Pregenerated sensors for SPEF1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073795Ensembl transcript IDs: ENSMUST00000097970.9, ENSMUST00000121412.2, ENSMUST00000209335.2, ENSMUST00000210254.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCCAGCTCTaGTGCTCCTCGGGTCCAGTTCTCATCAGCTCCCAGATCCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QDRGLSDSGWGLLQL*CSSGPVLISSQIRW Trigger: CCAGCGGATCTGGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| 3UTR CCA 90 bp | GGTCAGGGCCCTGCACTCCCTATACTGCCCTCACTGGGCCAGTGCTaGCTCTTCAGAAACTCAGCCAAGGAGTGTGAAGCTGGGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: GQGPALPILPSLGQC*LFRNSAKECEAGAV Trigger: CACTGCCCCAGCTTCACACTCCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAGTATAGGGAGTGCAGGGCCCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR CCA 90 bp | ATTTCTAAAGAATCTAAAGAATGTCTAAAGAATGTTGACTCTCTCTaGTCAGGGCCCTGCACTCCCTATACTGCCCTCACTGGGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ISKESKECLKNVDSL*SGPCTPYTALTGPV Trigger: CACTGGCCCAGTGAGGGCAGTATAGGGAGTGCAGGGCCCTGACCAGAGAGAGTCAACATTCTTTAGACATTCTTTAGATTCTTTAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR-3UTR TCA 90 bp | AACGCTAGACTGGACTCAGATTCACAGACATCCATCTGCCTCTGCCTCCCGAGTCTCAGCCAAGGAGTGTaGAGCTGGGGCAGTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NARLDSDSQTSICLCLPSLSQGV*SWGSGS Trigger: GGACCCACTGCCCCAGCTTCACACTCCTTGGCTGAG...ACTCGGGAGGCAGAGGCAGATGGATGTCTGTGAATCTGAGTCCAGTCTAGCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTATACTGCCCTCACTGGGCCAGTGCTGGCTCTTCAGAAACTCAGCCAAGGAGTCCCTCTGCATCCTTaGAGCTCAGAATCTCCGGGA | + |
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Preference number: 2 (lower is better) Translates to: PYTALTGPVLALQKLSQGVPLHP*SSESPG Trigger: TCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGAC...TCCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAGTATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTATACTGCCCTCACTGGGCCAGTGCTGGCTCTTCAGAAACTCAGCCAAGGAAGTAGGACCATACCTTaGCCGTCTCCTGCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: PYTALTGPVLALQKLSQGSRTIP*PSPAEW Trigger: CCATTCTGCAGGAGACGGTCAAGGTATGGTCCTACT...TCCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAGTATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACTCAGATTCACAGACATCCATCTGCCTCTGCCTCCCGAGTGCTGGGATTACCCTCACTGGGCCAGTaGTGGCTCTTCAGAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: WTQIHRHPSASASRVLGLPSLGQ*WLFRNS Trigger: TGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGG...TAATCCCAGCACTCGGGAGGCAGAGGCAGATGGATGTCTGTGAATCTGAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCTCAACTGCAAAATCTTaGCCGTCTCCTGCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: PVLISSQIRWSFSCTRCSSTAKS*PSPAEW Trigger: CCATTCTGCAGGAGACGGTCAAGATTTTGCAGTTGA...GGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGTCCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTCTCATCACCTTCAACTaGAAAATCTTGACCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RVQFSSAPRSAGPSAVPGLITFN*KILTVS Trigger: GGAGACGGTCAAGATTTTGCAGTTGAAGGTGATGAG...ACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGGACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| 3UTR TCA 72 bp | GGTCTGAGTGACTCTGGGTGGGGCCTCCTCCAGCTCTaGTGCTCCTCGGGTCCAGTTCTCATCAGCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLSDSGWGLLQL*CSSGPVLISSQ Trigger: CTGGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCCACCCAGAGTCACTCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| 3UTR CCA 72 bp | CTGGTCAGGGCCCTGCACTCCCTATACTGCCCTCACTaGGCCAGTGCTGGCTCTTCAGAAACTCAGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LVRALHSLYCPH*ASAGSSETQPR Trigger: CCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAGTATAGGGAGTGCAGGGCCCTGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR GCA 72 bp | TTGGGAGAACCAAACTCAAATCTGTCCAAACTCGTCTaGGGCCCCAGCGTGCTCTGGCCTCCACACCTCACG | + |
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Preference number: 3 (lower is better) Translates to: LGEPNSNLSKLV*GPSVLWPPHLT Trigger: CGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTGGTTCTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| 3UTR CCA 72 bp | CCTGCACTCCCTATACTGCCCTCACTGGGCCAGTGCTaGCTCTTCAGAAACTCAGCCAAGGAGTGTGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: PALPILPSLGQC*LFRNSAKECEA Trigger: AGCTTCACACTCCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAGTATAGGGAGTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR CCA 72 bp | CACAAATGCAGTAAATCAATGATGATGACACGATATTaGGGGGTTGGGAGAACCAAACTCAAATCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: HKCSKSMMMTRY*GVGRTKLKSVQ Trigger: