Pregenerated sensors for SPEER4F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091827Ensembl transcript IDs: ENSMUST00000166086.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTaGCAAGAGGCGTTGTCTGAAGAGAAAAGGGAACAACACCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: CSSWTLDSSAASSVL*QEALSEEKREQHPE Trigger: TTCAGGGTGTTGTTCCCTTTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| 3UTR CAA 90 bp | ACTTTTAGCAGCACAGACCTACAGCCTGCTGCTCCTCTTGGACACTaGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TFSSTDLQPAAPLGH*IAVQPAQFFAKRRC Trigger: ACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGAGCAGCAGGCTGTAGGTCTGTGCTGCTAAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| 3UTR CAA 90 bp | ACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTaGTCTGAAGAGAAAAGGGAACAACACCCTGAATCAGCCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: TLDSSAASSVLCQEA*SEEKREQHPESAMA Trigger: AGCCATGGCTGATTCAGGGTGTTGTTCCCTTTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | GATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGAAGAGAAAAGGGGACTCCTGGGGTaGCAACTCCTCAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DSSAASSVLCQEALSEEKRGLLG*QLLSRA Trigger: GGCCCTGCTGAGGAGTTGCCACCCCAGGAGTCCCCT...TTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTGTGGGTGCTGGAGATaGTGCTCAGCAGGGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SSWTLDSSAASSVLCQEACGCWR*CSAGDS Trigger: GGAGTCCCCTGCTGAGCACCATCTCCAGCACCCACA...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTAGGGGCCTCCTGGGGTaGCAACTCATCCTGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: WTLDSSAASSVLCQEALSRGLLG*QLILQD Trigger: ATCCTGCAGGATGAGTTGCCACCCCAGGAGGCCCCT...AGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGAAGAGAAAAGGGAACAATCAGCAGGGGCCTCCTaGGGTGGCAACTCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AASSVLCQEALSEEKREQSAGAS*GGNSSC Trigger: GCAGGATGAGTTGCCACCCCAGGAGGCCCCTGCTGA...TTGTTCCCTTTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGAAGAGAAAAGGGAACAATCAGCAGGGGCCTCCTaGGGTGACAACTCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AASSVLCQEALSEEKREQSAGAS*GDNSSA Trigger: TGCTGAGGAGTTGTCACCCCAGGAGGCCCCTGCTGA...TTGTTCCCTTTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | GCTTTCTCTTTCTGTACTTTTAGCAGCACAGACCTACAGCCTGCTGCTCCTCTTTCAGCAGGGGACTCCTaGGGTGGCAACTCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AFSFCTFSSTDLQPAAPLSAGDS*GGNSSA Trigger: TGCTGAGGAGTTGCCACCCCAGGAGTCCCCTGCTGA...AAGAGGAGCAGCAGGCTGTAGGTCTGTGCTGCTAAAAGTACAGAAAGAGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGAAAGATTGTGGGTGCTaGAGATGGTGCTCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SSWTLDSSAASSVLCQEAKDCGC*RWCSAG Trigger: CCCTGCTGAGCACCATCTCCAGCACCCACAATCTTT...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGCTCTCCCATCCACATTaGCTCTCTGAAAAAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSWTLDSSAASSVLCQEALSHPH*LSEKVS Trigger: GGAGACTTTTTCAGAGAGCCAATGTGGATGGGAGAG...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTCATTCCTCTCACATaGAAGGCCAGCATCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: SSWTLDSSAASSVLCQEAFIPLT*KASIHA Trigger: AGCATGGATGCTGGCCTTCCATGTGAGAGGAATGAA...