Pregenerated sensors for SPIDR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041974Ensembl transcript IDs: ENSMUST00000040248.9
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCTAAGCCCAAGTAGCTaGAAAATGAAGACACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EILAEALQNNLAENIRYCLSPSS*KMKTQK Trigger: CTTCTGTGTCTTCATTTTGCAGCTACTTGGGCTTAG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACCAAGTAGCTGCAAAATaGAGACACAGAAGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: YEILAEALQNNLAENIRYQVAAK*RHRRHE Trigger: CTCATGTCTTCTGTGTCTTCATTTTGCAGCTACTTG...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGACGTGGGTCCAGCCTGTaGCAGGGGTGGCCAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRRGSSL*QGWPGY Trigger: ATAGCCTGGCCACCCCTGGCACAGGCTGGACCCACG...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGTCTCTCCACTGGGCTaGCCACAGGAAGGCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCVSPLG*PQEGSV Trigger: GACTGAGCCTTCCTGTGGCCAGCCCAGTGGAGAGAC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGCATGTCCCACTGTGTaGCCTTGCTGGCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRACPTV*PCWLLA Trigger: TGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGGTGCCTCCATCTTCTaGCTTCTGTTCCAGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCGASIF*LLFQSP Trigger: GGGAGACTGGAACAGAAGCCAGAAGATGGAGGCACC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCCTCTCTTGAAGAGGTaGCAGGACCAGTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCPLLKR*QDQLGT Trigger: TGTTCCCAACTGGTCCTGTCACCTCTTCAAGAGAGG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTCCAGAGGCATCTaGATGTCCCACTGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYCSRGI*MSHCVP Trigger: GGGCACACAGTGGGACATGCAGATGCCTCTGGAGCA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAACTGTGTGCCCTTGCTaGCTCCTGGCACCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRTVCPC*LLAPSL Trigger: CAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGAGGCTGAGCAGCAGTaGCTCCCTCTGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIREAEQQ*LPLYSA Trigger: TGCTGAGTACAGAGGGAGCCACTGCTGCTCAGCCTC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACCCTGTGTTTGCAGAGTaGTGTCAGTCACCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYPVFAE*CQSPAA Trigger: GGCTGCTGGTGACTGACATCACTCTGCAAACACAGG...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATGCAGGTGCCTCTCTTaGAGAGGTGACAGGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRCRCLS*RGDRTS Trigger: ACTGGTCCTGTCACCTCTTCAAGAGAGGCACCTGCA...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTCCCTTCTAACTGTCTaGTCTTCCAGAGGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCSLLTV*SSRGCC Trigger: ACAGCACCCTCTGGAAGAGCAGACAGTTAGAAGGGA...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGACCCCACAGGAGAAGGTaGCTCCATCTTCTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRPHRRR*LHLLAS Trigger: AGAAGCCAGAAGATGGAGGCACCTTCTCCTGTGGGG...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGGATGCCCCATCAAGTaGTCTGCAGTCTCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRGCPIK*SAVSLV Trigger: CACCAGAGAGACTGCAGACCACTTGATGGGGCATCC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTCTTTGTCTCTCCACTaGGCTGGCCACAGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYSLSLH*AGHRKA Trigger: AGCCTTCCTGTGGCCAGCCCAGTGGAGAGACAAAGA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTTCTTCTACAACCTCTaGGCCCAGCACACACGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYFFYNL*AQHTRG Trigger: CCCTCGTGTGTGCTGGGCCCAGAGGTTGTAGAAGAA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCATCTCAGAGGTGTCCTaGAATCCTTCTCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCISEVS*NPSPHL Trigger: CAAGTGTGGAGAAGGATTTCAGGACACCTCTGAGAT...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACATGCCACAGGCATCCTaGACTAGAAGGCAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYMPQAS*TRRQDH Trigger: ATGGTCCTGCCTTCTAGTGCAGGATGCCTGTGGCAT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCATAGGCCAGCTCTTTaGCTTTCCACAATGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCHRPAL*LSTMSR Trigger: TCTGGACATTGTGGAAAGCCAAAGAGCTGGCCTATG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTTTCCCCGTCTCAACTaGTGTGACCTCTCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYFPRLN*CDLSSR Trigger: TCGAGAAGAGAGGTCACAGCAGTTGAGACGGGGAAA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATCGGCTCTAGGGCCATaGCTACCATCTCTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRSALGP*LPSLCN Trigger: ATTACAGAGAGATGGTAGGCATGGCCCTAGAGCCGA...