TTGGACAGATTTGAGTTTGGTTCTCCCAACCCCCCAATATCGTGTCATCATCATTGATTTACTGCATTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGGTCAGGGCCCTGCACTCCCTATACTGCCCTCACTGGGCCAGTGCTGGGCGCTTGGGGCGGCTaGGTGGGAGCCGGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLWSGPCTPYTALTGPVLGAWGG*VGAGPA Trigger: GGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCC...CAGCACTGGCCCAGTGAGGGCAGTATAGGGAGTGCAGGGCCCTGACCAGAGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | GGGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTCCCAGAGGCGCTTGGGGCGGCTaGGTGGGAGCCGGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GASSSSDAPRVQFSSAPRGAWGG*VGAGPA Trigger: GGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCC...TCTGGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | TCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCGGCGCTTGGGGCGGCTaGGTGGGAGCCGGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SNLSKLVCGPSVLWPPHLGAWGG*VGAGPA Trigger: GGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCC...GAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | AGCTCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCCTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSGWAQDRGLSDSGWGLLLGAAE*EPVQPG Trigger: GCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAG...GAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAGGCGCTTGGGGCGGCTaGGTGGGAGCCGGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QFSSAPRSAGPSAVPGVPGAWGG*VGAGPA Trigger: GGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCC...TGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | CCAAACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PNSNLSKLVCGPSVLWPPLGAAE*EPVQPG Trigger: GCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAG...TGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR GCA 90 bp | TGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCTCTGAAGGATCTTCGTaGTGGAGGGGGCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: CPNSSAAPACSGLHTSRLSEGSS*WRGLEG Trigger: GCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGA...GAGACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR GCA 90 bp | GGTGGGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTCCCTCTGAAGGATCTTCGTaGTGGAGGGGGCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGASSSSDAPRVQFSSAPSEGSS*WRGLEG Trigger: GCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGA...GGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGACTCAGATTCACAGACATCCATCTGCCTCTGCCTCCCGAGTGCTGGGCTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RLDSDSQTSICLCLPSAGLGAAE*EPVQPG Trigger: GCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAG...CCCAGCACTCGGGAGGCAGAGGCAGATGGATGTCTGTGAATCTGAGTCCAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTGGATCGAGGTCTGAGTaGCTCTGGGTGGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKSVQTRLRPQRALASTPGSRSE*LWVGPP Trigger: AGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCC...AGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | TCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCACTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSAPRSAGPSAVPGVPTSLGAAE*EPVQPG Trigger: GCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAG...TGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | TCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCCAGGTCCCAGAGGGGTTCTaGCAAGCTGCTGTTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGWAQDRGLSDSGWGLLQVPEGF*QAAVIH Trigger: GTGGATAACAGCAGCTTGTCAGAACCCCTCTGGGAC...CTGGAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCAGTGGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGTCTGAAGGATCTTCGTaGTGGAGGGGGCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WGSGSLCILAAQNLREARSEGSS*WRGLEG Trigger: GCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGA...CCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCCACTGCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | AACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCACATGGTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: NSSAAPACSGLHTSRLTWWMLTR*SQSPSI Trigger: AATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCA...CCATGTGAGACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCGTCCCAGAGGGGTTCTaGCAAGCTGCTGTTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: TQICPNSSAAPACSGLHTVPEGF*QAAVIH Trigger: GTGGATAACAGCAGCTTGTCAGAACCCCTCTGGGAC...GGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | TCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCCAGTTGCTCAGCTTCTaGTCTGTACTGCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SNLSKLVCGPSVLWPPHLQLLSF*SVLQAG Trigger: CCCAGCCTGCAGTACAGACCAGAAGCTGAGCAACTG...GAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | CCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCACACTACATGAACAGTCCTaGCCTCCATCTTCTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PNSSAAPACSGLHTSRLTLHEQS*PPSSPS