Pregenerated sensors for SPG20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036580Ensembl transcript IDs: ENSMUST00000044116.14, ENSMUST00000107971.9, ENSMUST00000117341.2, ENSMUST00000118118.8, ENSMUST00000146109.2, ENSMUST00000149767.2
Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAAGACTGTCTGTGGGGTCTCCTCTTCTCCATGGGCCTGCAGTaGAATGCCTTTGACATCCTGTGCTTCGTGCTGCCCTGCCGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TEDCLWGLLFSMGLQ*NAFDILCFVLPCRV Trigger: GACACGGCAGGGCAGCACGAAGCACAGGATGTCAAAGGCATTTCACTGCAGGCCCATGGAGAAGAGGAGACCCCACAGACAGTCTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR TCA 90 bp | CACCTGCCAAGGGGACGAGGTCTGACAGCAACCAGCAGGGCACAGTaGAGTCACCTCTCTCCAGAGACCTCAAATCCAAAGTACACAGAA | + |
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Preference number: 1 (lower is better) Translates to: HLPRGRGLTATSRAQ*SHLSPETSNPKYTE Trigger: TTCTGTGTACTTTGGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTCAGACCTCGTCCCCTTGGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR CCA 90 bp | GCTTCTGGGGAACAAGATGTCAGTTTTCTTGAGGAGCATGGTCCCTaGAGGATGAACCAACCTGCAGTGGATGGTCCCACACCCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: ASGEQDVSFLEEHGP*RMNQPAVDGPTPMS Trigger: GCTCATGGGTGTGGGACCATCCACTGCAGGTTGGTTCATCCTCCAGGGACCATGCTCCTCAAGAAAACTGACATCTTGTTCCCCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CCA 90 bp | GAGGATGGGGAGTGGAATGGCCAAGAGTCAGAAGTCCAGGAGGCGTaGATAAACTCACATCTTCTGGGCATGACAGGACCCTTACACACA | + |
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Preference number: 1 (lower is better) Translates to: EDGEWNGQESEVQEA*INSHLLGMTGPLHT Trigger: TGTGTGTAAGGGTCCTGTCATGCCCAGAAGATGTGAGTTTATCCACGCCTCCTGGACTTCTGACTCTTGGCCATTCCACTCCCCATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CCA 90 bp | TCTACCTCCATAAAGCCCAGGGAACATGGAGGATGGGGAGTGGAATaGCCAAGAGTCAGAAGTCCAGGAGGCGTGGATAAACTCACATCT | + |
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Preference number: 1 (lower is better) Translates to: STSIKPREHGGWGVE*PRVRSPGGVDKLTS Trigger: AGATGTGAGTTTATCCACGCCTCCTGGACTTCTGACTCTTGGCCATTCCACTCCCCATCCTCCATGTTCCCTGGGCTTTATGGAGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR TCA 90 bp | CTATTGACAGTTGATGGCTTCTGGGGAACAAGATGTCAGTTTTCTTaGGGAGCATGGTCCCTGGAGGATGAACCAACCTGCAGTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: LLTVDGFWGTRCQFS*GAWSLEDEPTCSGW Trigger: CCATCCACTGCAGGTTGGTTCATCCTCCAGGGACCATGCTCCTCAAGAAAACTGACATCTTGTTCCCCAGAAGCCATCAACTGTCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CCA 90 bp | ATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATaGAGGATGGGGAGTGGAATGGCCAAGAGTCAGAAGTCCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: IVQHSLVYLHKAQGT*RMGSGMAKSQKSRR Trigger: CCTCCTGGACTTCTGACTCTTGGCCATTCCACTCCCCATCCTCCATGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CCA 90 bp | ATTTGTTTCTCAAAAGTAAGTGGAACAAGGCATATGGGGCCACTCTaGCCTGGTTTAAACTTTACTTTGTGTAGCTTGTTGGTGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: ICFSKVSGTRHMGPL*PGLNFTLCSLLVTQ Trigger: CTGAGTCACCAACAAGCTACACAAAGTAAAGTTTAAACCAGGCCAGAGTGGCCCCATATGCCTTGTTCCACTTACTTTTGAGAAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR CCA 90 bp | ATGTTAGAAGCCAGATGTAAGAACACTGATTATTTTCCTTGTAAGTaGATACATGCCCCAAACTTCCAACAGTCACTCTGTAGAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: MLEARCKNTDYFPCK*IHAPNFQQSLCRNE Trigger: TTCATTTCTACAGAGTGACTGTTGGAAGTTTGGGGCATGTATCCACTTACAAGGAAAATAATCAGTGTTCTTACATCTGGCTTCTAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCAGGGAGGTGTGGACCTaGGAGGAGTTGGGGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAREVWT*EELGSV Trigger: CACACTCCCCAACTCCTCCCAGGTCCACACCTCCCT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATGGAAGAGGGAGGTGTaGACCTGGGAGGAGTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLWKREV*TWEELG Trigger: CCCCAACTCCTCCCAGGTCCACACCTCCCTCTTCCA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGAGGGAGGTGTGGACCTaGGAGGAGTTGGGGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGREVWT*EELGSV Trigger: CACACTCCCCAACTCCTCCCAGGTCCACACCTCCCT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGTCAAGGCACTTTCATaGCCAAGCTCATCCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAVKALS*PSSSLL Trigger: CAACAGGGATGAGCTTGGTCATGAAAGTGCCTTGAC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCAGATGTCAGTTTTCTTaGGGAGCATGGTCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QTSQHPSLQWAGSHKPPARCQFS*GAWSLE Trigger: CTCCAGGGACCATGCTCCTCAAGAAAACTGACATCT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAACGCACAAAAGAACATaGGGTTGGAAGAGGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLTHKRT*GWKREV Trigger: CACCTCCCTCTTCCAACCTCATGTTCTTTTGTGCGT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCACACCTGGCTCTGAGATaGACACAGGCTTTAAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSHLALR*TQALSH Trigger: GTGACTTAAAGCCTGTGTCCATCTCAGAGCCAGGTG...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATATTTTCCTTGTAAGTaGATACATGCCCCAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLYFPCK*IHAPNF Trigger: GAAGTTTGGGGCATGTATCCACTTACAAGGAAAATA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGACCTCAAATCCAAAGTACACAGAAAACATACCGCCAACTGTCAGCTACCTAGAAGGAAGCACATaGCTCTCAGCGGTGGGGCCG | + |
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Preference number: 2 (lower is better) Translates to: PETSNPKYTENIPPTVSYLEGST*LSAVGP Trigger: CGGCCCCACCGCTGAGAGTCATGTGCTTCCTTCTAG...GTAGCTGACAGTTGGCGGTATGTTTTCTGTGTACTTTGGATTTGAGGTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAGGGAACATGGAGGATaGGGAGTGGAATGGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFREHGG*GVEWPR Trigger: TCTTGGCCATTCCACTCCCCATCCTCCATGTTCCCT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAAAGCCCAGGGAACATaGAGGATGGGGAGTGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFKAQGT*RMGSGM Trigger: CATTCCACTCCCCATCCTCCATGTTCCCTGGGCTTT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCGTCAAGGCACTTTCATaGCCAAGCTCATCCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFVKALS*PSSSLL Trigger: CAACAGGGATGAGCTTGGTCATGAAAGTGCCTTGAC...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAGATGTCAGTTTTCTTaGGGAGCATGGTCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFRCQFS*GAWSLE Trigger: CTCCAGGGACCATGCTCCTCAAGAAAACTGACATCT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCATGGAGGATGGGGAGTaGAATGGCCAAGAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFMEDGE*NGQESE Trigger: TTCTGACTCTTGGCCATTCCACTCCCCATCCTCCAT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTCCTTCCAGTCAGATCTaGGAAGCCTCCTGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: KAKILWTLIKSQALFPLLPSSQI*EASWDR Trigger: TCTGTCCCAGGAGGCTTCTCAGATCTGACTGGAAGG...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGTCAACACCCCAGCCTaGAGTGGGCAGGGTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTVNTPA*SGQGLT Trigger: TGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGAC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATGGAAGAGGGAGGTGTaGACCTGGGAGGAGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTWKREV*TWEELG Trigger: CCCCAACTCCTCCCAGGTCCACACCTCCCTCTTCCA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGTGGAACAAGGCATATGGGGCCACTCTGGCCTGGTTTAAACTTTACTTTGCAGTGAAATGCCTTTaGCATCCTGTGCTTCGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SKWNKAYGATLAWFKLYFAVKCL*HPVLRA Trigger: AGCACGAAGCACAGGATGTCAAAGGCATTTCACTGC...AAAGTAAAGTTTAAACCAGGCCAGAGTGGCCCCATATGCCTTGTTCCACTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCACAGTTGATGGCTTCTaGGGAACAAGATGTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFTVDGF*GTRCQF Trigger: AAACTGACATCTTGTTCCCCAGAAGCCATCAACTGT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCGCAGATATGGAAAAGTaGTTTCTTAGTGCCAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: FHILPCGMDRLLPSLLAFADMEK*FLSASN Trigger: GTTACTGGCACTAAGAAATCACTTTTCCATATCTGC...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGGATGGGGAGTGGAATaGCCAAGAGTCAGAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTGWGVE*PRVRSP Trigger: TGGACTTCTGACTCTTGGCCATTCCACTCCCCATCC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAATCGCAAGGCCATTTTaGTTTCCTAGTAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTIARPF*FPSRQK Trigger: CTTCTGCCTACTAGGAAACCAAAATGGCCTTGCGAT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAACAGTTGATGGCTTCTaGGGAACAAGATGTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTTVDGF*GTRCQF Trigger: AAACTGACATCTTGTTCCCCAGAAGCCATCAACTGT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATATTTTCCTTGTAAGTaGATACATGCCCCAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTYFPCK*IHAPNF Trigger: GAAGTTTGGGGCATGTATCCACTTACAAGGAAAATA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR GCA 72 bp | CACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTaGAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: HFHRIKPVNTPA*SGQGLTSPRPS Trigger: GCTAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CCA 72 bp | GCATGGTCCCTGGAGGATGAACCAACCTGCAGTGGATaGTCCCACACCCATGAGCATACGGGCAGCACACAC | + |
