Pregenerated sensors for SPEER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095829Ensembl transcript IDs: ENSMUST00000172106.9, ENSMUST00000179482.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGTAGACTGTGGATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTaGGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTG | + |
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Preference number: 1 (lower is better) Translates to: KVDCGCWGWSSAGGS*GGNSFCRRLSSWDV Trigger: CACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATCCACAGTCTACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR CCA 90 bp | CCTGAGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTaGACATTTCAGCTCTTGCTGGAGTCGCTGAGTCCTGAAGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PEVEIHSAGGSLPGM*TFQLLLESLSPEVV Trigger: AACAACTTCAGGACTCAGCGACTCCAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR CCA 90 bp | CTTGTAAATGTACTGAGTGTAAGAAGATTCATTCAAGGTAGACTGTaGATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LVNVLSVRRFIQGRL*MLGMEFSRGLLRWK Trigger: TTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACACTCAGTACATTTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATTCTGCATCTTGCTGGAGTCGCTaGGTCCTGAAGTTGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: DVGDGVQQGAPEVEIHSASCWSR*VLKLLG Trigger: ACCCAACAACTTCAGGACTCAGCGACTCCAGCAAGA...TGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR-3UTR CCA 90 bp | GAACAACACCCTAAATCAGCTGGCTCACTGGCTTCCTCCCATTCACACCTTGTAAGGGGGCTCCTGAGGTaGAAATTCATTCTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: EQHPKSAGSLASSHSHLVRGLLR*KFILQE Trigger: CTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCT...TACAAGGTGTGAATGGGAGGAAGCCAGTGAGCCAGCTGATTTAGGGTGTTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR CAA 90 bp | AATGTACTGAGTGTAAGAAGATTCATTCAAGGTAGACTGTGGATGTaGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATT | + |
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Preference number: 2 (lower is better) Translates to: NVLSVRRFIQGRLWM*GMEFSRGLLRWKFI Trigger: AATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACACTCAGTACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGTAAGAAGATTCATTCAAGGTAGACTGTGGATGTTGGGGATGGAGTTCTCTCTTCCTGGGATGTaGACATTTCAGCTCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSVRRFIQGRLWMLGMEFSLPGM*TFQLLL Trigger: CAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAGA...GAACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR TCA 72 bp | TGTGGATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTaGGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: CGCWGWSSAGGS*GGNSFCRRLSS Trigger: GGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR CCA 72 bp | ATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTaGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MLGMEFSRGLLR*KFILQEALFLG Trigger: TCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCCATTCACACCTTGTAAATGTACTGAGTGTAAGAAGATTCATTCAAGGTGGACATTTCAGCTCTaGCTGGAGTCGCTGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: FLPFTPCKCTECKKIHSRWTFQL*LESLSP Trigger: AGGACTCAGCGACTCCAGCAAGAGCTGAAATGTCCA...CCTTGAATGAATCTTCTTACACTCAGTACATTTACAAGGTGTGAATGGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | GGGGCTCCTGAGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGGGAGGTGCAGCTCTGTaGTCAGCCTCTCTTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAPEVEIHSAGGSLPGMWGGAAL*SASLFP Trigger: AGGAAAAAGAGAGGCTGACCACAGAGCTGCACCTCC...CCACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR GCA 90 bp | TCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGACATTTCAGCTCTTGCTGGAAGCTGGATGAGGAGGTaGAGCTCTGTGGTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SFCRRLSSWDVDISALAGSWMRR*SSVVSL Trigger: GAGGCTGACCACAGAGCTGCACCTCCTCATCCAGCT...TCCAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAGAGCCTCCTGCAGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATTCTGCAGGAGGCTCACTTATTGAGCTCCTaGATATTCTCTTGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GMEFSRGLLRWKFILQEAHLLSS*IFSWAS