNDYDTSLTFTT*LVTPNRQLSCKRED Trigger: GTCTTCCCTCTTACAAGAAAGCTGTCTGTTGGGGGTTACAAGCAAGGTGGTAAACGTTAAGCTAGTATCATAGTCATTTAAACCTGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CAA 90 bp | ATACACAGATTCACGGCCCGTGTTGCCACAAGCCCCATGAAAATTTaGGAAATTAATGCTGAACTCCTAAATGAGGAATCAACATTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: IHRFTARVATSPMKI*EINAELLNEESTFR Trigger: TCTGAATGTTGATTCCTCATTTAGGAGTTCAGCATTAATTTCCAAAATTTTCATGGGGCTTGTGGCAACACGGGCCGTGAATCTGTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGTGTCATCTTTGGAGGACTTTCATCTCTTAGACAATCAGTGTTAAGTGTTAGGCACTACAATTTGTaGCGGTCAGAACAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SCVIFGGLSSLRQSVLSVRHYNL*RSEQSS Trigger: GGAAGATTGTTCTGACCGTCACAAATTGTAGTGCCT...AACACTTAACACTGATTGTCTAAGAGATGAAAGTCCTCCAAAGATGACACAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACAGCACAGTAAGCAAAAAAATAACAAACTATaGTTGCATTGTGGCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLHQFVFTLQPLEQHSKQKNNKL*LHCGSR Trigger: TCTGCTGCCACAATGCAAGCATAGTTTGTTATTTTT...TTGCTTACTGTGCTGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR GCA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCTCTGTGTGCTTCCTGTaGCCAAATTTAATTTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NRHCHNRIKARSHTGLTFSVCFL*PNLILN Trigger: GTTTAAAATTAAATTTGGGCACAGGAAGCACACAGA...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR GCA 90 bp | AGTCCTTGGGACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCCTAAATGTCTCTGTGTaGTTCCTGTGCCCAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: SPWDTSKGVLLSSHHAMFLNVSV*FLCPNL Trigger: TAAATTTGGGCACAGGAAGCACACAGAGACATTTAG...GAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTCCCAAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGCAAATGCACTGTTCTTaGAGGAATTCACCACATATA | + |
|
Preference number: 2 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLQMHCS*RNSPHI Trigger: TATATGTGGTGAATTCCTGCAAGAACAGTGCATTTG...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGAGAGTGAAGGGAAAATaGTTACAATCTATCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLRVKGK*LQSIQV Trigger: AACCTGGATAGATTGTAACCATTTTCCCTTCACTCT...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CCA 90 bp | AGGAATCAACATTCAGATACCAGAACAATGCAAGCAATGCATGCAGATCTGAACGCCTCCAGACTGAAATaGTACTCAGAAATTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: RNQHSDTRTMQAMHADLNASRLK*YSEILT Trigger: AGTCAGAATTTCTGAGTACCATTTCAGTCTGGAGGC...GTTCAGATCTGCATGCATTGCTTGCATTGTTCTGGTATCTGAATGTTGATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CAA 90 bp | AAGCTACCATGGTTCTTCCAAAACAAAGTGAGAGCAAGCAGATGTTaGGCTAGTCTACCAACTGCATTTCAGTTCTATTTCAGCTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KLPWFFQNKVRASRC*ASLPTAFQFYFSFK Trigger: CTTAAAGCTGAAATAGAACTGAAATGCAGTTGGTAGACTAGCCAAACATCTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTGTCATCTTTGGAGGACTTTCATCTCTTAGACAATCAGTGTTAAGTGTTGCTGACAAGCTACCATaGTTCTTCCAAAACAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SCVIFGGLSSLRQSVLSVADKLP*FFQNKV Trigger: CACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGC...AACACTTAACACTGATTGTCTAAGAGATGAAAGTCCTCCAAAGATGACACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CAA 90 bp | AAATGGATAGCCAATAACCATGTGCCTCGAACAGTGAAAAATTTCTaGCATCAGGAAGAACCCCAACTAGGTAATTGTAACTATACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KWIANNHVPRTVKNF*HQEEPQLGNCNYTW