Pregenerated sensors for SPEER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067855Ensembl transcript IDs: ENSMUST00000124677.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTaGCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCAC | + |
Preference number: 1 (lower is better) Translates to: LLLEGQSPQSSLKGC*QNRKGNNTLNQLAH Trigger: GTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CCA 90 bp | TCACTGCATATTAAGAAGTACAGACCTACAGCCTGTATCTCCTCTTaGACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGG | + |
Preference number: 1 (lower is better) Translates to: SLHIKKYRPTACISS*TAVGGAVTSVLTQG Trigger: CCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAGGAGATACAGGCTGTAGGTCTGTACTTCTTAATATGCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR GCA 90 bp | AACCAAACATTAACAGAAAATTATTGTCCATCAGCACCCTTTCACTaGATATTAAGAAGTACAGACCTACAGCCTGTATCTCCTCTTGGA | + |
Preference number: 1 (lower is better) Translates to: NQTLTENYCPSAPFH*ILRSTDLQPVSPLG Trigger: TCCAAGAGGAGATACAGGCTGTAGGTCTGTACTTCTTAATATGCAGTGAAAGGGTGCTGATGGACAATAATTTTCTGTTAATGTTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CAA 90 bp | ACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTaGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCA | + |
Preference number: 2 (lower is better) Translates to: TAVGGAVTSVLTQGV*PEQEREQHPESAGS Trigger: TGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CAA 90 bp | TTAAGAAGTACAGACCTACAGCCTGTATCTCCTCTTGGACTGCTGTaGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAG | + |
Preference number: 2 (lower is better) Translates to: LRSTDLQPVSPLGLL*EGQSPQSSLKGCCQ Trigger: CTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAGGAGATACAGGCTGTAGGTCTGTACTTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CCA 72 bp | CAGACCTACAGCCTGTATCTCCTCTTGGACTGCTGTTaGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGT | + |
Preference number: 3 (lower is better) Translates to: QTYSLYLLLDCC*RGSHLSPHSRG Trigger: ACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAGGAGATACAGGCTGTAGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR GCA 72 bp | GAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTaGCAGAACAGGAAAGGGAACAACACCCTGAATCAG | + |
Preference number: 3 (lower is better) Translates to: EGQSPQSSLKGC*QNRKGNNTLNQ Trigger: CTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR GCA 72 bp | GAAGTACAGACCTACAGCCTGTATCTCCTCTTGGACTaGTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCA | + |
Preference number: 3 (lower is better) Translates to: EVQTYSLYLLLD*CWRGSHLSPHS Trigger: TGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAGGAGATACAGGCTGTAGGTCTGTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR TCA 90 bp | GACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAGCAGCAGGGGGCTCCTaGGGCAGAAACTCATTGTGC | + |
Preference number: 4 (lower is better) Translates to: DCCWRGSHLSPHSRGVARAAGGS*GRNSLC Trigger: GCACAATGAGTTTCTGCCTCAGGAGCCCCCTGCTGC...TCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR GCA 90 bp | CTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACATGTTGGGGATGGAGTaGAGCAGGGGGCTCCTGAGG | + |