Trigger: TGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAG...TGTGAGACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | AACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCACATGGCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: NSSAAPACSGLHTSRLTWHLRGM*VGGKIP Trigger: CGGGATCTTACCCCCAACCCACATACCTCTAAGATG...CCATGTGAGACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTCCCCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: GGASSSSDAPRVQFSSAPHLRGM*VGGKIP Trigger: CGGGATCTTACCCCCAACCCACATACCTCTAAGATG...GGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCTCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSSGWAQDRGLSDSGWGLHLRGM*VGGKIP Trigger: CGGGATCTTACCCCCAACCCACATACCTCTAAGATG...GAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGAGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | GGCAGTGGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATGTCCCAGAGGGGTTCTaGCAAGCTGCTGTTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSGSLCILAAQNLREARDVPEGF*QAAVIH Trigger: GTGGATAACAGCAGCTTGTCAGAACCCCTCTGGGAC...ATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCCACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR CCA 90 bp | ATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCCGTCTCCTGCAGAATaGCTAGTGCTTGCTCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: ICPNSSAAPACSGLHTSRPSPAE*LVLAPY Trigger: ATAAGGAGCAAGCACTAGCCATTCTGCAGGAGACGG...ACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | GGTCCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTGTCCCAGAGGGGTTCTaGCAAGCTGCTGTTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPVLISSQIRWSFSCTRCVPEGF*QAAVIH Trigger: GTGGATAACAGCAGCTTGTCAGAACCCCTCTGGGAC...ACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | AGTGTGAAGCTGGGGCAGTGGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: SVKLGQWVPLHPCSSESPWMLTR*SQSPSI Trigger: AATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCA...CGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCCACTGCCCCAGCTTCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTGGGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTGTCCCTGCCTTCTTTTaGAGGTTTGGGAGTTCAACA | + |
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Preference number: 4 (lower is better) Translates to: LGGASSSSDAPRVQFSSAVPAFF*RFGSST Trigger: TGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGGAC...AGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCCACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| CDS-3UTR CCA 90 bp | GGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATGCCCAGCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: GSLCILAAQNLREARDAQHLRGM*VGGKIP Trigger: CGGGATCTTACCCCCAACCCACATACCTCTAAGATG...CTGGGCATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTGAAAGACTTTCCTGTTaGGAAGGCTCCAGTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LKSVQTRLRPQRALASTPERLSC*EGSSCS Trigger: TGAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTC...AGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | ACCAAACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCATCAGCTGTACCAGCTaGGCCTACATGAACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TKLKSVQTRLRPQRALASISCTS*AYMNSP Trigger: AGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGAT...GGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | TCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCAGGCCTGCCTTCTTTTaGAGGTTTGGGAGTTCAACA | + |
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Preference number: 4 (lower is better) Translates to: SNLSKLVCGPSVLWPPHLRPAFF*RFGSST Trigger: TGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGCCT...GAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | TCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCTCAACTGCAAAATCTTaGCCGTCTCCTGCAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: SNLSKLVCGPSVLWPPHLSTAKS*PSPAEW Trigger: CCATTCTGCAGGAGACGGTCAAGATTTTGCAGTTGA...GAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR GCA 90 bp | ATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCATCACCTTCAACTaGAAAATCTTGACCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ICPNSSAAPACSGLHTSRLITFN*KILTVS Trigger: GGAGACGGTCAAGATTTTGCAGTTGAAGGTGATGAG...ACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCACTGGGCCAGTGCTGGCTCTTCAGAAACTCAGCCAAGGAGTGTGAAATCAGCTGTACCAGCTaGGCCTACATGAACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLGQCWLFRNSAKECEISCTS*AYMNSP Trigger: AGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGAT...TTCACACTCCTTGGCTGAGTTTCTGAAGAGCCAGCACTGGCCCAGTGAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCATCATGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SAPRSAGPSAVPGVPTSSWMLTR*SQSPSI