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR TCA 90 bp | TCTTTCTGTACTTTTAGCAGCACAGACCTACAGCCTGCTGCTCCTCTTGGACACTCCACATTGGCTCTCTaGAAAAGTCTCCTGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SFCTFSSTDLQPAAPLGHSTLAL*KSLLSR Trigger: CCGACTCAGGAGACTTTTTCAGAGAGCCAATGTGGA...GTGTCCAAGAGGAGCAGCAGGCTGTAGGTCTGTGCTGCTAAAAGTACAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR GCA 90 bp | CTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTACTCATCCTGCAGGATaGTGTCTTCTTGATCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LGHLIAVQPAQFFAKRRCTHPAG*CLLDLW Trigger: CCACAGATCAAGAAGACAGCATCCTGCAGGATGAGT...ACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR TCA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGATAAGAAGATTCATCTaGGAAAGATTGTGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSWTLDSSAASSVLCQEAIRRFI*ERLWVL Trigger: CAGCACCCACAATCTTTCTCAGATGAATCTTCTTAT...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CCA 90 bp | TGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTAGCCCATTTTTCTCTTaGCTAATGAGCTGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: WTLDSSAASSVLCQEALSSPFFS*LMSWIS Trigger: AGAGATCCAGCTCATTAGCCAAGAGAAAAATGGGCT...AGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 90 bp | GAGAAAGATTGTGGGTGCTGGAGATGGTGCTCAGCAGGGGACTCCTaGGGTGGCAACTCCTCAGCAGGGCCCTCCTGGGGTGGCAACTGC | + |
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Preference number: 5 (lower is better) Translates to: EKDCGCWRWCSAGDS*GGNSSAGPSWGGNC Trigger: GCAGTTGCCACCCCAGGAGGGCCCTGCTGAGGAGTTGCCACCCCAGGAGTCCCCTGCTGAGCACCATCTCCAGCACCCACAATCTTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 90 bp | ACTCCTCAGCAGGGGCCTCCTGGGGTGGCAACTCATCCTGCAGGATaGTGTCTTCTTGATCTGTGGCCAATCCCAGTTCTCTTGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: TPQQGPPGVATHPAG*CLLDLWPIPVLLQF Trigger: AAACTGCAAGAGAACTGGGATTGGCCACAGATCAAGAAGACAGCATCCTGCAGGATGAGTTGCCACCCCAGGAGGCCCCTGCTGAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 90 bp | CCACATTCGCCAAGTCCACCTCCTTCGTCCTTCATTCCTCTCACATaGAAGGCCAGCATCCATGCTCCCCTCTCTTGTCTCTCTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: PHSPSPPPSSFIPLT*KASIHAPLSCLSPI Trigger: GATGGGAGAGAGACAAGAGAGGGGAGCATGGATGCTGGCCTTCCATGTGAGAGGAATGAAGGACGAAGGAGGTGGACTTGGCGAATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 90 bp | ACCTCCTTCGTCCTTCATTCCTCTCACATGGAAGGCCAGCATCCATaGTCCCCTCTCTTGTCTCTCTCCCATCCACATTGGCTCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: TSFVLHSSHMEGQHP*SPLLSLSHPHWLSE Trigger: TTCAGAGAGCCAATGTGGATGGGAGAGAGACAAGAGAGGGGAGCATGGATGCTGGCCTTCCATGTGAGAGGAATGAAGGACGAAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | CTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTCGGGCCTCCATGGTaGCCATCTCTAAGTCGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LGHLIAVQPAQFFAKRRCLGPPW*PSLSRV Trigger: AACACGACTTAGAGATGGCAACCATGGAGGCCCGAG...ACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTTGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGCAGCCCATTTTTCTCTaGGCTAATGAGCTGGATCTC | + |
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Preference number: 5 (lower is better) Translates to: SSWTLDSSAASSVLCQEAQPIFL*ANELDL Trigger: GAGATCCAGCTCATTAGCCAAGAGAAAAATGGGCTG...CGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCAAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | GATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGAAGAGAAACAGGATGCTGTCTTCTaGATCTGTGGCCAATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DSSAASSVLCQEALSEEKQDAVF*ICGQSQ Trigger: CTGGGATTGGCCACAGATCAAGAAGACAGCATCCTG...TTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 