Pregenerated sensors for SPEER4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048703Ensembl transcript IDs: ENSMUST00000053257.10, ENSMUST00000155721.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTTGGTAGCAGGGCAGCCGCCTCAGTTCTCTACCAAGAGTCGTTaGCTGAAGAGAAAAGGGAACAATGCCCTGAATCAGCCATGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HLVAGQPPQFSTKSR*LKRKGNNALNQPWL Trigger: AAGCCATGGCTGATTCAGGGCATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTGGTAGAGAACTGAGGCGGCTGCCCTGCTACCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR TCA 90 bp | GTTAGCAGTAAGAGAATTCATGACACCATGGATGCAGTATGGCAGTaGTTACATCATCAAGTGTGTGTCCATGGGGTAAGTAAAATTATC | + |
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Preference number: 1 (lower is better) Translates to: VSSKRIHDTMDAVWQ*LHHQVCVHGVSKII Trigger: GATAATTTTACTTACCCCATGGACACACACTTGATGATGTAATCACTGCCATACTGCATCCATGGTGTCATGAATTCTCTTACTGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR CCA 90 bp | TATTCCTTTCTGAGTGTTTTTATATCCGCAGCAGCTCTAGAACAATaGCTGTATATTACTCAGTATCTGGTTCACGGGATCATGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: YSFLSVFISAAALEQ*LYITQYLVHGIMNE Trigger: TTCATTCATGATCCCGTGAACCAGATACTGAGTAATATACAGCCATTGTTCTAGAGCTGCTGCGGATATAAAAACACTCAGAAAGGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR CAA 90 bp | ACTTTTAGCAGCACAGCCCTCCAGCCTGCTGCTCCTCTTGGACACTaGGTAGCAGGGCAGCCGCCTCAGTTCTCTACCAAGAGTCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: TFSSTALQPAAPLGH*VAGQPPQFSTKSRC Trigger: GCAACGACTCTTGGTAGAGAACTGAGGCGGCTGCCCTGCTACCAAGTGTCCAAGAGGAGCAGCAGGCTGGAGGGCTGTGCTGCTAAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR GCA 90 bp | TTTAGCAGCACAGCCCTCCAGCCTGCTGCTCCTCTTGGACACTTGGTAGCAGGGTCTACCAAGAGTCGTTaGCTGAAGAGAAAAGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FSSTALQPAAPLGHLVAGSTKSR*LKRKGN Trigger: GTTCCCTTTTCTCTTCAGGCAACGACTCTTGGTAGA...CCCTGCTACCAAGTGTCCAAGAGGAGCAGCAGGCTGGAGGGCTGTGCTGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR TCA 90 bp | TCATGTTTAGACATCCCTCCCTTTCAGGAGGAAAGACCCCTGAACTTTCTCCCACCAAGAGTCGTTGCCTaGAGAGAAAAGGGAACAATG | + |
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Preference number: 2 (lower is better) Translates to: SCLDIPPFQEERPLNFLPPRVVA*REKGTM Trigger: CATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTGG...TGGGAGAAAGTTCAGGGGTCTTTCCTCCTGAAAGGGAGGGATGTCTAAACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR TCA 90 bp | TCATGTTTAGACATCCCTCCCTTTCAGGAGGAAAGACCCCTGAACTTTCTCCCAATCCATCTCTGGATGTaGGTTCTAGGTCTACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SCLDIPPFQEERPLNFLPIHLWM*VLGLQQ Trigger: CTGCTGTAGACCTAGAACTCACATCCAGAGATGGAT...TGGGAGAAAGTTCAGGGGTCTTTCCTCCTGAAAGGGAGGGATGTCTAAACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR CCA 90 bp | AACCCCCTTAAAGAAACAGACGGACTACCGCTCTGGTGGCAAGTAGCAAAGCTTATAGCCCTGACTGCCTaGAACTTACAAAGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: NPLKETDGLPLWWQVAKLIALTA*NLQRSI Trigger: GATGGATCTTTGTAAGTTCCAGGCAGTCAGGGCTAT...AAGCTTTGCTACTTGCCACCAGAGCGGTAGTCCGTCTGTTTCTTTAAGGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGTTAACGGCTCTGACCCTTTCAGGCCAGAACCAAAGGGAAGCCATTGCTTGGCTCTGGCCTTCCTaGTTTATTTTATATTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SQLTALTLSGQNQREAIAWLWPS*FILYSF