Pregenerated sensors for SPESP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046846Ensembl transcript IDs: ENSMUST00000056949.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACCCTTGGCCTCAGCTCAACACTTACACACGTTCTTCCTGTGCCTaGAGTATTCTCTTCCCCCAAGCATATCTCGTCTCTCAGACCTCC | + |
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Preference number: 1 (lower is better) Translates to: YPWPQLNTYTRSSCA*SILFPQAYLVSQTS Trigger: GGAGGTCTGAGAGACGAGATATGCTTGGGGGAAGAGAATACTGCAGGCACAGGAAGAACGTGTGTAAGTGTTGAGCTGAGGCCAAGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 90 bp | CCCATAATGACCCCAGTACATCACCCACTTTCCAAAGAAGCAACATaGACCCACATGGGAGAGTTCCGACATCAGCCTCAAGTGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: PIMTPVHHPLSKEAT*THMGEFRHQPQVYH Trigger: ATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGGGTGCATGTTGCTTCTTTGGAAAGTGGGTGATGTACTGGGGTCATTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 90 bp | GTTAATGCACAGCACAAAGCCTGCCAGCTTCTCTCTGGCCTTCTGTaGCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: VNAQHKACQLLSGLL*LLCLGIFSLALLEP Trigger: AGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCACAGAAGGCCAGAGAGAAGCTGGCAGGCTTTGTGCTGTGCATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR TCA 90 bp | CCTTCTGTGCCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTTaGACCTTCTACCCTTGGCCTCAGCTCAACACTTACACACGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSVPALSWNILSGTS*TFYPWPQLNTYTRS Trigger: AGAACGTGTGTAAGTGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCACAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CCA 90 bp | CCCCAGTACATCACCCACTTTCCAAAGAAGCAACATGCACCCACATaGGAGAGTTCCGACATCAGCCTCAAGTGTACCATTCATACAGAA | + |
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Preference number: 1 (lower is better) Translates to: PQYITHFPKKQHAPT*ESSDISLKCTIHTE Trigger: TTCTGTATGAATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGGGTGCATGTTGCTTCTTTGGAAAGTGGGTGATGTACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 90 bp | TTCTCTTCCCCCAAGCATATCTCGTCTCTCAGACCTCCCCTCAAATaGCACTCGCCTAAGGCTACTTCTCTTGATATTCTAGATGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: FSSPKHISSLRPPLK*HSPKATSLDILDEV Trigger: AACTTCATCTAGAATATCAAGAGAAGTAGCCTTAGGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCTTGGGGGAAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR TCA 90 bp | TGTAAATCTTTAATGTGTTTGTATGCAAGGCCAGGGAGGAAATTGTaGGGATGGCCTTCATCACAGATCCAGTCCCCCATAATGACCCCA | + |
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Preference number: 1 (lower is better) Translates to: CKSLMCLYARPGRKL*GWPSSQIQSPIMTP Trigger: TGGGGTCATTATGGGGGACTGGATCTGTGATGAAGGCCATCCTCACAATTTCCTCCCTGGCCTTGCATACAAACACATTAAAGATTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR GCA 90 bp | TGTAATCCAAGGCAGATCTGGCTCCAGCACAGCTCCTGTCCACCTCAGTCTGCCCGTTCTTCCTGTGCCTaGAGTATTCTCTTCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: CNPRQIWLQHSSCPPQSARSSCA*SILFPQ Trigger: TTGGGGGAAGAGAATACTGCAGGCACAGGAAGAACG...GGCAGACTGAGGTGGACAGGAGCTGTGCTGGAGCCAGATCTGCCTTGGATTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCCCAGGGAGGAAATTGTaGGGATGGCCTTCATCACAG | + |
