Pregenerated sensors for SPEM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044084Ensembl transcript IDs: ENSMUST00000056941.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCCAGCCCCGACGGGGTTaGTTGGCATGCGGGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCQPRRG*LACGQE Trigger: TTCCTGCCCGCATGCCAAGCAACCCCGTCGGGGCTG...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGCGCTGGGAGGAGTGTaGGATCATCAGGCCCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPALGGV*DHQARA Trigger: AGCTCGGGCCTGATGATCCCACACTCCTCCCAGCGC...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR GCA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTGGGAGAGTGGCCTGTTaGGAAGTCTCTGCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LFLFIPFSTPCALYTITCGRVAC*EVSAGG Trigger: GCCACCAGCAGAGACTTCGCAACAGGCCACTCTCCC...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCCGAAGTCTCTGCTGGTaGCTGAGGCAGCCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCRSLCW*LRQPCC Trigger: GCAACAGGGCTGCCTCAGCCACCAGCAGAGACTTCG...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGGCCTTGAAGCTGAGGTaGAAGGCGGTGGTAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLSLYSFLHALRLVHDHLALKLR*KAVVAS Trigger: GCTCGCTACCACCGCCTTCCACCTCAGCTTCAAGGC...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTGGGTCCAGGATACAGTaGATGTGGACGTCCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: LFLFIPFSTPCALYTITCGSRIQ*MWTSWT Trigger: CGTCCAGGACGTCCACATCCACTGTATCCTGGACCC...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCTTGCGAAGTCTCTGCTaGTGGCTGAGGCAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCLRSLC*WLRQPC Trigger: ACAGGGCTGCCTCAGCCACCAGCAGAGACTTCGCAA...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTCCCACAGTCCCACATTaGAGGCCAGACGGACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSLFLSPRLAPCTRSPVPTVPH*RPDGLA Trigger: AGCCAGTCCGTCTGGCCTCCAATGTGGGACTGTGGG...AACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCAGGGTAATGGGAGGCTaGCAAGGATTCCACCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCRVMGG*QGFHPG Trigger: GCCAGGGTGGAATCCTTGCCAGCCTCCCATTACCCT...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTCCTCTCTGGGGTTCCTaGGTACAAAGGCAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPPLWGS*VQRQVV Trigger: CACCACCTGCCTTTGTACCCAGGAACCCCAGAGAGG...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | CTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGGCTGGTGGGGCCCTTTaGTATGAAGCCTCACCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSLYSFLHALRLVHDHLLAGGAL*YEASPK Trigger: CTTGGGTGAGGCTTCATACCAAAGGGCCCCACCAGC...CAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTACTTCCGCCAAGCGCTaGGAGGAGTGTGGGATCATC | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPTSAKR*EECGII Trigger: GATGATCCCACACTCCTCCCAGCGCTTGGCGGAAGT...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR TCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGAGGTGGTCAGAGGATaGCGAGAGGGGAAAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPEVVRG*REGKTS Trigger: TGAGGTTTTCCCCTCTCGTCATCCTCTGACCACCTC...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR GCA 90 bp | CTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGGGGCTTTCTTGGTATTaGTCGCAGCACCTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSLYSFLHALRLVHDHLLGLSWY*SQHLRV Trigger: CACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCC...CAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTTTGTCTATGGCATTCTaGAGCCCCTGCCACATCGCG | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPLSMAF*SPCHIA Trigger: CGCGATGTGGCAGGGGCTCCAGAATGCCATAGACAA...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCAGCCTTGGACCTCTCTaGGGTTCCTGGGTACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCSLGPL*GSWVQR Trigger: CCTTTGTACCCAGGAACCCCAGAGAGGTCCAAGGCT...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTGTGGTGGGCTGTGGTTaGGTTGGCTGTGAGTATGAC | + |
