RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPECC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042331

Ensembl transcript IDs: ENSMUST00000049836.14, ENSMUST00000092415.9, ENSMUST00000108709.8, ENSMUST00000201015.4, ENSMUST00000201364.4, ENSMUST00000201624.4, ENSMUST00000201671.4, ENSMUST00000201723.4, ENSMUST00000202178.4, ENSMUST00000202179.2, ENSMUST00000202389.4, ENSMUST00000202744.4, ENSMUST00000202905.4

Found 979 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGACTGAGGAGAGGGCCGTTCCTCGGACCCTGTCCCTGTCGGTGTaGCCTCAGCACTGTCACCTGTCATCAGCTCAGACACCACTCAGC +
Preference number: 1 (lower is better)
Translates to: GTEERAVPRTLSLSV*PQHCHLSSAQTPLS
Trigger: GCTGAGTGGTGTCTGAGCTGATGACAGGTGACAGTGCTGAGGCCACACCGACAGGGACAGGGTCCGAGGAACGGCCCTCTCCTCAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 90 bp TCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTaGCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: SPLGARVAEHRLQAC*LWSAWWGMEEAALP
Trigger: AGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 90 bp GCCTGTGGCCCCAAGAGGCTACAACAGTTTGAGAATCAGCGCTGCTaGACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: ACGPKRLQQFENQRC*TQLPPIRGMDWREG
Trigger: TCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGGGGCCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR GCA 90 bp GGAGCCTGTGGCCCCAAGAGGCTACAACAGTTTGAGAATCAGCGCTaGTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: GACGPKRLQQFENQR*CTQLPPIRGMDWRE
Trigger: CTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGGGGCCACAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 90 bp GTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTaGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: VAEHRLQACCLWSAW*GMEEAALPLDGVLA
Trigger: GGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp GGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTaGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACC +
Preference number: 1 (lower is better)
Translates to: GLVSARRARVGCTRD*QHWNLTEEGLGLGT
Trigger: GGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTaGTGGCCCACTTGGCTTGAGCTTTCCTTGGAAATCCAGGTGGTG +
Preference number: 1 (lower is better)
Translates to: PHGGAWKRQLCLSME*WPTWLELSLEIQVV
Trigger: CACCACCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 90 bp CATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTaGCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTG +
Preference number: 1 (lower is better)
Translates to: HVASGPHGGAWKRQL*LSMECWPTWLELSL
Trigger: CAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp CTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATaGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGAAATCCAGG +
Preference number: 1 (lower is better)
Translates to: LVRMVGHGRGSSASR*SAGPLGLSFPWKSR
Trigger: CCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATaGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: RVAEHRLQACCLWSA*WGMEEAALPLDGVL
Trigger: CAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp CTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTaGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGAT +
Preference number: 1 (lower is better)
Translates to: LGARVAEHRLQACCL*SAWWGMEEAALPLD
Trigger: ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp ACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAGTGTaGTACCATGTCAGAGCGCCAGAGCAGAGTGCTATCTGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: TLELFPDPEPPHAAV*YHVRAPEQSAICLP
Trigger: GGGCAGGCAGATAGCACTCTGCTCTGGCGCTCTGACATGGTACCACACTGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 90 bp GCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTaGCTTGAGCTTTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: AWKRQLCLSMECWPT*LELSLEIQVVRWWA
Trigger: TGCCCACCACCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp CATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTaGCCCACTTGGCTTGAGCTTTCCTTGGAAATCCAGGTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: HGGAWKRQLCLSMEC*PTWLELSLEIQVVR
Trigger: CCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTaGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCT +
Preference number: 1 (lower is better)
Translates to: TQRVRSGAASLETPH*EQGLLNIGSRHVAS
Trigger: AGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp TCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTaGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGTG +
Preference number: 1 (lower is better)
Translates to: SARRARVGCTRDWQH*NLTEEGLGLGTQHV
Trigger: CACATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp TGTACTCAGGCTGTGTGGTTCATGTGCACGCCAGCTGGCCTCCCGTaGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACACTCGAGGA +
Preference number: 1 (lower is better)
Translates to: CTQAVWFMCTPAGLP*TISKAPKAPLHTRG