Trigger: CCAAGTATAGTTACAATTACCTAGTTGGGGTTCTTCCTGATGCAAGAAATTTTTCACTGTTCGAGGCACATGGTTATTGGCTATCCATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | GCAAAGCCCGGAGGCCATGGAGGGAATAAACCTGCGTaGATAGCACACCTGGGGCAGGAACAGACACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AKPGGHGGNKPA*IAHLGQEQTLP Trigger: TGGCAGTGTCTGTTCCTGCCCCAGGTGTGCTATTCACGCAGGTTTATTCCCTCCATGGCCTCCGGGCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | GCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTaGCAGGCCCAGGAGTCTGTCACCATTAAGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ADLNCEPKGSPR*QAQESVTIKGG Trigger: ACCACCCTTAATGGTGACAGACTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | GGCGAAGAGCTGCGATCCACCCATAACTGGCAAGCATaGCCTTCCCAGCGACACACACATCATAGACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GEELRSTHNWQA*PSQRHTHHRHA Trigger: TGCATGTCTATGATGTGTGTGTCGCTGGGAAGGTCATGCTTGCCAGTTATGGGTGGATCGCAGCTCTTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | GCACAGTCCCTTCGAATGCTGCGTGACATATACAACTaGAATCACCTTCGGTCGGCGCTACGACTGCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AQSLRMLRDIYN*NHLRSALRLLH Trigger: GTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTATATGTCACGCAGCATTCGAAGGGACTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | AGAACTGAGGTACTATGTTCACATGGTGAGCAGTTGTaGCCACCCAGCAGTGTAAGGTGGTCAGCCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RTEVLCSHGEQL*PPSSVRWSASV Trigger: CACAGAGGCTGACCACCTTACACTGCTGGGTGGTCACAACTGCTCACCATGTGAACATAGTACCTCAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | ATCTTTAGAGCGTGCACAGTCCCTTCGAATGCTGCGTaGCATATACAACTGGAATCACCTTCGGTCGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: IFRACTVPSNAA*HIQLESPSVGA Trigger: AGCGCCGACCGAAGGTGATTCCAGTTGTATATGTCACGCAGCATTCGAAGGGACTGTGCACGCTCTAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | ACGTACTCACACCCACTTGTGCCACAGATGACAGCATaGGCTGTGAGTCAGACTCAGCTCGGAGATTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TYSHPLVPQMTA*AVSQTQLGDLH Trigger: ATGTAAATCTCCGAGCTGAGTCTGACTCACAGCCCATGCTGTCATCTGTGGCACAAGTGGGTGTGAGTACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGCTCTGCTGGTGGAGATaGTGGGTTCGCAGGGACATC | + |
|
Preference number: 3 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLLCWWR*WVRRDI Trigger: GATGTCCCTGCGAACCCACAATCTCCACCAGCAGAG...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | CAGATACCAGAACAATGCAAGCAATGCATGCAGATCTaGACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QIPEQCKQCMQI*TVSLREVQGGR Trigger: CCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATGCATTGCTTGCATTGTTCTGGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | GCTTTAAGGTTCTTCTCTGAAGTTTACGTGGCAGCCTaGCGTCACACACGCACGCACACACGATACGATACT | + |
|
Preference number: 3 (lower is better) Translates to: ALRFFSEVYVAA*RHTRTHTRYDT Trigger: AGTATCGTATCGTGTGTGCGTGCGTGTGTGACGTCAGGCTGCCACGTAAACTTCAGAGAAGAACCTTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | CCTCTGAACTCTACTCATTCGTTCGAACTGCACCAATaGTGGAAACTACAGAGAGCGCAGCATTCCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLNSTHSFELHQ*WKLQRAQHSQG Trigger: TCCTTGGGAATGCTGCGCTCTCTGTAGTTTCCATCATTGGTGCAGTTCGAACGAATGAGTAGAGTTCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR GCA 72 