Trigger: TGAGGCCCAAGAGAATATCCAGGAGCTCAATAAGTG...AGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| 3UTR CAA 72 bp | AGTGTAAGAAGATTCATTCAAGGTAGACTGTGGATGTaGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVRRFIQGRLWM*GMEFSRGLLRW Trigger: CCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATCCACAGTCTACCTTGAATGAATCTTCTTACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR TCA 90 bp | GGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATTCTGCAGGAGGCTAATTGGAACTCTGTTTaGAATCGATCAGGTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: GMEFSRGLLRWKFILQEANWNSV*NRSGDL Trigger: GAGATCACCTGATCGATTTCAAACAGAGTTCCAATT...AGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR GCA 90 bp | TCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGACATTTCAGCTCTTGCTGGACCCATCTCTAACTTATaGACAGAAGACAGGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFCRRLSSWDVDISALAGPISNL*TEDRTW Trigger: CCAGGTCCTGTCTTCTGTGCATAAGTTAGAGATGGG...TCCAGCAAGAGCTGAAATGTCCACATCCCAGGAAGAGAGCCTCCTGCAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | GGGGCTCCTGAGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGCAGTTGTTCATAGAATaGATTTTTCTTCTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GAPEVEIHSAGGSLPGMWQLFIE*IFLLGG Trigger: CCCACCCAGAAGAAAAATCCATTCTATGAACAACTG...CCACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAGGAGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | GATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATTCTGCAACTTCCTTGTTCTTCTaGTTCTGTGTGACAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: DVGDGVQQGAPEVEIHSATSLFF*FCVTGI Trigger: GATGCCTGTCACACAGAACCAGAAGAACAAGGAAGT...TGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR TCA 90 bp | GATGTTGGGGATGGAGTTCAGCAGGGGGCTCCTGAGGTGGAAATTCATTCTGCATTGAAATCGATCAGGTaGTCTCTCTGCTCATTTCTC | + |
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Preference number: 4 (lower is better) Translates to: DVGDGVQQGAPEVEIHSALKSIR*SLCSFL Trigger: GAGAAATGAGCAGAGAGATCACCTGATCGATTTCAA...TGCAGAATGAATTTCCACCTCAGGAGCCCCCTGCTGAACTCCATCCCCAACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | TGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGACATTTCAGCTCTTTAGGTCAGGTGCAGTaGATGATGTGTGTCTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: WKFILQEALFLGCGHFSSLGQVQ*MMCVFE Trigger: CTCGAAGACACACATCATCCACTGCACCTGACCTAA...AGAGCTGAAATGTCCACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | CTGAGGTGGAAATTCATTCTGCAGGAGGCTCTCTTCCTGGGATGTGGACATTTCGATTTTTCTTCTGGGTaGGCTTGGTCCTATTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LRWKFILQEALFLGCGHFDFSSG*AWSYCN Trigger: ATTACAATAGGACCAAGCCCACCCAGAAGAAAAATC...GAAATGTCCACATCCCAGGAAGAGAGCCTCCTGCAGAATGAATTTCCACCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | GAACAACACCCTAAATCAGCTGGCTCACTGGCTTCCTCCCATTCACACCTTGTATTCTCCATCAAGAGCTaGCTATGTAGGTTTGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: EQHPKSAGSLASSHSHLVFSIKS*LCRFVK Trigger: CTTTACAAACCTACATAGCCAGCTCTTGATGGAGAA...TACAAGGTGTGAATGGGAGGAAGCCAGTGAGCCAGCTGATTTAGGGTGTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR TCA 90 bp | TCCCATTCACACCTTGTAAATGTACTGAGTGTAAGAAGATTCATTCAAGGTAGACATTTCTCAGCTGGATaGGGAGGTGCAGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SHSHLVNVLSVRRFIQGRHFSAG*GGAALW Trigger: CCACAGAGCTGCACCTCCTCATCCAGCTGAGAAATG...TCTACCTTGAATGAATCTTCTTACACTCAGTACATTTACAAGGTGTGAATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR CCA 90 bp | CACCTTGTAAATGTACTGAGTGTAAGAAGATTCATTCAAGGTAGACTGTGGATGAATGGATTTTTCTTCTaGGTGGGCTTGGTCCTATTG | + |
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Preference number: 4 (lower is better) Translates to: HLVNVLSVRRFIQGRLWMNGFFF*VGLVLL Trigger: CAATAGGACCAAGCCCACCCAGAAGAAAAATCCATT...CATCCACAGTCTACCTTGAATGAATCTTCTTACACTCAGTACATTTACAAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS-3UTR TCA 90 bp | TTCCTCCCATTCACACCTTGTAAATGTACTGAGTGTAAGAAGATTCATTCAAGGCCAAATATTTCTCAATaGGAGCCCAATCAATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: FLPFTPCKCTECKKIHSRPNISQ*EPNQSL Trigger: TAGAGATTGATTGGGCTCTCATTGAGAAATATTTGG...CCTTGAATGAATCTTCTTACACTCAGTACATTTACAAGGTGTGAATGGGAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172106.9 |