Trigger: AATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCA...TGATGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| CDS-3UTR CCA 90 bp | TCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCCAGCTTCTTTTGAAGGTTTaGGAGTTCAACATCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGWAQDRGLSDSGWGLLQLLLKV*EFNIMD Trigger: GTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAG...CTGGAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCATCAATCAGCTGTACCAGCTaGGCCTACATGAACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAPRSAGPSAVPGVPTSSISCTS*AYMNSP Trigger: AGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGAT...TGATGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCACTACATGAACAGTCCTaGCCTCCATCTTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QFSSAPRSAGPSAVPGVPLHEQS*PPSSPS Trigger: TGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAG...TGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | CATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCATCTACATGAACAGTCCTaGCCTCCATCTTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQLPDPLVLQLYQVFQPHLHEQS*PPSSPS Trigger: TGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAG...ATGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAAGGCCTGCCTTCTTTTaGAGGTTTGGGAGTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFSSAPRSAGPSAVPGVPRPAFF*RFGSST Trigger: TGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGCCT...TGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS-3UTR CCA 90 bp | TGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTCTCTTGGATACCACCCTTTaGATATCATTATCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: CPNSSAAPACSGLHTSRLLDTTL*ISLSEI Trigger: TATCTCAGATAATGATATCCAAAGGGTGGTATCCAA...GAGACGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | AGCTCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCTTGGATACCACCCTTTaGATATCATTATCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGWAQDRGLSDSGWGLLLDTTL*ISLSEI Trigger: TATCTCAGATAATGATATCCAAAGGGTGGTATCCAA...GAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCTTCTTTTGAAGGTTTaGGAGTTCAACATCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSVQTRLRPQRALASTPLLLKV*EFNIMD Trigger: GTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAG...AGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR TCA 90 bp | GGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATGCCCAGTTGGATATCATTATCTaGGATACACAAGTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLCILAAQNLREARDAQLDIII*DTQVQL Trigger: AAGCTGCACTTGTGTATCTCAGATAATGATATCCAA...CTGGGCATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTGGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATCTTCTTTTGAAGGTTTaGGAGTTCAACATCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLCILAAQNLREARDLLLKV*EFNIMD Trigger: GTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAG...ATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCCACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR TCA 90 bp | CAAACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACTTGGATATCATTATCTaGGATACACAAGTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTQICPNSSAAPACSGLHLDIII*DTQVQL Trigger: AAGCTGCACTTGTGTATCTCAGATAATGATATCCAA...GTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGTGGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGTTGGATACCACCCTTTaGATATCATTATCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: WGSGSLCILAAQNLREARLDTTL*ISLSEI Trigger: TATCTCAGATAATGATATCCAAAGGGTGGTATCCAA...CCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCCACTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCTTGGATATCATTATCTaGGATACACAAGTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLISSQIRWSFSCTRCSLDIII*DTQVQL Trigger: AAGCTGCACTTGTGTATCTCAGATAATGATATCCAA...GGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | GGTCCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTTGGATATCATTATCTaGGATACACAAGTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPVLISSQIRWSFSCTRCLDIII*DTQVQL Trigger: AAGCTGCACTTGTGTATCTCAGATAATGATATCCAA...ACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS-3UTR CCA 90 bp | GAATGTCTAAAGAATGTTGACTCTCTCTGGTCAGGGCCCTGCACTCCCTATACTCTACATGAACAGTCCTaGCCTCCATCTTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ECLKNVDSLWSGPCTPYTLHEQS*PPSSPS Trigger: TGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAG...AGTATAGGGAGTGCAGGGCCCTGACCAGAGAGAGTCAACATTCTTTAGACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCACTTCTTTTGAAGGTTTaGGAGTTCAACATCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFSSAPRSAGPSAVPGVPLLLKV*EFNIMD Trigger: GTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAG...TGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCATCACTTGGATACCACCCTTTaGATATCATTATCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QLPDPLVLQLYQVFQPHHLDTTL*ISLSEI Trigger: TATCTCAGATAATGATATCCAAAGGGTGGTATCCAA...GTGATGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGTCCTGGAATTCACTCTGAACGCTAGACTGGACTCAGATTCACAGACAAGGCCTGCCTTCTTTTaGAGGTTTGGGAGTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTVLEFTLNARLDSDSQTRPAFF*RFGSST Trigger: TGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGCCT...TGTCTGTGAATCTGAGTCCAGTCTAGCGTTCAGAGTGAATTCCAGGACAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| 3UTR CAA 72 bp | CTTCAAAGTTTCAAGACAGGGTTTCTCTCGGTAGCCTaGACTGTCCTGGAATTCACTCTGAACGCTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSFKTGFLSVA*TVLEFTLNARL Trigger: CAGTCTAGCGTTCAGAGTGAATTCCAGGACAGTCAAGGCTACCGAGAGAAACCCTGTCTTGAAACTTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS-3UTR CAA 90 bp | TCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCCGAGCCAAGTGGCGCTaGGGGCGGCTGAGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLSKLVCGPSVLWPPHLRAKWR*GRLSGS Trigger: GCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCG...GAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CAA 90 bp | GGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTCCCAGATCGAGCCAAGTGGCGCTaGGGGCGGCTGAGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPPALMLLGSSSHQLPDRAKWR*GRLSGS Trigger: GCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCG...ATCTGGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CAA 90 bp | TCGGGTCCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGCGAGCCAAGTGGCGCTaGGGGCGGCTGAGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGPVLISSQIRWSFSCTRRAKWR*GRLSGS Trigger: GCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCG...CCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGGACCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CCA 90 bp | ACCATCACTGAAGTCCCGAGCCAAGTGGCGCTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGCGCAGAGGTTATGAATATCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TITEVPSQVALGAAE*EPVQPGAEVMNIPR Trigger: CCTGGGGATATTCATAACCTCTGCGCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCGGGACTTCAGTGATGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CAA 90 bp | TGGACTCAGATTCACAGACATCCATCTGCCTCTGCCTCCCGAGTGCTGGGATTACGAGCCAAGTGGCGCTaGGGGCGGCTGAGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WTQIHRHPSASASRVLGLRAKWR*GRLSGS Trigger: GCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCG...TAATCCCAGCACTCGGGAGGCAGAGGCAGATGGATGTCTGTGAATCTGAGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS CCA 90 bp | GTTGAGAAGGCTCCAGTTGCTCAGCTTCTGGTCTGTACTGCAGGCTaGGACGTAGCTGTGCAAGTCCACCAGCCGAGGGCGGAAGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VEKAPVAQLLVCTAG*DVAVQVHQPRAEVL Trigger: AAGCACTTCCGCCCTCGGCTGGTGGACTTGCACAGCTACGTCCCAGCCTGCAGTACAGACCAGAAGCTGAGCAACTGGAGCCTTCTCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CAA 90 bp | TCCGGTTGGGCTCAGGATCGAGGTCTGAGTGACTCTGGGTGGGGCCTCCTCCAGAGTCCCTGCCTTCTTTaGAAGGTTTGGGAGTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGWAQDRGLSDSGWGLLQSPCLL*KVWEFN Trigger: GTTGAACTCCCAAACCTTCAAAAGAAGGCAGGGACT...CTGGAGGAGGCCCCACCCAGAGTCACTCAGACCTCGATCCTGAGCCCAACCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| CDS TCA 90 bp | TCGGACAGCATCCACAGCAGAGTGTCTTGGATCAGCTGTACCAGCTaGGCCTACATGAACAGTCCTGGCCTCCATCTTCTCCCTCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SDSIHSRVSWISCTS*AYMNSPGLHLLPQC Trigger: GCACTGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGATCCAAGACACTCTGCTGTGGATGCTGTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS TCA 90 bp | TTCGTGCTGGAGGGGGCTGGAGGGCTCTGTAGGCCTGCCTTCTTTTaGAGGTTTGGGAGTTCAACATCATGGACCCAGCTTTCGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FVLEGAGGLCRPAFF*RFGSSTSWTQLSGT Trigger: TGTTCCCGAAAGCTGGGTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGCCTACAGAGCCCTCCAGCCCCCTCCAGCACGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000210254.2 |
