Pregenerated sensors for SPG21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032388Ensembl transcript IDs: ENSMUST00000034955.8, ENSMUST00000213957.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTTGACTCTGTGCACGGGCACTGGGCTATCTGAGGTTACAGGCTaGCTGGACACTCTTGACACTGTGCACGGGCACTGGGCGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LLTLCTGTGLSEVTG*LDTLDTVHGHWAVS Trigger: TGAGACCGCCCAGTGCCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCCAGTGCCCGTGCACAGAGTCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 90 bp | GCCTCGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTaGTCCTCTTCTAACCTGGAGGTGGGTGCAGCAGTTATAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: ASTLWLCPRKHKNDR*SSSNLEVGAAVIES Trigger: GCTTTCTATAACTGCTGCACCCACCTCCAGGTTAGAAGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 90 bp | AAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTaGTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCATA | + |
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Preference number: 1 (lower is better) Translates to: KSFLRPGVFHLDVAS*SGCIPCLQEARYTI Trigger: TATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR CCA 90 bp | ATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTaGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCATACTAAG | + |
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Preference number: 1 (lower is better) Translates to: ISEAWSIPFRCGVLL*LHSLSPGGKVHHTK Trigger: CTTAGTATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR GCA 90 bp | GGGTGTATATATCTGTGTATGTGTGGGCAGATGCCAGAGAATGGATaGCCTGCAGCTAGTGTTGAGGTTACAGGCTGTGTGGATACTCTT | + |
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Preference number: 1 (lower is better) Translates to: GCIYLCMCGQMPENG*PAASVEVTGCVDTL Trigger: AAGAGTATCCACACAGCCTGTAACCTCAACACTAGCTGCAGGGCATCCATTCTCTGGCATCTGCCCACACATACACAGATATATACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR TCA 90 bp | CTATGTTCTCCATATGTATTAAAACCACTTCTATCGGGCATCTGGTaGTCTTTCAGGATAACATCTGTAATCCTAGCACTTGGGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LCSPYVLKPLLSGIW*SFRITSVILALGRW Trigger: CCACCTCCCAAGTGCTAGGATTACAGATGTTATCCTGAAAGATCACCAGATGCCCGATAGAAGTGGTTTTAATACATATGGAGAACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR CCA 90 bp | CAAGGCTATCCACAGGCTGGACGTTTTCTACATTGGATCAAGAGCTaGAGACAGTTTACTATGTTCTCCATATGTATTAAAACCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: QGYPQAGRFLHWIKS*RQFTMFSICIKTTS Trigger: AGAAGTGGTTTTAATACATATGGAGAACATAGTAAACTGTCTCCAGCTCTTGATCCAATGTAGAAAACGTCCAGCCTGTGGATAGCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGCACGGGCTGATGTGTAGGGAGTaGCCAGCAGGCTGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TGLSEVTGCLDTLDTVHGLMCRE*PAGCQP Trigger: AGGCTGGCAGCCTGCTGGCCACTCCCTACACATCAG...CCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR CAA 90 bp | GGGGCCAGTCACACTGGTTTAGAAGAGCTGACGCCTGTCATGAGATaGACAATCAGTCCGACTTCCAGAAGGGTGAGGACCAGTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GASHTGLEELTPVMR*TISPTSRRVRTSVP Trigger: GGGCACACTGGTCCTCACCCTTCTGGAAGTCGGACTGATTGTCAATCTCATGACAGGCGTCAGCTCTTCTAAACCAGTGTGACTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCCAGCACGCACTTTTACTCACAGACTCATCTCCCCAGCGTCTCAAGTATCCGGTAACAGCCAGCCGTaGTGCAGTCAGAGTGATGGA | + |