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTCTTCCAGAGGGTaGTGTTCAAGAACACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYCSSRG*CSRTLP Trigger: GGGAAGTGTTCTTGAACAGCACCCTCTGGAAGAGCA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGACTCTGCACTACTACTTaGACCCTGACTCCAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRLCTTT*TLTPDH Trigger: ATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAG...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAGACAGGCAGGGTTTTaGGAAGAGAGTGGTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYRQAGF*EESGPF Trigger: AAAGGGACCACTCTCTTCCCAAAACCCTGCCTGTCT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTTTGTGAGGGGATTCTaGATCAATGAACAGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCFVRGF*INEQGM Trigger: CATTCCCTGTTCATTGATTCAGAATCCCCTCACAAA...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTCCGCCTGGTATTTGTaGGGGGATTCTGAATCAATG | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYSAWYL*GDSESM Trigger: CATTGATTCAGAATCCCCTCACAAATACCAGGCGGA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATGCTCTCCAATAGCTTaGCCTTCACAGTACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRCSPIA*PSQYSQ Trigger: CTGAGAGTACTGTGAAGGTCAAGCTATTGGAGAGCA...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCAGAGAGAGAGTCAGCTaGTTCCACTGTCTTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCRERVS*FHCLEI Trigger: AATTTCAAGACAGTGGAAGCAGCTGACTCTCTCTCT...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACGGGATTCTGAATCAATaGACAGGGAATGTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYGILNQ*TGNVLG Trigger: ACCCAGAACATTCCCTGTTCATTGATTCAGAATCCC...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAACTGTCAATTAAACTaGAGAGCCCTGGTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYNCQLN*RALVSF Trigger: GAAGGACACCAGGGCTCTTCAGTTTAATTGACAGTT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGATGGGTGTTCTATATaGCAATTCCTTTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCDGCSI*QFLFLL Trigger: CAAGAGGAAAAGGAATTGGCATATAGAACACCCATC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACCTGCAACTTGCATGCTaGATTCCTCATGCAGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYLQLAC*IPHAVL Trigger: TAGAACTGCATGAGGAATGCAGCATGCAAGTTGCAG...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTCACATACTGCAACTTaGATGCTGCATTCCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYSHTAT*MLHSSC Trigger: GCATGAGGAATGCAGCATGCAAGTTGCAGTATGTGA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGCAACTATAAGATGTTaGTCTGCCTTCTCATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRATIRC*SAFSCP Trigger: CGGACATGAGAAGGCAGAGCAACATCTTATAGTTGC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCAGCCAGATTTCCTTTTaGGCCAAAAGATTCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCSQISF*AKRFFS Trigger: GCTAAAGAATCTTTTGGCGCAAAAGGAAATCTGGCT...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGAACAGGGAATGTTCTaGGTCTTCTTCTTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCEQGMF*VFFFFT Trigger: AGTGAAAAAGAAGAAGACCCAGAACATTCCCTGTTC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGTCTCCACAAAGAAATaGCAGATCTCTTTCGATTCT | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCVSTKK*QISFDS Trigger: AGAATCGAAAGAGATCTGCCATTTCTTTGTGGAGAC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAGTCAGAGATATCACTaGGGGCCACAAACTGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYSQRYH*GPQTVN Trigger: ATTGACAGTTTGTGGCCCCCAGTGATATCTCTGACT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCTGCACTCATTAGTCTaGAGGATTTCTTTTAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCLHSLV*RISFKQ Trigger: CTGCTTAAAAGAAATCCTCCAGACTAATGAGTGCAG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGTTTTGGGAAGAGAGTaGTCCCTTTCATCCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRVLGRE*SLSSCV Trigger: AACACAGGATGAAAGGGACCACTCTCTTCCCAAAAC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCAATTTGTCCCAGTGTTaGATGTGCAGAGAAGATATA | + |