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Preference number: 2 (lower is better) Translates to: RASRGAARDEMVLRIQLSPGRKL*GWPSSQ Trigger: CTGTGATGAAGGCCATCCTCACAATTTCCTCCCTGG...GCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCATACTCTCTGGCACTTCTTaGACCTTCTACCCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ASRGAARDEMVLRIQLSILSGTS*TFYPWP Trigger: AGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAG...TATGCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR GCA 90 bp | GGAATATTCTCTCTGGCACTTCTTGAACCTTCTACCCTTGGCCTCAGCTCAACAAGACCTCCCCTCAAATaGCACTCGCCTAAGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: GIFSLALLEPSTLGLSSTRPPLK*HSPKAT Trigger: AGTAGCCTTAGGCGAGTGGCATTTGAGGGGAGGTCT...TGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CCA 90 bp | AACATTTGCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGACTGCCAGCTTCTCTCTaGCCTTCTGTGCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: NICKCSSKAERASRGAARLPASL*PSVPAL Trigger: CAGAGCAGGCACAGAAGGCCAGAGAGAAGCTGGCAG...TCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGCAAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTTGAACCTTCTACCCACACGTTCTTCCTGTaGCTGCAGTATTCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LCLLCLGIFSLALLEPSTHTFFL*LQYSLP Trigger: GGGAAGAGAATACTGCAGGCACAGGAAGAACGTGTG...GGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCATATGGTTCTGTTTGTTCTaGCTTTTGTCACTTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ASRGAARDEMVLRIQLSIWFCLF*LLSLPP Trigger: GGGAGGAAGTGACAAAAGCCAGAACAAACAGAACCA...TATGCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR GCA 90 bp | AACTGTAGCCAGAGTGTTACATTTAAACACACTGGTTGGTGTCTGATACAAAGCGCACAGCACAAAGCCTaGCAGCTTCTCTCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: NCSQSVTFKHTGWCLIQSAQHKA*QLLSGL Trigger: AAGGCCAGAGAGAAGCTGGCAGGCTTTGTGCTGTGC...GCTTTGTATCAGACACCAACCAGTGTGTTTAAATGTAACACTCTGGCTACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTTCTGGCTTTTGTCACTTCCTCCCATGTAATCCAAGGCAGATCTGGCTCATACTGGCCAAGTCATaGAACAAAACTGCACTTTCG | + |
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Preference number: 2 (lower is better) Translates to: VCSGFCHFLPCNPRQIWLILAKS*NKTALS Trigger: CGAAAGTGCAGTTTTGTTTCATGACTTGGCCAGTAT...GAGCCAGATCTGCCTTGGATTACATGGGAGGAAGTGACAAAAGCCAGAACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGAGATGAAATGTACAGTGGTTTTGTaGAAGCAAACCTCTGTATCA | + |
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Preference number: 2 (lower is better) Translates to: ANVLQKLREPHVVQLEMKCTVVL*KQTSVS Trigger: TGATACAGAGGTTTGCTTTCACAAAACCACTGTACA...TTTCATCTCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR GCA 90 bp | GGAATATTCTCTCTGGCACTTCTTGAACCTTCTACCCTTGGCCTCAGCTCAACATTTAATGTGTTTGTATaGAAGGCCAGGGAGGAAATT | + |