Preference number: 4 (lower is better) Translates to: LLLEGQSPQSSLKGCCQNMLGME*SRGLLR Trigger: CCTCAGGAGCCCCCTGCTGCACTCCATCCCCAACAT...GTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | CTCTTGGACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTTGTGGATGTTGGGGATaGAGTGCAGCAGGGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: LLDCCWRGSHLSPHSRGVCGCWG*SAAGGS Trigger: GGAGCCCCCTGCTGCACTCCATCCCCAACATCCACA...AACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR GCA 90 bp | CTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACTTCTGGGTAATGAGGTaGAGCTCTGTGGTCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: LLLEGQSPQSSLKGCCQNFWVMR*SSVVSL Trigger: GAGGCTGACCACAGAGCTGCACCTCATTACCCAGAA...GTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CAA 72 bp | ACAGACCTACAGCCTGTATCTCCTCTTGGACTGCTGTaGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGG | + |
Preference number: 4 (lower is better) Translates to: TDLQPVSPLGLL*EGQSPQSSLKG Trigger: CCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCAAGAGGAGATACAGGCTGTAGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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3UTR CAA 72 bp | GGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTaGCCAGAACAGGAAAGGGAACAACACCCTGAATCA | + |
Preference number: 4 (lower is better) Translates to: GGAVTSVLTQGV*PEQEREQHPES Trigger: TGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR GCA 90 bp | GCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGATCAGGCGATCTCTCTaGCCATTTCTCTTCTGGGTA | + |
Preference number: 4 (lower is better) Translates to: AVGGAVTSVLTQGVLPEQIRRSL*PFLFWV Trigger: TACCCAGAAGAGAAATGGGCAGAGAGATCGCCTGAT...CTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR GCA 90 bp | TGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGTTGGGTCTCATGGTTaGTGGTCTGCTCCTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: WRGSHLSPHSRGVARTGKVGSHG*WSAPVC Trigger: ACAAACAGGAGCAGACCAGCAACCATGAGACCCAAC...CTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | TGGACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCATCTTCTGGAAGGGCCTaGTCCTCTTTTTCATGGATC | + |
Preference number: 4 (lower is better) Translates to: WTAVGGAVTSVLTQGVLPSSGRA*SSFSWI Trigger: GATCCATGAAAAAGAGGACCAGGCCCTTCCAGAAGA...TGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | TGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACATGCCCATTTCTCTTCTaGGTAATGAGGTGCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: CCWRGSHLSPHSRGVARTCPFLF*VMRCSS Trigger: AGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCA...TGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | TCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGTAGACTGTGGATGTTaGGGATGGAGTGCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: SLKGCCQNRKGNNTLNQLVDCGC*GWSAAG Trigger: CCCTGCTGCACTCCATCCCCAACATCCACAGTCTAC...CAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | AAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCACCTCTCCCATCCACACTaGCTCTCCCAAAAAGATTGC | + |
Preference number: 4 (lower is better) Translates to: KGCCQNRKGNNTLNQLAHLSHPH*LSQKDC Trigger: GCAATCTTTTTGGGAGAGCCAGTGTGGATGGGAGAG...GTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | TGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACATTTCTTCCTGGGATGTaGACATTTCAGCTCTTGCTG | + |
Preference number: 4 (lower is better) Translates to: CCWRGSHLSPHSRGVARTFLPGM*TFQLLL Trigger: CAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAAA...TGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR TCA 90 bp | TGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACATGTTCACAGAGGACATaGGCTGGTTCTTCTTTAATG | + |
