Pregenerated sensors for SPICE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043065Ensembl transcript IDs: ENSMUST00000050897.7
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGGCCCAACCCCCAGGATAGCTGTAGCCATTTTGTTCCATGCCTaGCAACAACTTCATATCGTTGCTATAATATGCTTGCCAGTTACT | + |
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Preference number: 1 (lower is better) Translates to: AGPTPRIAVAILFHA*QQLHIVAIICLPVT Trigger: AGTAACTGGCAAGCATATTATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTATCCTGGGGGTTGGGCCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR CCA 90 bp | GGTCAGTATGAACTGTTAGATCTGAAATGGCTTGAGTCAGCCTACTaGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: GQYELLDLKWLESAY*AALSAPAYELTVVF Trigger: AAAAACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTCAAGCCATTTCAGATCTAACAGTTCATACTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 90 bp | CTTAAAGAAAATAGACATTCCTCCACCCACTTCCCGTTCTTTTGTTaGGACAGGGTTCTCTACGGAGCTCAGACTGGTGTGGAACTCATT | + |
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Preference number: 1 (lower is better) Translates to: LKENRHSSTHFPFFC*DRVLYGAQTGVELI Trigger: AATGAGTTCCACACCAGTCTGAGCTCCGTAGAGAACCCTGTCTCAACAAAAGAACGGGAAGTGGGTGGAGGAATGTCTATTTTCTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 90 bp | CTGCCAACAACTTCATATCGTTGCTATAATATGCTTGCCAGTTACTaGCACAGAAAAATAATTGACTCAGAGCAGGTTCATGCTGACCAC | + |
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Preference number: 1 (lower is better) Translates to: LPTTSYRCYNMLASY*HRKIIDSEQVHADH Trigger: GTGGTCAGCATGAACCTGCTCTGAGTCAATTATTTTTCTGTGTCAGTAACTGGCAAGCATATTATAGCAACGATATGAAGTTGTTGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTTCCCGTTCTTTTGTTaGGACAGGGTTCTCTACGGA | + |
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Preference number: 2 (lower is better) Translates to: RHLNKMVITIVEAGPTPRFPFFC*DRVLYG Trigger: TCCGTAGAGAACCCTGTCTCAACAAAAGAACGGGAA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGTTGAAATGGAATCTGTaGAGTGCGAAGGAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGLKWNL*SAKERP Trigger: TGGCCTTTCCTTCGCACTTCACAGATTCCATTTCAA...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR-3UTR GCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAATGGAATCTGTGAAGTaGGAAGGAAAGGCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: IAVAILFHACQQLHIVAIMESVK*EGKARN Trigger: ATTCCTGGCCTTTCCTTCGCACTTCACAGATTCCAT...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTGTTCTTGTGGGAAGGTaGTTGCATTTAAGATGCACT | + |
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Preference number: 2 (lower is better) Translates to: AHCGFYSFSLNKLTEKDAVLVGR*LHLRCT Trigger: AGTGCATCTTAAATGCAATCACCTTCCCACAAGAAC...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR CCA 72 bp | GTTGAGACAGGGTTCTCTACGGAGCTCAGACTGGTGTaGAACTCATTATATACTACACAGCCCTTGCCTCCG | + |
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Preference number: 3 (lower is better) Translates to: VETGFSTELRLV*NSLYTTQPLPP Trigger: CGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCGTAGAGAACCCTGTCTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR-3UTR CAA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGCTTCCCGTTCTTTTGTaGAGACAGGGTTCTCTACGG | + |
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Preference number: 3 (lower is better) Translates to: RHLNKMVITIVEAGPTPRLPVLL*RQGSLR Trigger: CCGTAGAGAACCCTGTCTCAACAAAAGAACGGGAAG...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | AATAGACATTCCTCCACCCACTTCCCGTTCTTTTGTTaGGACAGGGTTCTCTACGGAGCTCAGACTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: NRHSSTHFPFFC*DRVLYGAQTGV Trigger: CACACCAGTCTGAGCTCCGTAGAGAACCCTGTCTCAACAAAAGAACGGGAAGTGGGTGGAGGAATGTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | AGTTTCAGGGTGTGCGTTCAATTAACCATTCCTGTCTaGCTGAGGGCAGTGACTGTGTGGTTTGTGGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SFRVCVQLTIPV*LRAVTVWFVGQ Trigger: TTGCCCCACAAACCACACAGTCACTGCCCTCAGTCAGACAGGAATGGTTAATTGAACGCACACCCTGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | GTCATAGCCTCAGCCCTGAACTCTAAGCTATGGCCTTaGCTGATCAGTTTCAGGGTGTGCGTTCAATTAACC | + |
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Preference number: 3 (lower is better) Translates to: VIASALNSKLWP*LISFRVCVQLT Trigger: GGTTAATTGAACGCACACCCTGAAACTGATCAGTCAAGGCCATAGCTTAGAGTTCAGGGCTGAGGCTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR CCA 72 bp | GAACTGTTAGATCTGAAATGGCTTGAGTCAGCCTACTaGGCAGCACTTTCTGCTCCTGCATATGAGCTCACT | + |
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Preference number: 3 (lower is better) Translates to: ELLDLKWLESAY*AALSAPAYELT Trigger: AGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTCAAGCCATTTCAGATCTAACAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | GTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATaGGCTCACTGTGGTTTTTACAGTTTTAGCCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: VSLLGSTFCSCI*AHCGFYSFSLN Trigger: ATTAAGGCTAAAACTGTAAAAACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR GCA 72 bp | CCCAACCCCCAGGATAGCTGTAGCCATTTTGTTCCATaGCTGCCAACAACTTCATATCGTTGCTATAATATG | + |
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Preference number: 3 (lower is better) Translates to: PNPQDSCSHFVP*LPTTSYRCYNM Trigger: CATATTATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTATCCTGGGGGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR GCA 72 bp | ACCCCCAGGATAGCTGTAGCCATTTTGTTCCATGCCTaGCAACAACTTCATATCGTTGCTATAATATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TPRIAVAILFHA*QQLHIVAIICL Trigger: CAAGCATATTATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTATCCTGGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR CCA 72 bp | CAAATTAAAGGTCAGTATGAACTGTTAGATCTGAAATaGCTTGAGTCAGCCTACTGGGCAGCACTTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QIKGQYELLDLK*LESAYWAALSA Trigger: AGCAGAAAGTGCTGCCCAGTAGGCTGACTCAAGCCATTTCAGATCTAACAGTTCATACTGACCTTTAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | ATGCTGACCACATACCCTGTTATGTTTCCTATGTTCTaGGGTTTGTTTATCTTAAGAAATGCCACAAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: MLTTYPVMFPMF*GLFILRNATKL Trigger: AAGCTTTGTGGCATTTCTTAAGATAAACAAACCTCAGAACATAGGAAACATAACAGGGTATGTGGTCAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR TCA 72 bp | ACTTCATATCGTTGCTATAATATGCTTGCCAGTTACTaGCACAGAAAAATAATTGACTCAGAGCAGGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: TSYRCYNMLASY*HRKIIDSEQVH Trigger: ATGAACCTGCTCTGAGTCAATTATTTTTCTGTGTCAGTAACTGGCAAGCATATTATAGCAACGATATGAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR GCA 72 bp | GTTTCCTATGTTCTGAGGTTTGTTTATCTTAAGAAATaGCACAAAGCTTTAGGTAGGACCCATCAAATTAAA | + |