90 bp | GTTCGTCTTTACCACTCAGGTTCACGTCCAAATGCTGTTGAATGCTaGCCCATTCAGCCTGTACTTCCTTGCTCTCCTGCTGCAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: VRLYHSGSRPNAVEC*PIQPVLPCSPAAMS Trigger: TGACATTGCAGCAGGAGAGCAAGGAAGTACAGGCTGAATGGGCCAGCATTCAACAGCATTTGGACGTGAACCTGAGTGGTAAAGACGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | TCTTTCTGTACTTTTAGCAGCACAGACCTACAGCCTGCTGCTCCTCTTGGACACTTTAGCCTCGTGATCTaGGATCCCAAGGTCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SFCTFSSTDLQPAAPLGHFSLVI*DPKVKF Trigger: GAACTTGACCTTGGGATCCAAGATCACGAGGCTAAA...GTGTCCAAGAGGAGCAGCAGGCTGTAGGTCTGTGCTGCTAAAAGTACAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | TGGACACTTGATAGCAGTGCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGTGTCAAGGATGCTGTaGTTCTCCTGTTCGTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: WTLDSSAASSVLCQEALSVSRML*FSCSSL Trigger: TAAAGACGAACAGGAGAACAACAGCATCCTTGACAC...AGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS-3UTR CAA 90 bp | GCAGCCAGCTCAGTTCTTTGCCAAGAGGCGTTGTCTGAAGAGAAAAGGGAACAACCAATCCCAGTTCTCTaGCAGTTTCTGAGACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: AASSVLCQEALSEEKREQPIPVL*QFLRPD Trigger: ATCAGGTCTCAGAAACTGCAAGAGAACTGGGATTGG...TTGTTCCCTTTTCTCTTCAGACAACGCCTCTTGGCAAAGAACTGAGCTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | CAGGGGCCTCCTGGGGTGGCAACTCATCCTGCAGGATaGTGTCTTCTTGATCTGTGGCCAATCCCAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QGPPGVATHPAG*CLLDLWPIPVL Trigger: GAGAACTGGGATTGGCCACAGATCAAGAAGACAGCATCCTGCAGGATGAGTTGCCACCCCAGGAGGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | GATTCATCTGAGAAAGATTGTGGGTGCTGGAGATGGTaGTCAGCAGGGGACTCCTGGGGTGGCAACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: DSSEKDCGCWRW*SAGDSWGGNSS Trigger: TGAGGAGTTGCCACCCCAGGAGTCCCCTGCTGAGCACCATCTCCAGCACCCACAATCTTTCTCAGATGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 72 bp | CCAAGTCCACCTCCTTCGTCCTTCATTCCTCTCACATaGAAGGCCAGCATCCATGCTCCCCTCTCTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPPPSSFIPLT*KASIHAPLSCL Trigger: GAGACAAGAGAGGGGAGCATGGATGCTGGCCTTCCATGTGAGAGGAATGAAGGACGAAGGAGGTGGACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 72 bp | GAAGATTCATCTGAGAAAGATTGTGGGTGCTGGAGATaGTGCTCAGCAGGGGACTCCTGGGGTGGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: EDSSEKDCGCWR*CSAGDSWGGNS Trigger: GGAGTTGCCACCCCAGGAGTCCCCTGCTGAGCACCATCTCCAGCACCCACAATCTTTCTCAGATGAATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CAA 72 bp | CTGGGGTGGCAACTCATCCTGCAGGATGCTGTCTTCTaGATCTGTGGCCAATCCCAGTTCTCTTGCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGWQLILQDAVF*ICGQSQFSCSF Trigger: GAAACTGCAAGAGAACTGGGATTGGCCACAGATCAAGAAGACAGCATCCTGCAGGATGAGTTGCCACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CAA 90 bp | GTTCTCCTGTTCGTCTTTACCACTCAGGTTCACGTCCAAATGCTGTaGAATGCTGGCCCATTCAGCCTGTACTTCCTTGCTCTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLLFVFTTQVHVQML*NAGPFSLYFLALLL Trigger: CAGCAGGAGAGCAAGGAAGTACAGGCTGAATGGGCCAGCATTCAACAGCATTTGGACGTGAACCTGAGTGGTAAAGACGAACAGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS TCA 72 bp | TGGGGTGGCAACTCATCCTGCAGGATGCTGTCTTCTTaGTCTGTGGCCAATCCCAGTTCTCTTGCAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WGGNSSCRMLSS*SVANPSSLAVS Trigger: AGAAACTGCAAGAGAACTGGGATTGGCCACAGATCAAGAAGACAGCATCCTGCAGGATGAGTTGCCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 