bp | ACAGATGCTTTGAAGAGGGAGGACTCCCCTCACAGATaGCTTGTGTTCGAATCAGTCTGCACTATTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TDALKREDSPHR*LVFESVCTIQN Trigger: GTTCTGAATAGTGCAGACTGATTCGAACACAAGGCATCTGTGAGGGGAGTCCTCCCTCTTCAAAGCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | AGACTCAGCTCGGAGATTTACATGCAGGACGACACCTaGTCACATATACTAGAGGCACCAAAGACTAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RLSSEIYMQDDT*SHILEAPKTRV Trigger: TACCCTAGTCTTTGGTGCCTCTAGTATATGTGACCAGGTGTCGTCCTGCATGTAAATCTCCGAGCTGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTATAAATATGACTGACTaGGGTCAAGCACTCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YNWNHLRSALRLLHQFVFINMTD*GQALLL Trigger: CAACAGGAGTGCTTGACCCAAGTCAGTCATATTTAT...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR GCA 72 bp | AAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCTaGACCGTTAGTGCATGCAGGACGTACTCACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KGVLLSSHHAMF*TVSACRTYSHP Trigger: TGGGTGTGAGTACGTCCTGCATGCACTAACGGTGCAGAACATGGCATGGTGACTAGAAAGTAAAACTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | CAGCTGACAAGCTACCATGGTTCTTCCAAAACAAAGTaGGAGCAAGCAGATGTTTGGCTAGTCTACCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLTSYHGSSKTK*EQADVWLVYQL Trigger: CAGTTGGTAGACTAGCCAAACATCTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | GTCCAGCCACAGATAGGTTCAACCTCCGTGAGAAACTaGTTTTTACAAACCATCTTTCTACCAGCTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VQPQIGSTSVRN*FLQTIFLPADK Trigger: CTTGTCAGCTGGTAGAAAGATGGTTTGTAAAAACCAGTTTCTCACGGAGGTTGAACCTATCTGTGGCTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTAAATTTTATACACAGATTCACGGCCCGTGTTGCCACAAGCCCCATGAAAAACAAAGCTTAGAATaGAAGGCAGCCTTTTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASKFYTQIHGPCCHKPHEKQSLE*KAAFYP Trigger: TGGGTAAAAGGCTGCCTTCAATTCTAAGCTTTGTTT...TTCATGGGGCTTGTGGCAACACGGGCCGTGAATCTGTGTATAAAATTTACTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAAAGTTAACTGAGGTGGCTTGTAGAAAACCACAATGTAAGTCATCAGATCTGAGCACACAACGATaGCAGCCAAGGACAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: EPKLTEVACRKPQCKSSDLSTQR*QPRTEL Trigger: CAGTTCTGTCCTTGGCTGCAATCGTTGTGTGCTCAG...ATCTGATGACTTACATTGTGGTTTTCTACAAGCCACCTCAGTTAACTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | CGCACGCACACACGATACGATACTAGAGCAGGTAAGTaGAGAAGGCCAGTAAATTTTATACACAGATTCACG | + |
|
Preference number: 3 (lower is better) Translates to: RTHTRYDTRAGK*RRPVNFIHRFT Trigger: CGTGAATCTGTGTATAAAATTTACTGGCCTTCTTCACTTACCTGCTCTAGTATCGTATCGTGTGTGCGTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | CAGGAAGAACCCCAACTAGGTAATTGTAACTATACTTaGCCAAGCCTCTGGTGTTTGCTTGACAGTATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QEEPQLGNCNYT*PSLWCLLDSIQ Trigger: TTGGATACTGTCAAGCAAACACCAGAGGCTTGGCCAAGTATAGTTACAATTACCTAGTTGGGGTTCTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | AGCAGTGTAAGGTGGTCAGCCTCTGTGAAAACTAAATaGATAGCCAATAACCATGTGCCTCGAACAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVRWSASVKTK*IANNHVPRTVK Trigger: TTTCACTGTTCGAGGCACATGGTTATTGGCTATCCATTTAGTTTTCACAGAGGCTGACCACCTTACACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAAAGTTAACTGAGGTGGCTTGTAGAAAACCACAATGTAAGTCATCAGATGTATATCATACTGCCTaGAGAAGCCTGTCCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EPKLTEVACRKPQCKSSDVYHTA*RSLSLV