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Preference number: 3 (lower is better) Translates to: AWSLEDEPTCSG*SHTHEHTGSTH Trigger: GTGTGTGCTGCCCGTATGCTCATGGGTGTGGGACCATCCACTGCAGGTTGGTTCATCCTCCAGGGACCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAGCACAGCTTCCTACTTaGCTTTCTGAAGGCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLAQLPT*LSEGST Trigger: TGTGCTGCCTTCAGAAAGCAAAGTAGGAAGCTGTGC...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTACTGCTGAAAATCCTGTaGGGCATCTCAAAAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLLLKIL*GISKEP Trigger: TGGCTCTTTTGAGATGCCCAACAGGATTTTCAGCAG...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTACGAATAAGAGGAACATaGCAGAGCGTCAAGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLRIRGT*QSVKAL Trigger: AAGTGCCTTGACGCTCTGCAATGTTCCTCTTATTCG...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAAAGATGTCAGTTTTCTaGAGGAGCATGGTCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLKMSVF*RSMVPG Trigger: TCCAGGGACCATGCTCCTCAAGAAAACTGACATCTT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR TCA 72 bp | GTCACAGGCCCTCTTTCCTCTCCTTTGTGGAATGTCTaGCTCCCCTGTGCTGTCTTCTGGCTGAGGCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: VTGPLSSPLWNV*LPCAVFWLRPP Trigger: AGGGGGCCTCAGCCAGAAGACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCTGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR GCA 72 bp | GCCTGCAGTGAAATGCCTTTGACATCCTGTGCTTCGTaGTGCCCTGCCGTGTCTCACCAGCACACGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: ACSEMPLTSCAS*CPAVSHQHTAI Trigger: GATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAAGCACAGGATGTCAAAGGCATTTCACTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR CCA 72 bp | AGAAGCCTCCTGGGACAGAGGCACCTGGCTCTGAGATaGACACAGGCTTTAAGTCACCTGCCAAGGGGACGA | + |
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Preference number: 3 (lower is better) Translates to: RSLLGQRHLALR*TQALSHLPRGR Trigger: TCGTCCCCTTGGCAGGTGACTTAAAGCCTGTGTCCATCTCAGAGCCAGGTGCCTCTGTCCCAGGAGGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR TCA 72 bp | TGTCTGTGGGGTCTCCTCTTCTCCATGGGCCTGCAGTaGAATGCCTTTGACATCCTGTGCTTCGTGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: CLWGLLFSMGLQ*NAFDILCFVLP Trigger: GGGCAGCACGAAGCACAGGATGTCAAAGGCATTTCACTGCAGGCCCATGGAGAAGAGGAGACCCCACAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGAAGATGTCAGTTTTCTaGAGGAGCATGGTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGKMSVF*RSMVPG Trigger: TCCAGGGACCATGCTCCTCAAGAAAACTGACATCTT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR TCA 72 bp | AGGGGACGAGGTCTGACAGCAACCAGCAGGGCACAGTaGAGTCACCTCTCTCCAGAGACCTCAAATCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGRGLTATSRAQ*SHLSPETSNPK Trigger: CTTTGGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTCAGACCTCGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| 3UTR GCA 72 bp | TGCAGTGAAATGCCTTTGACATCCTGTGCTTCGTGCTaGCCTGCCGTGTCTCACCAGCACACGGCAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSEMPLTSCASC*PAVSHQHTAIS Trigger: AGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAAGCACAGGATGTCAAAGGCATTTCACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| 3UTR CCA 72 bp | TGGGGCTCCCCACCAAGGGTTCCATATTCTTCCCTGTaGTATGGACAGGCTCCTCCCATCACTTCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WGSPPRVPYSSL*YGQAPPITSGF Trigger: AAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAACCCTTGGTGGGGAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | GAGTGGAATGGCCAAGAGTCAGAAGTCCAGGAGGCGTaGATAAACTCACATCTTCTGGGCATGACAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: EWNGQESEVQEA*INSHLLGMTGP Trigger: GGGTCCTGTCATGCCCAGAAGATGTGAGTTTATCCACGCCTCCTGGACTTCTGACTCTTGGCCATTCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | CTCTGTAGAAATGAACAGACAGAAGACGCTGTTCTGTaGAGAATCTCCGTCCGCTCACACCCTCCGTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCRNEQTEDAVL*RISVRSHPPSA Trigger: AGCAGACGGAGGGTGTGAGCGGACGGAGATTCTCCACAGAACAGCGTCTTCTGTCTGTTCATTTCTACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | ATAAAGCCCAGGGAACATGGAGGATGGGGAGTGGAATaGCCAAGAGTCAGAAGTCCAGGAGGCGTGGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKPREHGGWGVE*PRVRSPGGVDK Trigger: TTTATCCACGCCTCCTGGACTTCTGACTCTTGGCCATTCCACTCCCCATCCTCCATGTTCCCTGGGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | CTCCCCACCAAGGGTTCCATATTCTTCCCTGTGGTATaGACAGGCTCCTCCCATCACTTCTGGCTTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LPTKGSIFFPVV*TGSSHHFWLSV Trigger: TACTGAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAACCCTTGGTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR TCA 72 bp | GTTGATGGCTTCTGGGGAACAAGATGTCAGTTTTCTTaGGGAGCATGGTCCCTGGAGGATGAACCAACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VDGFWGTRCQFS*GAWSLEDEPTC Trigger: GCAGGTTGGTTCATCCTCCAGGGACCATGCTCCTCAAGAAAACTGACATCTTGTTCCCCAGAAGCCATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | GAACAAGATGTCAGTTTTCTTGAGGAGCATGGTCCCTaGAGGATGAACCAACCTGCAGTGGATGGTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: EQDVSFLEEHGP*RMNQPAVDGPT Trigger: TGTGGGACCATCCACTGCAGGTTGGTTCATCCTCCAGGGACCATGCTCCTCAAGAAAACTGACATCTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | CATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATaGAGGATGGGGAGTGGAATGGCCAAGAGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSLVYLHKAQGT*RMGSGMAKSQK Trigger: CTTCTGACTCTTGGCCATTCCACTCCCCATCCTCCATGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAGCACAGCTTCCTACTTaGCTTTCTGAAGGCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VGHLKRATISAKGRRQSTAQLPT*LSEGST Trigger: TGTGCTGCCTTCAGAAAGCAAAGTAGGAAGCTGTGC...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCTGCTGAAAATCCTGTaGGGCATCTCAAAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHILPCGMDRLLPSLLAFLLKIL*GISKEP Trigger: TGGCTCTTTTGAGATGCCCAACAGGATTTTCAGCAG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CCA 72 bp | AAATGGGCAAATGTCTGTCCTGTATTCTGCAAAAGTTaGGGCTCCCCACCAAGGGTTCCATATTCTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KWANVCPVFCKS*GSPPRVPYSSL Trigger: CAGGGAAGAATATGGAACCCTTGGTGGGGAGCCCCAACTTTTGCAGAATACAGGACAGACATTTGCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTACACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLHAGPV*PGSAAA Trigger: CGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTG...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGCCCTCAGCAGCCTGTaGGCTGTAGGCTGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAALSSL*AVGWWR Trigger: GCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCACACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSHAGPV*PGSAAA Trigger: CGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTG...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR TCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTACAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLQPGAG*LWLLLR Trigger: CCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTG...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPATPGDS*AHLHWL Trigger: AAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGGCTGCTCCTCCGGTTaGCTGCTTCGCTATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAGCSSG*LLRYVE Trigger: CTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAGCCCTCAGCAGCCTGTaGGCTGTAGGCTGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSALSSL*AVGWWR Trigger: GCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGC...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPANQSHT*RNPGGR Trigger: CCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLTPGDS*AHLHWL Trigger: AAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTCCCTTCTGTGCTTGTaGCTCCTCCCTGACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPASLLCL*LLPDSP Trigger: GGGAGAGTCAGGGAGGAGCCACAAGCACAGAAGGGA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCCTCTTCTCCCTTCTGTaGTTGTGGCTCCTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPALFSLL*LWLLPD Trigger: GTCAGGGAGGAGCCACAAGCACAGAAGGGAGAAGAG...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCATTTTCTGTTGCATCTaGCTGGCAGCCTCCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAIFCCI*LAASHA Trigger: TGCGTGGGAGGCTGCCAGGCAGATGCAACAGAAAAT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTACTCTTCTCCCTTCTGTaGTTGTGGCTCCTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLLFSLL*LWLLPD Trigger: GTCAGGGAGGAGCCACAAGCACAGAAGGGAGAAGAG...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCCTATTCCAGTTGGCCTaGAGCCGAAGGTCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPALFQLA*SRRSDI Trigger: GATGTCTGACCTTCGGCTCCAGGCCAACTGGAATAG...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFHAGPV*PGSAAA Trigger: CGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAATTTTCTGTTGCATCTaGCTGGCAGCCTCCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLIFCCI*LAASHA Trigger: TGCGTGGGAGGCTGCCAGGCAGATGCAACAGAAAAT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTCCTTCATTTTCTGTTaGATCTGCCTGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPASFIFC*ICLAAS Trigger: GGAGGCTGCCAGGCAGATGCAACAGAAAATGAAGGA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATGTAGGCTCCCACAGTaGACTTCAGAACTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLCRLPQ*TSELVT Trigger: GGTCACCAGTTCTGAAGTGCACTGTGGGAGCCTACA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGGCTGCTCCTCCGGTTaGCTGCTTCGCTATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGGCSSG*LLRYVE Trigger: CTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPATSLLP*FLTCGA Trigger: TGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGNQSHT*RNPGGR Trigger: CCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGCCGTCAACCAGGAGCTaGCTGACTTTGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGPSTRS*LTLAAP Trigger: AGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGG...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTGTGTCCCGTCTGCTTaGCAGTTTTCTTCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPACVPSA*QFSSPW Trigger: CCATGGTGAAGAAAACTGCCAAGCAGACGGGACACA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATTCAGAGGGGTGACTTaGTCTCCCAGGGATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLFRGVT*SPRDLE Trigger: TTCCAAATCCCTGGGAGATCAAGTCACCCCTCTGAA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACACACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTHAGPV*PGSAAA Trigger: CGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTG...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGGCGGGCATCCTTGCTaGCTTGGTCTATTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGGGHPC*LGLLRN Trigger: GTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGCTTCTCCTGCGTTGTaGCCATACTTGTATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAASPAL*PYLYLT Trigger: TGTGAGATACAAGTATGGGCACAACGCAGGAGAAGC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCACTCTGGGTATAGCTTaGGCACATCCTGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPATLGIA*AHPEGH Trigger: ATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATGTGTCCCGTCTGCTTaGCAGTTTTCTTCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLCVPSA*QFSSPW Trigger: CCATGGTGAAGAAAACTGCCAAGCAGACGGGACACA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATTCTGGGAGCTCAGATaGAAGAACAACCCCTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLFWELR*KNNPYE Trigger: TTCGTAGGGGTTGTTCTTTCATCTGAGCTCCCAGAA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAAAGAACTTGACTGCCTaGCATCAGTGCCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLKNLTA*HQCQKL Trigger: AAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAGCACATTCCAACCCTTaGCAGACAGTTGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLAHSNP*QTVENP Trigger: AGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGC...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAGCTTCTCCTGCGTTGTaGCCATACTTGTATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLASPAL*PYLYLT Trigger: TGTGAGATACAAGTATGGGCACAACGCAGGAGAAGC...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTTCTCTTCCTCCACCTaGTTTCCTATGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAFSSST*FPMSLL Trigger: GAGAAGAGACATAGGAAAGCAGGTGGAGGAAGAGAA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAACTCTGGGTATAGCTTaGGCACATCCTGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLTLGIA*AHPEGH Trigger: ATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCGCCCTCAGCAGCCTGTaGGCTGTAGGCTGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFALSSL*AVGWWR Trigger: GCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGC...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTCTTCACCATGGCTTTaGTGCCGATGTTGTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPASSPWL*CRCCQY Trigger: ATATTGACAACATCGGCATCAAAGCCATGGTGAAGA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAATTTTCTGTTGCATCTaGCTGGCAGCCTCCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSIFCCI*LAASHA Trigger: TGCGTGGGAGGCTGCCAGGCAGATGCAACAGAAAAT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCCTTCATTTTCTGTTaGATCTGCCTGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGSFIFC*ICLAAS Trigger: GGAGGCTGCCAGGCAGATGCAACAGAAAATGAAGGA...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGTSLLP*FLTCGA Trigger: TGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAAACGATGCATTTAGCTaGACATTCCAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLNDAFS*TFQPLP Trigger: TGGCAAGGGTTGGAATGTGCAGCTAAATGCATCGTT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAATGTGTAGCTTCTCCTaGGTTGTGCCCATACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLMCSFS*VVPILV Trigger: TACAAGTATGGGCACAACGCAGGAGAAGCTACACAT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAGCCCTCAGCAGCCTGTaGGCTGTAGGCTGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRALSSL*AVGWWR Trigger: GCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGC...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSNQSHT*RNPGGR Trigger: CCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTT...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCACTTCTCTATTCCAGTTaGCCTGGAGCCGAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSLLYSS*PGAEGQ Trigger: CTGACCTTCGGCTCCAGGCCAACTGGAATAGAGAAG...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| 3UTR CAA 72 bp | GTCTCCTCTTCTCCATGGGCCTGCAGTGAAATGCCTTaGACATCCTGTGCTTCGTGCTGCCCTGCCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSSPWACSEMP*TSCASCCPAVS Trigger: AGACACGGCAGGGCAGCACGAAGCACAGGATGTCAAAGGCATTTCACTGCAGGCCCATGGAGAAGAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGCTTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTAAGAACTTGACTGCCTaGCATCAGTGCCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCASCCPAVSHQHTAISPKNLTA*HQCQKL Trigger: AAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTT...AGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAAGCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGCCTGAAGAACTTGACTaGCTGACATCAGTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGPEELD*LTSVPE Trigger: TTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGG...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCGGCGGGCATCCTTGCTaGCTTGGTCTATTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSGGHPC*LGLLRN Trigger: GTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCC...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGCACATTCCAACCCTTaGCAGACAGTTGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGAHSNP*QTVENP Trigger: AGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGCTTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTGCACATTCCAACCCTTaGCAGACAGTTGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCASCCPAVSHQHTAISPAHSNP*QTVENP Trigger: AGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGC...AGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAAGCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGCTTCTCCTGCGTTGTaGCCATACTTGTATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGASPAL*PYLYLT Trigger: TGTGAGATACAAGTATGGGCACAACGCAGGAGAAGC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACACTGTGGGCTGTAGGCTaGTGGCGCTTCGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTLWAVG*WRFGRA Trigger: TGCCCTGCCGAAGCGCCACCAGCCTACAGCCCACAG...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGCATCCTTGCTGCCTTaGTCTATTGAGGAACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGASLLP*SIEEPE Trigger: TTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTTAGAAGCACCTTTCTaGATTGCTTTGCCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSQHPSLQWAGSHKPPALEAPF*IALPVN Trigger: ATTTACTGGCAAAGCAATTCAGAAAGGTGCTTCTAA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACACAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTQPGAG*LWLLLR Trigger: CCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTG...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAAGCACCTTTCTGAATTaGTTTGCCAGTAAATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLSTFLN*FASKFS Trigger: GCTGAATTTACTGGCAAAGCAATTCAGAAAGGTGCT...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTTCTCTTCCTCCACCTaGTTTCCTATGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGFSSST*FPMSLL Trigger: GAGAAGAGACATAGGAAAGCAGGTGGAGGAAGAGAA...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAACTCTGGGTATAGCTTaGGCACATCCTGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSTLGIA*AHPEGH Trigger: ATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGACCTCAAATCCAAAGTACACAGAAAACATACCGCCAACTGTCAGCTACCAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PETSNPKYTENIPPTVSYQPGAG*LWLLLR Trigger: CCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTG...GTAGCTGACAGTTGGCGGTATGTTTTCTGTGTACTTTGGATTTGAGGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFNQSHT*RNPGGR Trigger: CCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRTPGDS*AHLHWL Trigger: AAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCTTCTGGGAGCTCAGATaGAAGAACAACCCCTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSFWELR*KNNPYE Trigger: TTCGTAGGGGTTGTTCTTTCATCTGAGCTCCCAGAA...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGATCTCCCAGGGATTTaGAATTCATCTTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGDLPGI*NSSSSL Trigger: TAGAGAAGAAGATGAATTCCAAATCCCTGGGAGATC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACACCGTCAACCAGGAGCTaGCTGACTTTGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTPSTRS*LTLAAP Trigger: AGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGG...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATCCCTTCTGTGCTTGTaGCTCCTCCCTGACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTSLLCL*LLPDSP Trigger: GGGAGAGTCAGGGAGGAGCCACAAGCACAGAAGGGA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGCTTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTTAGAAGCACCTTTCTaGATTGCTTTGCCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCASCCPAVSHQHTAISPLEAPF*IALPVN Trigger: ATTTACTGGCAAAGCAATTCAGAAAGGTGCTTCTAA...AGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAAGCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTTAGAAGCACCTTTCTaGATTGCTTTGCCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGLEAPF*IALPVN Trigger: ATTTACTGGCAAAGCAATTCAGAAAGGTGCTTCTAA...