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Preference number: 3 (lower is better) Translates to: VSYVLRFVYLKK*HKALGRTHQIK Trigger: TTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAGATAAACAAACCTCAGAACATAGGAAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTCACCCTGCAGCCCCGTaGCCTCACGCCCTGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVHPAAP*PHALCT Trigger: GGTGCACAGGGCGTGAGGTCACGGGGCTGCAGGGTG...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTAAGCCTGTGAGTCCCTaGCCACCCTGCAGCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVKPVSP*PPCSPV Trigger: CACGGGGCTGCAGGGTGGTCAGGGACTCACAGGCTT...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGGCAGCCTCCTCAGGCTaGGGCCCAGCCTGGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRAASSG*GPAWIL Trigger: GAGAATCCAGGCTGGGCCTCAGCCTGAGGAGGCTGC...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGGCTGGAGCAGTTTGCTaGGCGCCTCCATGCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRAGAVC*APPCSV Trigger: GACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGC...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTCGCAGTCCATCACCTTaGTCTCCCCCTGAGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVRSPSP*SPPELV Trigger: TACCAGCTCAGGGGGAGAGCAAGGTGATGGACTGCG...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTCCAGTGTGGCTCTGTaGGGAATCTGGAGCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVSSVAL*GIWSPC Trigger: ACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGA...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGGGGTTTCTTGGCTGCTaGGTGCTGGGAAGGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRGFLGC*VLGREL Trigger: TAGTTCCCTTCCCAGCACTCAGCAGCCAAGAAACCC...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| 3UTR CAA 72 bp | GAGGCCGGCCCAACCCCCAGGATAGCTGTAGCCATTTaGTTCCATGCCTGCCAACAACTTCATATCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: EAGPTPRIAVAI*FHACQQLHIVA Trigger: AGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTATCCTGGGGGTTGGGCCGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGGAGAGGAGAGAATTCTaGGTTGCTCTTCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRERREF*VALLPG Trigger: CCCAGGCAGAAGAGCAACTCAGAATTCTCTCCTCTC...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGACTGGCTGTGAGCAGTaGTCTGCTCCCCTGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRTGCEQ*SAPLHR Trigger: ACGATGCAGGGGAGCAGAGCACTGCTCACAGCCAGT...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTGTCTGCAGAGGCTGTaGTGGAGGACAGCATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVCLQRL*WRTACL Trigger: CAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACA...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGGCTACTGGGTCTGTCTaGAGAGGCTGTGCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRATGSV*RGCAGG Trigger: TCCTCCAGCACAGCCTCTGCAGACAGACCCAGTAGC...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGCCAGGCTGGAGCCAGTaGTACTGGGTCTGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGPGWSQ*YWVCLQ Trigger: CTGCAGACAGACCCAGTAGCACTGGCTCCAGCCTGG...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTCTGCAGAGGCTGTGCTaGAGGACAGCATGTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVLQRLC*RTACLS Trigger: AGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAG...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTGAGAACAAGAATTGCTaGTCGCCCCTGACGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVENKNC*SPLTIF Trigger: GAAGATCGTCAGGGGCGATCAGCAATTCTTGTTCTC...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTTCTTGGCTGCTGAGTaGTGGGAAGGGAACTACAAG | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVFLAAE*WEGNYK Trigger: CTTGTAGTTCCCTTCCCAGCACTCAGCAGCCAAGAA...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGGCTGCAGCCATCAGATaGTCGGACTTTTCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRAAAIR*SDFSST Trigger: TGTGCTGGAAAAGTCCGATCATCTGATGGCTGCAGC...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGATTCTCGCTGTCTTCTaGCTGGCTGTGAGCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRILAVF*LAVSSA Trigger: AGCACTGCTCACAGCCAGTCAGAAGACAGCGAGAAT...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGTCAATGAGCTCTCGGTaGTCACCTAACATCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRSMSSR*SPNICS Trigger: GGAACAGATGTTAGGTGATCACCGAGAGCTCATTGA...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCTAACAAATGCTGGCTaGCCTTTGTTCTCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRLTNAG*PLFSRS Trigger: AGACCTGGAGAACAAAGGGCAGCCAGCATTTGTTAG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCAGCAAACAGACCTTTaGCTGCAGCCATCAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRQQTDL*LQPSDD Trigger: ATCATCTGATGGCTGCAGCCAAAGGTCTGTTTGCTG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTCCCTCTGAACATCAATaGCATGGAGCCATTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVPSEHQ*HGAITA Trigger: AGCAGTAATGGCTCCATGCCATTGATGTTCAGAGGG...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGCCACTTCTTCCCCTCTaGACATCAATGGCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGPLLPL*TSMAWS Trigger: GCTCCATGCCATTGATGTTCAGAGGGGAAGAAGTGG...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGACGGTTTTCCTCACTTaGGTTCTGAATGTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRTVFLT*VLNVWI Trigger: GATCCAGACATTCAGAACTCAAGTGAGGAAAACCGT...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGAGCATGTTTGTCTTCTaGTTGGAGGCAGCATGCATA | + |