Preference number: 4 (lower is better) Translates to: CCWRGSHLSPHSRGVARTCSQRT*AGSSLM Trigger: CATTAAAGAAGAACCAGCTCATGTCCTCTGTGAACA...TGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR TCA 90 bp | TGGACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAAGTTTATCTCCTTCTTaGGCTCATGGATGTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: WTAVGGAVTSVLTQGVLPSLSPS*AHGCSL Trigger: AAGAGAACATCCATGAGCTCAAGAAGGAGATAAACT...TGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | TGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCACTGGCTTTGGGTGATATCTTTCTaGGAGCCCTCCACATTCTCC | + |
Preference number: 4 (lower is better) Translates to: CCQNRKGNNTLNQLAHWLWVISF*EPSTFS Trigger: GGAGAATGTGGAGGGCTCCCAGAAAGATATCACCCA...AAGCCAGTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | AGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACAAGTTGTTGGGTCTCATaGTTGCTGGTCTGCTCCTGT | + |
Preference number: 4 (lower is better) Translates to: SHLSPHSRGVARTGKGTTSCWVS*LLVCSC Trigger: ACAGGAGCAGACCAGCAACCATGAGACCCAACAACT...TGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR TCA 90 bp | CTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGATTCTTCTCCACCATaGGCTGGCTATGTAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: LTQGVLPEQEREQHPESADSSPP*AGYVGL Trigger: CAAACCTACATAGCCAGCTCATGGTGGAGAAGAATC...AGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | AAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCACAATGGATGTATCTTCTaGAAGGGCCTGGTCCTCTTT | + |
Preference number: 4 (lower is better) Translates to: KGCCQNRKGNNTLNQLAHNGCIF*KGLVLF Trigger: AAAGAGGACCAGGCCCTTCCAGAAGATACATCCATT...GTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | GCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGACAGAGGACATGAGCTaGTTCTTCTTTAATGATAGT | + |
Preference number: 4 (lower is better) Translates to: AVGGAVTSVLTQGVLPEQTEDMS*FFFNDS Trigger: ACTATCATTAAAGAAGAACCAGCTCATGTCCTCTGT...CTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | AGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACAAGGAGGCTTTCTTCCTaGGATGTGGACATTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: SHLSPHSRGVARTGKGTTRRLSS*DVDISA Trigger: AGCTGAAATGTCCACATCCCAGGAAGAAAGCCTCCT...TGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CCA 90 bp | CTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTTGGTCCTCTTTTTCATaGATCCCTCTTGGAAAGAGA | + |
Preference number: 4 (lower is better) Translates to: LTQGVLPEQEREQHPESAWSSFS*IPLGKR Trigger: TCTCTTTCCAAGAGGGATCCATGAAAAAGAGGACCA...AGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR TCA 90 bp | CTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTTCTCCATTTCCATTTTaGACTCCTTCTCACTTAGGT | + |
Preference number: 4 (lower is better) Translates to: LTQGVLPEQEREQHPESASPFPF*TPSHLG Trigger: ACCTAAGTGAGAAGGAGTTCAAAATGGAAATGGAGA...AGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGTAGACTGTGGATGTaGGGGATGGAGTGCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: WRGSHLSPHSRGVARTGKGRLWM*GMECSR Trigger: CCTGCTGCACTCCATCCCCAACATCCACAGTCTACC...CTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | GGACTGCTGTTGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGTGGACATTTCAGCTCTaGCTGGAGTCTCTGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: GLLLEGQSPQSSLKGCCQWTFQL*LESLSP Trigger: AGGACTCAGAGACTCCAGCAAGAGCTGAAATGTCCA...CTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCAACAGCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGCTGGTCTGCTCCTGTTaGTCTTTACCATTCAGGTTC | + |
Preference number: 5 (lower is better) Translates to: WRGSHLSPHSRGVARTGKLVCSC*SLPFRF Trigger: GAACCTGAATGGTAAAGACAAACAGGAGCAGACCAG...CTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 90 bp | CCACATTCTCCAAGTCCACCTCCTTCGTTCTTCATTACTCTCAGATaGAAGGCCAACATCCTTCCTCCTCTCTCTGGTCTCTCTCCCATC | + |