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTCTTTCCTCTCCTTTGTGGAATGTCTGACTCCCCTGTGCTGTCTTCTGCCCTTGCCAGACAGTTaGGAATCCTTGAACACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLSFVECLTPLCCLLPLPDS*ESLNTT Trigger: AGTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGG...CAGAAGACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCGTACTAACGGACTCCTaGTCTGGGGACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFVLTDS*SGDFLH Trigger: GTGCAAGAAGTCCCCAGAGCAGGAGTCCGTTAGTAC...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAAGCACCTTTCTGAATTaGTTTGCCAGTAAATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSSTFLN*FASKFS Trigger: GCTGAATTTACTGGCAAAGCAATTCAGAAAGGTGCT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCAACGATGCATTTAGCTaGACATTCCAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSNDAFS*TFQPLP Trigger: TGGCAAGGGTTGGAATGTGCAGCTAAATGCATCGTT...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSSLYSF*RHVVND Trigger: ATCGTTAACAACGTGTCTGCAGAAACTGTACAGACT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCTTCTCTATTCCAGTTaGCCTGGAGCCGAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFLLYSS*PGAEGQ Trigger: CTGACCTTCGGCTCCAGGCCAACTGGAATAGAGAAG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAGATCTCCCAGGGATTTaGAATTCATCTTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSDLPGI*NSSSSL Trigger: TAGAGAAGAAGATGAATTCCAAATCCCTGGGAGATC...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTCTTTCCTCTCCTTTGTGGAATGTCTGACTCCCCTGTGCTGTCTTCTGGCATCCTTGCTGCCTTaGTCTATTGAGGAACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLSFVECLTPLCCLLASLLP*SIEEPE Trigger: TTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGC...CAGAAGACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACCTCAAATCCAAAGTACACAGAAAACATACCGCCAACTGTCAGCTACCCGTCAACCAGGAGCTaGCTGACTTTGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PETSNPKYTENIPPTVSYPSTRS*LTLAAP Trigger: AGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGG...GTAGCTGACAGTTGGCGGTATGTTTTCTGTGTACTTTGGATTTGAGGTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSKGLLV*FLDDLN Trigger: ATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAGTACTAACGGACTCCTaGTCTGGGGACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTVLTDS*SGDFLH Trigger: GTGCAAGAAGTCCCCAGAGCAGGAGTCCGTTAGTAC...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAGTACTAACGGACTCCTaGTCTGGGGACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRVLTDS*SGDFLH Trigger: GTGCAAGAAGTCCCCAGAGCAGGAGTCCGTTAGTAC...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTGGAACAAGGCATATGGGGCCACTCTGGCCTGGTTTAAACTTTACTTTGGCTGCTCCTCCGGTTaGCTGCTTCGCTATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKWNKAYGATLAWFKLYFGCSSG*LLRYVE Trigger: CTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCC...AAAGTAAAGTTTAAACCAGGCCAGAGTGGCCCCATATGCCTTGTTCCACTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCCAGCAGCTTGTAACATaGTATCTGGAAACATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSQQLVT*YLETCR Trigger: CCTACATGTTTCCAGATACCATGTTACAAGCTGCTG...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACACTATTCCAGTTGGCCTaGAGCCGAAGGTCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTLFQLA*SRRSDI Trigger: GATGTCTGACCTTCGGCTCCAGGCCAACTGGAATAG...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACTTCTCTATTCCAGTTaGCCTGGAGCCGAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRLLYSS*PGAEGQ Trigger: CTGACCTTCGGCTCCAGGCCAACTGGAATAGAGAAG...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACACAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTQPGAG*LWLLLR Trigger: CCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTG...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCCCTTGCCAGACAGTTaGGAATCCTTGAACACTACT | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFPLPDS*ESLNTT Trigger: AGTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATCCTTCATTTTCTGTTaGATCTGCCTGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTSFIFC*ICLAAS Trigger: GGAGGCTGCCAGGCAGATGCAACAGAAAATGAAGGA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCCTGAAGAACTTGACTaGCTGACATCAGTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFPEELD*LTSVPE Trigger: TTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAAGAGTGTGTCCCGTCTaGTTGGCAGTTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRRVCPV*LAVFFT Trigger: GGTGAAGAAAACTGCCAAGCAGACGGGACACACTCT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAAGAGTGTGTCCCGTCTaGTTGGCAGTTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTRVCPV*LAVFFT Trigger: GGTGAAGAAAACTGCCAAGCAGACGGGACACACTCT...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCACTCTGGGTATAGCTTaGGCACATCCTGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFTLGIA*AHPEGH Trigger: ATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGATGTGTCCCGTCTGCTTaGCAGTTTTCTTCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRCVPSA*QFSSPW Trigger: CCATGGTGAAGAAAACTGCCAAGCAGACGGGACACA...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCTTGAATCTTTGGTCTaGAGCCGAAGGTCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFLESLV*SRRSDI Trigger: GATGTCTGACCTTCGGCTCCAGACCAAAGATTCAAG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107971.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGATTCTGGGAGCTCAGATaGAAGAACAACCCCTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRFWELR*KNNPYE Trigger: TTCGTAGGGGTTGTTCTTTCATCTGAGCTCCCAGAA...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR TCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAAAGAACTTGACTGCCTaGCATCAGTGCCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRKNLTA*HQCQKL Trigger: AAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACCTCAAATCCAAAGTACACAGAAAACATACCGCCAACTGTCAGCTACTCCTTCATTTTCTGTTaGATCTGCCTGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PETSNPKYTENIPPTVSYSFIFC*ICLAAS Trigger: GGAGGCTGCCAGGCAGATGCAACAGAAAATGAAGGA...GTAGCTGACAGTTGGCGGTATGTTTTCTGTGTACTTTGGATTTGAGGTCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | ACAACAATTAGTAGCACAAATCAAAGCCTCAGGAGTTCGGTCAGTAGACTAAAAACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTISSTNQSLRSSVSRLKTPGDS*AHLHWL Trigger: AAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGT...TTTTAGTCTACTGACCGAACTCCTGAGGCTTTGATTTGTGCTACTAATTGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTGGCTGCTCCTCCGGTTaGCTGCTTCGCTATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGGCSSG*LLRYVE Trigger: CTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCC...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTGGAACAAGGCATATGGGGCCACTCTGGCCTGGTTTAAACTTTACTTTACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKWNKAYGATLAWFKLYFTSLLP*FLTCGA Trigger: TGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGT...AAAGTAAAGTTTAAACCAGGCCAGAGTGGCCCCATATGCCTTGTTCCACTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAAACGATGCATTTAGCTaGACATTCCAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTNDAFS*TFQPLP Trigger: TGGCAAGGGTTGGAATGTGCAGCTAAATGCATCGTT...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAATGTGTAGCTTCTCCTaGGTTGTGCCCATACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTMCSFS*VVPILV Trigger: TACAAGTATGGGCACAACGCAGGAGAAGCTACACAT...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATTCTCTTCCTCCACCTaGTTTCCTATGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTFSSST*FPMSLL Trigger: GAGAAGAGACATAGGAAAGCAGGTGGAGGAAGAGAA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCAGCAGCTTGTAACATaGTATCTGGAAACATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFQQLVT*YLETCR Trigger: CCTACATGTTTCCAGATACCATGTTACAAGCTGCTG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTCTATTCCAGTTGGCCTaGAGCCGAAGGTCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: KAKILWTLIKSQALFPLLLFQLA*SRRSDI Trigger: GATGTCTGACCTTCGGCTCCAGGCCAACTGGAATAG...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTTCCCTTCTGTGCTTGTaGCTCCTCCCTGACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGSLLCL*LLPDSP Trigger: GGGAGAGTCAGGGAGGAGCCACAAGCACAGAAGGGA...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGATCTTCACCATGGCTTTaGTGCCGATGTTGTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRSSPWL*CRCCQY Trigger: ATATTGACAACATCGGCATCAAAGCCATGGTGAAGA...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAATTAACTTCTTCACTTaGATCTTTGGTCTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRINFFT*IFGLEP Trigger: CGGCTCCAGACCAAAGATTCAAGTGAAGAAGTTAAT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107971.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGGCGGGCATCCTTGCTaGCTTGGTCTATTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTGGHPC*LGLLRN Trigger: GTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAGCACCTTTCTGAATTaGTTTGCCAGTAAATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFSTFLN*FASKFS Trigger: GCTGAATTTACTGGCAAAGCAATTCAGAAAGGTGCT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHILPCGMDRLLPSLLAFSLYSF*RHVVND Trigger: ATCGTTAACAACGTGTCTGCAGAAACTGTACAGACT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| 3UTR CAA 72 bp | CAGGTGGCTGTGAAATCACGTGCACAGCTTCCTACTTaGCTTTCTGAAGGCAGCACATACAAAAATAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVAVKSRAQLPT*LSEGSTYKNRL Trigger: CAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAGCTGTGCACGTGATTTCACAGCCACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTATTTTCTGTTGCATCTaGCTGGCAGCCTCCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGIFCCI*LAASHA Trigger: TGCGTGGGAGGCTGCCAGGCAGATGCAACAGAAAAT...