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Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRSMFVF*LEAACI Trigger: TATGCATGCTGCCTCCAAGCAGAAGACAAACATGCT...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGGAGAGAATTCTGAGTTaGTCTTCTGCCTGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRERILS*SSAWVV Trigger: CACCACCCAGGCAGAAGAGCAACTCAGAATTCTCTC...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATTGGAGCCAGTGCTACTaGGTCTGTCTGCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDWSQCY*VCLQRL Trigger: CAGCCTCTGCAGACAGACCCAGTAGCACTGGCTCCA...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCATAGCTGCCCTTTCTaGTGCTTGACTTTCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRHSCPF*CLTFLS Trigger: AGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGAGGCAACTCTTCCTGTaGGAATTCAACCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRRQLFL*EFNHFF Trigger: GAAGAAGTGGTTGAATTCCCACAGGAAGAGTTGCCT...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTCCCACTTCCTGAGGTaGCGTTTAGTGGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRSHFLR*RLVENK Trigger: CTTGTTCTCCACTAAACGCCACCTCAGGAAGTGGGA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAGGGCCTCCGATGTTCTaGGCTGCTGCCCATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAIGPPMF*AAAHLQ Trigger: TTGGAGATGGGCAGCAGCTCAGAACATCGGAGGCCC...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGGTATTATCCCATTCTTaGCTCACTGCAGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRVLSHS*LTAAFF Trigger: GAAGAAAGCTGCAGTGAGGCAAGAATGGGATAATAC...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTGTTTGTCTTCTGCTTaGAGGCAGCATGCATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVCLSSA*RQHAYL Trigger: AAGATATGCATGCTGCCTCCAAGCAGAAGACAAACA...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTTGTTCTTGGATTAACTaGTGTGAACTTCCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESAYWAALSAPAYELTVVCSWIN*CELPTS Trigger: GGAAGTGGGAAGTTCACACCAGTTAATCCAAGAACA...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTCCTGTGTCAGGTATTaGTCAGAGAGAATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRSCVRY*SERISF Trigger: GAAGGAGATTCTCTCTGATCAATACCTGACACAGGA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCTGAGGCTCTATGATTaGTTCATTAAGGATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSDWCGTHYILHSPCLRLRLYD*FIKDRL Trigger: CAGTCTATCCTTAATGAATCAATCATAGAGCCTCAG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATACCAGGTAGCTGGAGCTaGAGTCTACAGGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAIPGSWS*SLQAQQ Trigger: CTGCTGAGCCTGTAGACTTCAGCTCCAGCTACCTGG...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTACTATTCTCTTCTCTaGGGGAGAGGATTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRYYSLL*GRGFQL Trigger: CAGCTGAAATCCTCTCCCTCAGAGAAGAGAATAGTA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR TCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGAGACTCTCCACCTCTaGGTGAAGAGACGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDETLHL*VKRRFS Trigger: GGAAAACCGTCTCTTCACTCAGAGGTGGAGAGTCTC...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGCAATGCTCTATTCTTTaGCTTGTGCATCTCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRQCSIL*LVHLMT Trigger: CGTCATGAGATGCACAAGTCAAAGAATAGAGCATTG...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTCTTCCTTTAGTTGGTaGAGAAACCTCTCTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRSSFSW*RNLSVL Trigger: GAGTACAGAGAGGTTTCTTCACCAACTAAAGGAAGA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGCTAGCAGCGGCTTTTaGTTCCTTGTGTTTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDASSGF*FLVFST Trigger: GGTGCTAAACACAAGGAAGCAAAAGCCGCTGCTAGC...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGATCTGTTCCAGCTGCTaGCTTGTCTCTACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGICSSC*LVSTSF Trigger: GAAAGAAGTAGAGACAAGGCAGCAGCTGGAACAGAT...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATATGTTCAGGTGGGCCTTaGTGGCTGAATTCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAICSGGP*WLNSAV Trigger: CACTGCAGAATTCAGCCATCAAGGCCCACCTGAACA...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATTTGAACTGTTCCCACTaGCAGGAGACACAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDLNCSH*QETQYC Trigger: GCAATACTGTGTCTCCTGTCAGTGGGAACAGTTCAA...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATCTTGACAGCATCCGTTaGATTCAGAGCAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDLDSIR*IQSSFL Trigger: CAGAAAGCTGCTCTGAATGCAACGGATGCTGTCAAG...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR GCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTGCTTGGAGGCAGCATaGATATCTTGTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRCLEAA*ISCFLF Trigger: GAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATAGCTGCCCTTTCTGGTaGTTGACTTTCTTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDSCPFW*LTFLSG Trigger: TCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCT...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTTCTTTTCCCAGTTCTaGTCCTTCTCTATAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHLNKMVITIVEAGPTPRFFSQF*SFSITS Trigger: GGAAGTTATAGAGAAGGAGCAGAACTGGGAAAAGAA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGACTTCATTAAGAGCCTaGGGCTCTATGATTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGTSLRA*GSMIDS Trigger: TGAATCAATCATAGAGCCTCAGGCTCTTAATGAAGT...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAAGTTGCTCTTCTGCCTaGGTGGTGTTAGCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAISCSSA*VVLASQ Trigger: CTGTGATGCTAACACCACCCAGGCAGAAGAGCAACT...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATCAACACGGGGTTTCTTaGCTGCTGAGTGCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYQHGVS*LLSAGK Trigger: CTTCCCAGCACTCAGCAGCCAAGAAACCCCGTGTTG...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTTCTGAGTTGCTCTTCTaGCTGGGTGGTGTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDASELLF*LGGVSI Trigger: GATGCTAACACCACCCAGGCAGAAGAGCAACTCAGA...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGACTTCTTTCCGAAGTTaGATTTCACTCTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGTSFRS*ISLSLR Trigger: CCTTAAAGAGAGTGAAATCCAACTTCGGAAAGAAGT...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATACTCCTCAGAACATCCTaGAGAGGAGAGAATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAILLRTS*RGENSE Trigger: CTCAGAATTCTCTCCTCTCCAGGATGTTCTGAGGAG...