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Preference number: 2 (lower is better) Translates to: RPARTFTHRLISPASQVSGNSQP*CSQSDG Trigger: TCCATCACTCTGACTGCAGCACGGCTGGCTGTTACC...GGATACTTGAGACGCTGGGGAGATGAGTCTGTGAGTAAAAGTGCGTGCTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTGGCCAGTAGCCCAGAGGGGCAGCCTCACTCATCACAGAAGCCACTGGTCGACCCTCTGGTTATaGCCAAGAAAGCATAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QHWPVAQRGSLTHHRSHWSTLWL*PRKHKN Trigger: ATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGA...CCAGTGGCTTCTGTGATGAGTGAGGCTGCCCCTCTGGGCTACTGGCCAGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR GCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGAGAGTGGCCAGCAGGCTaGCAGCCTCGACCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SQTHLPSVSSILSYLLKGEWPAG*QPRPSG Trigger: ACCAGAGGGTCGAGGCTGGCAGCCTGCTGGCCACTC...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCCAGCACGCACTTTTACTCACAGACTCATCTCCCCAGCGTCTCAAGTATCCAACAGCCAGCCGTGCTaGAGTCAGAGTGATGGACTT | + |
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Preference number: 2 (lower is better) Translates to: RPARTFTHRLISPASQVSNSQPC*SQSDGL Trigger: AAGTCCATCACTCTGACTGCAGCACGGCTGGCTGTT...GGATACTTGAGACGCTGGGGAGATGAGTCTGTGAGTAAAAGTGCGTGCTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR CAA 90 bp | GAAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTaGCTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCAT | + |
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Preference number: 2 (lower is better) Translates to: EVISEAWSIPFRCGV*LWLHSLSPGGKVHH Trigger: ATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCACTGGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGCATCACAGAAGCCACTaGCTGAAATTCAATTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: TGTGLSEVTGCLDTLDTVHHRSH*LKFNFY Trigger: ATAAAAATTGAATTTCAGCCAGTGGCTTCTGTGATG...CACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCCAGTGCCCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR TCA 90 bp | CGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTGCTCCTCTTCTACCCAAGCTTTTGAGATaGACAGAGTGGAGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: RPSGYAQESIKMTGAPLLPKLLR*TEWRRL Trigger: AAGTCTTCTCCACTCTGTTCATCTCAAAAGCTTGGG...TAGAAGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGAGGACGTTTTCTACATTaGATCAAGAGCTGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SQTHLPSVSSILSYLLKGGRFLH*IKSWRQ Trigger: CTGTCTCCAGCTCTTGATCCAATGTAGAAAACGTCC...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR-3UTR TCA 90 bp | CTACATTGGATCAAGAGCTGGAGACAGTTTACTATGTTCTCCATATGTATTAAAACAGAAGCCACTGGCTaGAATTCAATTTTTATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LHWIKSWRQFTMFSICIKTEATG*NSIFIP Trigger: TGGAATAAAAATTGAATTTCAGCCAGTGGCTTCTGT...TTTAATACATATGGAGAACATAGTAAACTGTCTCCAGCTCTTGATCCAATGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | CTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTaGACGGGCACTGGGCGGTCTCAAGTGCTCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: LRLQAAWTLLTL*TGTGRSQVLML Trigger: GAGCATGAGCACTTGAGACCGCCCAGTGCCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | CTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTaGACGGGCACTGGGCTATCTGAGGTTACAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LRLQAAWTLLTL*TGTGLSEVTGC Trigger: GCAGCCTGTAACCTCAGATAGCCCAGTGCCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | GTGGCCAGCAGGCTGCCAGCCTCGACCCTCTGGTTATaGCCAAGAAAGCATAAAAATGACCGGTGCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: VASRLPASTLWL*PRKHKNDRCSS Trigger: AGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGAGGCTGGCAGCCTGCTGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | CTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTaGTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LRPGVFHLDVAS*SGCIPCLQEAR Trigger: CCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR CCA 72 bp | GCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTaGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACAC | + |