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Preference number: 4 (lower is better) Translates to: LFLFIPFSTPCALYTITCVVGCG*VGCEYD Trigger: GTCATACTCACAGCCAACCCAACCACAGCCCACCAC...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCTCCCATGGATTGTGGTaGGCTGTGGTTGGGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: FLFIPFSTPCALYTITCCSHGLW*AVVGLA Trigger: AGCCAACCCAACCACAGCCCACCACAATCCATGGGA...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR TCA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGCCAAATCCGGGACTGTaGATAATGAGGACCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLSLYSFLHALRLVHDHLPNPGL*IMRTEA Trigger: GGCTTCGGTCCTCATTATTCACAGTCCCGGATTTGG...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR TCA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGAGGTATGTGGCCCCCTaGAGGGAAAGAGCTATAACC | + |
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Preference number: 4 (lower is better) Translates to: TLSLYSFLHALRLVHDHLRYVAP*RERAIT Trigger: GGTTATAGCTCTTTCCCTTCAGGGGGCCACATACCT...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCCTCCACTGATCCCTaGCATCATAAGGTATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SFSLFLSPRLAPCTRSPVASTDP*HHKVCG Trigger: GCCACATACCTTATGATGCCAGGGATCAGTGGAGGC...AACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGGGTTGGAGGTGGGGTTaGATCAGAAATCTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TLSLYSFLHALRLVHDHLGWRWG*IRNLDF Trigger: GAAGTCCAGATTTCTGATCCAACCCCACCTCCAACC...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTTGGAACAAAGGTGGTTaGAGGTGGGGTTGGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPWNKGG*RWGWIR Trigger: TCTGATCCAACCCCACCTCCAACCACCTTTGTTCCA...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR TCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTATGTTCTCAGCATCCTaGGGGCTTTCTTGGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPMFSAS*GLSWYC Trigger: GCAATACCAAGAAAGCCCTCAGGATGCTGAGAACAT...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR TCA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGACATCTTGTGGCCTTaGGGTTGTTTACGAAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPDILWP*GCLRKG Trigger: ACCCTTTCGTAAACAACCTCAAGGCCACAAGATGTC...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTAGATCATCTTGTCTATaGCATTCTGGAGCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SFSLFLSPRLAPCTRSPVRSSCL*HSGAPA Trigger: GGCAGGGGCTCCAGAATGCCATAGACAAGATGATCT...AACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGGAACACTGTGTGGGTTaGGCCATCTTCACTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: TLSLYSFLHALRLVHDHLEHCVG*AIFTCT Trigger: TGTACAAGTGAAGATGGCCCAACCCACACAGTGTTC...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTAAGAGGAACACTGTGTaGGTTGGGCCATCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: LFLFIPFSTPCALYTITCKRNTV*VGPSSL Trigger: AAGTGAAGATGGCCCAACCCACACAGTGTTCCTCTT...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTAAAGGTGGTTGGAGGTaGGGTTGGATCAGAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: LFLFIPFSTPCALYTITCKGGWR*GWIRNL Trigger: CAGATTTCTGATCCAACCCCACCTCCAACCACCTTT...