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Preference number: 2 (lower is better) Translates to: GIFSLALLEPSTLGLSSTFNVFV*KAREEI Trigger: AATTTCCTCCCTGGCCTTGCATACAAACACATTAAA...TGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CCA 90 bp | AACTGTAGCCAGAGTGTTACATTTAAACACACTGGTTGGTGTCTGATACAAAGCGTGCCTGCTCTGTCTTaGAATATTCTCTCTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: NCSQSVTFKHTGWCLIQSVPALS*NILSGT Trigger: AGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCAC...GCTTTGTATCAGACACCAACCAGTGTGTTTAAATGTAACACTCTGGCTACAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CCA 90 bp | AACATTTGCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGAAAGCACGGTGTACAGTaGTTTTGTGAAAGCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: NICKCSSKAERASRGAARKHGVQ*FCESKP Trigger: AGGTTTGCTTTCACAAAACCACTGTACACCGTGCTT...TCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGCAAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR TCA 90 bp | AACTGTAGCCAGAGTGTTACATTTAAACACACTGGTTGGTGTCTGATACAAAGCATGCTTATTTTCCTGTaGACAAGTCCTTTGCTTACA | + |
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Preference number: 2 (lower is better) Translates to: NCSQSVTFKHTGWCLIQSMLIFL*TSPLLT Trigger: TGTAAGCAAAGGACTTGTTCACAGGAAAATAAGCAT...GCTTTGTATCAGACACCAACCAGTGTGTTTAAATGTAACACTCTGGCTACAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CCA 72 bp | TTTTGTCACTTCCTCCCATGTAATCCAAGGCAGATCTaGCTCCAGCACAGCTCCTGTCCACCTCAGTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: FCHFLPCNPRQI*LQHSSCPPQSA Trigger: GGCAGACTGAGGTGGACAGGAGCTGTGCTGGAGCCAGATCTGCCTTGGATTACATGGGAGGAAGTGACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | CAGCACAAAGCCTGCCAGCTTCTCTCTGGCCTTCTGTaGCTGCTCTGTCTTGGAATATTCTCTCTGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: QHKACQLLSGLL*LLCLGIFSLAL Trigger: AAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCACAGAAGGCCAGAGAGAAGCTGGCAGGCTTTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCTCTCTCTGGCACTTCTaGAACCTTCTACCCTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RASRGAARDEMVLRIQLSSLWHF*NLLPLA Trigger: GGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGA...GCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | ACCCCAGTACATCACCCACTTTCCAAAGAAGCAACATaGACCCACATGGGAGAGTTCCGACATCAGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: TPVHHPLSKEAT*THMGEFRHQPQ Trigger: TTGAGGCTGATGTCGGAACTCTCCCATGTGGGTGCATGTTGCTTCTTTGGAAAGTGGGTGATGTACTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | CCTCAGCTCAACACTTACACACGTTCTTCCTGTGCCTaGAGTATTCTCTTCCCCCAAGCATATCTCGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: PQLNTYTRSSCA*SILFPQAYLVS Trigger: AGAGACGAGATATGCTTGGGGGAAGAGAATACTGCAGGCACAGGAAGAACGTGTGTAAGTGTTGAGCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | TTGGCCTCAGCTCAACACTTACACACGTTCTTCCTGTaGCTGCAGTATTCTCTTCCCCCAAGCATATCTCGT | + |
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Preference number: 3 (lower is better) Translates to: LASAQHLHTFFL*LQYSLPPSISR Trigger: ACGAGATATGCTTGGGGGAAGAGAATACTGCAGGCACAGGAAGAACGTGTGTAAGTGTTGAGCTGAGGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR TCA 72 bp | CCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTTaGACCTTCTACCCTTGGCCTCAGCTCAACACTTAC | + |
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Preference number: 3 (lower is better) Translates to: PALSWNILSGTS*TFYPWPQLNTY Trigger: GTAAGTGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | CCCAAGCATATCTCGTCTCTCAGACCTCCCCTCAAATaGCACTCGCCTAAGGCTACTTCTCTTGATATTCTA | + |