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Preference number: 3 (lower is better) Translates to: AWSIPFRCGVLL*LHSLSPGGKVH Trigger: GTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR-3UTR CAA 90 bp | CGTCCAGCACGCACTTTTACTCACAGACTCATCTCCCCAGCGTCTCAAGTATCCACGCCTGTCATGAGATaGACAATCAGTCCGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: RPARTFTHRLISPASQVSTPVMR*TISPTS Trigger: GGAAGTCGGACTGATTGTCAATCTCATGACAGGCGT...GGATACTTGAGACGCTGGGGAGATGAGTCTGTGAGTAAAAGTGCGTGCTGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | TATCTGTGTATGTGTGGGCAGATGCCAGAGAATGGATaGCCTGCAGCTAGTGTTGAGGTTACAGGCTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: YLCMCGQMPENG*PAASVEVTGCV Trigger: CACACAGCCTGTAACCTCAACACTAGCTGCAGGGCATCCATTCTCTGGCATCTGCCCACACATACACAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR GCA 72 bp | CTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTaGTCCTCTTCTAACCTGGAGGTGGGTGCAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: LWLCPRKHKNDR*SSSNLEVGAAV Trigger: AACTGCTGCACCCACCTCCAGGTTAGAAGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR TCA 72 bp | GCAGTTATAGAAAGCAGGAAAAGAGAGAACGCCACATaGTCCCAAGCTTTTGAGATGAACAGAGTGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: AVIESRKRENAT*SQAFEMNRVEK Trigger: CTTCTCCACTCTGTTCATCTCAAAAGCTTGGGATCATGTGGCGTTCTCTCTTTTCCTGCTTTCTATAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR TCA 72 bp | ATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTaGAAGGACACATGGAAATGCTTTATAGCCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: ISPASQVSYHIS*KDTWKCFIAIQ Trigger: CTGGATGGCTATAAAGCATTTCCATGTGTCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR CCA 72 bp | CCACAGGCTGGACGTTTTCTACATTGGATCAAGAGCTaGAGACAGTTTACTATGTTCTCCATATGTATTAAA | + |
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Preference number: 3 (lower is better) Translates to: PQAGRFLHWIKS*RQFTMFSICIK Trigger: TTTAATACATATGGAGAACATAGTAAACTGTCTCCAGCTCTTGATCCAATGTAGAAAACGTCCAGCCTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR TCA 72 bp | CCATATGTATTAAAACCACTTCTATCGGGCATCTGGTaGTCTTTCAGGATAACATCTGTAATCCTAGCACTT | + |
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Preference number: 3 (lower is better) Translates to: PYVLKPLLSGIW*SFRITSVILAL Trigger: AAGTGCTAGGATTACAGATGTTATCCTGAAAGATCACCAGATGCCCGATAGAAGTGGTTTTAATACATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGCCAGCCTCGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGCCGAGGCGGCCTTTCTaGACCTCTAGCTCCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RLPASTLWLCPRKHKNDRPRRPF*TSSSSA Trigger: TGCGGAGGAGCTAGAGGTGCAGAAAGGCCGCCTCGG...CCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGAGGCTGGCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCCCGACCAACGAACCCGAACTGATTGTGCAAGAGCAGGGTGGTTCGGCAGAAGCCAGTTCACTTTaGCCCAAACTCTCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VCPTNEPELIVQEQGGSAEASSL*PKLSSL Trigger: CAGGCTGGAGAGTTTGGGTCAAAGTGAACTGGCTTC...TGCCGAACCACCCTGCTCTTGCACAATCAGTTCGGGTTCGTTGGTCGGGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| 3UTR CAA 72 bp | GTAACAGCCAGCCGTGCTGCAGTCAGAGTGATGGACTaGTTCACCCGACATCACACAGCACTGGCCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VTASRAAVRVMD*FTRHHTALASS Trigger: GCTACTGGCCAGTGCTGTGTGATGTCGGGTGAACAAGTCCATCACTCTGACTGCAGCACGGCTGGCTGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | GGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGCACGGGCACACCCTGGGAGACTTGTaGGTGTATTCAGCAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: GLSEVTGCLDTLDTVHGHTLGDL*VYSANF Trigger: AAAATTTGCTGAATACACTCACAAGTCTCCCAGGGT...GTGCCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGAATGGCTCTTCCTGGCTaGGGCCGAGGCGGCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGMALPG*GRGGLS Trigger: AGAAAGGCCGCCTCGGCCTCAGCCAGGAAGAGCCAT...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR CCA 90 bp | GGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGCACGGGCACCTTGAGCATAAACGCTaGCATCAACCAGAAGCTATT | + |