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTTCAGGAGTTGCCCGGTaGACTGTTAGATCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDASGVAR*TVRSFT Trigger: TGTGAATGATCTAACAGTTCACCGGGCAACTCCTGA...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTTGGAGGAGTTCTTTGTaGCTGGGTAGCGATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDAWRSSL*LGSDFL Trigger: CAGAAAATCGCTACCCAGTCACAAAGAACTCCTCCA...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTGCCCTTTCTGGTGCTTaGCTTTCTTGTCTGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDAALSGA*LSCLEL Trigger: TAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGC...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAGCTGGCTCGAAAATATaGGTTGGGAAATTATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAIAGSKI*VGKLLA Trigger: GGCCAATAATTTCCCAACCCATATTTTCGAGCCAGC...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATGTGAGCGATATGAGCTaGTCATCTGTGGTAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYVSDMS*SSVVTM Trigger: CATGGTTACCACAGATGAGCAGCTCATATCGCTCAC...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATTCTTCTACCCATAGCTaGCCTTTCTGGTGCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYSSTHS*PFWCLT Trigger: AGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGA...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATAGCCCTTGTTACATTTaGAAACCCTGTGCGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYSPCYI*KPCALT Trigger: CGTAAGCGCACAGGGTTTCCAAATGTAACAAGGGCT...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATTCCTCACTTGAGTTCTaGATGTCTGGATCAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYSSLEF*MSGSIG Trigger: GCCTATTGATCCAGACATTCAGAACTCAAGTGAGGA...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTCTTGGCGTTAAAGACTaGACTGCTGGGAAATTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDALGVKD*TAGKLV Trigger: TACTAATTTCCCAGCAGTTCAGTCTTTAACGCCAAG...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS-3UTR TCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTCAGTCCACAGTTGATTaGTTAACTCGGAATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDAQSTVD*LTRNSL Trigger: AAGAGAATTCCGAGTTAATCAATCAACTGTGGACTG...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR GCA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTCAGGAGACACAGTATTaGATTTTGAACTCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHCGFYSFSLNKLTEKDAQETQY*ILNSLK Trigger: CTTCAGAGAGTTCAAAATGCAATACTGTGTCTCCTG...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR GCA 90 bp | CTTAAGAAATGCCACAAAGCTTTAGGTAGGACCCATCAAATTAAAGGTCAGTATCCATTCTTGCCTCACTaGAGCTTTCTTCTTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKKCHKALGRTHQIKGQYPFLPH*SFLLYF Trigger: AAAGTAAAGAAGAAAGCTGCAGTGAGGCAAGAATGG...ATACTGACCTTTAATTTGATGGGTCCTACCTAAAGCTTTGTGGCATTTCTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CCA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATATTCAGTCTTTGTTCTTaGATTAACTGGTGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IAVAILFHACQQLHIVAIFSLCS*INWCEL Trigger: AAGTTCACACCAGTTAATCCAAGAACAAAGACTGAA...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| 3UTR CAA 72 bp | TTATCACTGAGACAAACTGAAAACAGAAGCCAACATTaGAGAAACAGTCAGTACATGAAAGACAATCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLRQTENRSQH*RNSQYMKDNPF Trigger: AAATGGATTGTCTTTCATGTACTGACTGTTTCTCAAATGTTGGCTTCTGTTTTCAGTTTGTCTCAGTGATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | ATAATGTCCTTCCTCTGCACCAGGGCCTCCGATGTTCTGAGCTGCTaGCCATCTCCAAGCACAGTGGGCTCCTCTGACAACACGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IMSFLCTRASDVLSC*PSPSTVGSSDNTGF Trigger: AAACCCCGTGTTGTCAGAGGAGCCCACTGTGCTTGGAGATGGGCAGCAGCTCAGAACATCGGAGGCCCTGGTGCAGAGGAAGGACATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CCA 90 bp | CCAGGCTGGAGCCAGTGCTACTGGGTCTGTCTGCAGAGGCTGTGCTaGAGGACAGCATGTTTGTCTTCTGCTTGGAGGCAGCATGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PGWSQCYWVCLQRLC*RTACLSSAWRQHAY Trigger: ATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACAGACCCAGTAGCACTGGCTCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | GGAAGGGAACTACAAGGCGGCTGTGACAGGCTAACAAATGCTGGCTaGCCTTTGTTCTCCAGGTCTTCTCCCATGTGCGAGACTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRELQGGCDRLTNAG*PLFSRSSPMCETLH Trigger: GTGGAGAGTCTCGCACATGGGAGAAGACCTGGAGAACAAAGGGCAGCCAGCATTTGTTAGCCTGTCACAGCCGCCTTGTAGTTCCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 90 bp | GTTTCTGCTGCTCTATCAGCTGGAGCAGTTTGCTGCGCGCCTCCATaGTCTGTCGGTTCAACTCTGCAATCCGCTCCTCCATGCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSAALSAGAVCCAPP*SVGSTLQSAPPCYL Trigger: CAAGTAGCATGGAGGAGCGGATTGCAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | TCAAGCCCACAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTTGCTaGGCGCCTCCATGCTCTGTCGGTTCAACTCTGCAATCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPQVSAALSAGAVC*APPCSVGSTLQSAP Trigger: AGGAGCGGATTGCAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGGGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | GGTTCAAGCCCACAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTTaGTGCGCGCCTCCATGCTCTGTCGGTTCAACTCTGCAATCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSPQVSAALSAGAV*CAPPCSVGSTLQSA Trigger: AGCGGATTGCAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGGGCTTGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CCA 90 bp | AGTCCATCACCTTGCTCTCCCCCTGAGCTGGTAATATTGTTCAGGTaGGCCTTGATGGCTGAATTCTGCAGTGTGAGCTCGGCGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPCSPPELVILFR*ALMAEFCSVSSAIR Trigger: CCGGATCGCCGAGCTCACACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGGTGATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGCTGGCACTTCCCTGTTaGCGTGGCTCCCGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RHLNKMVITIVEAGPTPRLALPC*RGSRSP Trigger: TGGACTGCGGGAGCCACGCAAACAGGGAAGTGCCAG...