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | ACAACAATTAGTAGCACAAATCAAAGCCTCAGGAGTTCGGTCAGTAGACTAAAAGTACTAACGGACTCCTaGTCTGGGGACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTISSTNQSLRSSVSRLKVLTDS*SGDFLH Trigger: GTGCAAGAAGTCCCCAGAGCAGGAGTCCGTTAGTAC...TTTTAGTCTACTGACCGAACTCCTGAGGCTTTGATTTGTGCTACTAATTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTTGTAGGCTCCCACAGTaGACTTCAGAACTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGCRLPQ*TSELVT Trigger: GGTCACCAGTTCTGAAGTGCACTGTGGGAGCCTACA...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | ACAACAATTAGTAGCACAAATCAAAGCCTCAGGAGTTCGGTCAGTAGACTAAAATGTAGGCTCCCACAGTaGACTTCAGAACTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TTISSTNQSLRSSVSRLKCRLPQ*TSELVT Trigger: GGTCACCAGTTCTGAAGTGCACTGTGGGAGCCTACA...TTTTAGTCTACTGACCGAACTCCTGAGGCTTTGATTTGTGCTACTAATTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTCCTGAAGAACTTGACTaGCTGACATCAGTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAKILWTLIKSQALFPLLPEELD*LTSVPE Trigger: TTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGG...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTSLYSF*RHVVND Trigger: ATCGTTAACAACGTGTCTGCAGAAACTGTACAGACT...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAGATCTCCCAGGGATTTaGAATTCATCTTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRDLPGI*NSSSSL Trigger: TAGAGAAGAAGATGAATTCCAAATCCCTGGGAGATC...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGTGGAACAAGGCATATGGGGCCACTCTGGCCTGGTTTAAACTTTACTTTGTGCTTCTTGACGTGTaGAGCAAGTTCTTTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKWNKAYGATLAWFKLYFVLLDV*SKFFTN Trigger: GTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCAC...AAAGTAAAGTTTAAACCAGGCCAGAGTGGCCCCATATGCCTTGTTCCACTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGHLKRATISAKGRRQSTKGLLV*FLDDLN Trigger: ATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTT...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGISKEPQLVQKEGVSRKGLLV*FLDDLN Trigger: ATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGTSLLP*FLTCGA Trigger: TGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGT...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAAGAGTGTGTCCCGTCTaGTTGGCAGTTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTRVCPV*LAVFFT Trigger: GGTGAAGAAAACTGCCAAGCAGACGGGACACACTCT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATTCTGGGAGCTCAGATaGAAGAACAACCCCTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTFWELR*KNNPYE Trigger: TTCGTAGGGGTTGTTCTTTCATCTGAGCTCCCAGAA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACACCCTTGCCAGACAGTTaGGAATCCTTGAACACTACT | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTPLPDS*ESLNTT Trigger: AGTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGG...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTTTTGCTTCTTCCTTCTaGCCTAACTCGTCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGFASSF*PNSSVF Trigger: GAACACGGACGAGTTAGGGCAGAAGGAAGAAGCAAA...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTGCACATTCCAACCCTTaGCAGACAGTTGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGAHSNP*QTVENP Trigger: AGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGC...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTGCATCCTTGCTGCCTTaGTCTATTGAGGAACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGASLLP*SIEEPE Trigger: TTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGC...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAAACGATGCATTTAGCTaGACATTCCAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTNDAFS*TFQPLP Trigger: TGGCAAGGGTTGGAATGTGCAGCTAAATGCATCGTT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTATGTGTAGCTTCTCCTaGGTTGTGCCCATACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGMCSFS*VVPILV Trigger: TACAAGTATGGGCACAACGCAGGAGAAGCTACACAT...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTGTGCTTCTTGACGTGTaGAGCAAGTTCTTTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGVLLDV*SKFFTN Trigger: GTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCAC...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGTGCTTCTTGACGTGTaGAGCAAGTTCTTTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTVLLDV*SKFFTN Trigger: GTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCAC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR CCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACACAGCAGCTTGTAACATaGTATCTGGAAACATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTQQLVT*YLETCR Trigger: CCTACATGTTTCCAGATACCATGTTACAAGCTGCTG...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTAGCACCTTTCTGAATTaGTTTGCCAGTAAATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGSTFLN*FASKFS Trigger: GCTGAATTTACTGGCAAAGCAATTCAGAAAGGTGCT...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR GCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTSLYSF*RHVVND Trigger: ATCGTTAACAACGTGTCTGCAGAAACTGTACAGACT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATTAGAAGCACCTTTCTaGATTGCTTTGCCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTLEAPF*IALPVN Trigger: ATTTACTGGCAAAGCAATTCAGAAAGGTGCTTCTAA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR GCA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGKGLLV*FLDDLN Trigger: ATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTT...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| 3UTR CAA 72 bp | AAGCATTATCTGAGAACAAACTTTAAGATCACAGTTTaGTTTAGCTTATCTGCTGAAAATCCTGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KHYLRTNFKITV*FSLSAENPVGH Trigger: ATGCCCAACAGGATTTTCAGCAGATAAGCTAAACAAAACTGTGATCTTAAAGTTTGTTCTCAGATAATGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | GGAAACAGTGTAGTGGCCCTCAGCAGCCTGTGGGCTGTAGGCTGGTaGCGCTTCGGCAGGGCAGCTGGGCGATGGTACGGGCAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GNSVVALSSLWAVGW*RFGRAAGRWYGQSR Trigger: TCTGCTCTGCCCGTACCATCGCCCAGCTGCCCTGCCGAAGCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGCCACTACACTGTTTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCAGGAGCTGGCTGACTTaGGCTGCTCCTCCGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPARSWLT*AAPPVA Trigger: GGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCT...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | ATAGGAAACAGTGTAGTGGCCCTCAGCAGCCTGTGGGCTGTAGGCTaGTGGCGCTTCGGCAGGGCAGCTGGGCGATGGTACGGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGNSVVALSSLWAVG*WRFGRAAGRWYGQS Trigger: GCTCTGCCCGTACCATCGCCCAGCTGCCCTGCCGAAGCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGCCACTACACTGTTTCCTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS GCA 90 bp | ATTTTCTGTTGCATCTGCCTGGCAGCCTCCCACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCGATGCTGATGCCCCTAAGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFCCICLAASHAGPV*PGSAAAMLMPLSRC Trigger: ACACCTGCTTAGGGGCATCAGCATCGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTGGGAGGCTGCCAGGCAGATGCAACAGAAAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTATGGCTGCTCCTCCGGTaGCCTGCTTCGCTATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLWLLLR*PASLCR Trigger: TCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCA...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGAGGAGCTGGCTGACTTaGGCTGCTCCTCCGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGRSWLT*AAPPVA Trigger: GGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS GCA 90 bp | CGCTACTGTGCAGACGCCGTCAACCAGGAGCTGGCTGACTTTGGCTaGTCCTCCGGTTGCCTGCTTCGCTATGTAGAGACCCCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RYCADAVNQELADFG*SSGCLLRYVETPGD Trigger: GTCACCAGGGGTCTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGGCGTCTGCACAGTAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | TCCTCCGGTTGCCTGCTTCGCTATGTAGAGACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTTTTCCTCCGGCTGAATGCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGCLLRYVETPGDS*AHLHWLFLRLNALS Trigger: AGAGAGCGCATTCAGCCGGAGGAAAAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGTCTCTACATAGCGAAGCAGGCAACCGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTAGATTCCGGAACCAGTTaGCTTCCGTGCTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: NQSTPQPAVGRVSQAPGLDSGTS*LPCFLT Trigger: CGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATC...TAGGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTGCTGCCTTGGTCTATaGAGGAACCTGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPACCLGL*RNLKNL Trigger: CAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGTAAATTCAGCACCTTaGACTAAACCCCAGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAVNSAP*TKPQLT Trigger: GGTGAGCTGGGGTTTAGTCAAAGGTGCTGAATTTAC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCATGGCTGCTCCTCCGGTaGCCTGCTTCGCTATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSWLLLR*PASLCR Trigger: TCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCA...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCAGGAGCTGGCTGACTTaGGCTGCTCCTCCGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSRSWLT*AAPPVA Trigger: GGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCT...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS TCA 90 bp | CAACACAATTCGCTACTGTGCAGACGCCGTCAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGGTTGCCTGCTTCGCTATGTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QHNSLLCRRRQPGAG*LWLLLRLPASLCRD Trigger: GTCTCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGGCGTCTGCACAGTAGCGAATTGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 90 bp | CTTCGCTATGTAGAGACCCCTGGTGACAGCTGGGCTCACCTCCACTaGCTTTTCCTCCGGCTGAATGCGCTCTCTGAGTTTAGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRYVETPGDSWAHLH*LFLRLNALSEFRST Trigger: GGTGCTTCTAAACTCAGAGAGCGCATTCAGCCGGAGGAAAAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGTCTCTACATAGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 90 bp | GCCAGACAGTTGAGAATCCTTGAACACTACTCGCTGCCACGACCATaGCGCCATCCAGGGCAGATTTCCCGTCTTTGTCCCTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARQLRILEHYSLPRP*RHPGQISRLCPSSG Trigger: CCCTGAAGAGGGACAAAGACGGGAAATCTGCCCTGGATGGCGCCATGGTCGTGGCAGCGAGTAGTGTTCAAGGATTCTCAACTGTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAVSADT*LTMHLA Trigger: AGCTAAATGCATCGTTAACAACGTGTCTGCAGAAAC...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS TCA 90 bp | CACGCGTCTTTAGGCGGGAACTCTGGGTATAGCTTGGGCACATCCTaGAGGTCATTCCGTAGAGAAGTGGCAAGGCCCTTCTCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HASLGGNSGYSLGTS*RSFRREVARPFSRI Trigger: GATCCTGGAGAAGGGCCTTGCCACTTCTCTACGGAATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGTTCCCGCCTAAAGACGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 90 bp | AGGGGGCGGCTGGGAACGGTTCCTGTAGAAGTCTTCTCCCACGGATaGAAACTCCCCGGAATCTGTTCCATAGGAAACAGTGTAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRLGTVPVEVFSHG*KLPGICSIGNSVVA Trigger: GGCCACTACACTGTTTCCTATGGAACAGATTCCGGGGAGTTTTCATCCGTGGGAGAAGACTTCTACAGGAACCGTTCCCAGCCGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 90 bp | CTGGGTATAGCTTGGGCACATCCTGAAGGTCATTCCGTAGAGAAGTaGCAAGGCCCTTCTCCAGGATCTCTAGCCTGGTGCGGACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGIAWAHPEGHSVEK*QGPSPGSLAWCGRS Trigger: AGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGGCCTTGCCACTTCTCTACGGAATGACCTTCAGGATGTGCCCAAGCTATACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
||
| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTCTTCACTTGAATCTTaGGTCTTTTTCCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPASSLES*VFFPRF Trigger: AAAGCGTGGGAAAAAGACCAAAGATTCAAGTGAAGA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGACCCTTGCCAGACAGTaGAGAATCCTTGAACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGTLARQ*RILEHY Trigger: GTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGT...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGTCTCACAAGCCCCCGGCCTTCTCGTATGCTTCCTaGATGATCTTAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTSQHPSLQWAGSHKPPAFSYAS*MILISA Trigger: TGCTGAAATTAAGATCATCAAGGAAGCATACGAGAA...GGCCGGGGGCTTGTGAGACCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTGCCCTGCCGTGTCTCACCAGCACACGGCAATCTCTCCTTCCAGTCAACCCTTGCCAGACAGTaGAGAATCCTTGAACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLPCRVSPAHGNLSFQSTLARQ*RILEHY Trigger: GTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGT...TGACTGGAAGGAGAGATTGCCGTGTGCTGGTGAGACACGGCAGGGCAGCACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS TCA 90 bp | CATTTAGCTGCACATTCCAACCCTTGCCAGACAGTTGAGAATCCTTaGACACTACTCGCTGCCACGACCATGGCGCCATCCAGGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLAAHSNPCQTVENP*TLLAATTMAPSRAD Trigger: ATCTGCCCTGGATGGCGCCATGGTCGTGGCAGCGAGTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGCAGCTAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS GCA 90 bp | TCCGTAGAGAAGTGGCAAGGCCCTTCTCCAGGATCTCTAGCCTGGTaGGGACGTTCTGAAGCGTTTCCTTCATTTTCTGTTGCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVEKWQGPSPGSLAW*GRSEAFPSFSVASA Trigger: GGCAGATGCAACAGAAAATGAAGGAAACGCTTCAGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGGCCTTGCCACTTCTCTACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
||
| CDS GCA 90 bp | GCATCCTTGCTGCCTTGGTCTATTGAGGAACCTGAAGAACTTGACTaGCTGACATCAGTGCCAGAAGCTTCCTTCGGTGGTTCAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLLPWSIEEPEELD*LTSVPEASFGGSEG Trigger: CCCCTCTGAACCACCGAAGGAAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTCTTTCCTCTCCTTTGTGGAATGTCTGACTCCCCTGTGCTGTCTTCTGGTTCAGAGGGGTGACTaGATCTCCCAGGGATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSFLSFVECLTPLCCLLVQRGD*ISQGFG Trigger: TCCAAATCCCTGGGAGATCAAGTCACCCCTCTGAAC...CAGAAGACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCTGGCTGCTCCTCCGGTaGCCTGCTTCGCTATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FHILPCGMDRLLPSLLAFWLLLR*PASLCR Trigger: TCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCA...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTTCCACAGGATCAAACCAGTCAACACCCCAGCCTGCAGTGGGCAGGGGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RPLPQDQTSQHPSLQWAGVSADT*LTMHLA Trigger: AGCTAAATGCATCGTTAACAACGTGTCTGCAGAAAC...CCCTGCCCACTGCAGGCTGGGGTGTTGACTGGTTTGATCCTGTGGAAGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATGGCTGCTCCTCCGGTaGCCTGCTTCGCTATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGHLKRATISAKGRRQSTWLLLR*PASLCR Trigger: TCTACATAGCGAAGCAGGCAACCGGAGGAGCAGCCA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | CATTCCGTAGAGAAGTGGCAAGGCCCTTCTCCAGGATCTCTAGCCTaGTGCGGACGTTCTGAAGCGTTTCCTTCATTTTCTGTTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HSVEKWQGPSPGSLA*CGRSEAFPSFSVAS Trigger: AGATGCAACAGAAAATGAAGGAAACGCTTCAGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGGCCTTGCCACTTCTCTACGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
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| CDS CCA 90 bp | CTTCAGGGATTCCGGAACCAGTTTGCTTCCGTGCTTCTTGACGTGTaGAGCAAGTTCTTTACCAACACAATTCGCTACTGTGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQGFRNQFASVLLDV*SKFFTNTIRYCADA Trigger: GGCGTCTGCACAGTAGCGAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTCTTTCCTCTCCTTTGTGGAATGTCTGACTCCCCTGTGCTGTCTTCTGTGCTGCCTTGGTCTATaGAGGAACCTGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSFLSFVECLTPLCCLLCCLGL*RNLKNL Trigger: CAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCA...CAGAAGACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS TCA 90 bp | TGTCCCTCTTCAGGGATTCCGGAACCAGTTTGCTTCCGTGCTTCTTaGCGTGTGGAGCAAGTTCTTTACCAACACAATTCGCTACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSSGIPEPVCFRAS*RVEQVLYQHNSLLC Trigger: GCACAGTAGCGAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAGAGGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS GCA 90 bp | CCGTCTTTGTCCCTCTTCAGGGATTCCGGAACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCAAGTTCTTTACCAACACAATTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLSLFRDSGTSLLP*FLTCGASSLPTQFA Trigger: AGCGAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAGAGGGACAAAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | GTCTTTTTCCCACGCTTTCCTTTATGGCGGGCATCCTTGCTGCCTTaGTCTATTGAGGAACCTGAAGAACTTGACTGCCTGACATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFFPRFPLWRASLLP*SIEEPEELDCLTSV Trigger: CACTGATGTCAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGGGAAAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAGTTCAGAGGGGTGACTaGATCTCCCAGGGATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGHLKRATISAKGRRQSTVQRGD*ISQGFG Trigger: TCCAAATCCCTGGGAGATCAAGTCACCCCTCTGAAC...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
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| CDS-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATTATGGCGGGCATCCTaGCTGCCTTGGTCTATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGHLKRATISAKGRRQSTLWRAS*LPWSIE Trigger: CTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
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| CDS CCA 90 bp | ACTGGTGACCTATCAGGAACTAGAGGGTATAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGGTTCAGAACTGTATCCAGAGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: TGDLSGTRGYNQSHT*RNPGGRFRTVSREL Trigger: TAATTCTCTGGATACAGTTCTGAACCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTTATACCCTCTAGTTCCTGATAGGTCACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCTGCTGCCTTGGTCTATaGAGGAACCTGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHILPCGMDRLLPSLLAFCCLGL*RNLKNL Trigger: CAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCA...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
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| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAAGGAGCTGGCTGACTTaGGCTGCTCCTCCGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTRSWLT*AAPPVA Trigger: GGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCT...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCACCCTTGCCAGACAGTaGAGAATCCTTGAACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: FHILPCGMDRLLPSLLAFTLARQ*RILEHY Trigger: GTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGT...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS TCA 90 bp | GACATCAGTGCCAGAAGCTTCCTTCGGTGGTTCAGAGGGGTGACTTaGTCTCCCAGGGATTTGGAATTCATCTTCTTCTCTATTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DISARSFLRWFRGVT*SPRDLEFIFFSIPV Trigger: AACTGGAATAGAGAAGAAGATGAATTCCAAATCCCTGGGAGATCAAGTCACCCCTCTGAACCACCGAAGGAAGCTTCTGGCACTGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS TCA 90 bp | GCCGATGTTGTCAATATTGTAGGCAGTGAGCCCAACATTGATAGCTaGATCCACTGCGTTATGTGTAGCTTCTCCTGCGTTGTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ADVVNIVGSEPNIDS*IHCVMCSFSCVVPI Trigger: TATGGGCACAACGCAGGAGAAGCTACACATAACGCAGTGGATTCAGCTATCAATGTTGGGCTCACTGCCTACAATATTGACAACATCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS GCA 90 bp | CAGCAGCTTGTAACATGGTATCTGGAAACATGTAGGCTCCCACAGTaGACTTCAGAACTGGTGACCTATCAGGAACTAGAGGGTATAACC | + |