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Preference number: 4 (lower is better) Translates to: GLSEVTGCLDTLDTVHGHLEHKR*HQPEAI Trigger: AATAGCTTCTGGTTGATGCCAGCGTTTATGCTCAAG...GTGCCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCATACTAAGGGCCTGTACATTTCTTCCTTaGCTTCTGTTGACAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: CSGCIPCLQEARYTILRACTFLP*LLLTAH Trigger: GTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACA...GGCCCTTAGTATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGCACGGGGATGCCCCAAACAGATaGACTTTATCCAGTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TGLSEVTGCLDTLDTVHGDAPNR*TLSSCK Trigger: CTTACAACTGGATAAAGTTCATCTGTTTGGGGCATC...CCCGTGCACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR GCA 90 bp | ACGGGCACTGGGCTATCTGAGGTTACAGGCTGCCTGGACACTCTTGACACTGTGAAAGCCTCCCAAAGATaGCCCAAACAGATGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: TGTGLSEVTGCLDTLDTVKASQR*PKQMNF Trigger: AAAGTTCATCTGTTTGGGGCATCTTTGGGAGGCTTT...CACAGTGTCAAGAGTGTCCAGGCAGCCTGTAACCTCAGATAGCCCAGTGCCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR GCA 90 bp | TCTTGCTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCATACTAAGGATAAAGATTGACCTCTaGACTCCTGCACAGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SCSGCIPCLQEARYTILRIKIDL*TPAQVG Trigger: CCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTAT...CCTTAGTATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| 3UTR CAA 72 bp | CACACTGGTTTAGAAGAGCTGACGCCTGTCATGAGATaGACAATCAGTCCGACTTCCAGAAGGGTGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: HTGLEELTPVMR*TISPTSRRVRT Trigger: GGTCCTCACCCTTCTGGAAGTCGGACTGATTGTCAATCTCATGACAGGCGTCAGCTCTTCTAAACCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCCCGACCAACGAACCCGAACTGATTGTGCAAGAGCAGGGTGGTTCGGCATATTCAGCAAATTTTTaGGCCAAAAAGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: VCPTNEPELIVQEQGGSAYSANF*AKKPPK Trigger: TTTGGGAGGCTTTTTGGCTCAAAAATTTGCTGAATA...TGCCGAACCACCCTGCTCTTGCACAATCAGTTCGGGTTCGTTGGTCGGGCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGCATTCCTGCACATAAAGATTaGCCTCTGCACTCCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: FLRPGVFHLDVASCSGCIPAHKD*PLHSCT Trigger: TGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGG...AATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGCATTCCCAAAGCCTCCCAAAGATaGCCCAAACAGATGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: LRPGVFHLDVASCSGCIPKASQR*PKQMNF Trigger: AAAGTTCATCTGTTTGGGGCATCTTTGGGAGGCTTT...GGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| CDS-3UTR CCA 90 bp | TCTTGCTCTGGCTGCATTCCCTGTCTCCAGGAGGCAAGGTACACCATACTAAGGAAAGCCAGAATCTGCTaGAAAAACACATCTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SCSGCIPCLQEARYTILRKARIC*KNTSAV Trigger: AACTGCAGATGTGTTTTTCCAGCAGATTCTGGCTTT...CCTTAGTATGGTGTACCTTGCCTCCTGGAGACAGGGAATGCAGCCAGAGCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCTCGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTGCTCCTTTGCAGTCCATGTTTaGTTGAAGATAGACGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PASTLWLCPRKHKNDRCSFAVHV*LKIDVS Trigger: TGACACGTCTATCTTCAACCAAACATGGACTGCAAA...GGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGAGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR CCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGACGATGGCAGCGTACTTaGTTCCATGGAACTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGRWQRT*FHGTAA Trigger: TGCTGCAGTTCCATGGAACCAAGTACGCTGCCATCG...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