Preference number: 5 (lower is better) Translates to: PHSPSPPPSFFITLR*KANILPPLSGLSPI Trigger: GATGGGAGAGAGACCAGAGAGAGGAGGAAGGATGTTGGCCTTCCATCTGAGAGTAATGAAGAACGAAGGAGGTGGACTTGGAGAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 90 bp | CCCTCTTGGAAAGAGATCAGGCGATCTCTCTGCCCATTTCTCTTCTaGGTAATGAGGTGCAGCTCTGTGGTCAGCCTCTCCATTTCCATT | + |
Preference number: 5 (lower is better) Translates to: PSWKEIRRSLCPFLF*VMRCSSVVSLSISI Trigger: AATGGAAATGGAGAGGCTGACCACAGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCAGAGAGATCGCCTGATCTCTTTCCAAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS GCA 90 bp | GAGATCAGGCGATCTCTCTGCCCATTTCTCTTCTGGGTAATGAGGTaGAGCTCTGTGGTCAGCCTCTCCATTTCCATTTTGAACTCCTTC | + |
Preference number: 5 (lower is better) Translates to: EIRRSLCPFLFWVMR*SSVVSLSISILNSF Trigger: GAAGGAGTTCAAAATGGAAATGGAGAGGCTGACCACAGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCAGAGAGATCGCCTGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TGGAGGGGCAGTCACCTCAGTCCTCACTCAAGGGGTGTTGCCAGAACAGGAAAGGCTGGCTATGTAGGTTaGAATAGAAGTTTATCTCCT | + |
Preference number: 5 (lower is better) Translates to: WRGSHLSPHSRGVARTGKAGYVG*NRSLSP Trigger: AGGAGATAAACTTCTATTCAAACCTACATAGCCAGC...CTTTCCTGTTCTGGCAACACCCCTTGAGTGAGGACTGAGGTGACTGCCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TCACTCAAGGGGTGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGATCTCCAACTCTAAGTaGTTCACAGAGGACATGAGC | + |
Preference number: 5 (lower is better) Translates to: SLKGCCQNRKGNNTLNQLISNSK*FTEDMS Trigger: GCTCATGTCCTCTGTGAACAACTTAGAGTTGGAGAT...CAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACACCCCTTGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCACTGGCTTCTCTCCATTTCCATTTaGAACTCCTTCTCACTTAGG | + |
Preference number: 5 (lower is better) Translates to: CCQNRKGNNTLNQLAHWLLSISI*NSFSLR Trigger: CCTAAGTGAGAAGGAGTTCAAAATGGAAATGGAGAG...AAGCCAGTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS-3UTR CAA 90 bp | TGTTGCCAGAACAGGAAAGGGAACAACACCCTGAATCAGCTGGCTCACTGGCTTAAGTTTATCTCCTTCTaGAGCTCATGGATGTTCTCT | + |
Preference number: 5 (lower is better) Translates to: CCQNRKGNNTLNQLAHWLKFISF*SSWMFS Trigger: AGAGAACATCCATGAGCTCAAGAAGGAGATAAACTT...AAGCCAGTGAGCCAGCTGATTCAGGGTGTTGTTCCCTTTCCTGTTCTGGCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS TCA 72 bp | GTGGACATTTCAGCTCTTGCTGGAGTCTCTGAGTCCTaGAGTTGTTGGGTCTCATGGTTGCTGGTCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: VDISALAGVSES*SCWVSWLLVCS Trigger: GGAGCAGACCAGCAACCATGAGACCCAACAACTTCAGGACTCAGAGACTCCAGCAAGAGCTGAAATGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | AAAGAGATCAGGCGATCTCTCTGCCCATTTCTCTTCTaGGTAATGAGGTGCAGCTCTGTGGTCAGCCTCTCC | + |
Preference number: 6 (lower is better) Translates to: KEIRRSLCPFLF*VMRCSSVVSLS Trigger: GGAGAGGCTGACCACAGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCAGAGAGATCGCCTGATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS TCA 72 bp | GGTGCAGCTCTGTGGTCAGCCTCTCCATTTCCATTTTaGACTCCTTCTCACTTAGGTCACGTACAGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: GAALWSASPFPF*TPSHLGHVQWV Trigger: CACCCACTGTACGTGACCTAAGTGAGAAGGAGTTCAAAATGGAAATGGAGAGGCTGACCACAGAGCTGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | CCAAGTCCACCTCCTTCGTTCTTCATTACTCTCAGATaGAAGGCCAACATCCTTCCTCCTCTCTCTGGTCTC | + |
Preference number: 6 (lower is better) Translates to: PSPPPSFFITLR*KANILPPLSGL Trigger: GAGACCAGAGAGAGGAGGAAGGATGTTGGCCTTCCATCTGAGAGTAATGAAGAACGAAGGAGGTGGACTTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS GCA 72 bp | CGATCTCTCTGCCCATTTCTCTTCTGGGTAATGAGGTaGAGCTCTGTGGTCAGCCTCTCCATTTCCATTTTG | + |