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Preference number: 3 (lower is better) Translates to: PKHISSLRPPLK*HSPKATSLDIL Trigger: TAGAATATCAAGAGAAGTAGCCTTAGGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CCA 72 bp | ATCACCCACTTTCCAAAGAAGCAACATGCACCCACATaGGAGAGTTCCGACATCAGCCTCAAGTGTACCATT | + |
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Preference number: 3 (lower is better) Translates to: ITHFPKKQHAPT*ESSDISLKCTI Trigger: AATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGGGTGCATGTTGCTTCTTTGGAAAGTGGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTGTTCTGGCTTTTGTCACTTCCTCCCATGTAATCCAAGGCAGATCTGGCTCTTGAACCTTCTACCCTaGGCCTCAGCTCAACACTTA | + |
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Preference number: 3 (lower is better) Translates to: VCSGFCHFLPCNPRQIWLLNLLP*ASAQHL Trigger: TAAGTGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAA...GAGCCAGATCTGCCTTGGATTACATGGGAGGAAGTGACAAAAGCCAGAACAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR TCA 72 bp | TTAATGTGTTTGTATGCAAGGCCAGGGAGGAAATTGTaGGGATGGCCTTCATCACAGATCCAGTCCCCCATA | + |
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Preference number: 3 (lower is better) Translates to: LMCLYARPGRKL*GWPSSQIQSPI Trigger: TATGGGGGACTGGATCTGTGATGAAGGCCATCCTCACAATTTCCTCCCTGGCCTTGCATACAAACACATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR TCA 72 bp | GCCAGAGTGTTACATTTAAACACACTGGTTGGTGTCTaGTACAAAGCCGAGCACAAGATAAAGGTGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: ARVLHLNTLVGV*YKAEHKIKVKW Trigger: CCATTTCACCTTTATCTTGTGCTCGGCTTTGTATCAGACACCAACCAGTGTGTTTAAATGTAACACTCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR GCA 72 bp | CAGCCTCAAGTGTACCATTCATACAGAAAACGCAGATaGTCTGAAAGTGGGTTCAAAACTGTAAGCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QPQVYHSYRKRR*SESGFKTVSSS Trigger: AGAACTGCTTACAGTTTTGAACCCACTTTCAGAGCATCTGCGTTTTCTGTATGAATGGTACACTTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CCA 72 bp | AACTGTAGCCAGAGTGTTACATTTAAACACACTGGTTaGTGTCTGATACAAAGCCGAGCACAAGATAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: NCSQSVTFKHTG*CLIQSRAQDKG Trigger: ACCTTTATCTTGTGCTCGGCTTTGTATCAGACACCAACCAGTGTGTTTAAATGTAACACTCTGGCTACAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR GCA 90 bp | TCTGAAAGTGGGTTCAAAACTGTAAGCAGTTCTTTTAACCCTGACCCAGCCCAACTTGTGCTCGGCGGCTaGGGCCAGGGCCAGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SESGFKTVSSSFNPDPAQLVLGG*GQGQAP Trigger: CGGAGCCTGGCCCTGGCCGCAGCCGCCGAGCACAAG...TTGGGCTGGGTCAGGGTTAAAAGAACTGCTTACAGTTTTGAACCCACTTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR GCA 90 bp | AGAGCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCTCGGGCTCTGACATTTaGCGGGATTCAGCCACGGGC | + |
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Preference number: 4 (lower is better) Translates to: RASRGAARDEMVLRIQLSSGSDI*RDSATG Trigger: GCCCGTGGCTGAATCCCGGCAAATGTCAGAGCCCGA...GCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR GCA 90 bp | CTCTTCCCCCAAGCATATCTCGTCTCTCAGACCTCCCCTCAAATGCCACTCGCCTGGAGACATCCATGGTaGTGGTGGTCTTTACTGTTA | + |