Trigger: CACCAGGGACAGGCTTCTCAAGGCAGTATGATATAC...ATCTGATGACTTACATTGTGGTTTTCTACAAGCCACCTCAGTTAACTTTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | CTGTGGGTCATTGACTGTTTATGGCTAATTTATACCTaGACTCAGCTAAAAGCCTCCAGACTGAAATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LWVIDCLWLIYT*TQLKASRLKWY Trigger: GTACCATTTCAGTCTGGAGGCTTTTAGCTGAGTCCAGGTATAAATTAGCCATAAACAGTCAATGACCCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR CCA 72 bp | TTACAAACCATCTTTCTACCAGCTGACAAGCTACCATaGTTCTTCCAAAACAAAGTGAGAGCAAGCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LQTIFLPADKLP*FFQNKVRASRC Trigger: ACATCTGCTTGCTCTCACTTTGTTTTGGAAGAACCATGGTAGCTTGTCAGCTGGTAGAAAGATGGTTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATCAACATTCAGATACCAGAACAATGCAAGCAATGCATGCAGATCTGAACACCATTGATGTAGTGTaGCCTTTTAAGTCCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RNQHSDTRTMQAMHADLNTIDVV*PFKSMY Trigger: GTACATGGACTTAAAAGGCAACACTACATCAATGGT...GTTCAGATCTGCATGCATTGCTTGCATTGTTCTGGTATCTGAATGTTGATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | TTTCTCAACAGTTTACTAAAGACTACTGTGGGTCATTaGCTGTTTATGGCTAATTTATACCTGGACTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLNSLLKTTVGH*LFMANLYLDSA Trigger: AGCTGAGTCCAGGTATAAATTAGCCATAAACAGTCAATGACCCACAGTAGTCTTTAGTAAACTGTTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| 3UTR TCA 72 bp | ATGTGCCATCTAAAAACACATCTTTATTATTCCATGTaGACCAAGGACCTGGGTCGTGGTTTAAAAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: MCHLKTHLYYSM*TKDLGRGLKVL Trigger: AAGTACTTTTAAACCACGACCCAGGTCCTTGGTTCACATGGAATAATAAAGATGTGTTTTTAGATGGCACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR GCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTCATGACAGGCGCCCGTaGCAAGACCATCCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNWNHLRSALRLLHQFVFHDRRP*QDHPPP Trigger: TGGAGGGGGATGGTCTTGGCACGGGCGCCTGTCATG...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR CCA 90 bp | GTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACAATGTTCCGCCGGGGTTaGGACACAGGCTTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGATTASPVRLYPTTTRTMFRRG*DTGLLG Trigger: ACCAAGCAAGCCTGTGTCCCAACCCCGGCGGAACAT...TGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAGTCGTAGCGCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTGGAATCACCTTCGGTCGGCGCTACGACTGCTTCACCAGTTCGTCTTTGCAGATACTCCAGCATaGCCTGCATCAGCTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YNWNHLRSALRLLHQFVFADTPA*PASALD Trigger: GTCCAGAGCTGATGCAGGCCATGCTGGAGTATCTGC...AAAGACGAACTGGTGAAGCAGTCGTAGCGCCGACCGAAGGTGATTCCAGTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR CCA 90 bp | GTTTGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGGGATTCACAGGCACCTaGTCCAGGACAGTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLTVSKTVQPQIGSTSVGFTGT*SRTVPF Trigger: GAAGGGGACTGTCCTGGACCAGGTGCCTGTGAATCC...CACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR CCA 90 bp | GAAACTACAGAGAGCGCAGCATTCCCAAGGAACACAGACATTTCCACCACAATTGGCCTGCATCAGCTCTaGACCGTTGGCCAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETTESAAFPRNTDISTTIGLHQL*TVGQVS Trigger: AGACACCTGGCCAACGGTCCAGAGCTGATGCAGGCC...AATTGTGGTGGAAATGTCTGTGTTCCTTGGGAATGCTGCGCTCTCTGTAGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAGATGCCTTGTGTTCGAATCAGTCTGCACTATTCAGAACAACACCAGATCCATGCTGGATCCTaGAGCCTACGATGTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSQMPCVRISLHYSEQHQIHAGS*SLRCSA Trigger: GGCGGAACATCGTAGGCTGCAGGATCCAGCATGGAT...CTGGTGTTGTTCTGAATAGTGCAGACTGATTCGAACACAAGGCATCTGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR GCA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCCCCTCTCTCCATCCATaGTGGATCCTGCAGCCTACG | + |