Preference number: 6 (lower is better) Translates to: RSLCPFLFWVMR*SSVVSLSISIL Trigger: CAAAATGGAAATGGAGAGGCTGACCACAGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCAGAGAGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS GCA 72 bp | ATGGATCCCTCTTGGAAAGAGATCAGGCGATCTCTCTaGCCATTTCTCTTCTGGGTAATGAGGTGCAGCTCT | + |
Preference number: 6 (lower is better) Translates to: MDPSWKEIRRSL*PFLFWVMRCSS Trigger: AGAGCTGCACCTCATTACCCAGAAGAGAAATGGGCAGAGAGATCGCCTGATCTCTTTCCAAGAGGGATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | GAAACTCATTGTGCAGGAGGCTTTCTTCCTGGGATGTaGACATTTCAGCTCTTGCTGGAGTCTCTGAGTCCT | + |
Preference number: 6 (lower is better) Translates to: ETHCAGGFLPGM*TFQLLLESLSP Trigger: AGGACTCAGAGACTCCAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAAAGCCTCCTGCACAATGAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | GTACTGAATGTAAGAAGATTCATTCAAGGTAGACTGTaGATGTTGGGGATGGAGTGCAGCAGGGGGCTCCTG | + |
Preference number: 6 (lower is better) Translates to: VLNVRRFIQGRL*MLGMECSRGLL Trigger: CAGGAGCCCCCTGCTGCACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACATTCAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS GCA 72 bp | GAGTCTCTGAGTCCTGAAGTTGTTGGGTCTCATGGTTaGTGGTCTGCTCCTGTTTGTCTTTACCATTCAGGT | + |
Preference number: 6 (lower is better) Translates to: ESLSPEVVGSHG*WSAPVCLYHSG Trigger: ACCTGAATGGTAAAGACAAACAGGAGCAGACCAGCAACCATGAGACCCAACAACTTCAGGACTCAGAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CAA 90 bp | TGGGTAATGAGGTGCAGCTCTGTGGTCAGCCTCTCCATTTCCATTTaGAACTCCTTCTCACTTAGGTCACGTACAGTGGGTGATATCTTT | + |
Preference number: 6 (lower is better) Translates to: WVMRCSSVVSLSISI*NSFSLRSRTVGDIF Trigger: AAAGATATCACCCACTGTACGTGACCTAAGTGAGAAGGAGTTCAAAATGGAAATGGAGAGGCTGACCACAGAGCTGCACCTCATTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CAA 90 bp | AATGTACTGAATGTAAGAAGATTCATTCAAGGTAGACTGTGGATGTaGGGGATGGAGTGCAGCAGGGGGCTCCTGAGGCAGAAACTCATT | + |
Preference number: 6 (lower is better) Translates to: NVLNVRRFIQGRLWM*GMECSRGLLRQKLI Trigger: AATGAGTTTCTGCCTCAGGAGCCCCCTGCTGCACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACATTCAGTACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | TCTCTGAGTCCTGAAGTTGTTGGGTCTCATGGTTGCTaGTCTGCTCCTGTTTGTCTTTACCATTCAGGTTCA | + |
Preference number: 6 (lower is better) Translates to: SLSPEVVGSHGC*SAPVCLYHSGS Trigger: TGAACCTGAATGGTAAAGACAAACAGGAGCAGACCAGCAACCATGAGACCCAACAACTTCAGGACTCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CCA 72 bp | GTTGTTCATAGAATGGATGTATCTTCTGGAAGGGCCTaGTCCTCTTTTTCATGGATCCCTCTTGGAAAGAGA | + |
Preference number: 6 (lower is better) Translates to: VVHRMDVSSGRA*SSFSWIPLGKR Trigger: TCTCTTTCCAAGAGGGATCCATGAAAAAGAGGACCAGGCCCTTCCAGAAGATACATCCATTCTATGAACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS TCA 72 bp | TACCATTCAGGTTCAAGTCAACCAAATATTTCTCAATaGGAGCCCAATCAATCTGTACTTCCTCGCTCTCCC | + |
Preference number: 6 (lower is better) Translates to: YHSGSSQPNISQ*EPNQSVLPRSP Trigger: GGGAGAGCGAGGAAGTACAGATTGATTGGGCTCTCATTGAGAAATATTTGGTTGACTTGAACCTGAATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |
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CDS CAA 72 bp | AGTTGTTGGGTCTCATGGTTGCTGGTCTGCTCCTGTTaGTCTTTACCATTCAGGTTCAAGTCAACCAAATAT | + |
Preference number: 6 (lower is better) Translates to: SCWVSWLLVCSC*SLPFRFKSTKY Trigger: ATATTTGGTTGACTTGAACCTGAATGGTAAAGACAAACAGGAGCAGACCAGCAACCATGAGACCCAACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124677.2 |