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Preference number: 4 (lower is better) Translates to: EILAEALQNNLAENIRYCNLSQC*MCREDI Trigger: TATATCTTCTCTGCACATCCAACACTGGGACAAATT...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATGTGTAGTGATGGACTaGACAAAGCAGAGTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRCVVMD*TKQSKG Trigger: ACCTTTACTCTGCTTTGTCCAGTCCATCACTACACA...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR TCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACCTTCTTCTTTGTTACTaGATATTCTGGAGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYLLLCY*IFWSLR Trigger: CCGAAGACTCCAGAATATTCAGTAACAAAGAAGAAG...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACGATCTCTTTCGATTCTaGAGTTCTTGGAGTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYDLFRF*SSWSLS Trigger: AGAAAGACTCCAAGAACTGCAGAATCGAAAGAGATC...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTCCCAGTGTTGGATGTaGAGAGAAGATATAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYSQCWM*REDITE Trigger: TTCTGTTATATCTTCTCTGCACATCCAACACTGGGA...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGACTCTTCTCGAAAGGATaGGTGTTCTATATGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRLFSKG*VFYMPI Trigger: AATTGGCATATAGAACACCCATCCTTTCGAGAAGAG...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR TCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAAGTTATATTTCTCCTTaGAAGAGATATGTCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRSYISP*KRYVRT Trigger: AGTCCGGACATATCTCTTTCAAGGAGAAATATAACT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR TCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAAGTCTGATTGATGGATaGATTGTCTGTTATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRSLIDG*IVCYVL Trigger: AAGGACATAACAGACAATTCATCCATCAATCAGACT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAACCAAACACCATCTTaGATCAGATTTAAAATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYNQTPS*IRFKIR Trigger: GCGGATTTTAAATCTGATGCAAGATGGTGTTTGGTT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAATACACCAGATTTTCTaGCTAATGGTGTCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRIHQIF*LMVSFG Trigger: ACCAAATGACACCATTAGGCAGAAAATCTGGTGTAT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR GCA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACATGCTGCATTCCTCATaGAGTTCTAGAATTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YEILAEALQNNLAENIRYMLHSS*SSRIFT Trigger: TGTGAAAATTCTAGAACTGCATGAGGAATGCAGCAT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAGCGCACTGTTTCTTTTaGAATAGCTTTCTGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRAHCFF*NSFLTK Trigger: TTTTGTCAGAAAGCTATTGCAAAAGAAACAGTGCGC...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR GCA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAAATGTGGTCTTCAATTaGATCAATTTGTCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QYEILAEALQNNLAENIRNVVFN*INLSQC Trigger: ACACTGGGACAAATTGATGCAATTGAAGACCACATT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | GACCATGCTCCAGAGGCATCTGCATGTCCCACTGTGTGCCCTTGCTaGCTCCTGGCACCATCTCTGCTGAGAAGAGAGTACACCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DHAPEASACPTVCPC*LLAPSLLRREYTLC Trigger: GCAGAGGGTGTACTCTCTTCTCAGCAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGCAGATGCCTCTGGAGCATGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | CGTGGGACAGTCCAGAAAGACATGCAGGTGCCTCTCTTGAAGAGGTaGCAGGACCAGTTGGGAACAGTCCCCACAGGAGAAGGTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGTVQKDMQVPLLKR*QDQLGTVPTGEGAS Trigger: GGAGGCACCTTCTCCTGTGGGGACTGTTCCCAACTGGTCCTGTCACCTCTTCAAGAGAGGCACCTGCATGTCTTTCTGGACTGTCCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | AGAAGGCAGGACCATGCTCCAGAGGCATCTGCATGTCCCACTGTGTaGCCTTGCTGGCTCCTGGCACCATCTCTGCTGAGAAGAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRQDHAPEASACPTV*PCWLLAPSLLRREY Trigger: GTACTCTCTTCTCAGCAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGCAGATGCCTCTGGAGCATGGTCCTGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | AGGGTGCTGTTCAAGAACACTTCCCCGAACATGCCACAGGCATCCTaGACTAGAAGGCAGGACCATGCTCCAGAGGCATCTGCATGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVLFKNTSPNMPQAS*TRRQDHAPEASACP Trigger: GGGACATGCAGATGCCTCTGGAGCATGGTCCTGCCTTCTAGTGCAGGATGCCTGTGGCATGTTCGGGGAAGTGTTCTTGAACAGCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | TCAGGTCTCGTGGGACAGTCCAGAAAGACATGCAGGTGCCTCTCTTaGAGAGGTGACAGGACCAGTTGGGAACAGTCCCCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLVGQSRKTCRCLS*RGDRTSWEQSPQEK Trigger: CTTCTCCTGTGGGGACTGTTCCCAACTGGTCCTGTCACCTCTTCAAGAGAGGCACCTGCATGTCTTTCTGGACTGTCCCACGAGACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | CTCAACTGCTGTGACCTCTCTTCTCGAAAGGATGGGTGTTCTATATaGCAATTCCTTTTCCTCTTGGACGTGCCGGGGCGGCGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNCCDLSSRKDGCSI*QFLFLLDVPGRRAP Trigger: TGGAGCCCGCCGCCCCGGCACGTCCAAGAGGAAAAGGAATTGGCATATAGAACACCCATCCTTTCGAGAAGAGAGGTCACAGCAGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | GGAGCTAGTCCTCCGGGAGGGCTGGTGATTGGAGGCCCTGCTAACTaGTCACATACTGCAACTTGCATGCTGCATTCCTCATGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GASPPGGLVIGGPAN*SHTATCMLHSSCSS