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| CDS-3UTR TCA 90 bp | AATCACATCAAGAAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGGAAGCCAGTTCACTTTaGCCCAAACTCTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHIKKSFLRPGVFHLDVAEASSL*PKLSSL Trigger: CAGGCTGGAGAGTTTGGGTCAAAGTGAACTGGCTTC...CGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGACTTCTTGATGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR GCA 90 bp | ATATATCTGTGTATGTGTGGGCAGATGCCAGAGAATGGATGCCCTGCAGCTAGTTTGGTTCCATGGAACTaGAGCAGATGTATCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYLCMCGQMPENGCPAASLVPWN*SRCICT Trigger: TGTGCAGATACATCTGCTGCAGTTCCATGGAACCAA...ACTAGCTGCAGGGCATCCATTCTCTGGCATCTGCCCACACATACACAGATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCGTCCCGGATCTTATGTaGCTCCACATAGGAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEVISEAWSIPFRCGVLLVPDLM*LHIGIL Trigger: CAGAATTCCTATGTGGAGCCACATAAGATCCGGGAC...GAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGACTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGCATTGATGCCCCAAACAGATaGACTTTATCCAGTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPGVFHLDVASCSGCIDAPNR*TLSSCK Trigger: CTTACAACTGGATAAAGTTCATCTGTTTGGGGCATC...AATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGATCTGCACATAAAGATTaGCCTCTGCACTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGSAHKD*PLHSCT Trigger: TGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGA...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR GCA 90 bp | CGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTGCTCCTCTTCTAGTCAAAGCCAGAATCTaGTGGAAAAACACATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPSGYAQESIKMTGAPLLVKARI*WKNTSA Trigger: TGCAGATGTGTTTTTCCAGCAGATTCTGGCTTTGAC...TAGAAGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGGTCAAAGCCAGAATCTaGTGGAAAAACACATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVISEAWSIPFRCGVLLWVKARI*WKNTSA Trigger: TGCAGATGTGTTTTTCCAGCAGATTCTGGCTTTGAC...CCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGAATAAAGATTGACCTCTaGACTCCTGCACAGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGIKIDL*TPAQVG Trigger: CCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTAT...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTGCTCCAAACCAATTATAATCTaGAGAGACTTTGATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PASTLWLCPRKHKNDRCSKPIII*RDFDLS Trigger: GGAGAGATCAAAGTCTCTCCAGATTATAATTGGTTT...GGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCGAGGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTGCAGCAGTTATAGAAAGCAGGAAAAGAGAGAACGCCACATGATCCCAATGGTCCCAATAAACTaGATACTGCAAAGCTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGCSSYRKQEKRERHMIPMVPIN*ILQSYN Trigger: GTTATAGCTTTGCAGTATCCAGTTTATTGGGACCAT...TGGGATCATGTGGCGTTCTCTCTTTTCCTGCTTTCTATAACTGCTGCACCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGATGTACATTTCTTCCTTaGCTTCTGTTGACAGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGCTFLP*LLLTAH Trigger: GTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACA...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACTCATCTCCCCAGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGAAAAGCCAGAATCTGCTaGAAAAACACATCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTHLPSVSSILSYLLKGKARIC*KNTSAV Trigger: AACTGCAGATGTGTTTTTCCAGCAGATTCTGGCTTT...TCCTTTCAAGAGATATGATAGGATACTTGAGACGCTGGGGAGATGAGTCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTCTCAAGTATCCTATCATATCTCTTGAAAGGACACATGGAAATGCTTTATGTCCCGGATCTTATGTaGCTCCACATAGGAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSILSYLLKGHMEMLYVPDLM*LHIGIL Trigger: CAGAATTCCTATGTGGAGCCACATAAGATCCGGGAC...ATAAAGCATTTCCATGTGTCCTTTCAAGAGATATGATAGGATACTTGAGACGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGTGGTGTTTTATTTTTGCCATTAGTACGTAATCACATCAAGAAGTCACTTGAGCATAAACGCTaGCATCAACCAGAAGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: GGGGVLFLPLVRNHIKKSLEHKR*HQPEAI Trigger: AATAGCTTCTGGTTGATGCCAGCGTTTATGCTCAAG...TGACTTCTTGATGTGATTACGTACTAATGGCAAAAATAAAACACCACCTCCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR TCA 90 bp | GTACGTAATCACATCAAGAAGTCATTTCTGAGGCCTGGAGTATTCCATTTAGATTATTCAGCAAATTTTTaGGCCAAAAAGCCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRNHIKKSFLRPGVFHLDYSANF*AKKPPK Trigger: TTTGGGAGGCTTTTTGGCTCAAAAATTTGCTGAATA...ATCTAAATGGAATACTCCAGGCCTCAGAAATGACTTCTTGATGTGATTACGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR GCA 90 bp | CTACATTGGATCAAGAGCTGGAGACAGTTTACTATGTTCTCCATATGTATTAAACAACCAGAAGCTATTTaGAGTCCATGTTTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHWIKSWRQFTMFSICIKQPEAI*SPCLVE Trigger: TTCAACCAAACATGGACTGCAAATAGCTTCTGGTTG...TTTAATACATATGGAGAACATAGTAAACTGTCTCCAGCTCTTGATCCAATGTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGTGGTGTTTTATTTTTGCCATTAGTACGTAATCACATCAAGAAGTCAAAACCAATTATAATCTaGAGAGACTTTGATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGVLFLPLVRNHIKKSKPIII*RDFDLS Trigger: GGAGAGATCAAAGTCTCTCCAGATTATAATTGGTTT...TGACTTCTTGATGTGATTACGTACTAATGGCAAAAATAAAACACCACCTCCTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGTGTTTTATTTTTGCCATTAGTACGTAATCACATCAAGAAGTCATTTTTTGCAGTCCATGTTTaGTTGAAGATAGACGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGVLFLPLVRNHIKKSFFAVHV*LKIDVS Trigger: TGACACGTCTATCTTCAACCAAACATGGACTGCAAA...AAATGACTTCTTGATGTGATTACGTACTAATGGCAAAAATAAAACACCACCTCC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS TCA 90 bp | GCACATGTTCTGGGGTCCACGCTGGACTCACCTGCACATAAAGATTaGCCTCTGCACTCCTGCACAGGTAGGGAAAATTGCCTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHVLGSTLDSPAHKD*PLHSCTGRENCLLS Trigger: AGACAGGAGGCAATTTTCCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGGTGAGTCCAGCGTGGACCCCAGAACATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS GCA 90 bp | TTCTGGGGTCCACGCTGGACTCACCTGCACATAAAGATTGACCTCTaGACTCCTGCACAGGTAGGGAAAATTGCCTCCTGTCTTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FWGPRWTHLHIKIDL*TPAQVGKIASCLKV Trigger: CACCTTAAGACAGGAGGCAATTTTCCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGGTGAGTCCAGCGTGGACCCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | GGTAACAGCCAGCCGTGCTGCAGTCAGAGTGATGGACTTGTTCACCCGACATCAGCAGTCCATGTTTGGTaGAAGATAGACGTGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GNSQPCCSQSDGLVHPTSAVHVW*KIDVSL Trigger: CAGTGACACGTCTATCTTCAACCAAACATGGACTGC...TGATGTCGGGTGAACAAGTCCATCACTCTGACTGCAGCACGGCTGGCTGTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGCATTCCCTGTCTCTTCCTTGGCTTCTGTaGACAGCGCACTCTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AWSIPFRCGVLLWLHSLSLPWLL*TAHSGQ Trigger: TTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAG...AGACAGGGAATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCCCGACCAACGAACCCGAACTGATTGTGCAAGAGCAGGGTGGTTCGGCAGCATTAGGGTACAGTTaGTACATTTCTTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VCPTNEPELIVQEQGGSAALGYS*YISSLA Trigger: AGCCAAGGAAGAAATGTACAAACTGTACCCTAATGC...TGCCGAACCACCCTGCTCTTGCACAATCAGTTCGGGTTCGTTGGTCGGGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTGCAGCAGTTATAGAAAGCAGGAAAAGAGAGAACGCCACATGATCCCATCGATGGCAGCGTACTaGGTTCCATGGAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGCSSYRKQEKRERHMIPSMAAY*VPWNCS Trigger: GCTGCAGTTCCATGGAACCAAGTACGCTGCCATCGA...TGGGATCATGTGGCGTTCTCTCTTTTCCTGCTTTCTATAACTGCTGCACCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CAA 90 bp | GTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGGTGTCACTGAAGGCATaGCACAGGATGAGGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VISEAWSIPFRCGVLLWLVSLKA*HRMREC Trigger: ACACTCCCTCATCCTGTGCAATGCCTTCAGTGACAC...CAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS TCA 90 bp | CCGCGCATTAGGGTACAGTTTGTACATTTCTTCCTTGGCTTCTGTTaGCAGCGCACTCTGGTCAAACACATCCATGATGGTGACGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRIRVQFVHFFLGFC*QRTLVKHIHDGDGD Trigger: ATCCCCGTCACCATCATGGATGTGTTTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACAAACTGTACCCTAATGCGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | TCACACTGGTTTAGAAGAGCTGACGCCTGTCATGAGATTGACAATCAGTCCGACGTGTCACTGAAGGCATaGCACAGGATGAGGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHWFRRADACHEIDNQSDVSLKA*HRMREC Trigger: ACACTCCCTCATCCTGTGCAATGCCTTCAGTGACAC...GTCGGACTGATTGTCAATCTCATGACAGGCGTCAGCTCTTCTAAACCAGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS-3UTR CAA 90 bp | ATATATCTGTGTATGTGTGGGCAGATGCCAGAGAATGGATGCCCTGCAGCTAGTCTTCCTTGGCTTCTGTaGACAGCGCACTCTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: IYLCMCGQMPENGCPAASLPWLL*TAHSGQ Trigger: TTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAG...ACTAGCTGCAGGGCATCCATTCTCTGGCATCTGCCCACACATACACAGATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS GCA 90 bp | TCCATGGAACTGCAGCAGATGTATCTGCACATAAAGATTGACCTCTaGACTCCTGCACAGGTAGGGAAAATTGCCTCCTGTCTTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMELQQMYLHIKIDL*TPAQVGKIASCLKV Trigger: CACCTTAAGACAGGAGGCAATTTTCCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGATACATCTGCTGCAGTTCCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS CCA 90 bp | TACAGTTTGTACATTTCTTCCTTGGCTTCTGTTGACAGCGCACTCTaGTCAAACACATCCATGATGGTGACGGGGATGTCCCGGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: YSLYISSLASVDSAL*SNTSMMVTGMSRIL Trigger: TAAGATCCGGGACATCCCCGTCACCATCATGGATGTGTTTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACAAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGCATTGCAGTCCATGTTTGGTaGAAGATAGACGTGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRPGVFHLDVASCSGCIAVHVW*KIDVSL Trigger: CAGTGACACGTCTATCTTCAACCAAACATGGACTGC...AATGCAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS CCA 90 bp | AGCATAAACGCTGGCATCAACCAGAAGCTATTTGCAGTCCATGTTTaGTTGAAGATAGACGTGTCACTGAAGGCATTGCACAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SINAGINQKLFAVHV*LKIDVSLKALHRMR Trigger: CCTCATCCTGTGCAATGCCTTCAGTGACACGTCTATCTTCAACCAAACATGGACTGCAAATAGCTTCTGGTTGATGCCAGCGTTTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | GTCATTTCTGAGGCCTGGAGTATTCCATTTAGATGTGGCGTCTTGCTCTGGCTGGCATTAGGGTACAGTTaGTACATTTCTTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VISEAWSIPFRCGVLLWLALGYS*YISSLA Trigger: AGCCAAGGAAGAAATGTACAAACTGTACCCTAATGC...CAGCCAGAGCAAGACGCCACATCTAAATGGAATACTCCAGGCCTCAGAAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS-3UTR CAA 90 bp | CGACCCTCTGGTTATGCCCAAGAAAGCATAAAAATGACCGGTGCTCCTCTTCTAATTTGCAGTCCATGTTaGGTTGAAGATAGACGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPSGYAQESIKMTGAPLLICSPC*VEDRRV Trigger: GACACGTCTATCTTCAACCAAACATGGACTGCAAAT...TAGAAGAGGAGCACCGGTCATTTTTATGCTTTCTTGGGCATAACCAGAGGGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS GCA 72 bp | TATGGCTCTTCCTGGCTGAGGCCGAGGCGGCCTTTCTaGACCTCTAGCTCCTCCGCACTGACCACTGACGGA | + |
|