|
Preference number: 5 (lower is better) Translates to: QQLVTWYLETCRLPQ*TSELVTYQELEGIT Trigger: GGTTATACCCTCTAGTTCCTGATAGGTCACCAGTTCTGAAGTGCACTGTGGGAGCCTACATGTTTCCAGATACCATGTTACAAGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCAACCAGCAGGGCACAGTGAAGTCACCTCTCTCCAGAGACCTCAAATCCTTCTCGTATGCTTCCTaGATGATCTTAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSNQQGTVKSPLSRDLKSFSYAS*MILISA Trigger: TGCTGAAATTAAGATCATCAAGGAAGCATACGAGAA...GGATTTGAGGTCTCTGGAGAGAGGTGACTTCACTGTGCCCTGCTGGTTGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAGTAAATTCAGCACCTTaGACTAAACCCCAGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLGISKEPQLVQKEGVSRVNSAP*TKPQLT Trigger: GGTGAGCTGGGGTTTAGTCAAAGGTGCTGAATTTAC...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGAACCCTTGCCAGACAGTaGAGAATCCTTGAACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLGISKEPQLVQKEGVSRTLARQ*RILEHY Trigger: GTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGT...TCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS GCA 90 bp | TCCTGCGTTGTGCCCATACTTGTATCTCACAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGATGCATTTAGCTGCACATTCCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVVPILVSHSLYSF*RHVVNDAFSCTFQP Trigger: GGGTTGGAATGTGCAGCTAAATGCATCGTTAACAACGTGTCTGCAGAAACTGTACAGACTGTGAGATACAAGTATGGGCACAACGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCCAGGTGTCCTATTCCTaGCTTGTAATAGTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHILPCGMDRLLPSLLAFQVSYS*LVIVLC Trigger: GCAAAGAACTATTACAAGCAAGGAATAGGACACCTG...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTGATTCCGGAACCAGTTaGCTTCCGTGCTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KAKILWTLIKSQALFPLLDSGTS*LPCFLT Trigger: CGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATC...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATATTCTTCCCTGTGGTATGGACAGGCTCCTCCCATCACTTCTGGCTTTCTTCTTCACCATGGCTTaGATGCCGATGTTGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FHILPCGMDRLLPSLLAFFFTMA*MPMLSI Trigger: TATTGACAACATCGGCATCAAAGCCATGGTGAAGAA...GAAAGCCAGAAGTGATGGGAGGAGCCTGTCCATACCACAGGGAAGAATATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS CCA 90 bp | ACTTCTTCACTTGAATCTTTGGTCTTTTTCCCACGCTTTCCTTTATaGCGGGCATCCTTGCTGCCTTGGTCTATTGAGGAACCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSSLESLVFFPRFPL*RASLLPWSIEEPEE Trigger: TTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGGGAAAAAGACCAAAGATTCAAGTGAAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACAGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGHLKRATISAKGRRQSTVSADT*LTMHLA Trigger: AGCTAAATGCATCGTTAACAACGTGTCTGCAGAAAC...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGTTCAGAGGGGTGACTaGATCTCCCAGGGATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTVQRGD*ISQGFG Trigger: TCCAAATCCCTGGGAGATCAAGTCACCCCTCTGAAC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAATTAGTAGCACAAATCAAAGCCTCAGGAGTTCGGTCAGTAGACTAAAATTATGGCGGGCATCCTaGCTGCCTTGGTCTATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTISSTNQSLRSSVSRLKLWRAS*LPWSIE Trigger: CTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAA...TTTTAGTCTACTGACCGAACTCCTGAGGCTTTGATTTGTGCTACTAATTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGATTCCGGAACCAGTTaGCTTCCGTGCTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTDSGTS*LPCFLT Trigger: CGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTGATTCCGGAACCAGTTaGCTTCCGTGCTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGDSGTS*LPCFLT Trigger: CGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATC...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCATCTCAAAAGAGCCACAATTAGTGCAAAAGGAAGGCGTCAGTCGACATTCTCGTATGCTTCCTaGATGATCTTAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGHLKRATISAKGRRQSTFSYAS*MILISA Trigger: TGCTGAAATTAAGATCATCAAGGAAGCATACGAGAA...TGTCGACTGACGCCTTCCTTTTGCACTAATTGTGGCTCTTTTGAGATGCCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAATTAGTAGCACAAATCAAAGCCTCAGGAGTTCGGTCAGTAGACTAAAAGTAAATTCAGCACCTTaGACTAAACCCCAGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTISSTNQSLRSSVSRLKVNSAP*TKPQLT Trigger: GGTGAGCTGGGGTTTAGTCAAAGGTGCTGAATTTAC...TTTTAGTCTACTGACCGAACTCCTGAGGCTTTGATTTGTGCTACTAATTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACAGTAAATTCAGCACCTTaGACTAAACCCCAGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTVNSAP*TKPQLT Trigger: GGTGAGCTGGGGTTTAGTCAAAGGTGCTGAATTTAC...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAKILWTLIKSQALFPLLVSADT*LTMHLA Trigger: AGCTAAATGCATCGTTAACAACGTGTCTGCAGAAAC...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAAAATCCTATGGACCTTAATAAAGTCACAGGCCCTCTTTCCTCTCCTTTCTTCACTTGAATCTTaGGTCTTTTTCCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KAKILWTLIKSQALFPLLSSLES*VFFPRF Trigger: AAAGCGTGGGAAAAAGACCAAAGATTCAAGTGAAGA...AAGGAGAGGAAAGAGGGCCTGTGACTTTATTAAGGTCCATAGGATTTTGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117341.2 |
||
| CDS GCA 90 bp | GTCCGTGTTCAGTCCTTTATTAACAAACATAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAATTTCAGCAGGTTCTCCATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVQSFINKHKGLLV*FLDDLNFSRFSIFW Trigger: CCAGAAAATGGAGAACCTGCTGAAATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTTATGTTTGTTAATAAAGGACTGAACACGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATTCTTCACCATGGCTTaGATGCCGATGTTGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTFFTMA*MPMLSI Trigger: TATTGACAACATCGGCATCAAAGCCATGGTGAAGAA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | ATACAAATCATAGTTCAACATTCCTTAGTCTACCTCCATAAAGCCCAGGGAACATCTTCACTTGAATCTTaGGTCTTTTTCCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IQIIVQHSLVYLHKAQGTSSLES*VFFPRF Trigger: AAAGCGTGGGAAAAAGACCAAAGATTCAAGTGAAGA...TGTTCCCTGGGCTTTATGGAGGTAGACTAAGGAATGTTGAACTATGATTTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044116.14 ENSMUST00000118118.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACTTTGCTTTCTGAAGGCAGCACATACAAAAATAGGTTGACATTAGGTTTCTCGTATGCTTCCTaGATGATCTTAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLSEGSTYKNRLTLGFSYAS*MILISA Trigger: TGCTGAAATTAAGATCATCAAGGAAGCATACGAGAA...ACCTAATGTCAACCTATTTTTGTATGTGCTGCCTTCAGAAAGCAAAGTAGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS GCA 72 bp | TGCATCTGCCTGGCAGCCTCCCACGCAGGGCCTGTGTaGCCCGGCTCTGCAGCCGCGATGCTGATGCCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: CICLAASHAGPV*PGSAAAMLMPL Trigger: TAGGGGCATCAGCATCGCGGCTGCAGAGCCGGGGCACACAGGCCCTGCGTGGGAGGCTGCCAGGCAGATGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
||
| CDS CCA 72 bp | GTAGTGGCCCTCAGCAGCCTGTGGGCTGTAGGCTGGTaGCGCTTCGGCAGGGCAGCTGGGCGATGGTACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVALSSLWAVGW*RFGRAAGRWYG Trigger: CCCGTACCATCGCCCAGCTGCCCTGCCGAAGCGCCACCAGCCTACAGCCCACAGGCTGCTGAGGGCCACTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | TCGCTACTGTGCAGACGCCGTCAACCAGGAGCTGGCTaGCTTTGGCTGCTCCTCCGGTTGCCTGCTTCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLCRRRQPGAG*LWLLLRLPASL Trigger: TAGCGAAGCAGGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGGCGTCTGCACAGTAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 72 bp | CAATTCGCTACTGTGCAGACGCCGTCAACCAGGAGCTaGCTGACTTTGGCTGCTCCTCCGGTTGCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QFATVQTPSTRS*LTLAAPPVACF Trigger: GAAGCAGGCAACCGGAGGAGCAGCCAAAGTCAGCCAGCTCCTGGTTGACGGCGTCTGCACAGTAGCGAATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 90 bp | CTCGCTGCCACGACCATGGCGCCATCCAGGGCAGATTTCCCGTCTTaGTCCCTCTTCAGGGATTCCGGAACCAGTTTGCTTCCGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAATTMAPSRADFPS*SLFRDSGTSLLPCF Trigger: GAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAGAGGGACAAAGACGGGAAATCTGCCCTGGATGGCGCCATGGTCGTGGCAGCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 72 bp | GTAGAGACCCCTGGTGACAGCTGGGCTCACCTCCACTaGCTTTTCCTCCGGCTGAATGCGCTCTCTGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VETPGDSWAHLH*LFLRLNALSEF Trigger: AAACTCAGAGAGCGCATTCAGCCGGAGGAAAAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 72 bp | TGCCTGCTTCGCTATGTAGAGACCCCTGGTGACAGCTaGGCTCACCTCCACTGGCTTTTCCTCCGGCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLLRYVETPGDS*AHLHWLFLRLN Trigger: ATTCAGCCGGAGGAAAAGCCAGTGGAGGTGAGCCCAGCTGTCACCAGGGGTCTCTACATAGCGAAGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | GCACATTCCAACCCTTGCCAGACAGTTGAGAATCCTTaGACACTACTCGCTGCCACGACCATGGCGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AHSNPCQTVENP*TLLAATTMAPS Trigger: GGATGGCGCCATGGTCGTGGCAGCGAGTAGTGTTCAAGGATTCTCAACTGTCTGGCAAGGGTTGGAATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS GCA 72 bp | GATCTGCACTCCGTTTGGTATCAAGATCAACTCATCTaGATCGAGCCCCAAGGTCTCAAGAGGGGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLHSVWYQDQLI*IEPQGLKRGRL Trigger: CAGCCGCCCCCTCTTGAGACCTTGGGGCTCGATGCAGATGAGTTGATCTTGATACCAAACGGAGTGCAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 72 bp | TTGAGAATCCTTGAACACTACTCGCTGCCACGACCATaGCGCCATCCAGGGCAGATTTCCCGTCTTTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRILEHYSLPRP*RHPGQISRLCP Trigger: GGGACAAAGACGGGAAATCTGCCCTGGATGGCGCCATGGTCGTGGCAGCGAGTAGTGTTCAAGGATTCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | TTAGGCGGGAACTCTGGGTATAGCTTGGGCACATCCTaGAGGTCATTCCGTAGAGAAGTGGCAAGGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGNSGYSLGTS*RSFRREVARPF Trigger: GAAGGGCCTTGCCACTTCTCTACGGAATGACCTTCAGGATGTGCCCAAGCTATACCCAGAGTTCCCGCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | CCCTTCTCCAGGATCTCTAGCCTGGTGCGGACGTTCTaGAGCGTTTCCTTCATTTTCTGTTGCATCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PFSRISSLVRTF*SVSFIFCCICL Trigger: CAGGCAGATGCAACAGAAAATGAAGGAAACGCTTCAGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