Trigger: AGAACTGCATGAGGAATGCAGCATGCAAGTTGCAGTATGTGAGCAGTTAGCAGGGCCTCCAATCACCAGCCCTCCCGGAGGACTAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | TGCTGGCTCCTGGCACCATCTCTGCTGAGAAGAGAGTACACCCTCTaGACTACTACTTGGACCCTGACTCCAGACCATAGGCCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CWLLAPSLLRREYTL*TTTWTLTPDHRPAL Trigger: AAGAGCTGGCCTATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAGGGTGTACTCTCTTCTCAGCAGAGATGGTGCCAGGAGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | AGGGGAGCAGCAACTATAAGATGTTGCTCTGCCTTCTCATGTCCGTaGGTCCAGCCTGTGCCAGGGGTGGCCAGGCTATCATATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGAATIRCCSAFSCP*VQPVPGVARLSYVV Trigger: GACTACATATGATAGCCTGGCCACCCCTGGCACAGGCTGGACCCACGGACATGAGAAGGCAGAGCAACATCTTATAGTTGCTGCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | ATGTCCAGAAGAGAATTCCTCAGGGGAGCAGCAACTATAAGATGTTaGTCTGCCTTCTCATGTCCGTGGGTCCAGCCTGTGCCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSRREFLRGAATIRC*SAFSCPWVQPVPGV Trigger: CACCCCTGGCACAGGCTGGACCCACGGACATGAGAAGGCAGAGCAACATCTTATAGTTGCTGCTCCCCTGAGGAATTCTCTTCTGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | GTCTCCCATTGCCACACCGGTCACACACAGGCCACGAGAAAGCAGTaGTCTCATCTACATCAACCACAGTACCTTGCACACTGCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSHCHTGHTQATRKQ*SHLHQPQYLAHCKW Trigger: CCATTTGCAGTGTGCAAGGTACTGTGGTTGATGTAGATGAGAGCACTGCTTTCTCGTGGCCTGTGTGTGACCGGTGTGGCAATGGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | GCACCATCTCTGCTGAGAAGAGAGTACACCCTCTGCACTACTACTTaGACCCTGACTCCAGACCATAGGCCAGCTCTTTGGCTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: APSLLRREYTLCTTT*TLTPDHRPALWLST Trigger: TGTGGAAAGCCAAAGAGCTGGCCTATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAGGGTGTACTCTCTTCTCAGCAGAGATGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | AATGGAGTTGACAGGTGTGAGGGCACTCAGTTCATCCAGTGTCACTaGGCTGGGCAAGTCACAGGAAGCAGAAGGTACACACAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGVDRCEGTQFIQCH*AGQVTGSRRYTQER Trigger: CCTCTCTTGTGTGTACCTTCTGCTTCCTGTGACTTGCCCAGCCCAGTGACACTGGATGAACTGAGTGCCCTCACACCTGTCAACTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | TGCACTACTACTTGGACCCTGACTCCAGACCATAGGCCAGCTCTTTaGCTTTCCACAATGTCCAGAAGAGAATTCCTCAGGGGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTTTWTLTPDHRPAL*LSTMSRREFLRGAA Trigger: TGCTGCTCCCCTGAGGAATTCTCTTCTGGACATTGTGGAAAGCCAAAGAGCTGGCCTATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | GGACATGAGATAGTCCTGTCACCAAGCCTGTCGGCTCTAGGGCCATaGCTACCATCTCTCTGTAATGCAGGAAGTGTCTTATCTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GHEIVLSPSLSALGP*LPSLCNAGSVLSSS Trigger: CGATGAAGATAAGACACTTCCTGCATTACAGAGAGATGGTAGGCATGGCCCTAGAGCCGACAGGCTTGGTGACAGGACTATCTCATGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCAATTCCTTTTCCTCTaGGACGTGCCGGGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCQFLFL*DVPGRR Trigger: CCGCCGCCCCGGCACGTCCAAGAGGAAAAGGAATTG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTCCCACTGTGTGCCCTaGCTGGCTCCTGGCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCSHCVP*LAPGTI Trigger: GATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGA...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | GTCAGCTGCTTCCACTGTCTTGAAATTTCCCCGTCTCAACTGCTGTaGCCTCTCTTCTCGAAAGGATGGGTGTTCTATATGCCAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSCFHCLEISPSQLL*PLFSKGWVFYMPIP Trigger: AGGAATTGGCATATAGAACACCCATCCTTTCGAGAAGAGAGGTCACAGCAGTTGAGACGGGGAAATTTCAAGACAGTGGAAGCAGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | AGAGAGTCAGCTGCTTCCACTGTCTTGAAATTTCCCCGTCTCAACTaGTGTGACCTCTCTTCTCGAAAGGATGGGTGTTCTATATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RESAASTVLKFPRLN*CDLSSRKDGCSICQ Trigger: TTGGCATATAGAACACCCATCCTTTCGAGAAGAGAGGTCACAGCAGTTGAGACGGGGAAATTTCAAGACAGTGGAAGCAGCTGACTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | CAGGATCTCAGAGGTGTCCTGAAATCCTTCTCCACACTTGAGCCATaGTTTAGAGAGAGAGTCAGCTGCTTCCACTGTCTTGAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDLRGVLKSFSTLEP*FRERVSCFHCLEIS Trigger: GGAAATTTCAAGACAGTGGAAGCAGCTGACTCTCTCTCTAAAGCATGGCTCAAGTGTGGAGAAGGATTTCAGGACACCTCTGAGATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | ACACATCGATGTCTCCACAAAGAAATGGCAGATCTCTTTCGATTCTaGAGTTCTTGGAGTCTTTCTGCTAGCCCGCCCCTTAAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THRCLHKEMADLFRF*SSWSLSASPPLKSF Trigger: GAAGCTTTTAAGGGGCGGGCTAGCAGAAAGACTCCAAGAACTGCAGAATCGAAAGAGATCTGCCATTTCTTTGTGGAGACATCGATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | TGGGGTGTCAATGTAGGCTCAGCTGAATTTGCTTCTGAGTCAGTCTaGCTAACCAAACACCATCTTGCATCAGATTTAAAATCCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGVNVGSAEFASESV*LTKHHLASDLKSAW