72 bp | TACCACTCAGGTTCACGTCCAAATGCTGTTGAATGCTaGCCCATTCAGCCTGTACTTCCTTGCTCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YHSGSRPNAVEC*PIQPVLPCSPA Trigger: AGCAGGAGAGCAAGGAAGTACAGGCTGAATGGGCCAGCATTCAACAGCATTTGGACGTGAACCTGAGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | CTTTACCACTCAGGTTCACGTCCAAATGCTGTTGAATaGTGGCCCATTCAGCCTGTACTTCCTTGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LYHSGSRPNAVE*WPIQPVLPCSP Trigger: AGGAGAGCAAGGAAGTACAGGCTGAATGGGCCAGCATTCAACAGCATTTGGACGTGAACCTGAGTGGTAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CCA 72 bp | GCAACTCATCCTGCAGGATGCTGTCTTCTTGATCTGTaGCCAATCCCAGTTCTCTTGCAGTTTCTGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: ATHPAGCCLLDL*PIPVLLQFLRP Trigger: AGGTCTCAGAAACTGCAAGAGAACTGGGATTGGCCACAGATCAAGAAGACAGCATCCTGCAGGATGAGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | TCTCGGGCCTCCATGGTTGCCATCTCTAAGTCGTGTTaGAATGTCATGAGCTCCTTCTGCTTTAACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SRASMVAISKSC*NVMSSFCFNFS Trigger: ACTGAAGTTAAAGCAGAAGGAGCTCATGACATTGCAACACGACTTAGAGATGGCAACCATGGAGGCCCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CAA 90 bp | GGATCCCAAGGTCAAGTTCAGGTAATCTCTCAGCCCATTTTTCTCTaGGCTAATGAGCTGGATCTCTTCCATCAGCTCCTCCTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GSQGQVQVISQPIFL*ANELDLFHQLLLFL Trigger: AAGGAAGAGGAGGAGCTGATGGAAGAGATCCAGCTCATTAGCCAAGAGAAAAATGGGCTGAGAGATTACCTGAACTTGACCTTGGGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS TCA 72 bp | TTGATCTGTGGCCAATCCCAGTTCTCTTGCAGTTTCTaGGACCTGATGTTCCTGAGTGTCAAGGATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LICGQSQFSCSF*DLMFLSVKDAV Trigger: AACAGCATCCTTGACACTCAGGAACATCAGGTCTCAGAAACTGCAAGAGAACTGGGATTGGCCACAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | GCTGTTGAATGCTGGCCCATTCAGCCTGTACTTCCTTaGTCTCCTGCTGCAATGTCATCAACTTCTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: AVECWPIQPVLP*SPAAMSSTSSL Trigger: TAAAGAAGAAGTTGATGACATTGCAGCAGGAGAGCAAGGAAGTACAGGCTGAATGGGCCAGCATTCAACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS GCA 72 bp | CAGTTTCTGAGACCTGATGTTCCTGAGTGTCAAGGATaGTGTTGTTCTCCTGTTCGTCTTTACCACTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QFLRPDVPECQG*CCSPVRLYHSG Trigger: ACCTGAGTGGTAAAGACGAACAGGAGAACAACAGCATCCTTGACACTCAGGAACATCAGGTCTCAGAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CAA 72 bp | GGTCAAGTTCAGGTAATCTCTCAGCCCATTTTTCTCTaGGCTAATGAGCTGGATCTCTTCCATCAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GQVQVISQPIFL*ANELDLFHQLL Trigger: GAGGAGCTGATGGAAGAGATCCAGCTCATTAGCCAAGAGAAAAATGGGCTGAGAGATTACCTGAACTTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS CAA 72 bp | TGCTGTCTTCTTGATCTGTGGCCAATCCCAGTTCTCTaGCAGTTTCTGAGACCTGATGTTCCTGAGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CCLLDLWPIPVL*QFLRPDVPECQ Trigger: TTGACACTCAGGAACATCAGGTCTCAGAAACTGCAAGAGAACTGGGATTGGCCACAGATCAAGAAGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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| CDS TCA 72 bp | TTCCCACTCAGGATAAGTGATATAAGAAGATTCATCTaGGAAAGATTGTGGGTGCTGGAGATGGTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FPLRISDIRRFI*ERLWVLEMVLS Trigger: GCTGAGCACCATCTCCAGCACCCACAATCTTTCTCAGATGAATCTTCTTATATCACTTATCCTGAGTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166086.3 |
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