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | AGAATGCTGGCTGAGGGAGTTAGGCAATTCATTCTCGCTGTCTTCTaGCTGGCTGTGAGCAGTGCTCTGCTCCCCTGCATCGTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMLAEGVRQFILAVF*LAVSSALLPCIVDF Trigger: GAAGTCGACGATGCAGGGGAGCAGAGCACTGCTCACAGCCAGTCAGAAGACAGCGAGAATGAATTGCCTAACTCCCTCAGCCAGCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | GCCTGGATTCTCTTGACAGCATCCGTTGCATTCAGAGCAGCTTTCTaGTCCTCGGCTGAAAGCTCCGAGGACGGAGATCCTGGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AWILLTASVAFRAAF*SSAESSEDGDPGGV Trigger: AACTCCTCCAGGATCTCCGTCCTCGGAGCTTTCAGCCGAGGATCAGAAAGCTGCTCTGAATGCAACGGATGCTGTCAAGAGAATCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGAATGCTGGCTGCCCTTaGTTCTCCAGGTCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSDWCGTHYILHSPCLRNAGCP*FSRSSP Trigger: GGGAGAAGACCTGGAGAACAAAGGGCAGCCAGCATT...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGACAACACGGGGTTTCTaGGCTGCTGAGTGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSDWCGTHYILHSPCLRTTRGF*AAECWE Trigger: TTCCCAGCACTCAGCAGCCAAGAAACCCCGTGTTGT...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | CTGAGGGAGTTAGGCAATTCATTCTCGCTGTCTTCTGACTGGCTGTaGGCAGTGCTCTGCTCCCCTGCATCGTCGACTTCATTAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRELGNSFSLSSDWL*AVLCSPASSTSLRA Trigger: GGCTCTTAATGAAGTCGACGATGCAGGGGAGCAGAGCACTGCTCACAGCCAGTCAGAAGACAGCGAGAATGAATTGCCTAACTCCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGTGGAGGACAGCATGTTaGTCTTCTGCTTGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSDWCGTHYILHSPCLRWRTAC*SSAWRQ Trigger: CTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCA...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCCTGAGCTGGTAATATaGTTCAGGTGGGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RSSDWCGTHYILHSPCLRPELVI*FRWALM Trigger: CATCAAGGCCCACCTGAACAATATTACCAGCTCAGG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | CTGAGGGAGAGGATTTCAGCTGTCAGGGCATCAATGAGCTCTCGGTaGTCACCTAACATCTGTTCCAGCTGCTGCCTTGTCTCTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRERISAVRASMSSR*SPNICSSCCLVSTS Trigger: AGAAGTAGAGACAAGGCAGCAGCTGGAACAGATGTTAGGTGATCACCGAGAGCTCATTGATGCCCTGACAGCTGAAATCCTCTCCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | TGTGTGAGCGATATGAGCTGCTCATCTGTGGTAACCATGTACTGCTaGAGTCTCGCCTGCATGGTACTATTCTCTTCTCTGAGGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVSDMSCSSVVTMYC*SLACMVLFSSLRER Trigger: CCTCTCCCTCAGAGAAGAGAATAGTACCATGCAGGCGAGACTTCAGCAGTACATGGTTACCACAGATGAGCAGCTCATATCGCTCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | GTGCGAGACTCTCCACCTCTGAGTGAAGAGACGGTTTTCCTCACTTaGGTTCTGAATGTCTGGATCAATAGGCAGGGCCTTCTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRDSPPLSEETVFLT*VLNVWINRQGLLFP Trigger: TGGGAAAAGAAGGCCCTGCCTATTGATCCAGACATTCAGAACTCAAGTGAGGAAAACCGTCTCTTCACTCAGAGGTGGAGAGTCTCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CCA 90 bp | TCAGAACATCCTGGAGAGGAGAGAATTCTGAGTTGCTCTTCTGCCTaGGTGGTGTTAGCATCACAGCTGGCTCGAAAATATGGGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEHPGEERILSCSSA*VVLASQLARKYGLG Trigger: TCCCAACCCATATTTTCGAGCCAGCTGTGATGCTAACACCACCCAGGCAGAAGAGCAACTCAGAATTCTCTCCTCTCCAGGATGTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | GATAGACTGGGTGACAGGGTCTTGATTTATTCCAGTGTGGCTCTGTaGGGAATCTGGAGCCCTTGTTACATTTGGAAACCCTGTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DRLGDRVLIYSSVAL*GIWSPCYIWKPCAL Trigger: AAGCGCACAGGGTTTCCAAATGTAACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGAATAAATCAAGACCCTGTCACCCAGTCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | TGTTCTCCAGGTCTTCTCCCATGTGCGAGACTCTCCACCTCTGAGTaGAGAGACGGTTTTCCTCACTTGAGTTCTGAATGTCTGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSPGLLPCARLSTSE*RDGFPHLSSECLDQ Trigger: TTGATCCAGACATTCAGAACTCAAGTGAGGAAAACCGTCTCTTCACTCAGAGGTGGAGAGTCTCGCACATGGGAGAAGACCTGGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTAGTATTATCCCATTCTaGCCTCACTGCAGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESAYWAALSAPAYELTVVSIIPF*PHCSFL Trigger: AAGAAAGCTGCAGTGAGGCAAGAATGGGATAATACT...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGCTCAGACTGGTGTGGAACTCATTATATACTACACAGCCCTTGCCTCCGGCCAATGCTCTATTCTTaGACTTGTGCATCTCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSDWCGTHYILHSPCLRPMLYS*TCASHD Trigger: GTCATGAGATGCACAAGTCAAAGAATAGAGCATTGG...CCGGAGGCAAGGGCTGTGTAGTATATAATGAGTTCCACACCAGTCTGAGCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTGCTCGAAAATATGGGTaGGGAAATTATTGGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESAYWAALSAPAYELTVVARKYG*GNYWPD Trigger: ATCTGGCCAATAATTTCCCAACCCATATTTTCGAGC...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCCTACTGGGCAGCACTTTCTGCTCCTGCATATGAGCTCACTGTGGTTACACAGTATTGCATTTaGAACTCTCTGAAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESAYWAALSAPAYELTVVTQYCI*NSLKPP Trigger: TGGAGGCTTCAGAGAGTTCAAAATGCAATACTGTGT...AACCACAGTGAGCTCATATGCAGGAGCAGAAAGTGCTGCCCAGTAGGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | GGTCTGTCTGCAGAGGCTGTGCTGGAGGACAGCATGTTTGTCTTCTaGTTGGAGGCAGCATGCATATCTTGTTTTCTTTTCACTTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSAEAVLEDSMFVF*LEAACISCFLFTLA Trigger: AGCTAAAGTGAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGATGTTTGTCTTCTGCTaGGAGGCAGCATGCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: RHLNKMVITIVEAGPTPRMFVFC*EAACIS Trigger: AGATATGCATGCTGCCTCCAAGCAGAAGACAAACAT...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGAGAGAATTCTGAGTaGCTCTTCTGCCTGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDGENSE*LFCLGG Trigger: ACCACCCAGGCAGAAGAGCAACTCAGAATTCTCTCC...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATCTGGGTGACAGGGTCTaGATTTATTCCAGTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVWFVGQLLDPNNHYLLDLGDRV*IYSSVA Trigger: AGCCACACTGGAATAAATCAAGACCCTGTCACCCAG...ATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 90 bp | GGCTCTATGATTGATTCATTAAGGATAGACTGGGTGACAGGGTCTTaGTTTATTCCAGTGTGGCTCTGTGAGGAATCTGGAGCCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSMIDSLRIDWVTGS*FIPVWLCEESGALV Trigger: AACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGAATAAATCAAGACCCTGTCACCCAGTCTATCCTTAATGAATCAATCATAGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 90 bp | CTCCCCTGCATCGTCGACTTCATTAAGAGCCTGAGGCTCTATGATTaGTTCATTAAGGATAGACTGGGTGACAGGGTCTTGATTTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPCIVDFIKSLRLYD*FIKDRLGDRVLIYS Trigger: GGAATAAATCAAGACCCTGTCACCCAGTCTATCCTTAATGAATCAATCATAGAGCCTCAGGCTCTTAATGAAGTCGACGATGCAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CCA 90 bp | CTCTTCCTGTGGGAATTCAACCACTTCTTCCCCTCTGAACATCAATaGCATGGAGCCATTACTGCTTATAACAGGACCCTCTACATTATC | + |