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | CCTGGGAGTTGTGGTCCCGGTAGCCTTGGACCTCTCTGGGGTTCCTaGGTACAAAGGCAGGTGGTGGCTCACAGCCTTCTGTCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PGSCGPGSLGPLWGS*VQRQVVAHSLLSRA Trigger: GGCGCGGGACAGAAGGCTGTGAGCCACCACCTGCCTTTGTACCCAGGAACCCCAGAGAGGTCCAAGGCTACCGGGACCACAACTCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | AGCGGCGCAGCTCTGGTGACAGGTAGAGGGAGGGTAATGGGAGGCTaGCAAGGATTCCACCCTGGCGACCCCACAGTCCCACATTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SGAALVTGRGRVMGG*QGFHPGDPTVPHWR Trigger: CCTCCAATGTGGGACTGTGGGGTCGCCAGGGTGGAATCCTTGCCAGCCTCCCATTACCCTCCCTCTACCTGTCACCAGAGCTGCGCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | GTTGGAGGTGGGGTTGGATCAGAAATCTGGACTTCCGCCAAGCGCTaGGAGGAGTGTGGGATCATCAGGCCCGAGCTGGCTGGTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VGGGVGSEIWTSAKR*EECGIIRPELAGGA Trigger: GGCCCCACCAGCCAGCTCGGGCCTGATGATCCCACACTCCTCCCAGCGCTTGGCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS TCA 90 bp | GTGTGGGATCATCAGGCCCGAGCTGGCTGGTGGGGCCCTTTGGTATaGAGCCTCACCCAAGGCCGTAAGGGAGGTAGAGGTGGTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VWDHQARAGWWGPLV*SLTQGRKGGRGGQR Trigger: CCTCTGACCACCTCTACCTCCCTTACGGCCTTGGGTGAGGCTTCATACCAAAGGGCCCCACCAGCCAGCTCGGGCCTGATGATCCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | GAGGAGTGTGGGATCATCAGGCCCGAGCTGGCTGGTGGGGCCCTTTaGTATGAAGCCTCACCCAAGGCCGTAAGGGAGGTAGAGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: EECGIIRPELAGGAL*YEASPKAVREVEVV Trigger: GACCACCTCTACCTCCCTTACGGCCTTGGGTGAGGCTTCATACCAAAGGGCCCCACCAGCCAGCTCGGGCCTGATGATCCCACACTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | GTTTCCCTGTCCGGCTTCTATGCAGAGAGGGCCTTGAAGCTGAGGTaGAAGGCGGTGGTAGCGAGCTGGCCCGCCCTCTGTTCTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VSLSGFYAERALKLR*KAVVASWPALCSPA Trigger: TGCAGGAGAACAGAGGGCGGGCCAGCTCGCTACCACCGCCTTCCACCTCAGCTTCAAGGCCCTCTCTGCATAGAAGCCGGACAGGGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS TCA 90 bp | GGTAGCCACGGGAGAGTGGCCTGTTGCGAAGTCTCTGCTGGTGGCTaGGGCAGCCCTGTTGCTGGCTGCTTTGGTGGATCTGAAGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSHGRVACCEVSAGG*GSPVAGCFGGSEGC Trigger: GCAACCTTCAGATCCACCAAAGCAGCCAGCAACAGGGCTGCCTCAGCCACCAGCAGAGACTTCGCAACAGGCCACTCTCCCGTGGCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | GTGGCCTTGAGGTTGTTTACGAAAGGGTGGGTAGCCACGGGAGAGTaGCCTGTTGCGAAGTCTCTGCTGGTGGCTGAGGCAGCCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VALRLFTKGWVATGE*PVAKSLLVAEAALL Trigger: CAACAGGGCTGCCTCAGCCACCAGCAGAGACTTCGCAACAGGCCACTCTCCCGTGGCTACCCACCCTTTCGTAAACAACCTCAAGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | TGTGTGGGTTGGGCCATCTTCACTTGTACAGGGTCCAGGATACAGTaGATGTGGACGTCCTGGACGTTGGCTGGTTGGGGCTCTTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CVGWAIFTCTGSRIQ*MWTSWTLAGWGSLG Trigger: CCCCAAAGAGCCCCAACCAGCCAACGTCCAGGACGTCCACATCCACTGTATCCTGGACCCTGTACAAGTGAAGATGGCCCAACCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | ACCTGGATTCCGACTGAGTGGAACAAAGGTGGTTGGAGGTGGGGTTaGATCAGAAATCTGGACTTCCGCCAAGCGCTGGGAGGAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TWIPTEWNKGGWRWG*IRNLDFRQALGGVW Trigger: CCACACTCCTCCCAGCGCTTGGCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGTTCCACTCAGTCGGAATCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | GGTGGCATTGCCACCTGGATTCCGACTGAGTGGAACAAAGGTGGTTaGAGGTGGGGTTGGATCAGAAATCTGGACTTCCGCCAAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GGIATWIPTEWNKGG*RWGWIRNLDFRQAL Trigger: CAGCGCTTGGCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGTTCCACTCAGTCGGAATCCAGGTGGCAATGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | CTTCAGCTCCAGGCTGTCATACACCTGGTAGGTGGCATTGCCACCTaGATTCCGACTGAGTGGAACAAAGGTGGTTGGAGGTGGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LQLQAVIHLVGGIAT*IPTEWNKGGWRWGW Trigger: CCAACCCCACCTCCAACCACCTTTGTTCCACTCAGTCGGAATCCAGGTGGCAATGCCACCTACCAGGTGTATGACAGCCTGGAGCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | ATTGCCACCTGGATTCCGACTGAGTGGAACAAAGGTGGTTGGAGGTaGGGTTGGATCAGAAATCTGGACTTCCGCCAAGCGCTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: IATWIPTEWNKGGWR*GWIRNLDFRQALGG Trigger: TCCTCCCAGCGCTTGGCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGTTCCACTCAGTCGGAATCCAGGTGGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGGTGGTCCCGGTAGCCTaGGACCTCTCTGGGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: TLSLYSFLHALRLVHDHLVVPVA*DLSGVP Trigger: AGGAACCCCAGAGAGGTCCAAGGCTACCGGGACCAC...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 90 bp | TTCGTGAGATTCCCGGGAGCTGTAACCCACGTGTCCCATGGATTGTaGTGGGCTGTGGTTGGGTTGGCTGTGAGTATGACTAGAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: FVRFPGAVTHVSHGL*WAVVGLAVSMTREV Trigger: AACTTCTCTAGTCATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGCTCCCGGGAATCTCACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGTGGACGTCCTGGACGTaGGCTGGTTGGGGCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LSLYSFLHALRLVHDHLLWTSWT*AGWGSL Trigger: CAAAGAGCCCCAACCAGCCAACGTCCAGGACGTCCA...CAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGCTGAGGCAGCCCTGTaGCTGGCTGCTTTGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPAEAAL*LAALVD Trigger: ATCCACCAAAGCAGCCAGCAACAGGGCTGCCTCAGC...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCCACGTGTCCCATGGATaGTGGTGGGCTGTGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFIPFSTPCALYTITCCHVSHG*WWAVVG Trigger: CCCAACCACAGCCCACCACAATCCATGGGACACGTG...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | GACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTTATGCAGAGAGGGCCTaGAAGCTGAGGTGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DSFSLFLSPRLAPCTRSPYAERA*KLRWKA Trigger: CGCCTTCCACCTCAGCTTCAAGGCCCTCTCTGCATA...AGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTAGGGCTTTCTTGGTATaGCTCGCAGCACCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLFIPFSTPCALYTITCRAFLV*LAAPQG Trigger: ACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCCT...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGCTGTTGCTGGCTGCTTaGGTGGATCTGAAGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLYSFLHALRLVHDHLLLLAA*VDLKVA Trigger: GGCAACCTTCAGATCCACCAAAGCAGCCAGCAACAG...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTGTGGAACAAAGGTGGTaGGAGGTGGGGTTGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLFIPFSTPCALYTITCVEQRW*EVGLDQ Trigger: CTGATCCAACCCCACCTCCAACCACCTTTGTTCCAC...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGGGAACACTGTGTGGGTaGGGCCATCTTCACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLYSFLHALRLVHDHLGTLCG*GHLHLY Trigger: GTACAAGTGAAGATGGCCCAACCCACACAGTGTTCC...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTGGGCTGTGGTTGGGTaGGCTGTGAGTATGACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLSLYSFLHALRLVHDHLWAVVG*AVSMTR Trigger: TCTAGTCATACTCACAGCCAACCCAACCACAGCCCA...CAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS GCA 90 bp | TGGTTCATCCAAAAGATCATCTTGTCTATGGCATTCTGGAGCCCCTaGCACATCGCGGTTGCCACATTGATGCTGATGTTGACCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: WFIQKIILSMAFWSP*HIAVATLMLMLTRM Trigger: CATTCTGGTCAACATCAGCATCAATGTGGCAACCGCGATGTGGCAGGGGCTCCAGAATGCCATAGACAAGATGATCTTTTGGATGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGCATCGCGGTTGCCACATaGATGCTGATGTTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLFIPFSTPCALYTITCCIAVAT*MLMLTR Trigger: TCTGGTCAACATCAGCATCAATGTGGCAACCGCGAT...GCAACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTGGTTGGAGGTGGGGTaGGATCAGAAATCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLFIPFSTPCALYTITCWLEVG*DQKSGL Trigger: AAGTCCAGATTTCTGATCCAACCCCACCTCCAACCA...