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| CDS TCA 90 bp | GAATGGCTAGTGCTTGCTCCTTATCCTCCAGCTGCTGCTGGATGCTaGCCAGGTGATCCCAGAGCCCTTCAATTGAGTCCCCTCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EWLVLAPYPPAAAGC*PGDPRALQLSPLCK Trigger: CTTGCAGAGGGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGAGCAAGCACTAGCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCATTGAGAAGGCTCCAGTaGCTCAGCTTCTGGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PNSNLSKLVCGPSVLWPPLRRLQ*LSFWSV Trigger: TACAGACCAGAAGCTGAGCAACTGGAGCCTTCTCAA...TGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CAA 90 bp | CAAACTCAAATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACCGAAAGACTTTCCTGTaGAGAAGGCTCCAGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTQICPNSSAAPACSGLHRKTFL*RRLQLL Trigger: GAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCG...GTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATTTGAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS-3UTR CAA 90 bp | CATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCATGTGGGCGGGGAGAATTaGAGAGATAAAGGTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HQLPDPLVLQLYQVFQPHVGGEN*RDKGPP Trigger: GGGTGGACCTTTATCTCTCAAATTCTCCCCGCCCAC...ATGAGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS TCA 90 bp | AGTGCTTGCTCCTTATCCTCCAGCTGCTGCTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATTGAGTCCAGCAGCCCATTTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SACSLSSSCCWMLTR*SQSPSIESSSPFSP Trigger: TGGAGAAAATGGGCTGCTGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGAGCAAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS CCA 90 bp | CAAGCTGCTGTTATCCACATCAGGATCTTGCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCGCCAGGGTCGGACAGCATCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QAAVIHIRILHLRGM*VGGKIPPGSDSIHS Trigger: GCTGTGGATGCTGTCCGACCCTGGCGGGATCTTACCCCCAACCCACATACCTCTAAGATGCAAGATCCTGATGTGGATAACAGCAGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTCGAAAGACTTTCCTGTaGAGAAGGCTCCAGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPVLISSQIRWSFSCTRCRKTFL*RRLQLL Trigger: GAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCG...ACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATGCCCAGTAGGACCATACCTTCGAAAGACTTTCCTGTaGAGAAGGCTCCAGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCSSESPGSKGCPVGPYLRKTFL*RRLQLL Trigger: GAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCG...AAGGTATGGTCCTACTGGGCATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
||
| CDS-3UTR CAA 90 bp | TCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCTCGAAAGACTTTCCTGTaGAGAAGGCTCCAGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHQLPDPLVLQLYQVFQPRKTFL*RRLQLL Trigger: GAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCG...AGGTTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS-3UTR CAA 90 bp | AATCTGTCCAAACTCGTCTGCGGCCCCAGCGTGCTCTGGCCTCCACACCTCACGTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLVCGPSVLWPPHLTFLQIP*ILKDLR Trigger: ACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAA...CGTGAGGTGTGGAGGCCAGAGCACGCTGGGGCCGCAGACGAGTTTGGACAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCCTCCTCCAGCTCTGATGCTCCTCGGGTCCAGTTCTCATCAGCTCCCAGATTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GASSSSDAPRVQFSSAPRFLQIP*ILKDLR Trigger: ACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAA...TCTGGGAGCTGATGAGAACTGGACCCGAGGAGCATCAGAGCTGGAGGAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCTCATCAGCTCCCAGATCCGCTGGTCCTTCAGCTGTACCAGGTGTTCCAACCCAGAGCCCTTCAATaGAGTCCCTGCCTTCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSHQLPDPLVLQLYQVFQPRALQ*SPCLLL Trigger: CAAAAGAAGGCAGGGACTCAATTGAAGGGCTCTGGG...TTGGAACACCTGGTACAGCTGAAGGACCAGCGGATCTGGGAGCTGATGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCTCTGCATCCTTGCAGCTCAGAATCTCCGGGAAGCAAGGGATGCCCAGTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GSLCILAAQNLREARDAQFLQIP*ILKDLR Trigger: ACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAA...CTGGGCATCCCTTGCTTCCCGGAGATTCTGAGCTGCAAGGATGCAGAGGGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
||
| CDS TCA 90 bp | TCCACAGCAGAGTGTCTTGGATCAGCTGTACCAGCTGAGCCTACATaGACAGTCCTGGCCTCCATCTTCTCCCTCAGTGCACATAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: STAECLGSAVPAEPT*TVLASIFSLSAHRI Trigger: TATTCTATGTGCACTGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGATCCAAGACACTCTGCTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
||
| CDS TCA 90 bp | GCTGTACCAGGTGTTCCAACCTCATCACCTTCAACTGCAAAATCTTaGCCGTCTCCTGCAGAATGGCTAGTGCTTGCTCCTTATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: AVPGVPTSSPSTAKS*PSPAEWLVLAPYPP Trigger: TGGAGGATAAGGAGCAAGCACTAGCCATTCTGCAGGAGACGGTCAAGATTTTGCAGTTGAAGGTGATGAGGTTGGAACACCTGGTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS GCA 90 bp | CTGTTGGATACCACCCTTTGGATATCATTATCTGAGATACACAAGTaGAGCTTGCGAAAGACTTTCCTGTTGAGAAGGCTCCAGTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLDTTLWISLSEIHK*SLRKTFLLRRLQLL Trigger: GAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAGGGTGGTATCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS TCA 90 bp | GATAACTCCAGGCCTGTTGGATACCACCCTTTGGATATCATTATCTaGGATACACAAGTGCAGCTTGCGAAAGACTTTCCTGTTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DNSRPVGYHPLDIII*DTQVQLAKDFPVEK Trigger: CTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAGGGTGGTATCCAACAGGCCTGGAGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CCA 72 bp | GCCACCAGCACACCATCACTGAAGTCCCGAGCCAAGTaGCGCTTGGGGCGGCTGAGTGGGAGCCGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATSTPSLKSRAK*RLGRLSGSRSS Trigger: GCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCGGGACTTCAGTGATGGTGTGCTGGTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CCA 72 bp | GAAGTCCCGAGCCAAGTGGCGCTTGGGGCGGCTGAGTaGGAGCCGGTCCAGCCAGGCGCAGAGGTTATGAAT | + |