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Preference number: 4 (lower is better) Translates to: LFPQAYLVSQTSPQMPLAWRHPW*WWSLLL Trigger: TAACAGTAAAGACCACCAGCACCATGGATGTCTCCA...GGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCTTGGGGGAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | AGCATATCTCGTCTCTCAGACCTCCCCTCAAATGCCACTCGCCTAAGGCTACTTTGGGTGTTAGCTGGCTaGGTGGCCATGGATGATATC | + |
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Preference number: 4 (lower is better) Translates to: SISRLSDLPSNATRLRLLWVLAG*VAMDDI Trigger: GATATCATCCATGGCCACCCAGCCAGCTAACACCCA...AAGTAGCCTTAGGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR TCA 90 bp | CCACATGGGAGAGTTCCGACATCAGCCTCAAGTGTACCATTCATACAGAAAACGAGACTAACCCAGGGGTaGGTAGCACCTTGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: PHGRVPTSASSVPFIQKTRLTQG*VAPWMP Trigger: TGGCATCCAAGGTGCTACTCACCCCTGGGTTAGTCT...CGTTTTCTGTATGAATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR TCA 90 bp | GCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGAGATGAAAGATTTCCGACTGGCCTaGGAGCTGGGGTACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: ANVLQKLREPHVVQLEMKDFRLA*ELGYIL Trigger: GAGGATGTACCCCAGCTCTCAGGCCAGTCGGAAATC...TTTCATCTCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | AGAGCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCCTGTGGAGACATCCATaGTGCTGGTGGTCTTTACTG | + |
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Preference number: 4 (lower is better) Translates to: RASRGAARDEMVLRIQLSLWRHP*CWWSLL Trigger: CAGTAAAGACCACCAGCACCATGGATGTCTCCACAG...GCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | GTTTGTTCTGGCTTTTGTCACTTCCTCCCATGTAATCCAAGGCAGATCTGGCTCGACTGGCCTGAGAGCTaGGGTACATCCTCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCSGFCHFLPCNPRQIWLDWPES*GTSSES Trigger: AGACTCTGAGGATGTACCCCAGCTCTCAGGCCAGTC...GAGCCAGATCTGCCTTGGATTACATGGGAGGAAGTGACAAAAGCCAGAACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR TCA 90 bp | CTCTTCCCCCAAGCATATCTCGTCTCTCAGACCTCCCCTCAAATGCCACTCGCCCTTTTCTCTCAGCTCTaGTGGTACACGCTTAATATT | + |
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Preference number: 4 (lower is better) Translates to: LFPQAYLVSQTSPQMPLALFSQL*WYTLNI Trigger: AATATTAAGCGTGTACCATCAGAGCTGAGAGAAAAG...GGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCTTGGGGGAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | CTCTTCCCCCAAGCATATCTCGTCTCTCAGACCTCCCCTCAAATGCCACTCGCCACTAGACTCCAGTTCTaGTTCCGGTTCTTTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LFPQAYLVSQTSPQMPLATRLQF*FRFFFN Trigger: ATTGAAAAAGAACCGGAACCAGAACTGGAGTCTAGT...GGCGAGTGGCATTTGAGGGGAGGTCTGAGAGACGAGATATGCTTGGGGGAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | CCACATGGGAGAGTTCCGACATCAGCCTCAAGTGTACCATTCATACAGAAAACGCATCCTCAGAGTCTGTaGAGACATCCATGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PHGRVPTSASSVPFIQKTHPQSL*RHPWCW Trigger: CCAGCACCATGGATGTCTCCACAGACTCTGAGGATG...CGTTTTCTGTATGAATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR TCA 90 bp | GCCTCACGTGGTGCAGCTAGAGATGAAATGGTCTTGAGGATCCAGTTGAGCATACCAAGAAGCCCCTGCTaGATCTCCGCATTAATATTG | + |