||
| CDS CCA 72 bp | GAGAAGTGGCAAGGCCCTTCTCCAGGATCTCTAGCCTaGTGCGGACGTTCTGAAGCGTTTCCTTCATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EKWQGPSPGSLA*CGRSEAFPSFS Trigger: AGAAAATGAAGGAAACGCTTCAGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGGCCTTGCCACTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
||
| CDS CCA 72 bp | CCACGCTTTCCTTTATGGCGGGCATCCTTGCTGCCTTaGTCTATTGAGGAACCTGAAGAACTTGACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRFPLWRASLLP*SIEEPEELDCL Trigger: CAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | CTCAAACAGCTCTCTGTCATCTTCTGGGAGCTCAGATaGAAGAACAACCCCTACGAAGCACCCAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LKQLSVIFWELR*KNNPYEAPSSL Trigger: CAAGCTGCTGGGTGCTTCGTAGGGGTTGTTCTTTCATCTGAGCTCCCAGAAGATGACAGAGAGCTGTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS GCA 72 bp | AAGTGGCAAGGCCCTTCTCCAGGATCTCTAGCCTGGTaGGGACGTTCTGAAGCGTTTCCTTCATTTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: KWQGPSPGSLAW*GRSEAFPSFSV Trigger: AACAGAAAATGAAGGAAACGCTTCAGAACGTCCGCACCAGGCTAGAGATCCTGGAGAAGGGCCTTGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 |
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| CDS GCA 72 bp | CTGCCTTGGTCTATTGAGGAACCTGAAGAACTTGACTaGCTGACATCAGTGCCAGAAGCTTCCTTCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPWSIEEPEELD*LTSVPEASFGG Trigger: ACCACCGAAGGAAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS CCA 72 bp | CTATCAGGAACTAGAGGGTATAACCAGTCACACACCTaGAGAAACCCAGGAGGGCGGTTCAGAACTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSGTRGYNQSHT*RNPGGRFRTVS Trigger: GGATACAGTTCTGAACCGCCCTCCTGGGTTTCTCCAGGTGTGTGACTGGTTATACCCTCTAGTTCCTGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS CCA 72 bp | GAACAACCCCTACGAAGCACCCAGCAGCTTGTAACATaGTATCTGGAAACATGTAGGCTCCCACAGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: EQPLRSTQQLVT*YLETCRLPQCT Trigger: AGTGCACTGTGGGAGCCTACATGTTTCCAGATACCATGTTACAAGCTGCTGGGTGCTTCGTAGGGGTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS TCA 72 bp | CTGGGAACGGTTCCTGTAGAAGTCTTCTCCCACGGATaGAAACTCCCCGGAATCTGTTCCATAGGAAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGTVPVEVFSHG*KLPGICSIGNS Trigger: ACTGTTTCCTATGGAACAGATTCCGGGGAGTTTTCATCCGTGGGAGAAGACTTCTACAGGAACCGTTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS TCA 72 bp | CTTGGTCTATTGAGGAACCTGAAGAACTTGACTGCCTaGCATCAGTGCCAGAAGCTTCCTTCGGTGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLLRNLKNLTA*HQCQKLPSVVQ Trigger: CTGAACCACCGAAGGAAGCTTCTGGCACTGATGTCAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS GCA 72 bp | TCCCTCTTCAGGGATTCCGGAACCAGTTTGCTTCCGTaGTTCTTGACGTGTGGAGCAAGTTCTTTACCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SLFRDSGTSLLP*FLTCGASSLPT Trigger: TGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 72 bp | CGCGATGCTGATGCCCCTAAGCAGGTGTCCTATTCCTaGCTTGTAATAGTTCTTTGCTTCTTCCTTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RDADAPKQVSYS*LVIVLCFFLLP Trigger: GGGCAGAAGGAAGAAGCAAAGAACTATTACAAGCAAGGAATAGGACACCTGCTTAGGGGCATCAGCATCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
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| CDS CAA 90 bp | GAATCTTTGGTCTTTTTCCCACGCTTTCCTTTATGGCGGGCATCCTaGCTGCCTTGGTCTATTGAGGAACCTGAAGAACTTGACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESLVFFPRFPLWRAS*LPWSIEEPEELDCL Trigger: CAGGCAGTCAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGGGAAAAAGACCAAAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 90 bp | TTGTCCCTCTTCAGGGATTCCGGAACCAGTTTGCTTCCGTGCTTCTaGACGTGTGGAGCAAGTTCTTTACCAACACAATTCGCTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLFRDSGTSLLPCF*TCGASSLPTQFATV Trigger: CACAGTAGCGAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAAGAGGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS GCA 72 bp | TCTTTTTCCCACGCTTTCCTTTATGGCGGGCATCCTTaGTGCCTTGGTCTATTGAGGAACCTGAAGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSHAFLYGGHP*CLGLLRNLKNL Trigger: CAAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGGGAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 72 bp | GTCTTTTTCCCACGCTTTCCTTTATGGCGGGCATCCTaGCTGCCTTGGTCTATTGAGGAACCTGAAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: VFFPRFPLWRAS*LPWSIEEPEEL Trigger: AAGTTCTTCAGGTTCCTCAATAGACCAAGGCAGCAAGGATGCCCGCCATAAAGGAAAGCGTGGGAAAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 72 bp | GCGTTATGTGTAGCTTCTCCTGCGTTGTGCCCATACTaGTATCTCACAGTCTGTACAGTTTCTGCAGACACG | + |
|
Preference number: 6 (lower is better) Translates to: ALCVASPALCPY*YLTVCTVSADT Trigger: CGTGTCTGCAGAAACTGTACAGACTGTGAGATACAAGTATGGGCACAACGCAGGAGAAGCTACACATAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS CAA 90 bp | GAATCCACTGCGTTATGTGTAGCTTCTCCTGCGTTGTGCCCATACTaGTATCTCACAGTCTGTACAGTTTCTGCAGACACGTTGTTAACG | + |
|
Preference number: 6 (lower is better) Translates to: ESTALCVASPALCPY*YLTVCTVSADTLLT Trigger: CGTTAACAACGTGTCTGCAGAAACTGTACAGACTGTGAGATACAAGTATGGGCACAACGCAGGAGAAGCTACACATAACGCAGTGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | CTCGCTCCATTCAGGCAATTCTTTCGATTTTTCTTCTaGACTCGGCTCACAGGGCACAATCTGGCTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: LAPFRQFFRFFF*TRLTGHNLAQI Trigger: AATCTGAGCCAGATTGTGCCCTGTGAGCCGAGTTCAGAAGAAAAATCGAAAGAATTGCCTGAATGGAGCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS TCA 72 bp | ACAGGGCACAATCTGGCTCAGATTAACTTCTTCACTTaGATCTTTGGTCTGGAGCCGAAGGTCAGACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGHNLAQINFFT*IFGLEPKVRHL Trigger: CAGATGTCTGACCTTCGGCTCCAGACCAAAGATTCAAGTGAAGAAGTTAATCTGAGCCAGATTGTGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107971.9 |
||
| CDS GCA 72 bp | GTAACATGGTATCTGGAAACATGTAGGCTCCCACAGTaGACTTCAGAACTGGTGACCTATCAGGAACTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTWYLETCRLPQ*TSELVTYQELE Trigger: CTCTAGTTCCTGATAGGTCACCAGTTCTGAAGTGCACTGTGGGAGCCTACATGTTTCCAGATACCATGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CCA 72 bp | TTCCGGAACCAGTTTGCTTCCGTGCTTCTTGACGTGTaGAGCAAGTTCTTTACCAACACAATTCGCTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: FRNQFASVLLDV*SKFFTNTIRYC Trigger: ACAGTAGCGAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
||
| CDS CAA 72 bp | TTCAGGGATTCCGGAACCAGTTTGCTTCCGTGCTTCTaGACGTGTGGAGCAAGTTCTTTACCAACACAATTC | + |
|
Preference number: 6 (lower is better) Translates to: FRDSGTSLLPCF*TCGASSLPTQF Trigger: GAATTGTGTTGGTAAAGAACTTGCTCCACACGTCAAGAAGCACGGAAGCAAACTGGTTCCGGAATCCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS CAA 90 bp | TGCCCATACTTGTATCTCACAGTCTGTACAGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCTGCACATTCCAACCCTTGCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: CPYLYLTVCTVSADT*LTMHLAAHSNPCQT Trigger: TGTCTGGCAAGGGTTGGAATGTGCAGCTAAATGCATCGTTAACAACGTGTCTGCAGAAACTGTACAGACTGTGAGATACAAGTATGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS TCA 72 bp | GTCAATATTGTAGGCAGTGAGCCCAACATTGATAGCTaGATCCACTGCGTTATGTGTAGCTTCTCCTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: VNIVGSEPNIDS*IHCVMCSFSCV Trigger: AACGCAGGAGAAGCTACACATAACGCAGTGGATTCAGCTATCAATGTTGGGCTCACTGCCTACAATATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS GCA 72 bp | GTGCCCATACTTGTATCTCACAGTCTGTACAGTTTCTaGAGACACGTTGTTAACGATGCATTTAGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: VPILVSHSLYSF*RHVVNDAFSCT Trigger: TGTGCAGCTAAATGCATCGTTAACAACGTGTCTGCAGAAACTGTACAGACTGTGAGATACAAGTATGGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000118118.8 |
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| CDS CAA 72 bp | TTGTATCTCACAGTCTGTACAGTTTCTGCAGACACGTaGTTAACGATGCATTTAGCTGCACATTCCAACCCT | + |
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Preference number: 6 (lower is better) Translates to: LYLTVCTVSADT*LTMHLAAHSNP Trigger: AGGGTTGGAATGTGCAGCTAAATGCATCGTTAACAACGTGTCTGCAGAAACTGTACAGACTGTGAGATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 |
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| CDS GCA 72 bp | CAGTCCTTTATTAACAAACATAAAGGCCTTCTCGTATaGTTCCTTGATGATCTTAATTTCAGCAGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSFINKHKGLLV*FLDDLNFSRFS Trigger: GGAGAACCTGCTGAAATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTTATGTTTGTTAATAAAGGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
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| CDS CAA 90 bp | TTCAGTCCTTTATTAACAAACATAAAGGCCTTCTCGTATGCTTCCTaGATGATCTTAATTTCAGCAGGTTCTCCATTTTCTGGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FSPLLTNIKAFSYAS*MILISAGSPFSGSL Trigger: GAGAGAACCAGAAAATGGAGAACCTGCTGAAATTAAGATCATCAAGGAAGCATACGAGAAGGCCTTTATGTTTGTTAATAAAGGACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044116.14 ENSMUST00000107971.9 ENSMUST00000117341.2 ENSMUST00000118118.8 ENSMUST00000146109.2 ENSMUST00000149767.2 |
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