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Preference number: 4 (lower is better) Translates to: NRHCHNRIKARSHTGLTFPSLHP*WILQPT Trigger: CGTAGGCTGCAGGATCCAGCATGGATGGAGAGAGGG...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CCA 90 bp | CTGCTTCACCAGTTCGTCTTTACCCTACAACCACTAGAACAGCACAGTAAGCAAACAGTCCCCTTCCACTaGGTAACAGGGCCATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLHQFVFTLQPLEQHSKQTVPFH*VTGPLP Trigger: GGGCAATGGCCCTGTTACCCAGTGGAAGGGGACTGT...TTGCTTACTGTGCTGTTCTAGTGGTTGTAGGGTAAAGACGAACTGGTGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR GCA 90 bp | GTTTGCTTGACAGTATCCAAGACTGTCCAGCCACAGATAGGTTCAACCTCCGTGGCTGATCCGAGATGTTaGAACTCTATCAGGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: VCLTVSKTVQPQIGSTSVADPRC*NSIRED Trigger: GTCCTCCCTGATAGAGTTGCAACATCTCGGATCAGC...CACGGAGGTTGAACCTATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 72 bp | CTAGAGGCACCAAAGACTAGGGTATATCATACTGCCTaGAGAAGCCTGTCCCTGGTGCCTATGAGAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: LEAPKTRVYHTA*RSLSLVPMRKH Trigger: GTGTTTTCTCATAGGCACCAGGGACAGGCTTCTCAAGGCAGTATGATATACCCTAGTCTTTGGTGCCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTTCTAATGGGTCTACAGTGTTCAGAGATTCAGGCCCAATGCACTTTGTCTCTCCATCCATGCTaGATCCTGCAGCCTACGATG | + |
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Preference number: 4 (lower is better) Translates to: IFLLMGLQCSEIQAQCTLSLHPC*ILQPTM Trigger: CATCGTAGGCTGCAGGATCCAGCATGGATGGAGAGA...CAAAGTGCATTGGGCCTGAATCTCTGAACACTGTAGACCCATTAGAAGGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR TCA 90 bp | AGTCCTTGGGACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCCCTCTACTTGGTGGATaGCCATGCCAGTCCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: SPWDTSKGVLLSSHHAMFPLLGG*PCQSFS Trigger: CGAAAAGGACTGGCATGGTCATCCACCAAGTAGAGG...GAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTCCCAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CCA 90 bp | GAAACTACAGAGAGCGCAGCATTCCCAAGGAACACAGACATTTCCACCACAATTTCGAGCCGTCTTCTTTaGCATATTCCACTTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ETTESAAFPRNTDISTTISSRLL*HIPLAC Trigger: GCAAGCAAGTGGAATATGCCAAAGAAGACGGCTCGA...AATTGTGGTGGAAATGTCTGTGTTCCTTGGGAATGCTGCGCTCTCTGTAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR GCA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCAGGGAGGACTTCCAGTaGAGAAACTCTTTCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: NRHCHNRIKARSHTGLTFREDFQ*RNSFIL Trigger: AAGGATGAAAGAGTTTCTGCACTGGAAGTCCTCCCT...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR GCA 90 bp | AGTCCTTGGGACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCTGTGCTCCACTGCTTTaGCGATCATTGTGTCCGCTA | + |