|
Preference number: 5 (lower is better) Translates to: LFLWEFNHFFPSEHQ*HGAITAYNRTLYII Trigger: GATAATGTAGAGGGTCCTGTTATAAGCAGTAATGGCTCCATGCCATTGATGTTCAGAGGGGAAGAAGTGGTTGAATTCCCACAGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAGCGGCTTTTGCTTCCTaGTGTTTAGCACCTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IAVAILFHACQQLHIVAIAAFAS*CLAPVP Trigger: TGGGACAGGTGCTAAACACAAGGAAGCAAAAGCCGC...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | AGACATTTGAACAAAATGGTCATTACCATTGTTGAGGCCGGCCCAACCCCCAGGTGGTGCTTGACTTTCTaGTCTGGAGTTATTTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHLNKMVITIVEAGPTPRWCLTF*SGVIYH Trigger: GTGATAAATAACTCCAGACAAGAAAGTCAAGCACCA...CCTGGGGGTTGGGCCGGCCTCAACAATGGTAATGACCATTTTGTTCAAATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | GTGTGGTTTGTGGGGCAACTACTGGACCCCAACAATCATTACTTACTAGATGGGACAGGAGACACAGTATaGCATTTTGAACTCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VWFVGQLLDPNNHYLLDGTGDTV*HFELSE Trigger: TTCAGAGAGTTCAAAATGCAATACTGTGTCTCCTGT...CCCATCTAGTAAGTAATGATTGTTGGGGTCCAGTAGTTGCCCCACAAACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CCA 90 bp | ACCCTCTACATTATCCACAAGTCTTCTACCCATAGCTGCCCTTTCTaGTGCTTGACTTTCTTGTCTGGAGTTATTTATCACAGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLYIIHKSSTHSCPF*CLTFLSGVIYHRTV Trigger: AACTGTCCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGACTTGTGGATAATGTAGAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | GCTCACTGTGGTTTTTACAGTTTTAGCCTTAATAAGCTGACAGAGAAAGATGCTTTGTTCAGGTGGGCCTaGATGGCTGAATTCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AHCGFYSFSLNKLTEKDALFRWA*MAEFCS Trigger: ACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAA...AGCATCTTTCTCTGTCAGCTTATTAAGGCTAAAACTGTAAAAACCACAGTGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 90 bp | CTCTACATTATCCACAAGTCTTCTACCCATAGCTGCCCTTTCTGGTaGTTGACTTTCTTGTCTGGAGTTATTTATCACAGGACAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYIIHKSSTHSCPFW*LTFLSGVIYHRTVL Trigger: AAGAACTGTCCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGACTTGTGGATAATGTAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATAGACGGTTTTCCTCACTaGAGTTCTGAATGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IAVAILFHACQQLHIVAIDGFPH*SSECLD Trigger: ATCCAGACATTCAGAACTCAAGTGAGGAAAACCGTC...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 90 bp | ACATTATCCACAAGTCTTCTACCCATAGCTGCCCTTTCTGGTGCTTaGCTTTCTTGTCTGGAGTTATTTATCACAGGACAGTTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TLSTSLLPIAALSGA*LSCLELFITGQFLM Trigger: CATTAAGAACTGTCCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGACTTGTGGATAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS-3UTR CAA 90 bp | ATAGCTGTAGCCATTTTGTTCCATGCCTGCCAACAACTTCATATCGTTGCTATACTTCAAAGCTTTTTCTaGAAGTTCCCAGTGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: IAVAILFHACQQLHIVAILQSFF*KFPVHQ Trigger: TTGGTGCACTGGGAACTTCAAGAAAAAGCTTTGAAG...TATAGCAACGATATGAAGTTGTTGGCAGGCATGGAACAAAATGGCTACAGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 72 bp | GAGCTGCTGCCCATCTCCAAGCACAGTGGGCTCCTCTaGCAACACGGGGTTTCTTGGCTGCTGAGTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELLPISKHSGLL*QHGVSWLLSAG Trigger: CCCAGCACTCAGCAGCCAAGAAACCCCGTGTTGTCAGAGGAGCCCACTGTGCTTGGAGATGGGCAGCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 72 bp | TCCTTCCTCTGCACCAGGGCCTCCGATGTTCTGAGCTaGTGCCCATCTCCAAGCACAGTGGGCTCCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFLCTRASDVLS*CPSPSTVGSSD Trigger: GTCAGAGGAGCCCACTGTGCTTGGAGATGGGCAGCAGCTCAGAACATCGGAGGCCCTGGTGCAGAGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 72 bp | GTGGGCTCCTCTGACAACACGGGGTTTCTTGGCTGCTaGGTGCTGGGAAGGGAACTACAAGGCGGCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGSSDNTGFLGC*VLGRELQGGCD Trigger: GTCACAGCCGCCTTGTAGTTCCCTTCCCAGCACTCAGCAGCCAAGAAACCCCGTGTTGTCAGAGGAGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 72 bp | GCGTGGCTCCCGCAGTCCATCACCTTGCTCTCCCCCTaGGCTGGTAATATTGTTCAGGTGGGCCTTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: AWLPQSITLLSP*AGNIVQVGLDG Trigger: GCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGGTGATGGACTGCGGGAGCCACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 72 bp | GCTCCTCTGACAACACGGGGTTTCTTGGCTGCTGAGTaGTGGGAAGGGAACTACAAGGCGGCTGTGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: APLTTRGFLAAE*WEGNYKAAVTG Trigger: GCCTGTCACAGCCGCCTTGTAGTTCCCTTCCCAGCACTCAGCAGCCAAGAAACCCCGTGTTGTCAGAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CAA 90 bp | GGCTCCCGCAGTCCATCACCTTGCTCTCCCCCTGAGCTGGTAATATaGTTCAGGTGGGCCTTGATGGCTGAATTCTGCAGTGTGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSRSPSPCSPPELVI*FRWALMAEFCSVSS Trigger: CGAGCTCACACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGGTGATGGACTGCGGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS TCA 72 bp | TCCTTGTGTTTAGCACCTGTCCCAGGTAGCTGGAGCTaGAGTCTACAGGCTCAGCAGCCTCCTCAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLCLAPVPGSWS*SLQAQQPPQAE Trigger: CTCAGCCTGAGGAGGCTGCTGAGCCTGTAGACTTCAGCTCCAGCTACCTGGGACAGGTGCTAAACACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS GCA 72 bp | AACGTCCAGGCTGGAGCCAGTGCTACTGGGTCTGTCTaGAGAGGCTGTGCTGGAGGACAGCATGTTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NVQAGASATGSV*RGCAGGQHVCL Trigger: AAGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACAGACCCAGTAGCACTGGCTCCAGCCTGGACGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
||
| CDS CCA 72 bp | AGGTTCAAGCCCACAAGTTTCTGCTGCTCTATCAGCTaGAGCAGTTTGCTGCGCGCCTCCATGCTCTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RFKPTSFCCSIS*SSLLRASMLCR Trigger: CCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGGGCTTGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | TCACCTTGCTCTCCCCCTGAGCTGGTAATATTGTTCAGGTGGGCCTaGATGGCTGAATTCTGCAGTGTGAGCTCGGCGATCCGGGCCATA | + |