Preference number: 6 (lower is better) Translates to: YGSSWLRPRRPF*TSSSSALTTDG Trigger: TCCGTCAGTGGTCAGTGCGGAGGAGCTAGAGGTGCAGAAAGGCCGCCTCGGCCTCAGCCAGGAAGAGCCATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS TCA 72 bp | CGAGGCGGCCTTTCTGCACCTCTAGCTCCTCCGCACTaGCCACTGACGGATCGATGGCAGCGTACTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGGLSAPLAPPH*PLTDRWQRTWF Trigger: GAACCAAGTACGCTGCCATCGATCCGTCAGTGGTCAGTGCGGAGGAGCTAGAGGTGCAGAAAGGCCGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS TCA 72 bp | CTGGGGTCCACGCTGGACTCACCTGCACATAAAGATTaGCCTCTGCACTCCTGCACAGGTAGGGAAAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTLDSPAHKD*PLHSCTGRENC Trigger: GCAATTTTCCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGGTGAGTCCAGCGTGGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS CCA 72 bp | GGGGTCTCTAAAGCGCACATGTTCTGGGGTCCACGCTaGACTCACCTGCACATAAAGATTGACCTCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: GVSKAHMFWGPR*THLHIKIDLCT Trigger: AGTGCAGAGGTCAATCTTTATGTGCAGGTGAGTCCAGCGTGGACCCCAGAACATGTGCGCTTTAGAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213957.2 |
||
| CDS CAA 72 bp | TCCGCACTGACCACTGACGGATCGATGGCAGCGTACTaGGTTCCATGGAACTGCAGCAGATGTATCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SALTTDGSMAAY*VPWNCSRCICT Trigger: TGTGCAGATACATCTGCTGCAGTTCCATGGAACCAAGTACGCTGCCATCGATCCGTCAGTGGTCAGTGCGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS CAA 90 bp | AGGTGGGCTCTCCGCGCATTAGGGTACAGTTTGTACATTTCTTCCTaGGCTTCTGTTGACAGCGCACTCTGGTCAAACACATCCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: RWALRALGYSLYISS*ASVDSALWSNTSMM Trigger: CATCATGGATGTGTTTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACAAACTGTACCCTAATGCGCGGAGAGCCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS CCA 72 bp | TACATTTCTTCCTTGGCTTCTGTTGACAGCGCACTCTaGTCAAACACATCCATGATGGTGACGGGGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: YISSLASVDSAL*SNTSMMVTGMS Trigger: GGACATCCCCGTCACCATCATGGATGTGTTTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS CAA 72 bp | CATGTTTGGTTGAAGATAGACGTGTCACTGAAGGCATaGCACAGGATGAGGGAGTGTACCCTGGGAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: HVWLKIDVSLKA*HRMRECTLGDL Trigger: CAAGTCTCCCAGGGTACACTCCCTCATCCTGTGCAATGCCTTCAGTGACACGTCTATCTTCAACCAAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS CAA 90 bp | ATAAACGCTGGCATCAACCAGAAGCTATTTGCAGTCCATGTTTGGTaGAAGATAGACGTGTCACTGAAGGCATTGCACAGGATGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: INAGINQKLFAVHVW*KIDVSLKALHRMRE Trigger: CTCCCTCATCCTGTGCAATGCCTTCAGTGACACGTCTATCTTCAACCAAACATGGACTGCAAATAGCTTCTGGTTGATGCCAGCGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS CAA 90 bp | GAGCATAAACGCTGGCATCAACCAGAAGCTATTTGCAGTCCATGTTaGGTTGAAGATAGACGTGTCACTGAAGGCATTGCACAGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: EHKRWHQPEAICSPC*VEDRRVTEGIAQDE Trigger: CTCATCCTGTGCAATGCCTTCAGTGACACGTCTATCTTCAACCAAACATGGACTGCAAATAGCTTCTGGTTGATGCCAGCGTTTATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
||
| CDS TCA 72 bp | CATGGAACTGCAGCAGATGTATCTGCACATAAAGATTaGCCTCTGCACTCCTGCACAGGTAGGGAAAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: HGTAADVSAHKD*PLHSCTGRENC Trigger: GCAATTTTCCCTACCTGTGCAGGAGTGCAGAGGTCAATCTTTATGTGCAGATACATCTGCTGCAGTTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034955.8 |
||
| CDS CCA 72 bp | GCTGGCATCAACCAGAAGCTATTTGCAGTCCATGTTTaGTTGAAGATAGACGTGTCACTGAAGGCATTGCAC | + |
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Preference number: 6 (lower is better) Translates to: AGINQKLFAVHV*LKIDVSLKALH Trigger: GTGCAATGCCTTCAGTGACACGTCTATCTTCAACCAAACATGGACTGCAAATAGCTTCTGGTTGATGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
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| CDS TCA 72 bp | AGGGTACAGTTTGTACATTTCTTCCTTGGCTTCTGTTaGCAGCGCACTCTGGTCAAACACATCCATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RVQFVHFFLGFC*QRTLVKHIHDG Trigger: ACCATCATGGATGTGTTTGACCAGAGTGCGCTGTCAACAGAAGCCAAGGAAGAAATGTACAAACTGTACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034955.8 ENSMUST00000213957.2 |
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