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTTTTGGGCCATCTTCACTaGTACAGGGTCCAGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: SFSLFLSPRLAPCTRSPVLGHLH*YRVQDT Trigger: TGTATCCTGGACCCTGTACAAGTGAAGATGGCCCAA...AACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTCTTTATTCCTTTCTCCACGCCTTGCGCCTTGTACACGATCACCTGTATCCAAAAGATCATCTaGTCTATGGCATTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFIPFSTPCALYTITCIQKII*SMAFWS Trigger: GCTCCAGAATGCCATAGACAAGATGATCTTTTGGAT...ACAGGTGATCGTGTACAAGGCGCAAGGCGTGGAGAAAGGAATAAAGAGAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS GCA 72 bp | AGCAGCCGGCGGGGAGGAGGTGGTGATGAGGCCCACTaGTCAGCTTCCACGGTACCCCAAATCCGGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRRGGGGDEAH*SASTVPQIRDC Trigger: ACAGTCCCGGATTTGGGGTACCGTGGAAGCTGAGCAGTGGGCCTCATCACCACCTCCTCCCCGCCGGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS GCA 72 bp | GGCGGTGGTAGCGAGCTGGCCCGCCCTCTGTTCTCCTaGACCTGCCTCTTCAGCTCCAGGCTGTCATACACC | + |
|
Preference number: 6 (lower is better) Translates to: GGGSELARPLFS*TCLFSSRLSYT Trigger: GGTGTATGACAGCCTGGAGCTGAAGAGGCAGGTGCAGGAGAACAGAGGGCGGGCCAGCTCGCTACCACCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | AGGGAGGGTAATGGGAGGCTGGCAAGGATTCCACCCTaGCGACCCCACAGTCCCACATTGGAGGCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: REGNGRLARIPP*RPHSPTLEARR Trigger: CCGTCTGGCCTCCAATGTGGGACTGTGGGGTCGCCAGGGTGGAATCCTTGCCAGCCTCCCATTACCCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | AGCGCTGGGAGGAGTGTGGGATCATCAGGCCCGAGCTaGCTGGTGGGGCCCTTTGGTATGAAGCCTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SAGRSVGSSGPS*LVGPFGMKPHP Trigger: TGGGTGAGGCTTCATACCAAAGGGCCCCACCAGCCAGCTCGGGCCTGATGATCCCACACTCCTCCCAGCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | AGAAATCTGGACTTCCGCCAAGCGCTGGGAGGAGTGTaGGATCATCAGGCCCGAGCTGGCTGGTGGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNLDFRQALGGV*DHQARAGWWGP Trigger: AGGGCCCCACCAGCCAGCTCGGGCCTGATGATCCCACACTCCTCCCAGCGCTTGGCGGAAGTCCAGATTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | TCCGGCTTCTATGCAGAGAGGGCCTTGAAGCTGAGGTaGAAGGCGGTGGTAGCGAGCTGGCCCGCCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGFYAERALKLR*KAVVASWPALC Trigger: ACAGAGGGCGGGCCAGCTCGCTACCACCGCCTTCCACCTCAGCTTCAAGGCCCTCTCTGCATAGAAGCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 90 bp | GCGAAGTCTCTGCTGGTGGCTGAGGCAGCCCTGTTGCTGGCTGCTTaGGTGGATCTGAAGGTTGCCCTGTTGGTAGCCGTAGCGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AKSLLVAEAALLLAA*VDLKVALLVAVAPA Trigger: CGCAGGCGCTACGGCTACCAACAGGGCAACCTTCAGATCCACCAAAGCAGCCAGCAACAGGGCTGCCTCAGCCACCAGCAGAGACTTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 90 bp | AGAGAAGTTCTGCCGGTGGGCCTGGGAGTTGTGGTCCCGGTAGCCTaGGACCTCTCTGGGGTTCCTGGGTACAAAGGCAGGTGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: REVLPVGLGVVVPVA*DLSGVPGYKGRWWL Trigger: GAGCCACCACCTGCCTTTGTACCCAGGAACCCCAGAGAGGTCCAAGGCTACCGGGACCACAACTCCCAGGCCCACCGGCAGAACTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS TCA 72 bp | CATCAGGCCCGAGCTGGCTGGTGGGGCCCTTTGGTATaGAGCCTCACCCAAGGCCGTAAGGGAGGTAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HQARAGWWGPLV*SLTQGRKGGRG