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Preference number: 4 (lower is better) Translates to: ASRGAARDEMVLRIQLSIPRSPC*ISALIL Trigger: CAATATTAATGCGGAGATTCAGCAGGGGCTTCTTGG...TATGCTCAACTGGATCCTCAAGACCATTTCATCTCTAGCTGCACCACGTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CCA 90 bp | GAGGGACATAGCTCTTCACTCTATCCCCAAAGCCTAGCATTTTGTTCTAGCAGATTCCATGTCATTGTCTaGGTCGCTGGTACGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: EGHSSSLYPQSLAFCSSRFHVIV*VAGTSL Trigger: GAGGGACGTACCAGCGACCCAGACAATGACATGGAA...TCTGCTAGAACAAAATGCTAGGCTTTGGGGATAGAGTGAAGAGCTATGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CAA 72 bp | GCCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTaGAACCTTCTACCCTTGGCCTCAGCTCAACACTTA | + |
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Preference number: 4 (lower is better) Translates to: ACSVLEYSLWHF*NLLPLASAQHL Trigger: TAAGTGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR TCA 90 bp | AAGCAACATGCACCCACATGGGAGAGTTCCGACATCAGCCTCAAGTGTACCATTGCTATCCACAGTTCTTaGAGAACTCAACTTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KQHAPTWESSDISLKCTIAIHSS*RTQLFP Trigger: GGGAAAAAGTTGAGTTCTTCAAGAACTGTGGATAGC...AATGGTACACTTGAGGCTGATGTCGGAACTCTCCCATGTGGGTGCATGTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| 3UTR CAA 72 bp | GAATATTCTCTCTGGCACTTCTTGAACCTTCTACCCTaGGCCTCAGCTCAACACTTACACACGTTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: EYSLWHFLNLLP*ASAQHLHTFFL Trigger: CAGGAAGAACGTGTGTAAGTGTTGAGCTGAGGCCAAGGGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS GCA 90 bp | CGTCCCTCTGGGAAGACGTTAGATCCGTACATCTGTTCCAACTTGTaGTCGGCGGCTGCGGCCAGGGCCAGGCTCCGTTTCAGGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RPSGKTLDPYICSNL*SAAAARARLRFRCS Trigger: GGAGCACCTGAAACGGAGCCTGGCCCTGGCCGCAGCCGCCGAGCACAAGTTGGAACAGATGTACGGATCTAACGTCTTCCCAGAGGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS GCA 90 bp | GAAGACGTTAGATCCGTACATCTGTTCCAACTTGTGCTCGGCGGCTaGGGCCAGGGCCAGGCTCCGTTTCAGGTGCTCCCTGGAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: EDVRSVHLFQLVLGG*GQGQAPFQVLPGGL Trigger: AAGGCCTCCAGGGAGCACCTGAAACGGAGCCTGGCCCTGGCCGCAGCCGCCGAGCACAAGTTGGAACAGATGTACGGATCTAACGTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | CAGCACAGCTCCTGTCCACCTCAGTCTGCCCCTAAAACTGTAGCCAGAGTGTTACCGAGATCCTGCTCCTaGGTGGGGACACTCATTATG | + |
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Preference number: 5 (lower is better) Translates to: QHSSCPPQSAPKTVARVLPRSCS*VGTLIM Trigger: CATAATGAGTGTCCCCACCAAGGAGCAGGATCTCGG...TAACACTCTGGCTACAGTTTTAGGGGCAGACTGAGGTGGACAGGAGCTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 90 bp | TCCATGGTGCTGGTGGTCTTTACTGTTACAGTAATACGAGTTGCCTaGGTGTTAGCTGGCTGGGTGGCCATGGATGATATCCGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SMVLVVFTVTVIRVA*VLAGWVAMDDIREV Trigger: GACCTCACGGATATCATCCATGGCCACCCAGCCAGCTAACACCCAGGCAACTCGTATTACTGTAACAGTAAAGACCACCAGCACCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | GCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGAGATGAAAGGGGTGAGTAGCACCTaGGATGCCAATGACCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: ANVLQKLREPHVVQLEMKGVSST*DANDLG Trigger: GCCAAGGTCATTGGCATCCAAGGTGCTACTCACCCC...TTTCATCTCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | CTGTGCCTGCTCTGTCTTGGAATATTCTCTCTGGCACTTCTTGAACCTTCTACCAACTCGGGACTATTATaGCCACCAAGAAGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LCLLCLGIFSLALLEPSTNSGLL*PPRSPC Trigger: GCAGGGGCTTCTTGGTGGCAATAATAGTCCCGAGTT...GGTAGAAGGTTCAAGAAGTGCCAGAGAGAATATTCCAAGACAGAGCAGGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | TGTAATCCAAGGCAGATCTGGCTCCAGCACAGCTCCTGTCCACCTCAGTCTGCCAACTTGGACCTGGAGTaGTACAGCATATTGATAATC | + |
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Preference number: 5 (lower is better) Translates to: CNPRQIWLQHSSCPPQSANLDLE*YSILII Trigger: GATTATCAATATGCTGTACAACTCCAGGTCCAAGTT...GGCAGACTGAGGTGGACAGGAGCTGTGCTGGAGCCAGATCTGCCTTGGATTACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | GCAAATGTTCTTCAAAAGCTGAGAGAGCCTCACGTGGTGCAGCTAGAGATGAAAATCATTTCCATGTCATaGTCTGGGTCGCTGGTACGT | + |
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Preference number: 5 (lower is better) Translates to: ANVLQKLREPHVVQLEMKIISMS*SGSLVR Trigger: ACGTACCAGCGACCCAGACAATGACATGGAAATGAT...TTTCATCTCTAGCTGCACCACGTGAGGCTCTCTCAGCTTTTGAAGAACATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 90 bp | ACAACAGAAATATTGTTTGGCCGGATGGACCAGAATGCTGTACTTTaGGTTCTTCTTCTCCTCAGCGTGAAGCCTCTAGTACGGGAATTT | + |
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Preference number: 5 (lower is better) Translates to: TTEILFGRMDQNAVL*VLLLLSVKPLVREF Trigger: AAATTCCCGTACTAGAGGCTTCACGCTGAGGAGAAGAAGAACCCAAAGTACAGCATTCTGGTCCATCCGGCCAAACAATATTTCTGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS-3UTR CAA 90 bp | TCTGAAAGTGGGTTCAAAACTGTAAGCAGTTCTTTTAACCCTGACCCAGCCCAACGCTATCCACAGTTCTaGAAGAACTCAACTTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SESGFKTVSSSFNPDPAQRYPQF*KNSTFS Trigger: GGAAAAAGTTGAGTTCTTCAAGAACTGTGGATAGCG...TTGGGCTGGGTCAGGGTTAAAAGAACTGCTTACAGTTTTGAACCCACTTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS GCA 72 bp | AGATCCGTACATCTGTTCCAACTTGTGCTCGGCGGCTaGGGCCAGGGCCAGGCTCCGTTTCAGGTGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RSVHLFQLVLGG*GQGQAPFQVLP Trigger: AGGGAGCACCTGAAACGGAGCCTGGCCCTGGCCGCAGCCGCCGAGCACAAGTTGGAACAGATGTACGGATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS GCA 72 bp | GTGCTGGTCACTAACTCTTCTTCGGGCTCTGACATTTaGCGGGATTCAGCCACGGGCTCCGGCTCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VLVTNSSSGSDI*RDSATGSGSGS Trigger: GGAACCGGAGCCGGAGCCCGTGGCTGAATCCCGGCAAATGTCAGAGCCCGAAGAAGAGTTAGTGACCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CAA 90 bp | GCTGCGGCCAGGGCCAGGCTCCGTTTCAGGTGCTCCCTGGAGGCCTaGATGAACTCCTTGAACTCGGGACTATTATTGCCACCAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AAARARLRFRCSLEA*MNSLNSGLLLPPRS Trigger: GCTTCTTGGTGGCAATAATAGTCCCGAGTTCAAGGAGTTCATCAAGGCCTCCAGGGAGCACCTGAAACGGAGCCTGGCCCTGGCCGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 72 bp | CGTCCAGGTAAGTCTTCAGCACTCGGGATTTCCGACTaGCCTGAGAGCTGGGGTACATCCTCAGAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RPGKSSALGISD*PESWGTSSESV Trigger: CACAGACTCTGAGGATGTACCCCAGCTCTCAGGCCAGTCGGAAATCCCGAGTGCTGAAGACTTACCTGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 72 bp | TCTTCAGCACTCGGGATTTCCGACTGGCCTGAGAGCTaGGGTACATCCTCAGAGTCTGTGGAGACATCCATG | + |