Trigger: AAAGGAATATAAAATAAATCAGGAAGGCCAGAGCCA...AGCAATGGCTTCCCTTTGGTTCTGGCCTGAAAGGGTCAGAGCCGTTAACTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR CAA 90 bp | TGTTGTTCACCTGTCACCCTGAGTGGACTGCAGACTAAAGCAGAGTaGAAAGTACACTTACCAGTGGTAACAGTGTCTCAAAAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: CCSPVTLSGLQTKAE*KVHLPVVTVSQKRL Trigger: TAGCCTCTTTTGAGACACTGTTACCACTGGTAAGTGTACTTTCAACTCTGCTTTAGTCTGCAGTCCACTCAGGGTGACAGGTGAACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTATGGTCAAGGACAACAGCATCTATCAAAAGCTATTTCCCAGCAAGCCATAAGGGAACAATGCCCTaGATCAGCCATGGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SLWSRTTASIKSYFPASHKGTMP*ISHGFL Trigger: GAGGAAGCCATGGCTGATTCAGGGCATTGTTCCCTT...ATGGCTTGCTGGGAAATAGCTTTTGATAGATGCTGTTGTCCTTGACCATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGTCATTATATCTGCTATGTGGTTATCACTTGATGAAGACCAGCTTCTCGAGGAGGAAAGACCCCTaGACTTTCTCCCAGTTAACG | + |
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Preference number: 2 (lower is better) Translates to: GRSLYLLCGYHLMKTSFSRRKDP*TFSQLT Trigger: CGTTAACTGGGAGAAAGTTCAGGGGTCTTTCCTCCT...CGAGAAGCTGGTCTTCATCAAGTGATAACCACATAGCAGATATAATGACCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAGAGTTGAAAGTACACTTACCAGTGGTAACAGTGTCTCAAAAGAGGCTATGTCTCACAAGAGGCTaGCTTCCCAGAATACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: KAELKVHLPVVTVSQKRLCLTRG*LPRILV Trigger: CACAAGTATTCTGGGAAGTCAGCCTCTTGTGAGACA...TAGCCTCTTTTGAGACACTGTTACCACTGGTAAGTGTACTTTCAACTCTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTCATTATATCTGCTATGTGGTTATCACTTGATGAAGACCAGCTTCTCGGCAGCTCTAGAACAATaGCTGTATATTACTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: GRSLYLLCGYHLMKTSFSAALEQ*LYITQY Trigger: ATACTGAGTAATATACAGCCATTGTTCTAGAGCTGC...CGAGAAGCTGGTCTTCATCAAGTGATAACCACATAGCAGATATAATGACCTTCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR GCA 72 bp | GCAGGGCAGCCGCCTCAGTTCTCTACCAAGAGTCGTTaGCTGAAGAGAAAAGGGAACAATGCCCTGAATCAG | + |
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Preference number: 3 (lower is better) Translates to: AGQPPQFSTKSR*LKRKGNNALNQ Trigger: CTGATTCAGGGCATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTGGTAGAGAACTGAGGCGGCTGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR CAA 90 bp | CATGCATGCAAGAATGTGACATGTTGTTCACCTGTCACCCTGAGTGGACTGCAGGACTTCCCAGAATACTaGTGTGAAGACAGAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: HACKNVTCCSPVTLSGLQDFPEY*CEDRAK Trigger: CTTTGCTCTGTCTTCACACAAGTATTCTGGGAAGTC...CTGCAGTCCACTCAGGGTGACAGGTGAACAACATGTCACATTCTTGCATGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR-3UTR CAA 90 bp | TCACTCAAACCTCCACATAGCATTCCACCTATCATGAAGACATGCATGCAAGAAGAGGAGGGTGGCTGCTaGGAAGTATGGACTAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: SLKPPHSIPPIMKTCMQEEEGGC*EVWTRK Trigger: CTTTCTAGTCCATACTTCCAAGCAGCCACCCTCCTC...TTCTTGCATGCATGTCTTCATGATAGGTGGAATGCTATGTGGAGGTTTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR TCA 72 bp | CAGAACCAAAGGGAAGCCATTGCTCTCCTCAATCACTaGTGGTCTATTGCAAGTAAACTGAGGCACATGGCT | + |