Trigger: CCAGGCGGATTTTAAATCTGATGCAAGATGGTGTTTGGTTAGTCAGACTGACTCAGAAGCAAATTCAGCTGAGCCTACATTGACACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | TGGGTCCAGCCTGTGCCAGGGGTGGCCAGGCTATCATATGTAGTCTaGTTGATGGATGAATTGTCTGTTATGTCCTTAATTCTAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: WVQPVPGVARLSYVV*LMDELSVMSLILNV Trigger: GACATTTAGAATTAAGGACATAACAGACAATTCATCCATCAATCAGACTACATATGATAGCCTGGCCACCCCTGGCACAGGCTGGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCCCTCTGCACTACTACTaGGACCCTGACTCCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCPLHYY*DPDSRP Trigger: TGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAGG...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCGAGGCAGATAAGTCTTaGTCTCTCCACTGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCEADKS*SLHWAG Trigger: GCCAGCCCAGTGGAGAGACAAAGACTTATCTGCCTC...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | GCGGACAACTGGAGGCTGGTAAAGCTTGGAAATGTGGTCTTCAATTaGATCAATTTGTCCCAGTGTTGGATGTGCAGAGAAGATATAACA | + |
|
Preference number: 5 (lower is better) Translates to: ADNWRLVKLGNVVFN*INLSQCWMCREDIT Trigger: TGTTATATCTTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTTTACCAGCCTCCAGTTGTCCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS TCA 90 bp | TGTGCCAGGGGTGGCCAGGCTATCATATGTAGTCTGATTGATGGATaGATTGTCTGTTATGTCCTTAATTCTAAATGTCTGGGCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CARGGQAIICSLIDG*IVCYVLNSKCLGQS Trigger: ACTTTGGCCCAGACATTTAGAATTAAGGACATAACAGACAATTCATCCATCAATCAGACTACATATGATAGCCTGGCCACCCCTGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS GCA 90 bp | CCTGCTAACTGCTCACATACTGCAACTTGCATGCTGCATTCCTCATaGAGTTCTAGAATTTTCACAGTTAATACACCAGATTTTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PANCSHTATCMLHSS*SSRIFTVNTPDFLP Trigger: AGGCAGAAAATCTGGTGTATTAACTGTGAAAATTCTAGAACTGCATGAGGAATGCAGCATGCAAGTTGCAGTATGTGAGCAGTTAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | ATGGTGTCATTTGGTAAGAAACACATCGATGTCTCCACAAAGAAATaGCAGATCTCTTTCGATTCTGCAGTTCTTGGAGTCTTTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: MVSFGKKHIDVSTKK*QISFDSAVLGVFLL Trigger: TAGCAGAAAGACTCCAAGAACTGCAGAATCGAAAGAGATCTGCCATTTCTTTGTGGAGACATCGATGTGTTTCTTACCAAATGACACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS CCA 90 bp | AAGCTTGGAAATGTGGTCTTCAATTGCATCAATTTGTCCCAGTGTTaGATGTGCAGAGAAGATATAACAGAAGATAGGAGGAGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: KLGNVVFNCINLSQC*MCREDITEDRRRQI Trigger: TATCTGCCTCCTCCTATCTTCTGTTATATCTTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACGCTGCTTCCACTGTCTaGAAATTTCCCCGTCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYAASTV*KFPRLN Trigger: GTTGAGACGGGGAAATTTCAAGACAGTGGAAGCAGC...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTGGGATAAGAAGTTTTaGCCAAGGAGGGAAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCWDKKF*PRREDV Trigger: TACATCTTCCCTCCTTGGCAAAAACTTCTTATCCCA...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACCCTTTCATCCTGTGTTaGCAGAGTGATGTCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYPFILC*QSDVSH Trigger: GTGACTGACATCACTCTGCAAACACAGGATGAAAGG...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAATCCTTCTCCACACTaGAGCCATGCTTTAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYNPSPH*SHALER Trigger: TCTCTCTAAAGCATGGCTCAAGTGTGGAGAAGGATT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACTGCTTTCTGTCTTTGGTTTaGGAGATAATTCCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EILAEALQNNLAENIRYCFLSLV*EIIPGA Trigger: AGCACCTGGAATTATCTCCAAAACCAAAGACAGAAA...GCAGTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACATAGCCTGTCATCACTaGTCAGACTTGCACAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYIACHH*SDLHRN Trigger: ATTCCTGTGCAAGTCTGACAAGTGATGACAGGCTAT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
||
| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACAGCAACTATAAGATGTaGCTCTGCCTTCTCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYSNYKM*LCLLMS Trigger: GGACATGAGAAGGCAGAGCAACATCTTATAGTTGCT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CAA 90 bp | TATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATACATCAACCACAGTACCTaGCACACTGCAAATGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: YEILAEALQNNLAENIRYINHST*HTANGV Trigger: AACTCCATTTGCAGTGTGCAAGGTACTGTGGTTGAT...GTATCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CAA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGACAATTTGTCCCAGTGTaGGATGTGCAGAGAAGATAT | + |