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Preference number: 6 (lower is better) Translates to: SSALGISDWPES*GTSSESVETSM Trigger: CATGGATGTCTCCACAGACTCTGAGGATGTACCCCAGCTCTCAGGCCAGTCGGAAATCCCGAGTGCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CAA 72 bp | AGGGCCAGGCTCCGTTTCAGGTGCTCCCTGGAGGCCTaGATGAACTCCTTGAACTCGGGACTATTATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RARLRFRCSLEA*MNSLNSGLLLP Trigger: TGGCAATAATAGTCCCGAGTTCAAGGAGTTCATCAAGGCCTCCAGGGAGCACCTGAAACGGAGCCTGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CAA 90 bp | GCACCTTGGATGCCAATGACCTTGGCTCTGCGCTATCCACAGTTCTaGAAGAACTCAACTTTTTCCCGAGATCCTGCTCCTTGGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: APWMPMTLALRYPQF*KNSTFSRDPAPWWG Trigger: TCCCCACCAAGGAGCAGGATCTCGGGAAAAAGTTGAGTTCTTCAAGAACTGTGGATAGCGCAGAGCCAAGGTCATTGGCATCCAAGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 72 bp | CTGGTGGTCTTTACTGTTACAGTAATACGAGTTGCCTaGGTGTTAGCTGGCTGGGTGGCCATGGATGATATC | + |
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Preference number: 6 (lower is better) Translates to: LVVFTVTVIRVA*VLAGWVAMDDI Trigger: GATATCATCCATGGCCACCCAGCCAGCTAACACCCAGGCAACTCGTATTACTGTAACAGTAAAGACCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CAA 72 bp | GAGTTGTACAGCATATTGATAATCATTTCCATGTCATaGTCTGGGTCGCTGGTACGTCCCTCTGGGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: ELYSILIIISMS*SGSLVRPSGKT Trigger: CGTCTTCCCAGAGGGACGTACCAGCGACCCAGACAATGACATGGAAATGATTATCAATATGCTGTACAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS GCA 72 bp | ACAGTTCTTGAAGAACTCAACTTTTTCCCGAGATCCTaGTCCTTGGTGGGGACACTCATTATGAGGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TVLEELNFFPRS*SLVGTLIMRFC Trigger: ACAGAACCTCATAATGAGTGTCCCCACCAAGGAGCAGGATCTCGGGAAAAAGTTGAGTTCTTCAAGAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CCA 72 bp | CCGTGCGTAAAACAACAGAAATATTGTTTGGCCGGATaGACCAGAATGCTGTACTTTGGGTTCTTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PCVKQQKYCLAG*TRMLYFGFFFS Trigger: GGAGAAGAAGAACCCAAAGTACAGCATTCTGGTCCATCCGGCCAAACAATATTTCTGTTGTTTTACGCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS CAA 72 bp | ATGGTTCCTCCGTGCGTAAAACAACAGAAATATTGTTaGGCCGGATGGACCAGAATGCTGTACTTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: MVPPCVKQQKYC*AGWTRMLYFGF Trigger: GAACCCAAAGTACAGCATTCTGGTCCATCCGGCCAAACAATATTTCTGTTGTTTTACGCACGGAGGAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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| CDS TCA 72 bp | CTTAACAGCTTCTTAATGAGGCTTTGCATTTCTACCTaGTCCACACATAATATTTTTCTCAACTCAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: LNSFLMRLCIST*STHNIFLNSAF Trigger: GAATGCTGAGTTGAGAAAAATATTATGTGTGGATCAGGTAGAAATGCAAAGCCTCATTAAGAAGCTGTTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056949.5 |
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