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Preference number: 3 (lower is better) Translates to: QNQREAIALLNH*WSIASKLRHMA Trigger: AGCCATGTGCCTCAGTTTACTTGCAATAGACCATCAGTGATTGAGGAGAGCAATGGCTTCCCTTTGGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR CCA 72 bp | CCCAGCAAGCCATGGAAGGTCATTATATCTGCTATGTaGTTATCACTTGATGAAGACCAGCTTCTCGAACCC | + |
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Preference number: 3 (lower is better) Translates to: PSKPWKVIISAM*LSLDEDQLLEP Trigger: GGGTTCGAGAAGCTGGTCTTCATCAAGTGATAACCACATAGCAGATATAATGACCTTCCATGGCTTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR CCA 72 bp | CTGAGTGTTTTTATATCCGCAGCAGCTCTAGAACAATaGCTGTATATTACTCAGTATCTGGTTCACGGGATC | + |
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Preference number: 3 (lower is better) Translates to: LSVFISAAALEQ*LYITQYLVHGI Trigger: GATCCCGTGAACCAGATACTGAGTAATATACAGCCATTGTTCTAGAGCTGCTGCGGATATAAAAACACTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| 3UTR-3UTR CAA 90 bp | AAACCTCCACATAGCATTCCACCTATCATGAAGACATGCATGCAAGAATGTGACCAGACTAAAGCAGAGTaGAAAGTACACTTACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KPPHSIPPIMKTCMQECDQTKAE*KVHLPV Trigger: CACTGGTAAGTGTACTTTCAACTCTGCTTTAGTCTG...GTCACATTCTTGCATGCATGTCTTCATGATAGGTGGAATGCTATGTGGAGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR TCA 72 bp | GTATATTACTCAGTATCTGGTTCACGGGATCATGAATaGATGTGTGTTATAGAGTGCTATATGTTAGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: VYYSVSGSRDHE*MCVIECYMLAV Trigger: TACTGCTAACATATAGCACTCTATAACACACATTCATTCATGATCCCGTGAACCAGATACTGAGTAATATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CCA 90 bp | GACATCCCTCCCTTTCAGGAGGAAAGACCCCTGAACTTTCTCCCAGTTAACGGCGGTGGGTGCTGGGGATaGTGCTCAGCAGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DIPPFQEERPLNFLPVNGGGCWG*CSAGAS Trigger: GGAGGCCCCTGCTGAGCACCATCCCCAGCACCCACC...GCCGTTAACTGGGAGAAAGTTCAGGGGTCTTTCCTCCTGAAAGGGAGGGATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTACCAAGAGTCGTTGCCTGAAGAGAAAAGGGAACAATGCCCTGAATCAGGGGTGCTGGGGATGGTaGTCAGCAGGGGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSTKSRCLKRKGNNALNQGCWGW*SAGASW Trigger: CCAGGAGGCCCCTGCTGAGCACCATCCCCAGCACCC...CTGATTCAGGGCATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTGGTAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CCA 90 bp | TCCCAGTTAACGGCTCTGACCCTTTCAGGCCAGAACCAAAGGGAAGCCATTGCTTGTCTTCTTCAGCTGTaGCCACTCCCAGCTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SQLTALTLSGQNQREAIACLLQL*PLPALL Trigger: CAAGAGAGCTGGGAGTGGCCACAGCTGAAGAAGACA...AGCAATGGCTTCCCTTTGGTTCTGGCCTGAAAGGGTCAGAGCCGTTAACTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | GCCAGAACCAAAGGGAAGCCATTGCTCTCCTCAATCACTGATGGTCTATTGCAAGAGGAAGATGGTGGGTaGTGGGGATGGTGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ARTKGKPLLSSITDGLLQEEDGG*WGWCSA Trigger: TGCTGAGCACCATCCCCAGCACCCACCATCTTCCTC...TTGCAATAGACCATCAGTGATTGAGGAGAGCAATGGCTTCCCTTTGGTTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CCA 90 bp | TCATGTTTAGACATCCCTCCCTTTCAGGAGGAAAGACCCCTGAACTTTCTCCCAATCCGAGGAAGATGGTaGGTGCTGGGGATGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SCLDIPPFQEERPLNFLPIRGRW*VLGMVL