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Preference number: 6 (lower is better) Translates to: SPCSPPELVILFRWA*MAEFCSVSSAIRAI Trigger: TATGGCCCGGATCGCCGAGCTCACACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | AGGTTCAAGCCCACAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTaGCTGCGCGCCTCCATGCTCTGTCGGTTCAACTCTGCAATCCGC | + |
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Preference number: 6 (lower is better) Translates to: RFKPTSFCCSISWSS*LRASMLCRFNSAIR Trigger: GCGGATTGCAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGGGCTTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | GCTGAGGGAGTTAGGCAATTCATTCTCGCTGTCTTCTaGCTGGCTGTGAGCAGTGCTCTGCTCCCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: AEGVRQFILAVF*LAVSSALLPCI Trigger: GATGCAGGGGAGCAGAGCACTGCTCACAGCCAGTCAGAAGACAGCGAGAATGAATTGCCTAACTCCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | CTTCCATCTCGTGCTCCACTTCATGGATCACGTGTTTaGGAACGTCCAGGCTGGAGCCAGTGCTACTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPSRAPLHGSRV*ERPGWSQCYWV Trigger: GACCCAGTAGCACTGGCTCCAGCCTGGACGTTCTCAAACACGTGATCCATGAAGTGGAGCACGAGATGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | CTGCTGAGTGCTGGGAAGGGAACTACAAGGCGGCTGTaGCAGGCTAACAAATGCTGGCTGCCCTTTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSAGKGTTRRL*QANKCWLPFVL Trigger: GAGAACAAAGGGCAGCCAGCATTTGTTAGCCTGTCACAGCCGCCTTGTAGTTCCCTTCCCAGCACTCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | CTACAAGGCGGCTGTGACAGGCTAACAAATGCTGGCTaGCCTTTGTTCTCCAGGTCTTCTCCCATGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LQGGCDRLTNAG*PLFSRSSPMCE Trigger: CTCGCACATGGGAGAAGACCTGGAGAACAAAGGGCAGCCAGCATTTGTTAGCCTGTCACAGCCGCCTTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | CCACAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTTaGTGCGCGCCTCCATGCTCTGTCGGTTCAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: PQVSAALSAGAV*CAPPCSVGSTL Trigger: CAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | GGGAAATTAGTAGACACTTCACTGGCACTTCCCTGTTaGCGTGGCTCCCGCAGTCCATCACCTTGCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GKLVDTSLALPC*RGSRSPSPCSP Trigger: GGGAGAGCAAGGTGATGGACTGCGGGAGCCACGCAAACAGGGAAGTGCCAGTGAAGTGTCTACTAATTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | CCCACAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTaGCTGCGCGCCTCCATGCTCTGTCGGTTCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: PTSFCCSISWSS*LRASMLCRFNS Trigger: AGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | CTCTTGACAGCATCCGTTGCATTCAGAGCAGCTTTCTaGTCCTCGGCTGAAAGCTCCGAGGACGGAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LLTASVAFRAAF*SSAESSEDGDP Trigger: AGGATCTCCGTCCTCGGAGCTTTCAGCCGAGGATCAGAAAGCTGCTCTGAATGCAACGGATGCTGTCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | TCACGCCCTGTGCACCGCTCATACTCTTCCATCTCGTaGTCCACTTCATGGATCACGTGTTTGAGAACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRPVHRSYSSIS*STSWITCLRTS Trigger: GGACGTTCTCAAACACGTGATCCATGAAGTGGAGCACGAGATGGAAGAGTATGAGCGGTGCACAGGGCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | CAAGTTTCTGCTGCTCTATCAGCTGGAGCAGTTTGCTaGGCGCCTCCATGCTCTGTCGGTTCAACTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QVSAALSAGAVC*APPCSVGSTLQ Trigger: TTGCAGAGTTGAACCGACAGAGCATGGAGGCGCGCAGCAAACTGCTCCAGCTGATAGAGCAGCAGAAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CCA 72 bp | CCTTGCTCTCCCCCTGAGCTGGTAATATTGTTCAGGTaGGCCTTGATGGCTGAATTCTGCAGTGTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PCSPPELVILFR*ALMAEFCSVSS Trigger: CGAGCTCACACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TCTTCCATCTCGTGCTCCACTTCATGGATCACGTGTTaGAGAACGTCCAGGCTGGAGCCAGTGCTACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSISCSTSWITC*RTSRLEPVLLG Trigger: ACCCAGTAGCACTGGCTCCAGCCTGGACGTTCTCAAACACGTGATCCATGAAGTGGAGCACGAGATGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TCTCCCCCTGAGCTGGTAATATTGTTCAGGTGGGCCTaGATGGCTGAATTCTGCAGTGTGAGCTCGGCGATC | + |
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Preference number: 6 (lower is better) Translates to: SPPELVILFRWA*MAEFCSVSSAI Trigger: GATCGCCGAGCTCACACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | GCGCTTACGAGGAACATCAGCAAACAGACCTTTGGCTaGAGCCATCAGATGATCGGACTTTTCCAGCACATC | + |
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Preference number: 6 (lower is better) Translates to: ALTRNISKQTFG*SHQMIGLFQHI Trigger: GATGTGCTGGAAAAGTCCGATCATCTGATGGCTGCAGCCAAAGGTCTGTTTGCTGATGTTCCTCGTAAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | AGTCCATCACCTTGCTCTCCCCCTGAGCTGGTAATATaGTTCAGGTGGGCCTTGATGGCTGAATTCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPSPCSPPELVI*FRWALMAEFCS Trigger: ACTGCAGAATTCAGCCATCAAGGCCCACCTGAACAATATTACCAGCTCAGGGGGAGAGCAAGGTGATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | GTGAACTTCCCACTTCCTGAGGTGGCGTTTAGTGGAGAACAAGAATaGCTGATCGCCCCTGACGATCTTCTTGAACTGTTCCCACTGACA | + |
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Preference number: 6 (lower is better) Translates to: VNFPLPEVAFSGEQE*LIAPDDLLELFPLT Trigger: TGTCAGTGGGAACAGTTCAAGAAGATCGTCAGGGGCGATCAGCAATTCTTGTTCTCCACTAAACGCCACCTCAGGAAGTGGGAAGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | AAGCTCCGAGGACGGAGATCCTGGAGGAGTTCTTTGTaGCTGGGTAGCGATTTTCTGCTGAATATCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KLRGRRSWRSSL*LGSDFLLNISP Trigger: TGGACTGATATTCAGCAGAAAATCGCTACCCAGTCACAAAGAACTCCTCCAGGATCTCCGTCCTCGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | TTCCTGAGGTGGCGTTTAGTGGAGAACAAGAATTGCTaGTCGCCCCTGACGATCTTCTTGAACTGTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: FLRWRLVENKNC*SPLTIFLNCSH Trigger: GTGGGAACAGTTCAAGAAGATCGTCAGGGGCGATCAGCAATTCTTGTTCTCCACTAAACGCCACCTCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TGTGGCTCTGTGAGGAATCTGGAGCCCTTGTTACATTaGGAAACCCTGTGCGCTTACGAGGAACATCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: CGSVRNLEPLLH*ETLCAYEEHQQ Trigger: TTGCTGATGTTCCTCGTAAGCGCACAGGGTTTCCAAATGTAACAAGGGCTCCAGATTCCTCACAGAGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | CCACTTCCTGAGGTGGCGTTTAGTGGAGAACAAGAATaGCTGATCGCCCCTGACGATCTTCTTGAACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PLPEVAFSGEQE*LIAPDDLLELF Trigger: GAACAGTTCAAGAAGATCGTCAGGGGCGATCAGCAATTCTTGTTCTCCACTAAACGCCACCTCAGGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | TGCTACTGGGTCTGTCTGCAGAGGCTGTGCTGGAGGACAGCATGTTaGTCTTCTGCTTGGAGGCAGCATGCATATCTTGTTTTCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: CYWVCLQRLCWRTAC*SSAWRQHAYLVFFS Trigger: TGAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACAGACCCAGTAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | ACATCAGCAAACAGACCTTTGGCTGCAGCCATCAGATaGTCGGACTTTTCCAGCACATCCTGTGTCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: TSANRPLAAAIR*SDFSSTSCVRY Trigger: ATACCTGACACAGGATGTGCTGGAAAAGTCCGATCATCTGATGGCTGCAGCCAAAGGTCTGTTTGCTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | GGTGACAGGGTCTTGATTTATTCCAGTGTGGCTCTGTaGGGAATCTGGAGCCCTTGTTACATTTGGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: GDRVLIYSSVAL*GIWSPCYIWKP Trigger: GGGTTTCCAAATGTAACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGAATAAATCAAGACCCTGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | TCTCCACCTCTGAGTGAAGAGACGGTTTTCCTCACTTaGGTTCTGAATGTCTGGATCAATAGGCAGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPPLSEETVFLT*VLNVWINRQGL Trigger: AAGGCCCTGCCTATTGATCCAGACATTCAGAACTCAAGTGAGGAAAACCGTCTCTTCACTCAGAGGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | GCAGAGGCTGTGCTGGAGGACAGCATGTTTGTCTTCTaGTTGGAGGCAGCATGCATATCTTGTTTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: AEAVLEDSMFVF*LEAACISCFLF Trigger: GAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TTATTCCAGTGTGGCTCTGTGAGGAATCTGGAGCCCTaGTTACATTTGGAAACCCTGTGCGCTTACGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LFQCGSVRNLEP*LHLETLCAYEE Trigger: TTCCTCGTAAGCGCACAGGGTTTCCAAATGTAACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | GGTCTTGATTTATTCCAGTGTGGCTCTGTGAGGAATCTGGAGCCCTaGTTACATTTGGAAACCCTGTGCGCTTACGAGGAACATCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GLDLFQCGSVRNLEP*LHLETLCAYEEHQQ Trigger: TTGCTGATGTTCCTCGTAAGCGCACAGGGTTTCCAAATGTAACAAGGGCTCCAGATTCCTCACAGAGCCACACTGGAATAAATCAAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | CTGTCTGCAGAGGCTGTGCTGGAGGACAGCATGTTTGTCTTCTGCTaGGAGGCAGCATGCATATCTTGTTTTCTTTTCACTTTAGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: LSAEAVLEDSMFVFC*EAACISCFLFTLAS Trigger: GCTAGCTAAAGTGAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTCTGCAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | CCTGACGATCTTCTTGAACTGTTCCCACTGACAGGAGACACAGTATaGCATTTTGAACTCTCTGAAGCCTCCATTCCTGGAACAGACACC | + |
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Preference number: 6 (lower is better) Translates to: PDDLLELFPLTGDTV*HFELSEASIPGTDT Trigger: GGTGTCTGTTCCAGGAATGGAGGCTTCAGAGAGTTCAAAATGCAATACTGTGTCTCCTGTCAGTGGGAACAGTTCAAGAAGATCGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | GATATGAGCTGCTCATCTGTGGTAACCATGTACTGCTaGAGTCTCGCCTGCATGGTACTATTCTCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DMSCSSVVTMYC*SLACMVLFSSL Trigger: CAGAGAAGAGAATAGTACCATGCAGGCGAGACTTCAGCAGTACATGGTTACCACAGATGAGCAGCTCATATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CCA 72 bp | TGGGAATTCAACCACTTCTTCCCCTCTGAACATCAATaGCATGGAGCCATTACTGCTTATAACAGGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: WEFNHFFPSEHQ*HGAITAYNRTL Trigger: GAGGGTCCTGTTATAAGCAGTAATGGCTCCATGCCATTGATGTTCAGAGGGGAAGAAGTGGTTGAATTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | GAGGCTGTGCTGGAGGACAGCATGTTTGTCTTCTGCTaGGAGGCAGCATGCATATCTTGTTTTCTTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: EAVLEDSMFVFC*EAACISCFLFT Trigger: AGTGAAAAGAAAACAAGATATGCATGCTGCCTCCAAGCAGAAGACAAACATGCTGTCCTCCAGCACAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | CTCGGTGATCACCTAACATCTGTTCCAGCTGCTGCCTaGTCTCTACTTCTTTCCGAAGTTGGATTTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: LGDHLTSVPAAA*SLLLSEVGFHS Trigger: AGAGTGAAATCCAACTTCGGAAAGAAGTAGAGACAAGGCAGCAGCTGGAACAGATGTTAGGTGATCACCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | TCAAAGCTTTTTCTTGAAGTTCCCAGTGCACCAATGCTCTATTCTTaGACTTGTGCATCTCATGACGGCGCACTAGATCTTCAGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SKLFLEVPSAPMLYS*TCASHDGALDLQEL Trigger: CAACTCCTGAAGATCTAGTGCGCCGTCATGAGATGCACAAGTCAAAGAATAGAGCATTGGTGCACTGGGAACTTCAAGAAAAAGCTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS TCA 72 bp | ATCGTCGACTTCATTAAGAGCCTGAGGCTCTATGATTaGTTCATTAAGGATAGACTGGGTGACAGGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IVDFIKSLRLYD*FIKDRLGDRVL Trigger: CAAGACCCTGTCACCCAGTCTATCCTTAATGAATCAATCATAGAGCCTCAGGCTCTTAATGAAGTCGACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS GCA 72 bp | ATCCACAAGTCTTCTACCCATAGCTGCCCTTTCTGGTaGTTGACTTTCTTGTCTGGAGTTATTTATCACAGG | + |
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Preference number: 6 (lower is better) Translates to: IHKSSTHSCPFW*LTFLSGVIYHR Trigger: CCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGACTTGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TTTCTTGAAGTTCCCAGTGCACCAATGCTCTATTCTTaGACTTGTGCATCTCATGACGGCGCACTAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: FLEVPSAPMLYS*TCASHDGALDL Trigger: AAGATCTAGTGCGCCGTCATGAGATGCACAAGTCAAAGAATAGAGCATTGGTGCACTGGGAACTTCAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | GTGGTGTTAGCATCACAGCTGGCTCGAAAATATGGGTaGGGAAATTATTGGCCAGATTCAAGTTTTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VVLASQLARKYG*GNYWPDSSFLW Trigger: CCACAGAAAACTTGAATCTGGCCAATAATTTCCCAACCCATATTTTCGAGCCAGCTGTGATGCTAACACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 90 bp | CACAAGTCTTCTACCCATAGCTGCCCTTTCTGGTGCTTGACTTTCTaGTCTGGAGTTATTTATCACAGGACAGTTCTTAATGGCATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HKSSTHSCPFWCLTF*SGVIYHRTVLNGMC Trigger: ACACATGCCATTAAGAACTGTCCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGAAGACTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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| CDS CAA 72 bp | TCTACCCATAGCTGCCCTTTCTGGTGCTTGACTTTCTaGTCTGGAGTTATTTATCACAGGACAGTTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: STHSCPFWCLTF*SGVIYHRTVLN Trigger: ATTAAGAACTGTCCTGTGATAAATAACTCCAGACAAGAAAGTCAAGCACCAGAAAGGGCAGCTATGGGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050897.7 |
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