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Preference number: 6 (lower is better) Translates to: EVPSQVALGAAE*EPVQPGAEVMN Trigger: ATTCATAACCTCTGCGCCTGGCTGGACCGGCTCCCACTCAGCCGCCCCAAGCGCCACTTGGCTCGGGACTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS TCA 72 bp | CTGAGTGGGAGCCGGTCCAGCCAGGCGCAGAGGTTATaGATATCCCCAGGCGTTGGCAGGAACGAAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LSGSRSSQAQRL*ISPGVGRNEAE Trigger: CTCAGCTTCGTTCCTGCCAACGCCTGGGGATATTCATAACCTCTGCGCCTGGCTGGACCGGCTCCCACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 72 bp | CCAGCCAGGCGCAGAGGTTATGAATATCCCCAGGCGTaGGCAGGAACGAAGCTGAGCTCGGCTTGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PARRRGYEYPQA*AGTKLSSAWKH Trigger: GTGCTTCCAAGCCGAGCTCAGCTTCGTTCCTGCCAACGCCTGGGGATATTCATAACCTCTGCGCCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 90 bp | GGTCCACCCTCTGCAAGCACAGCAGCCCATTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGTGCTGGAGGGGGCTGGAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPPSASTAAHFLQIP*ILKDLRAGGGWRAL Trigger: CAGAGCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAAATGGGCTGCTGTGCTTGCAGAGGGTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS TCA 72 bp | GTGCTTGCTCCTTATCCTCCAGCTGCTGCTGGATGCTaGCCAGGTGATCCCAGAGCCCTTCAATTGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VLAPYPPAAAGC*PGDPRALQLSP Trigger: GGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGAGCAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097970.9 ENSMUST00000209335.2 |
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| CDS TCA 72 bp | TCCTTATCCTCCAGCTGCTGCTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATTGAGTCCAGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLSSSCCWMLTR*SQSPSIESSSP Trigger: TGGGCTGCTGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS TCA 72 bp | AGGCTAGGGAGCAGAAGGAGGTGGGCGGGGAGAATTTaGGAGATAAAGGTCCACCCTCTGCAAGCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RLGSRRRWAGRI*EIKVHPLQAQQ Trigger: CTGCTGTGCTTGCAGAGGGTGGACCTTTATCTCTCAAATTCTCCCCGCCCACCTCCTTCTGCTCCCTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS CAA 72 bp | CAGGCTAGGGAGCAGAAGGAGGTGGGCGGGGAGAATTaGAGAGATAAAGGTCCACCCTCTGCAAGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QAREQKEVGGEN*RDKGPPSASTA Trigger: TGCTGTGCTTGCAGAGGGTGGACCTTTATCTCTCAAATTCTCCCCGCCCACCTCCTTCTGCTCCCTAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210254.2 |
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| CDS TCA 72 bp | TCCTTATCCTCCAGCTGCTGCTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATTGAGTCCCCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLSSSCCWMLTR*SQSPSIESPLQ Trigger: TTGCAGAGGGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS TCA 72 bp | TCCTTATCCTCCAGCTGCTGCTGGATGCTGACCAGGTaGTCCCAGAGCCCTTCAATTGAGTCCCTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSSSCCWMLTR*SQSPSIESLPS Trigger: AGAAGGCAGGGACTCAATTGAAGGGCTCTGGGATCACCTGGTCAGCATCCAGCAGCAGCTGGAGGATAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| CDS TCA 72 bp | GAGTGTCTTGGATCAGCTGTACCAGCTGAGCCTACATaGACAGTCCTGGCCTCCATCTTCTCCCTCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: ECLGSAVPAEPT*TVLASIFSLSA Trigger: TGCACTGAGGGAGAAGATGGAGGCCAGGACTGTTCATGTAGGCTCAGCTGGTACAGCTGATCCAAGACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS GCA 72 bp | TTTTCTCCAAATCCCTTTGATTCTGAAGGATCTTCGTaGTGGAGGGGGCTGGAGGGCTCTGTAGGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSPNPFDSEGSS*WRGLEGSVGLP Trigger: AGGCAGGCCTACAGAGCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000210254.2 |
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| CDS CCA 72 bp | GTTATCCACATCAGGATCTTGCATCTTAGAGGTATGTaGGTTGGGGGTAAGATCCCGCCAGGGTCGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: VIHIRILHLRGM*VGGKIPPGSDS Trigger: GCTGTCCGACCCTGGCGGGATCTTACCCCCAACCCACATACCTCTAAGATGCAAGATCCTGATGTGGATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 72 bp | AGCTTGCGAAAGACTTTCCTGTTGAGAAGGCTCCAGTaGCTCAGCTTCTGGTCTGTACTGCAGGCTGGGACG | + |