Trigger: GAGCACCATCCCCAGCACCCACCATCTTCCTCGGAT...TGGGAGAAAGTTCAGGGGTCTTTCCTCCTGAAAGGGAGGGATGTCTAAACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR TCA 90 bp | GACATCCCTCCCTTTCAGGAGGAAAGACCCCTGAACTTTCTCCCAGTTAACGGCAATTTATCTCCTTCTTaGGCTCCTGCTTGTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DIPPFQEERPLNFLPVNGNLSPS*APACSL Trigger: GAGAGAACAAGCAGGAGCTCAAGAAGGAGATAAATT...GCCGTTAACTGGGAGAAAGTTCAGGGGTCTTTCCTCCTGAAAGGGAGGGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | GCATGCAAGAATGTGACATGTTGTTCACCTGTCACCCTGAGTGGACTGCAGACTCTTGAGTCTTCAGGTTaGTGGTCTTCTCCTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ACKNVTCCSPVTLSGLQTLESSG*WSSPVC Trigger: ACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAG...AGTCTGCAGTCCACTCAGGGTGACAGGTGAACAACATGTCACATTCTTGCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR GCA 90 bp | AAAGATCCATCTCTGGATGTGAGTTCTAGGTCTACAGCAGGGGATAGAACACCTCTCTCTGAAAAAGTCTaGCAAGTCGGGCAAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: KDPSLDVSSRSTAGDRTPLSEKV*QVGQTR Trigger: CCTTGTTTGCCCGACTTGGCAGACTTTTTCAGAGAG...AGGTGTTCTATCCCCTGCTGTAGACCTAGAACTCACATCCAGAGATGGATCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | GCCAGAACCAAAGGGAAGCCATTGCTCTCCTCAATCACTGATGGTCTATTGCAACTTGAGTCTTCAGGTTaGTGGTCTTCTCCTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ARTKGKPLLSSITDGLLQLESSG*WSSPVC Trigger: ACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAG...TTGCAATAGACCATCAGTGATTGAGGAGAGCAATGGCTTCCCTTTGGTTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | GCCAGAACCAAAGGGAAGCCATTGCTCTCCTCAATCACTGATGGTCTATTGCAAACTCATTCTGCAAGATaGTGTCTTCTTCAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ARTKGKPLLSSITDGLLQTHSAR*CLLQLW Trigger: CCACAGCTGAAGAAGACAGCATCTTGCAGAATGAGT...TTGCAATAGACCATCAGTGATTGAGGAGAGCAATGGCTTCCCTTTGGTTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | CAAGAGTCGTTGCCTGAAGAGAAAAGGGAACAATGCCCTGAATCAGCCATGGCTCATGGCAACTCATTCTaGAAGATGCTGTCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QESLPEEKREQCPESAMAHGNSF*KMLSSS Trigger: TGAAGAAGACAGCATCTTGCAGAATGAGTTGCCATG...AGCCATGGCTGATTCAGGGCATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR GCA 90 bp | CCTGTCACCCTGAGTGGACTGCAGACTAAAGCAGAGTTGAAAGTACACTTACCACTCTCTGAAAAAGTCTaGCAAGTCGGGCAAACAAGN | + |
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Preference number: 4 (lower is better) Translates to: PVTLSGLQTKAELKVHLPLSEKV*QVGQTX Trigger: NCTTGTTTGCCCGACTTGGCAGACTTTTTCAGAGAG...TGGTAAGTGTACTTTCAACTCTGCTTTAGTCTGCAGTCCACTCAGGGTGACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR CAA 72 bp | CCTGTCACCCTGAGTGGACTGCAGACTAAAGCAGAGTaGAAAGTACACTTACCAGTGGTAACAGTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PVTLSGLQTKAE*KVHLPVVTVSQ Trigger: TTGAGACACTGTTACCACTGGTAAGTGTACTTTCAACTCTGCTTTAGTCTGCAGTCCACTCAGGGTGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR CCA 90 bp | TCACTCAAACCTCCACATAGCATTCCACCTATCATGAAGACATGCATGCAAGAACTCTCCCATCCACATTaGCTCTCTGAAAAAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLKPPHSIPPIMKTCMQELSHPH*LSEKVC Trigger: GCAGACTTTTTCAGAGAGCCAATGTGGATGGGAGAG...TTCTTGCATGCATGTCTTCATGATAGGTGGAATGCTATGTGGAGGTTTGAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| 