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Preference number: 5 (lower is better) Translates to: QYEILAEALQNNLAENIRQFVPV*DVQRRY Trigger: ATATCTTCTCTGCACATCCAACACTGGGACAAATTG...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CAA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGATTCAATTGCATCAATTaGTCCCAGTGTTGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: QYEILAEALQNNLAENIRFNCIN*SQCWMC Trigger: GCACATCCAACACTGGGACAAATTGATGCAATTGAA...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CAA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAAAATGTGGTCTTCAATaGCATCAATTTGTCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QYEILAEALQNNLAENIRKCGLQ*HQFVPV Trigger: CACTGGGACAAATTGATGCAATTGAAGACCACATTT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 90 bp | ATCTTCATCGGAGAAATCACTTTCACTGGAACTCCATATTATATTTaGAAGCTCACTAGCATTCTTACTTGTAGTTTCTGTCTTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: IFIGEITFTGTPYYI*KLTSILTCSFCLWF Trigger: AAACCAAAGACAGAAACTACAAGTAAGAATGCTAGTGAGCTTCCAAATATAATATGGAGTTCCAGTGAAAGTGATTTCTCCGATGAAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS-3UTR CAA 90 bp | CAATATGAGATACTGGCTGAAGCTTTACAGAACAATCTAGCAGAGAATATTAGAAAGTTATATTTCTCCTaGAAAGAGATATGTCCGGAC | + |
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Preference number: 5 (lower is better) Translates to: QYEILAEALQNNLAENIRKLYFS*KEICPD Trigger: GTCCGGACATATCTCTTTCAAGGAGAAATATAACTT...TCTAATATTCTCTGCTAGATTGTTCTGTAAAGCTTCAGCCAGTATCTCATATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | GCTCCAGAGGCATCTGCATGTCCCACTGTGTGCCCTTaGTGGCTCCTGGCACCATCTCTGCTGAGAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: APEASACPTVCP*WLLAPSLLRRE Trigger: CTCTCTTCTCAGCAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGCAGATGCCTCTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | GACCATGCTCCAGAGGCATCTGCATGTCCCACTGTGTaGCCTTGCTGGCTCCTGGCACCATCTCTGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: DHAPEASACPTV*PCWLLAPSLLR Trigger: TCTCAGCAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGCAGATGCCTCTGGAGCATGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | GGAACAGTCCCCACAGGAGAAGGTGCCTCCATCTTCTaGCTTCTGTTCCAGTCTCCCATTGCCACACCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GTVPTGEGASIF*LLFQSPIATPV Trigger: GACCGGTGTGGCAATGGGAGACTGGAACAGAAGCCAGAAGATGGAGGCACCTTCTCCTGTGGGGACTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | TGCTCCAGAGGCATCTGCATGTCCCACTGTGTGCCCTaGCTGGCTCCTGGCACCATCTCTGCTGAGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: CSRGICMSHCVP*LAPGTISAEKR Trigger: TCTCTTCTCAGCAGAGATGGTGCCAGGAGCCAGCAAGGGCACACAGTGGGACATGCAGATGCCTCTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | CCTCCGGGAGGGCTGGTGATTGGAGGCCCTGCTAACTaGTCACATACTGCAACTTGCATGCTGCATTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPGGLVIGGPAN*SHTATCMLHSS Trigger: TGAGGAATGCAGCATGCAAGTTGCAGTATGTGAGCAGTTAGCAGGGCCTCCAATCACCAGCCCTCCCGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | GCAACTATAAGATGTTGCTCTGCCTTCTCATGTCCGTaGGTCCAGCCTGTGCCAGGGGTGGCCAGGCTATCA | + |
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Preference number: 6 (lower is better) Translates to: ATIRCCSAFSCP*VQPVPGVARLS Trigger: TGATAGCCTGGCCACCCCTGGCACAGGCTGGACCCACGGACATGAGAAGGCAGAGCAACATCTTATAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | CTGGCACCATCTCTGCTGAGAAGAGAGTACACCCTCTaGACTACTACTTGGACCCTGACTCCAGACCATAGG | + |
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Preference number: 6 (lower is better) Translates to: LAPSLLRREYTL*TTTWTLTPDHR Trigger: CCTATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAGGGTGTACTCTCTTCTCAGCAGAGATGGTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | TGCCACACCGGTCACACACAGGCCACGAGAAAGCAGTaGTCTCATCTACATCAACCACAGTACCTTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: CHTGHTQATRKQ*SHLHQPQYLAH Trigger: GTGTGCAAGGTACTGTGGTTGATGTAGATGAGAGCACTGCTTTCTCGTGGCCTGTGTGTGACCGGTGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | CTGCTGAGAAGAGAGTACACCCTCTGCACTACTACTTaGACCCTGACTCCAGACCATAGGCCAGCTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLRREYTLCTTT*TLTPDHRPALW Trigger: CCAAAGAGCTGGCCTATGGTCTGGAGTCAGGGTCCAAGTAGTAGTGCAGAGGGTGTACTCTCTTCTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | TGTGACCTCTCTTCTCGAAAGGATGGGTGTTCTATATaGCAATTCCTTTTCCTCTTGGACGTGCCGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CDLSSRKDGCSI*QFLFLLDVPGR Trigger: CCGCCCCGGCACGTCCAAGAGGAAAAGGAATTGGCATATAGAACACCCATCCTTTCGAGAAGAGAGGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | GTAAATGATGTCCTGGGGATGCCCCATCAAGTGGTCTaGAGTCTCTCTGGTGAAGAGTACCTTCAGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VNDVLGMPHQVV*SLSGEEYLQVG Trigger: GCCTACCTGAAGGTACTCTTCACCAGAGAGACTGCAGACCACTTGATGGGGCATCCCCAGGACATCATTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | AGAGAATTCCTCAGGGGAGCAGCAACTATAAGATGTTaGTCTGCCTTCTCATGTCCGTGGGTCCAGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: REFLRGAATIRC*SAFSCPWVQPV Trigger: CACAGGCTGGACCCACGGACATGAGAAGGCAGAGCAACATCTTATAGTTGCTGCTCCCCTGAGGAATTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | ATAAGACACCAGCAAGGCAAGTTCTTCTACAACCTCTaGGCCCAGCACACACGAGGGGGCTATATAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRHQQGKFFYNL*AQHTRGGYIDR Trigger: CCTGTCTATATAGCCCCCTCGTGTGTGCTGGGCCCAGAGGTTGTAGAAGAACTTGCCTTGCTGGTGTCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 90 bp | GACAGGCAGGGTTTTGGGAAGAGAGTGGTCCCTTTCATCCTGTGTTaGCAGAGTGATGTCAGTCACCAGCAGCCAGATTTCCTTTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DRQGFGKRVVPFILC*QSDVSHQQPDFLLR Trigger: GCGCAAAAGGAAATCTGGCTGCTGGTGACTGACATCACTCTGCAAACACAGGATGAAAGGGACCACTCTCTTCCCAAAACCCTGCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | ATAGTCCTGTCACCAAGCCTGTCGGCTCTAGGGCCATaGCTACCATCTCTCTGTAATGCAGGAAGTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: IVLSPSLSALGP*LPSLCNAGSVL Trigger: TAAGACACTTCCTGCATTACAGAGAGATGGTAGGCATGGCCCTAGAGCCGACAGGCTTGGTGACAGGACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | ACTTGGACCCTGACTCCAGACCATAGGCCAGCTCTTTaGCTTTCCACAATGTCCAGAAGAGAATTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWTLTPDHRPAL*LSTMSRREFLR Trigger: CCTGAGGAATTCTCTTCTGGACATTGTGGAAAGCCAAAGAGCTGGCCTATGGTCTGGAGTCAGGGTCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | GAAGAGAGTGGTCCCTTTCATCCTGTGTTTGCAGAGTaGTGTCAGTCACCAGCAGCCAGATTTCCTTTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EESGPFHPVFAE*CQSPAARFPFA Trigger: CGCAAAAGGAAATCTGGCTGCTGGTGACTGACATCACTCTGCAAACACAGGATGAAAGGGACCACTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | GCTGCTTCCACTGTCTTGAAATTTCCCCGTCTCAACTaGTGTGACCTCTCTTCTCGAAAGGATGGGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AASTVLKFPRLN*CDLSSRKDGCS Trigger: AGAACACCCATCCTTTCGAGAAGAGAGGTCACAGCAGTTGAGACGGGGAAATTTCAAGACAGTGGAAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | ACATCAACCACAGTACCTTGCACACTGCAAATGGAGTaGACAGGTGTGAGGGCACTCAGTTCATCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TSTTVPCTLQME*TGVRALSSSSV Trigger: GACACTGGATGAACTGAGTGCCCTCACACCTGTCAACTCCATTTGCAGTGTGCAAGGTACTGTGGTTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | AGAGGTGTCCTGAAATCCTTCTCCACACTTGAGCCATaGTTTAGAGAGAGAGTCAGCTGCTTCCACTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGVLKSFSTLEP*FRERVSCFHCL Trigger: AAGACAGTGGAAGCAGCTGACTCTCTCTCTAAAGCATGGCTCAAGTGTGGAGAAGGATTTCAGGACACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | TGTCTCCACAAAGAAATGGCAGATCTCTTTCGATTCTaGAGTTCTTGGAGTCTTTCTGCTAGCCCGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CLHKEMADLFRF*SSWSLSASPPL Trigger: AAGGGGCGGGCTAGCAGAAAGACTCCAAGAACTGCAGAATCGAAAGAGATCTGCCATTTCTTTGTGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | CATGCTTTAGAGAGAGAGTCAGCTGCTTCCACTGTCTaGAAATTTCCCCGTCTCAACTGCTGTGACCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HALERESAASTV*KFPRLNCCDLS Trigger: AGAGAGGTCACAGCAGTTGAGACGGGGAAATTTCAAGACAGTGGAAGCAGCTGACTCTCTCTCTAAAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | CAGAAGGCTCACATAGCCTGTCATCACTTGTCAGACTaGCACAGGAATCACAATCTGAGATGTCCAGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: QKAHIACHHLSD*HRNHNLRCPGY Trigger: GTACCCTGGACATCTCAGATTGTGATTCCTGTGCAAGTCTGACAAGTGATGACAGGCTATGTGAGCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 90 bp | AAATTGGCTCAGAAGGCTCACATAGCCTGTCATCACTTGTCAGACTaGCACAGGAATCACAATCTGAGATGTCCAGGGTACCCTTATCAT | + |
|
Preference number: 6 (lower is better) Translates to: KLAQKAHIACHHLSD*HRNHNLRCPGYPYH Trigger: ATGATAAGGGTACCCTGGACATCTCAGATTGTGATTCCTGTGCAAGTCTGACAAGTGATGACAGGCTATGTGAGCCTTCTGAGCCAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | TTCCACTGTCTTGAAATTTCCCCGTCTCAACTGCTGTaGCCTCTCTTCTCGAAAGGATGGGTGTTCTATATG | + |
|