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Preference number: 4 (lower is better) Translates to: SPWDTSKGVLLSSHHAMFCAPLL*RSLCPL Trigger: TAGCGGACACAATGATCGGCAAAGCAGTGGAGCACA...GAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTCCCAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 72 bp | GGTAATTGTAACTATACTTGGCCAAGCCTCTGGTGTTaGCTTGACAGTATCCAAGACTGTCCAGCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: GNCNYTWPSLWC*LDSIQDCPATD Trigger: ATCTGTGGCTGGACAGTCTTGGATACTGTCAAGCAAACACCAGAGGCTTGGCCAAGTATAGTTACAATTACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR TCA 90 bp | GAACCAAAGTTAACTGAGGTGGCTTGTAGAAAACCACAATGTAAGTCATCAGATCATTGGAATCAGGCATaGTGCGGAGGTCGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EPKLTEVACRKPQCKSSDHWNQA*CGGRLL Trigger: AAGAAGGCGACCTCCGCATCATGCCTGATTCCAATG...ATCTGATGACTTACATTGTGGTTTTCTACAAGCCACCTCAGTTAACTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR TCA 90 bp | TCCTGTGTCATCTTTGGAGGACTTTCATCTCTTAGACAATCAGTGTTAAGTGTTCTAAGTGTGCATCGCTaGTCCGAGATGTTGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SCVIFGGLSSLRQSVLSVLSVHR*SEMLQL Trigger: GAGTTGCAACATCTCGGATCAGCGATGCACACTTAG...AACACTTAACACTGATTGTCTAAGAGATGAAAGTCCTCCAAAGATGACACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CCA 90 bp | AGGCCTTCTGACCATAACCATGTATCAATAGTAGTAATCAAAATTACAAAGTCCTCAGCTCTGGACCGTTaGCCAGGTGTCTTCCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: RPSDHNHVSIVVIKITKSSALDR*PGVFPN Trigger: ATTCGGGAAGACACCTGGCCAACGGTCCAGAGCTGA...GGACTTTGTAATTTTGATTACTACTATTGATACATGGTTATGGTCAGAAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 72 bp | GCCAATAACCATGTGCCTCGAACAGTGAAAAATTTCTaGCATCAGGAAGAACCCCAACTAGGTAATTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: ANNHVPRTVKNF*HQEEPQLGNCN Trigger: GTTACAATTACCTAGTTGGGGTTCTTCCTGATGCAAGAAATTTTTCACTGTTCGAGGCACATGGTTATTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| 3UTR CAA 72 bp | TTAAATGACTATGATACTAGCTTAACGTTTACCACCTaGCTTGTAACCCCCAACAGACAGCTTTCTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LNDYDTSLTFTT*LVTPNRQLSCK Trigger: CTTACAAGAAAGCTGTCTGTTGGGGGTTACAAGCAAGGTGGTAAACGTTAAGCTAGTATCATAGTCATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CCA 90 bp | AGGGAAGGATTCACAGGCACCTGGTCCAGGACAGTCCCCTTCCACTaGGTAACAGGGCCATTGCCCTCTCTCCATCCATGCTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: REGFTGTWSRTVPFH*VTGPLPSLHPCWIL Trigger: CAGGATCCAGCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCAGTGGAAGGGGACTGTCCTGGACCAGGTGCCTGTGAATCCTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | CATGCAGATCTGAACTGTGAGCCTAAGGGAAGTCCAAGGTGGCAGGCCCAGGAGTTCGAGCCGTCTTCTTaGGCATATTCCACTTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: HADLNCEPKGSPRWQAQEFEPSS*AYSTCL Trigger: CAAGCAAGTGGAATATGCCAAAGAAGACGGCTCGAA...CTCCTGGGCCTGCCACCTTGGACTTCCCTTAGGCTCACAGTTCAGATCTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | AGTCCTTGGGACACTTCAAAAGGAGTTTTACTTTCTAGTCACCATGCCATGTTCGATGTTCCGCCGGGGTaGGGACACAGGCTTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SPWDTSKGVLLSSHHAMFDVPPG*GHRLAW Trigger: CCAAGCAAGCCTGTGTCCCAACCCCGGCGGAACATC...GAACATGGCATGGTGACTAGAAAGTAAAACTCCTTTTGAAGTGTCCCAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | AACAGACACTGCCACAACAGGATCAAGGCAAGAAGCCATACTGGTCTAACATTCTGGGTAACAGGGCCATaGCCCTCTCTCCATCCATGC | + |