Trigger: ACCTCTACCTCCCTTACGGCCTTGGGTGAGGCTTCATACCAAAGGGCCCCACCAGCCAGCTCGGGCCTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | TTGGACCTCTCTGGGGTTCCTGGGTACAAAGGCAGGTaGTGGCTCACAGCCTTCTGTCCCGCGCCTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LDLSGVPGYKGR*WLTAFCPAPPL Trigger: CAGTGGAGGCGCGGGACAGAAGGCTGTGAGCCACCACCTGCCTTTGTACCCAGGAACCCCAGAGAGGTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | GGGATCATCAGGCCCGAGCTGGCTGGTGGGGCCCTTTaGTATGAAGCCTCACCCAAGGCCGTAAGGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GIIRPELAGGAL*YEASPKAVREV Trigger: TACCTCCCTTACGGCCTTGGGTGAGGCTTCATACCAAAGGGCCCCACCAGCCAGCTCGGGCCTGATGATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | TGTGGTCCCGGTAGCCTTGGACCTCTCTGGGGTTCCTaGGTACAAAGGCAGGTGGTGGCTCACAGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGPGSLGPLWGS*VQRQVVAHSLL Trigger: CAGAAGGCTGTGAGCCACCACCTGCCTTTGTACCCAGGAACCCCAGAGAGGTCCAAGGCTACCGGGACCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 90 bp | GAGTGGCCTGTTGCGAAGTCTCTGCTGGTGGCTGAGGCAGCCCTGTaGCTGGCTGCTTTGGTGGATCTGAAGGTTGCCCTGTTGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EWPVAKSLLVAEAAL*LAALVDLKVALLVA Trigger: GGCTACCAACAGGGCAACCTTCAGATCCACCAAAGCAGCCAGCAACAGGGCTGCCTCAGCCACCAGCAGAGACTTCGCAACAGGCCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | GCTCACAGCCTTCTGTCCCGCGCCTCCACTGATCCCTaGCATCATAAGGTATGTGGCCCCCTGAAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AHSLLSRASTDP*HHKVCGPLKGK Trigger: CTTTCCCTTCAGGGGGCCACATACCTTATGATGCCAGGGATCAGTGGAGGCGCGGGACAGAAGGCTGTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | CGTGAGATTCCCGGGAGCTGTAACCCACGTGTCCCATaGATTGTGGTGGGCTGTGGTTGGGTTGGCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: REIPGSCNPRVP*IVVGCGWVGCE Trigger: CTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGCTCCCGGGAATCTCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 72 bp | CTGCTGGTGGCTGAGGCAGCCCTGTTGCTGGCTGCTTaGGTGGATCTGAAGGTTGCCCTGTTGGTAGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLVAEAALLLAA*VDLKVALLVAV Trigger: TACGGCTACCAACAGGGCAACCTTCAGATCCACCAAAGCAGCCAGCAACAGGGCTGCCTCAGCCACCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 90 bp | GCTGTAACCCACGTGTCCCATGGATTGTGGTGGGCTGTGGTTGGGTaGGCTGTGAGTATGACTAGAGAAGTTCTGCCGGTGGGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVTHVSHGLWWAVVG*AVSMTREVLPVGLG Trigger: TCCCAGGCCCACCGGCAGAACTTCTCTAGTCATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | AGGTTGTTTACGAAAGGGTGGGTAGCCACGGGAGAGTaGCCTGTTGCGAAGTCTCTGCTGGTGGCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLFTKGWVATGE*PVAKSLLVAEA Trigger: TGCCTCAGCCACCAGCAGAGACTTCGCAACAGGCCACTCTCCCGTGGCTACCCACCCTTTCGTAAACAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | CCGGGAGCTGTAACCCACGTGTCCCATGGATTGTGGTaGGCTGTGGTTGGGTTGGCTGTGAGTATGACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGAVTHVSHGLW*AVVGLAVSMTR Trigger: TCTAGTCATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGCTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | ACAAAGGTGGTTGGAGGTGGGGTTGGATCAGAAATCTaGACTTCCGCCAAGCGCTGGGAGGAGTGTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TKVVGGGVGSEI*TSAKRWEECGI Trigger: GATCCCACACTCCTCCCAGCGCTTGGCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 72 bp | GCATTCTGGAGCCCCTGCCACATCGCGGTTGCCACATaGATGCTGATGTTGACCAGAATGATGAGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AFWSPCHIAVAT*MLMLTRMMRPS Trigger: GCTGGGCCTCATCATTCTGGTCAACATCAGCATCAATGTGGCAACCGCGATGTGGCAGGGGCTCCAGAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 72 bp | AGATTCCCGGGAGCTGTAACCCACGTGTCCCATGGATaGTGGTGGGCTGTGGTTGGGTTGGCTGTGAGTATG | + |