3UTR CAA 72 bp | TTCAGTGTCTCACAAGAGGCTGACTTCCCAGAATACTaGTGTGAAGACAGAGCAAAGAACAGCTACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSVSQEADFPEY*CEDRAKNSYIP Trigger: TGGAATGTAGCTGTTCTTTGCTCTGTCTTCACACAAGTATTCTGGGAAGTCAGCCTCTTGTGAGACACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR TCA 90 bp | AAAGAACAGCTACATTCCATGAGGAGGGTGGCTGCTTGGAAGTATGGACTAGAACGTGTAGATATGTCATaGTCTCCTTCTCCTTTAATT | + |
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Preference number: 4 (lower is better) Translates to: KEQLHSMRRVAAWKYGLERVDMS*SPSPLI Trigger: AATTAAAGGAGAAGGAGATCATGACATATCTACACG...TTCTAGTCCATACTTCCAAGCAGCCACCCTCCTCATGGAATGTAGCTGTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR TCA 90 bp | ATCTATCAAAAGCTATTTCCCAGCAAGCCATGGAAGGTCATTATATCTGCTATGCTCTCTTGCAGCTTCTaGGACCTGATGTTCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IYQKLFPSKPWKVIISAMLSCSF*DLMFLS Trigger: ACTCAAGAACATCAGGTCTCAGAAGCTGCAAGAGAG...CATAGCAGATATAATGACCTTCCATGGCTTGCTGGGAAATAGCTTTTGATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CCA 90 bp | ATCTATCAAAAGCTATTTCCCAGCAAGCCATGGAAGGTCATTATATCTGCTATGCTCTCCCATCCACATTaGCTCTCTGAAAAAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IYQKLFPSKPWKVIISAMLSHPH*LSEKVC Trigger: GCAGACTTTTTCAGAGAGCCAATGTGGATGGGAGAG...CATAGCAGATATAATGACCTTCCATGGCTTGCTGGGAAATAGCTTTTGATAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR TCA 90 bp | GGAAGGTCATTATATCTGCTATGTGGTTATCACTTGATGAAGACCAGCTTCTCGCGTGTAGATATGTCATaGTCTCCTTCTCCTTTAATT | + |
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Preference number: 4 (lower is better) Translates to: GRSLYLLCGYHLMKTSFSRVDMS*SPSPLI Trigger: AATTAAAGGAGAAGGAGATCATGACATATCTACACG...CGAGAAGCTGGTCTTCATCAAGTGATAACCACATAGCAGATATAATGACCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR TCA 90 bp | TTGAAAGTACACTTACCAGTGGTAACAGTGTCTCAAAAGAGGCTAATTCAGTGTAATTTATCTCCTTCTTaGGCTCCTGCTTGTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKVHLPVVTVSQKRLIQCNLSPS*APACSL Trigger: GAGAGAACAAGCAGGAGCTCAAGAAGGAGATAAATT...ACACTGAATTAGCCTCTTTTGAGACACTGTTACCACTGGTAAGTGTACTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR GCA 90 bp | ATCTATCAAAAGCTATTTCCCAGCAAGCCATGGAAGGTCATTATATCTGCTATGCCCAGGAAGGACATGTaGTATAAGAAGATTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: IYQKLFPSKPWKVIISAMPRKDM*YKKIHL Trigger: CAGATGAATCTTCTTATAGCACATGTCCTTCCTGGG...CATAGCAGATATAATGACCTTCCATGGCTTGCTGGGAAATAGCTTTTGATAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 90 bp | AGATGGTGGGTGCTGGGGATGGTGCTCAGCAGGGGCCTCCTGGCATaGCAACTCATTCTGCAAGATGCTGTCTTCTTCAGCTGTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RWWVLGMVLSRGLLA*QLILQDAVFFSCGH Trigger: GTGGCCACAGCTGAAGAAGACAGCATCTTGCAGAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCACCATCCCCAGCACCCACCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS GCA 90 bp | TCTGAGGAAGATTCATCCGAGGAAGATGGTGGGTGCTGGGGATGGTaGTCAGCAGGGGCCTCCTGGCATGGCAACTCATTCTGCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: SEEDSSEEDGGCWGW*SAGASWHGNSFCKM Trigger: CATCTTGCAGAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCACCATCCCCAGCACCCACCATCTTCCTCGGATGAATCTTCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 90 bp | GAAGATTCATCTGAGGAAGATTCATCCGAGGAAGATGGTGGGTGCTaGGGATGGTGCTCAGCAGGGGCCTCCTGGCATGGCAACTCATTC | + |