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Preference number: 5 (lower is better) Translates to: NRHCHNRIKARSHTGLTFWVTGP*PSLHPC Trigger: GCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCA...GAATGTTAGACCAGTATGGCTTCTTGCCTTGATCCTGTTGTGGCAGTGTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | GAACCAAAGTTAACTGAGGTGGCTTGTAGAAAACCACAATGTAAGTCATCAGATATCAGCTCTGGACCGTaGGCCAGGTGTCTTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: EPKLTEVACRKPQCKSSDISSGP*ARCLPE Trigger: TTCGGGAAGACACCTGGCCAACGGTCCAGAGCTGAT...ATCTGATGACTTACATTGTGGTTTTCTACAAGCCACCTCAGTTAACTTTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | AGGCCTTCTGACCATAACCATGTATCAATAGTAGTAATCAAAATTACAAAGTCCGGGACACAGGCTTGCTaGGTCCCACACTGGTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: RPSDHNHVSIVVIKITKSGTQAC*VPHWSD Trigger: ATCGGACCAGTGTGGGACCAAGCAAGCCTGTGTCCC...GGACTTTGTAATTTTGATTACTACTATTGATACATGGTTATGGTCAGAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS-3UTR CAA 90 bp | GAACCAAAGTTAACTGAGGTGGCTTGTAGAAAACCACAATGTAAGTCATCAGATATGTGCTCCACTGCTTaGCCGATCATTGTGTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: EPKLTEVACRKPQCKSSDMCSTA*PIIVSA Trigger: AGCGGACACAATGATCGGCAAAGCAGTGGAGCACAT...ATCTGATGACTTACATTGTGGTTTTCTACAAGCCACCTCAGTTAACTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS GCA 72 bp | CAGGGCCATTGCCCTCTCTCCATCCATGCTGGATCCTaGAGCCTACGATGTTCCGCCGGGGTTGGGACACAG | + |
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Preference number: 6 (lower is better) Translates to: QGHCPLSIHAGS*SLRCSAGVGTQ Trigger: CTGTGTCCCAACCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCATGGATGGAGAGAGGGCAATGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CCA 72 bp | TGCTGGATCCTGCAGCCTACGATGTTCCGCCGGGGTTaGGACACAGGCTTGCTTGGTCCCACACTGGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CWILQPTMFRRG*DTGLLGPTLVR Trigger: TCGGACCAGTGTGGGACCAAGCAAGCCTGTGTCCCAACCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CAA 72 bp | ATGCTGGATCCTGCAGCCTACGATGTTCCGCCGGGGTaGGGACACAGGCTTGCTTGGTCCCACACTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: MLDPAAYDVPPG*GHRLAWSHTGP Trigger: CGGACCAGTGTGGGACCAAGCAAGCCTGTGTCCCAACCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS GCA 72 bp | CACTGGGTAACAGGGCCATTGCCCTCTCTCCATCCATaGTGGATCCTGCAGCCTACGATGTTCCGCCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: HWVTGPLPSLHP*WILQPTMFRRG Trigger: ACCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CCA 72 bp | TGGGTAACAGGGCCATTGCCCTCTCTCCATCCATGCTaGATCCTGCAGCCTACGATGTTCCGCCGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WVTGPLPSLHPC*ILQPTMFRRGW Trigger: CCAACCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CCA 72 bp | TTCACAGGCACCTGGTCCAGGACAGTCCCCTTCCACTaGGTAACAGGGCCATTGCCCTCTCTCCATCCATGC | + |
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Preference number: 6 (lower is better) Translates to: FTGTWSRTVPFH*VTGPLPSLHPC Trigger: GCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCAGTGGAAGGGGACTGTCCTGGACCAGGTGCCTGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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| CDS CAA 72 bp | TCCAGGACAGTCCCCTTCCACTGGGTAACAGGGCCATaGCCCTCTCTCCATCCATGCTGGATCCTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRTVPFHWVTGP*PSLHPCWILQP Trigger: AGGCTGCAGGATCCAGCATGGATGGAGAGAGGGCAATGGCCCTGTTACCCAGTGGAAGGGGACTGTCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095797.6 |
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