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Preference number: 6 (lower is better) Translates to: SLRKTFLLRRLQ*LSFWSVLQAGT Trigger: CGTCCCAGCCTGCAGTACAGACCAGAAGCTGAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 90 bp | AGAGCCCTTCAATTGAGTCCAGCAGCCCATTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGTGCTGGAGGGGGCTGGAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RALQLSPAAHFLQIP*ILKDLRAGGGWRAL Trigger: CAGAGCCCTCCAGCCCCCTCCAGCACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAAATGGGCTGCTGGACTCAATTGAAGGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS GCA 72 bp | AAAATCTTGACCGTCTCCTGCAGAATGGCTAGTGCTTaGTCCTTATCCTCCAGCTGCTGCTGGATGCTGACC | + |
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Preference number: 6 (lower is better) Translates to: KILTVSCRMASA*SLSSSCCWMLT Trigger: GGTCAGCATCCAGCAGCAGCTGGAGGATAAGGAGCAAGCACTAGCCATTCTGCAGGAGACGGTCAAGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS CAA 72 bp | CTGGAGGGCTCTGTAGGCCTGCCTTCTTTTGAAGGTTaGGGAGTTCAACATCATGGACCCAGCTTTCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LEGSVGLPSFEG*GVQHHGPSFRE Trigger: TTCCCGAAAGCTGGGTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGCCTACAGAGCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000210254.2 |
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| CDS CAA 72 bp | TCTGCAAGCACAGCAGCCCATTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGTGCTGGAGGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SASTAAHFLQIP*ILKDLRAGGGW Trigger: CCAGCCCCCTCCAGCACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAAATGGGCTGCTGTGCTTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097970.9 ENSMUST00000210254.2 |
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| CDS CAA 72 bp | CAATTGAGTCCAGCAGCCCATTTTCTCCAAATCCCTTaGATTCTGAAGGATCTTCGTGCTGGAGGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLSPAAHFLQIP*ILKDLRAGGGW Trigger: CCAGCCCCCTCCAGCACGAAGATCCTTCAGAATCAAAGGGATTTGGAGAAAATGGGCTGCTGGACTCAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121412.2 |
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| CDS CAA 90 bp | AGCTGTACCAGGTGTTCCAACCTCATCACCTTCAACTGCAAAATCTaGACCGTCTCCTGCAGAATGGCTAGTGCTTGCTCCTTATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCTRCSNLITFNCKI*TVSCRMASACSLSS Trigger: GGAGGATAAGGAGCAAGCACTAGCCATTCTGCAGGAGACGGTCAAGATTTTGCAGTTGAAGGTGATGAGGTTGGAACACCTGGTACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS CAA 72 bp | AGGTGTTCCAACCTCATCACCTTCAACTGCAAAATCTaGACCGTCTCCTGCAGAATGGCTAGTGCTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCSNLITFNCKI*TVSCRMASACS Trigger: GGAGCAAGCACTAGCCATTCTGCAGGAGACGGTCAAGATTTTGCAGTTGAAGGTGATGAGGTTGGAACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097970.9 |
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| CDS CAA 72 bp | GATCCCAGAGCCCTTCAATTGAGTCCCTGCCTTCTTTaGAAGGTTTGGGAGTTCAACATCATGGACCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: DPRALQLSPCLL*KVWEFNIMDPA Trigger: AGCTGGGTCCATGATGTTGAACTCCCAAACCTTCAAAAGAAGGCAGGGACTCAATTGAAGGGCTCTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209335.2 |
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| CDS CAA 90 bp | TCATTATCTGAGATACACAAGTGCAGCTTGCGAAAGACTTTCCTGTaGAGAAGGCTCCAGTTGCTCAGCTTCTGGTCTGTACTGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLSEIHKCSLRKTFL*RRLQLLSFWSVLQA Trigger: AGCCTGCAGTACAGACCAGAAGCTGAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 90 bp | GATACCACCCTTTGGATATCATTATCTGAGATACACAAGTGCAGCTaGCGAAAGACTTTCCTGTTGAGAAGGCTCCAGTTGCTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DTTLWISLSEIHKCS*RKTFLLRRLQLLSF Trigger: GAAGCTGAGCAACTGGAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAGGGTGGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS TCA 72 bp | AGGCCTGTTGGATACCACCCTTTGGATATCATTATCTaGGATACACAAGTGCAGCTTGCGAAAGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPVGYHPLDIII*DTQVQLAKDFP Trigger: AGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAGGGTGGTATCCAACAGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS GCA 72 bp | ACCACCCTTTGGATATCATTATCTGAGATACACAAGTaGAGCTTGCGAAAGACTTTCCTGTTGAGAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TTLWISLSEIHK*SLRKTFLLRRL Trigger: GAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAGGGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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| CDS CAA 72 bp | CTTTGGATATCATTATCTGAGATACACAAGTGCAGCTaGCGAAAGACTTTCCTGTTGAGAAGGCTCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LWISLSEIHKCS*RKTFLLRRLQL Trigger: CAACTGGAGCCTTCTCAACAGGAAAGTCTTTCGCAAGCTGCACTTGTGTATCTCAGATAATGATATCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097970.9 ENSMUST00000121412.2 ENSMUST00000209335.2 ENSMUST00000210254.2 |
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