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Preference number: 5 (lower is better) Translates to: EDSSEEDSSEEDGGC*GWCSAGASWHGNSF Trigger: GAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCACCATCCCCAGCACCCACCATCTTCCTCGGATGAATCTTCCTCAGATGAATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 90 bp | CCTGGCATGGCAACTCATTCTGCAAGATGCTGTCTTCTTCAGCTGTaGCCACTCCCAGCTCTCTTGCAGCTTCTGAGACCTGATGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PGMATHSARCCLLQL*PLPALLQLLRPDVL Trigger: AAGAACATCAGGTCTCAGAAGCTGCAAGAGAGCTGGGAGTGGCCACAGCTGAAGAAGACAGCATCTTGCAGAATGAGTTGCCATGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | TTTCAGGCCAGAACCAAAGGGAAGCCATTGCTCTCCTCAATCACTGATGGTCTATTCTTGAGCTCCTGCTaGTTCTCTCGGGCCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: FQARTKGKPLLSSITDGLFLSSC*FSRASM Trigger: CATGGAGGCCCGAGAGAACAAGCAGGAGCTCAAGAA...TAGACCATCAGTGATTGAGGAGAGCAATGGCTTCCCTTTGGTTCTGGCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | ACAGCTACATTCCATGAGGAGGGTGGCTGCTTGGAAGTATGGACTAGAAAGTTGCCCTACCTGATGTTCTaGAGTCTTCAGGTTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: TATFHEEGGCLEVWTRKLPYLMF*SLQVAG Trigger: ACCAGCAACCTGAAGACTCAAGAACATCAGGTAGGG...CAACTTTCTAGTCCATACTTCCAAGCAGCCACCCTCCTCATGGAATGTAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS GCA 90 bp | GCTCTCTTGCAGCTTCTGAGACCTGATGTTCTTGAGTCTTCAGGTTaGTGGTCTTCTCCTGTTTGTCTTTACCACTCAGGTTCAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: ALLQLLRPDVLESSG*WSSPVCLYHSGSTP Trigger: TGGAGTTGAACCTGAGTGGTAAAGACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAGAACATCAGGTCTCAGAAGCTGCAAGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 90 bp | CTCTTGCAGCTTCTGAGACCTGATGTTCTTGAGTCTTCAGGTTGCTaGTCTTCTCCTGTTTGTCTTTACCACTCAGGTTCAACTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LLQLLRPDVLESSGC*SSPVCLYHSGSTPP Trigger: TGGTGGAGTTGAACCTGAGTGGTAAAGACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAGAACATCAGGTCTCAGAAGCTGCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | ACTTGTGTGAAGACAGAGCAAAGAACAGCTACATTCCATGAGGAGGGTGGCTGCTTAGCTAGTACTTCCTaGCTCTCCTGCTGCAATATC | + |
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Preference number: 5 (lower is better) Translates to: TCVKTEQRTATFHEEGGCLASTS*LSCCNI Trigger: GATATTGCAGCAGGAGAGCAAGGAAGTACTAGCTAA...GCAGCCACCCTCCTCATGGAATGTAGCTGTTCTTTGCTCTGTCTTCACACAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS CCA 90 bp | CTGAATTGGTTGTCCCTACCTGATGTTCTTGAGTCTTCAGGTTGCTaGTCTTCTCCTGTTTGTCTTTACCACTCAGGTTCAACTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LNWLSLPDVLESSGC*SSPVCLYHSGSTPP Trigger: TGGTGGAGTTGAACCTGAGTGGTAAAGACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAGAACATCAGGTAGGGACAACCAATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGAATACTTGTGTGAAGACAGAGCAAAGAACAGCTACATTCCATGAGGAGGTGAGCTGGATCTTTTaGATCAGCTCCTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SQNTCVKTEQRTATFHEEVSWIF*ISSFSS Trigger: GGAAGAGAAGGAGCTGATCAAAAAGATCCAGCTCAC...CTCCTCATGGAATGTAGCTGTTCTTTGCTCTGTCTTCACACAAGTATTCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTACCAAGAGTCGTTGCCTGAAGAGAAAAGGGAACAATGCCCTGAATCAGTTAGCTAGTACTTCCTaGCTCTCCTGCTGCAATATC | + |