Preference number: 6 (lower is better) Translates to: FHCLEISPSQLL*PLFSKGWVFYM Trigger: CATATAGAACACCCATCCTTTCGAGAAGAGAGGTCACAGCAGTTGAGACGGGGAAATTTCAAGACAGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 90 bp | AGCGGACAACTGGAGGCTGGTAAAGCTTGGAAATGTGGTCTTCAATaGCATCAATTTGTCCCAGTGTTGGATGTGCAGAGAAGATATAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGQLEAGKAWKCGLQ*HQFVPVLDVQRRYN Trigger: GTTATATCTTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTTTACCAGCCTCCAGTTGTCCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | TTTTCACTTGCTAATGACAGGATCTCAGAGGTGTCCTaGAATCCTTCTCCACACTTGAGCCATGCTTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLANDRISEVS*NPSPHLSHALE Trigger: CTCTAAAGCATGGCTCAAGTGTGGAGAAGGATTTCAGGACACCTCTGAGATCCTGTCATTAGCAAGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | CCTGTGCCAGGGGTGGCCAGGCTATCATATGTAGTCTaGTTGATGGATGAATTGTCTGTTATGTCCTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: PVPGVARLSYVV*LMDELSVMSLI Trigger: AATTAAGGACATAACAGACAATTCATCCATCAATCAGACTACATATGATAGCCTGGCCACCCCTGGCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | TGGAGGCTGGTAAAGCTTGGAAATGTGGTCTTCAATTaGATCAATTTGTCCCAGTGTTGGATGTGCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: WRLVKLGNVVFN*INLSQCWMCRE Trigger: TTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTTTACCAGCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | AAATTGGCTCAGAAGGCTCACATAGCCTGTCATCACTaGTCAGACTTGCACAGGAATCACAATCTGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: KLAQKAHIACHH*SDLHRNHNLRC Trigger: ACATCTCAGATTGTGATTCCTGTGCAAGTCTGACAAGTGATGACAGGCTATGTGAGCCTTCTGAGCCAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | TATTCTGGAGTCTTCGGAAACTTGACCGTATATTTCTaGGGTGTCAATGTAGGCTCAGCTGAATTTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YSGVFGNLTVYF*GVNVGSAEFAS Trigger: AGAAGCAAATTCAGCTGAGCCTACATTGACACCCCAGAAATATACGGTCAAGTTTCCGAAGACTCCAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 90 bp | TGGAGGCTGGTAAAGCTTGGAAATGTGGTCTTCAATTGCATCAATTaGTCCCAGTGTTGGATGTGCAGAGAAGATATAACAGAAGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: WRLVKLGNVVFNCIN*SQCWMCREDITEDR Trigger: CCTATCTTCTGTTATATCTTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTTTACCAGCCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | AATAATGGAGCAACTTCCATTTGGGATAAGAAGTTTTaGCCAAGGAGGGAAGATGTAAATGATGTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NNGATSIWDKKF*PRREDVNDVLG Trigger: CCCCAGGACATCATTTACATCTTCCCTCCTTGGCAAAAACTTCTTATCCCAAATGGAAGTTGCTCCATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS GCA 72 bp | TGCTCACATACTGCAACTTGCATGCTGCATTCCTCATaGAGTTCTAGAATTTTCACAGTTAATACACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CSHTATCMLHSS*SSRIFTVNTPD Trigger: ATCTGGTGTATTAACTGTGAAAATTCTAGAACTGCATGAGGAATGCAGCATGCAAGTTGCAGTATGTGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | TTCTTTGTTACTGAATATTCTGGAGTCTTCGGAAACTaGACCGTATATTTCTGGGGTGTCAATGTAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFVTEYSGVFGN*TVYFWGVNVGS Trigger: TGAGCCTACATTGACACCCCAGAAATATACGGTCAAGTTTCCGAAGACTCCAGAATATTCAGTAACAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 90 bp | AAAAGCTTCTTCTTTGTTACTGAATATTCTGGAGTCTTCGGAAACTaGACCGTATATTTCTGGGGTGTCAATGTAGGCTCAGCTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: KSFFFVTEYSGVFGN*TVYFWGVNVGSAEF Trigger: AAATTCAGCTGAGCCTACATTGACACCCCAGAAATATACGGTCAAGTTTCCGAAGACTCCAGAATATTCAGTAACAAAGAAGAAGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | AATGTAGGCTCAGCTGAATTTGCTTCTGAGTCAGTCTaGCTAACCAAACACCATCTTGCATCAGATTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: NVGSAEFASESV*LTKHHLASDLK Trigger: TTTTAAATCTGATGCAAGATGGTGTTTGGTTAGTCAGACTGACTCAGAAGCAAATTCAGCTGAGCCTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS TCA 72 bp | GGTGGCCAGGCTATCATATGTAGTCTGATTGATGGATaGATTGTCTGTTATGTCCTTAATTCTAAATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGQAIICSLIDG*IVCYVLNSKCL Trigger: CAGACATTTAGAATTAAGGACATAACAGACAATTCATCCATCAATCAGACTACATATGATAGCCTGGCCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CAA 72 bp | GTAAAGCTTGGAAATGTGGTCTTCAATTGCATCAATTaGTCCCAGTGTTGGATGTGCAGAGAAGATATAACA | + |
|
Preference number: 6 (lower is better) Translates to: VKLGNVVFNCIN*SQCWMCREDIT Trigger: TGTTATATCTTCTCTGCACATCCAACACTGGGACAAATTGATGCAATTGAAGACCACATTTCCAAGCTTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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| CDS CCA 72 bp | GGAGAAATCACTTTCACTGGAACTCCATATTATATTTaGAAGCTCACTAGCATTCTTACTTGTAGTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GEITFTGTPYYI*KLTSILTCSFC Trigger: ACAGAAACTACAAGTAAGAATGCTAGTGAGCTTCCAAATATAATATGGAGTTCCAGTGAAAGTGATTTCTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040248.9 |
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