Trigger: TCCTCGAGTGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCGTGCACATGAACCACACAGCCTGAGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 90 bp ACACCAGACCTGTACTCAGGCTGTGTGGTTCATGTGCACGCCAGCTaGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCA +
Preference number: 1 (lower is better)
Translates to: TPDLYSGCVVHVHAS*PPVDHQQGTKGSFA
Trigger: TGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCGTGCACATGAACCACACAGCCTGAGTACAGGTCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 90 bp GAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTaGGCTTTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCA +
Preference number: 1 (lower is better)
Translates to: EEAALPLDGVLAHLA*AFLGNPGGEVVGIA
Trigger: TGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 90 bp ATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTaGACAAGGGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: MESEGLVSARRARVG*TRDWQHWNLTEEGL
Trigger: CAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 90 bp CCAAGAGGCTACAACAGTTTGAGAATCAGCGCTGCTGCACCCAGCTaGCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAG +
Preference number: 1 (lower is better)
Translates to: PRGYNSLRISAAAPS*HPSEGWTGGRDRTQ
Trigger: CTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 90 bp TGGAGGGTCAGGCATGCAGTTGCTAGGAGTCCCAGGGGAACTGGATaGAGCCACAGCCAAGAACTACAGATAGAGCCTGAAGGTGGAGCC +
Preference number: 1 (lower is better)
Translates to: WRVRHAVARSPRGTG*SHSQELQIEPEGGA
Trigger: GGCTCCACCTTCAGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCTAGCAACTGCATGCCTGACCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 90 bp GAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTaGGCTGCACAAGGGACTGGCAACACTGGAATCTCACAGAAGAGG +
Preference number: 1 (lower is better)
Translates to: ETWRVKGWCQHVEHV*AAQGTGNTGISQKR
Trigger: CCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 90 bp AGAATAGCTGAAGTCATAGGCAGGGGCACCGTGCTTGGCAGGACATaGCTTTCTCTCTCCCAGCCATGGCTTGAATTCTGGATGCCCTAC +
Preference number: 1 (lower is better)
Translates to: RIAEVIGRGTVLGRT*LSLSQPWLEFWMPY
Trigger: GTAGGGCATCCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCCATGTCCTGCCAAGCACGGTGCCCCTGCCTATGACTTCAGCTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 90 bp CACCGTGCTTGGCAGGACATGGCTTTCTCTCTCCCAGCCATGGCTTaGATTCTGGATGCCCTACAAAAGCTGAGGAGCAACTGGATGAAG +
Preference number: 1 (lower is better)
Translates to: HRAWQDMAFSLPAMA*ILDALQKLRSNWMK
Trigger: CTTCATCCAGTTGCTCCTCAGCTTTTGTAGGGCATCCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCCATGTCCTGCCAAGCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 90 bp CAGACTCCATCTTTGCTAGGTTCCAGTTATTCTGACTCACCTGATTaGAGGGTCAGGCATGCAGTTGCTAGGAGTCCCAGGGGAACTGGA +
Preference number: 1 (lower is better)
Translates to: QTPSLLGSSYSDSPD*RVRHAVARSPRGTG
Trigger: TCCAGTTCCCCTGGGACTCCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAAAGATGGAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 90 bp CCAGACTGGCCTTCAAATCATAGCGATCCACCTGCCTCTGTTTCCTaGGTACTAGGAATAAAGGTGTGCACCACCAACACTCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: PDWPSNHSDPPASVS*VLGIKVCTTNTQQG
Trigger: TCCCTGCTGAGTGTTGGTGGTGCACACCTTTATTCCTAGTACTCAGGAAACAGAGGCAGGTGGATCGCTATGATTTGAAGGCCAGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR GCA 90 bp CTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAAGTaGCTACACTTACAAGGAACTGTAAGGTGTTCAGTGACTGGCATG +
Preference number: 1 (lower is better)
Translates to: LRQTGFQSQGGWAPK*LHLQGTVRCSVTGM
Trigger: CATGCCAGTCACTGAACACCTTACAGTTCCTTGTAAGTGTAGGCACTTTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 90 bp CATGGTTTAACTTCTCAAGGTCTTGCATTCTGCAGGTCTCTCTTGTaGTTAGCTGAGGGCAGAGGGGAAACACACGGCCATGGAGGCTTT +
Preference number: 1 (lower is better)
Translates to: HGLTSQGLAFCRSLL*LAEGRGETHGHGGF
Trigger: AAAGCCTCCATGGCCGTGTGTTTCCCCTCTGCCCTCAGCTAAGCACAAGAGAGACCTGCAGAATGCAAGACCTTGAGAAGTTAAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 90 bp GACAAACAAAACCACAGCAAAACCACAAAGTACCAAAGCCGGGCATaGTGTCTAATCTCAGCACCTGGGAGGCAGAGGCAGGAAGATCAG +
Preference number: 1 (lower is better)
Translates to: DKQNHSKTTKYQSRA*CLISAPGRQRQEDQ
Trigger: CTGATCTTCCTGCCTCTGCCTCCCAGGTGCTGAGATTAGACACCATGCCCGGCTTTGGTACTTTGTGGTTTTGCTGTGGTTTTGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 90 bp GGCGCGAAGCATAAAGCCAAAAGCATCAGGGATATGAGCACTTCCTaGACTGTCCATAGAAGAAGGATCCTGGGCATAGGTCAGGACATG +
Preference number: 1 (lower is better)
Translates to: GAKHKAKSIRDMSTS*TVHRRRILGIGQDM
Trigger: CATGTCCTGACCTATGCCCAGGATCCTTCTTCTATGGACAGTTCAGGAAGTGCTCATATCCCTGATGCTTTTGGCTTTATGCTTCGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CCA 90 bp CTGGTATTCTTAGCTGGTCAGTTTTCCATATTCCCTTTTGTACCCTaGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAGTGTGGT +