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Preference number: 5 (lower is better) Translates to: FSTKSRCLKRKGNNALNQLASTS*LSCCNI Trigger: GATATTGCAGCAGGAGAGCAAGGAAGTACTAGCTAA...CTGATTCAGGGCATTGTTCCCTTTTCTCTTCAGGCAACGACTCTTGGTAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | AAAGATCCATCTCTGGATGTGAGTTCTAGGTCTACAGCAGGGGATAGAACACCTTTTATAATGTCGATTTaGCCTGTGGTAGGGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: KDPSLDVSSRSTAGDRTPFIMSI*PVVGPL Trigger: AAGAGGCCCTACCACAGGCAAAATCGACATTATAAA...AGGTGTTCTATCCCCTGCTGTAGACCTAGAACTCACATCCAGAGATGGATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | GTCTCACAAGAGGCTGACTTCCCAGAATACTTGTGTGAAGACAGAGCAAAGAACTTTATAATGTCGATTTaGCCTGTGGTAGGGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VSQEADFPEYLCEDRAKNFIMSI*PVVGPL Trigger: AAGAGGCCCTACCACAGGCAAAATCGACATTATAAA...GTTCTTTGCTCTGTCTTCACACAAGTATTCTGGGAAGTCAGCCTCTTGTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCTCACAGAAAGTCATGTTTAGACATCCCTCCCTTTCAGGAGGAAAGACCAAATTTATCTCCTTCTaGAGCTCCTGCTTGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGSQKVMFRHPSLSGGKTKFISF*SSCLFS Trigger: AGAGAACAAGCAGGAGCTCAAGAAGGAGATAAATTT...GGTCTTTCCTCCTGAAAGGGAGGGATGTCTAAACATGACTTTCTGTGAGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCACCCTGAGTGGACTGCAGACTAAAGCAGAGTTGAAAGTACACTTACCAAAATTTATCTCCTTCTaGAGCTCCTGCTTGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVTLSGLQTKAELKVHLPKFISF*SSCLFS Trigger: AGAGAACAAGCAGGAGCTCAAGAAGGAGATAAATTT...TGGTAAGTGTACTTTCAACTCTGCTTTAGTCTGCAGTCCACTCAGGGTGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS-3UTR CAA 90 bp | TCTATTGCAAGTAAACTGAGGCACATGGCTCTGGCCTTCCTGATTTATTTTATAGTGAGCTGGATCTTTTaGATCAGCTCCTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SIASKLRHMALAFLIYFIVSWIF*ISSFSS Trigger: GGAAGAGAAGGAGCTGATCAAAAAGATCCAGCTCAC...TATAAAATAAATCAGGAAGGCCAGAGCCATGTGCCTCAGTTTACTTGCAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 72 bp | GGTGGGTGCTGGGGATGGTGCTCAGCAGGGGCCTCCTaGCATGGCAACTCATTCTGCAAGATGCTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGCWGWCSAGAS*HGNSFCKMLSS Trigger: AGAAGACAGCATCTTGCAGAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCACCATCCCCAGCACCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS GCA 72 bp | TGCTCAGCAGGGGCCTCCTGGCATGGCAACTCATTCTaGAAGATGCTGTCTTCTTCAGCTGTGGCCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSAGASWHGNSF*KMLSSSAVATP Trigger: GGGAGTGGCCACAGCTGAAGAAGACAGCATCTTGCAGAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 72 bp | GTGCTGGGGATGGTGCTCAGCAGGGGCCTCCTGGCATaGCAACTCATTCTGCAAGATGCTGTCTTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLGMVLSRGLLA*QLILQDAVFFS Trigger: GCTGAAGAAGACAGCATCTTGCAGAATGAGTTGCCATGCCAGGAGGCCCCTGCTGAGCACCATCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 72 bp | CCAATTCCACCTCCTTCGTCCTTCATTACTCTCAGGTaGAAGGCCAGCATCCTCCCTCCCCTCTCTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PIPPPSSFITLR*KASILPPLSGL Trigger: GAGACCAGAGAGGGGAGGGAGGATGCTGGCCTTCCACCTGAGAGTAATGAAGGACGAAGGAGGTGGAATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053257.10 ENSMUST00000155721.2 |