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| CDS TCA 90 bp | CTCCTGTTCGTCCATTCAGGTTCAAGTCAACCAAATATTTCTCAATaGGAGCCCAATCAATCTCTACTTCCTTGTTCTTCTGGTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLFVHSGSSQPNISQ*EPNQSLLPCSSGSV Trigger: CACAGAACCAGAAGAACAAGGAAGTAGAGATTGATTGGGCTCTCATTGAGAAATATTTGGTTGACTTGAACCTGAATGGACGAACAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CCA 90 bp | TATTTCTCAATGAGAGCCCAATCAATCTCTACTTCCTTGTTCTTCTaGTTCTGTGTGACAGGCATCTTAAGATTCTTCTCCATCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: YFSMRAQSISTSLFF*FCVTGILRFFSIKS Trigger: GCTCTTGATGGAGAAGAATCTTAAGATGCCTGTCACACAGAACCAGAAGAACAAGGAAGTAGAGATTGATTGGGCTCTCATTGAGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS TCA 72 bp | CGATCAGGTGATCTCTCTGCTCATTTCTCAGCTGGATaGGGAGGTGCAGCTCTGTGGTCAGCCTCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSGDLSAHFSAG*GGAALWSASLF Trigger: AAAAAGAGAGGCTGACCACAGAGCTGCACCTCCTCATCCAGCTGAGAAATGAGCAGAGAGATCACCTGATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS TCA 72 bp | GGTGCAGCTCTGTGGTCAGCCTCTCTTTTTCCTTTTTaGACTCCTTCTTACTTAGGTCAGGTGCAGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: GAALWSASLFPF*TPSYLGQVQWM Trigger: CATCCACTGCACCTGACCTAAGTAAGAAGGAGTTCAAAAAGGAAAAAGAGAGGCTGACCACAGAGCTGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CAA 90 bp | TGGATGAGGAGGTGCAGCTCTGTGGTCAGCCTCTCTTTTTCCTTTTaGAACTCCTTCTTACTTAGGTCAGGTGCAGTGGATGATGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: WMRRCSSVVSLSFSF*NSFLLRSGAVDDVC Trigger: ACACACATCATCCACTGCACCTGACCTAAGTAAGAAGGAGTTCAAAAAGGAAAAAGAGAGGCTGACCACAGAGCTGCACCTCCTCATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CAA 72 bp | AGGTGCAGCTCTGTGGTCAGCCTCTCTTTTTCCTTTTaGAACTCCTTCTTACTTAGGTCAGGTGCAGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: RCSSVVSLSFSF*NSFLLRSGAVD Trigger: ATCCACTGCACCTGACCTAAGTAAGAAGGAGTTCAAAAAGGAAAAAGAGAGGCTGACCACAGAGCTGCACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CAA 90 bp | TCCCCATCTCTAACTTATGCACAGAAGACAGGACCTGGTTCTTCGTaGATCTCAGTTGTTCATAGAATGGATTTTTCTTCTGGGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPSLTYAQKTGPGSS*ISVVHRMDFSSGWA Trigger: AGCCCACCCAGAAGAAAAATCCATTCTATGAACAACTGAGATCAACGAAGAACCAGGTCCTGTCTTCTGTGCATAAGTTAGAGATGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS TCA 72 bp | GGGTGGGCTTGGTCCTATTGTAATTGGAACTCTGTTTaGAATCGATCAGGTGATCTCTCTGCTCATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GWAWSYCNWNSV*NRSGDLSAHFS Trigger: TGAGAAATGAGCAGAGAGATCACCTGATCGATTTCAAACAGAGTTCCAATTACAATAGGACCAAGCCCACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CAA 90 bp | TCAACCAAATATTTCTCAATGAGAGCCCAATCAATCTCTACTTCCTaGTTCTTCTGGTTCTGTGTGACAGGCATCTTAAGATTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: STKYFSMRAQSISTS*FFWFCVTGILRFFS Trigger: GGAGAAGAATCTTAAGATGCCTGTCACACAGAACCAGAAGAACAAGGAAGTAGAGATTGATTGGGCTCTCATTGAGAAATATTTGGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS TCA 72 bp | GTCCATTCAGGTTCAAGTCAACCAAATATTTCTCAATaGGAGCCCAATCAATCTCTACTTCCTTGTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VHSGSSQPNISQ*EPNQSLLPCSS Trigger: AGAAGAACAAGGAAGTAGAGATTGATTGGGCTCTCATTGAGAAATATTTGGTTGACTTGAACCTGAATGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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| CDS CAA 72 bp | CTAACTTATGCACAGAAGACAGGACCTGGTTCTTCGTaGATCTCAGTTGTTCATAGAATGGATTTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LTYAQKTGPGSS*ISVVHRMDFSS Trigger: AGAAGAAAAATCCATTCTATGAACAACTGAGATCAACGAAGAACCAGGTCCTGTCTTCTGTGCATAAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172106.9 ENSMUST00000179482.2 |
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