|
Preference number: 6 (lower is better) Translates to: RFPGAVTHVSHG*WWAVVGLAVSM Trigger: CATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGCTCCCGGGAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 90 bp | GCCCAGCAGCAGGAACAAGATGTTCTCAGCATCCTGAGGGCTTTCTaGGTATTGCTCGCAGCACCTCAGGGTGTTCTGCCACAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AQQQEQDVLSILRAF*VLLAAPQGVLPQLV Trigger: AACCAGCTGTGGCAGAACACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCCTCAGGATGCTGAGAACATCTTGTTCCTGCTGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CCA 72 bp | GCCACCTGGATTCCGACTGAGTGGAACAAAGGTGGTTaGAGGTGGGGTTGGATCAGAAATCTGGACTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ATWIPTEWNKGG*RWGWIRNLDFR Trigger: GCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGTTCCACTCAGTCGGAATCCAGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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| CDS CAA 72 bp | CACGTGTCCCATGGATTGTGGTGGGCTGTGGTTGGGTaGGCTGTGAGTATGACTAGAGAAGTTCTGCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVSHGLWWAVVG*AVSMTREVLPV Trigger: CACCGGCAGAACTTCTCTAGTCATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 90 bp | GACTTCGTGAGATTCCCGGGAGCTGTAACCCACGTGTCCCATGGATaGTGGTGGGCTGTGGTTGGGTTGGCTGTGAGTATGACTAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DFVRFPGAVTHVSHG*WWAVVGLAVSMTRE Trigger: TTCTCTAGTCATACTCACAGCCAACCCAACCACAGCCCACCACAATCCATGGGACACGTGGGTTACAGCTCCCGGGAATCTCACGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | ATCTTCACTTGTACAGGGTCCAGGATACAGTGGATGTaGACGTCCTGGACGTTGGCTGGTTGGGGCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFTCTGSRIQWM*TSWTLAGWGSL Trigger: CAAAGAGCCCCAACCAGCCAACGTCCAGGACGTCCACATCCACTGTATCCTGGACCCTGTACAAGTGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 72 bp | CAAGATGTTCTCAGCATCCTGAGGGCTTTCTTGGTATaGCTCGCAGCACCTCAGGGTGTTCTGCCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDVLSILRAFLV*LAAPQGVLPQL Trigger: CAGCTGTGGCAGAACACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCCTCAGGATGCTGAGAACATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 72 bp | CAGGAACAAGATGTTCTCAGCATCCTGAGGGCTTTCTaGGTATTGCTCGCAGCACCTCAGGGTGTTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QEQDVLSILRAF*VLLAAPQGVLP Trigger: TGGCAGAACACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCCTCAGGATGCTGAGAACATCTTGTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CAA 90 bp | CAGCAGGAACAAGATGTTCTCAGCATCCTGAGGGCTTTCTTGGTATaGCTCGCAGCACCTCAGGGTGTTCTGCCACAGCTGGTTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QQEQDVLSILRAFLV*LAAPQGVLPQLVFH Trigger: ATGGAAAACCAGCTGTGGCAGAACACCCTGAGGTGCTGCGAGCAATACCAAGAAAGCCCTCAGGATGCTGAGAACATCTTGTTCCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS GCA 72 bp | CAAAAGATCATCTTGTCTATGGCATTCTGGAGCCCCTaGCACATCGCGGTTGCCACATTGATGCTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QKIILSMAFWSP*HIAVATLMLML Trigger: CAACATCAGCATCAATGTGGCAACCGCGATGTGGCAGGGGCTCCAGAATGCCATAGACAAGATGATCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
||
| CDS CCA 72 bp | TGGTTCATCCAAAAGATCATCTTGTCTATGGCATTCTaGAGCCCCTGCCACATCGCGGTTGCCACATTGATG | + |
|
Preference number: 6 (lower is better) Translates to: WFIQKIILSMAF*SPCHIAVATLM Trigger: CATCAATGTGGCAACCGCGATGTGGCAGGGGCTCCAGAATGCCATAGACAAGATGATCTTTTGGATGAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056941.3 |
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