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| CDS TCA 72 bp | TTCAGCTGTGGCCACTCCCAGCTCTCTTGCAGCTTCTaGGACCTGATGTTCTTGAGTCTTCAGGTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FSCGHSQLSCSF*DLMFLSLQVAG Trigger: ACCAGCAACCTGAAGACTCAAGAACATCAGGTCTCAGAAGCTGCAAGAGAGCTGGGAGTGGCCACAGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 72 bp | GCAACTCATTCTGCAAGATGCTGTCTTCTTCAGCTGTaGCCACTCCCAGCTCTCTTGCAGCTTCTGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: ATHSARCCLLQL*PLPALLQLLRP Trigger: AGGTCTCAGAAGCTGCAAGAGAGCTGGGAGTGGCCACAGCTGAAGAAGACAGCATCTTGCAGAATGAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS TCA 72 bp | TTGCTTATGACAGGTACAGGGGATGATGTCAGTCTGTaGGCCATCCACATTCGCCAATTCCACCTCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: LLMTGTGDDVSL*AIHIRQFHLLR Trigger: ACGAAGGAGGTGGAATTGGCGAATGTGGATGGCTCACAGACTGACATCATCCCCTGTACCTGTCATAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053257.10 ENSMUST00000155721.2 |
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| CDS TCA 72 bp | GGGTGTGCAGGTTACGATAGAAATTTATCTCCTTCTTaGGCTCCTGCTTGTTCTCTCGGGCCTCCATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GCAGYDRNLSPS*APACSLGPPCS Trigger: AGAACATGGAGGCCCGAGAGAACAAGCAGGAGCTCAAGAAGGAGATAAATTTCTATCGTAACCTGCACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053257.10 ENSMUST00000155721.2 |
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| CDS CCA 72 bp | CGATCTCTCAGCTCATTTGTCTCCTCGGTAGTGAGCTaGATCTTTTTGATCAGCTCCTTCTCTTCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSLSSFVSSVVS*IFLISSFSSFS Trigger: TGAGAAGGAAGAGAAGGAGCTGATCAAAAAGATCCAGCTCACTACCGAGGAGACAAATGAGCTGAGAGATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053257.10 ENSMUST00000155721.2 |
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| CDS CCA 72 bp | CTTCTGAGACCTGATGTTCTTGAGTCTTCAGGTTGCTaGTCTTCTCCTGTTTGTCTTTACCACTCAGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LLRPDVLESSGC*SSPVCLYHSGS Trigger: TGAACCTGAGTGGTAAAGACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAGAACATCAGGTCTCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053257.10 |
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| CDS CCA 72 bp | TTGTCCCTACCTGATGTTCTTGAGTCTTCAGGTTGCTaGTCTTCTCCTGTTTGTCTTTACCACTCAGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSLPDVLESSGC*SSPVCLYHSGS Trigger: TGAACCTGAGTGGTAAAGACAAACAGGAGAAGACCAGCAACCTGAAGACTCAAGAACATCAGGTAGGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155721.2 |
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| CDS GCA 72 bp | ATGGCCCAATTAGCTAGTACTTCCTTGCTCTCCTGCTaGAATATCGCCAACTTCTTCTTTATAAGATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: MAQLASTSLLSC*NIANFFFIRFS Trigger: GGAGAATCTTATAAAGAAGAAGTTGGCGATATTGCAGCAGGAGAGCAAGGAAGTACTAGCTAATTGGGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053257.10 ENSMUST00000155721.2 |
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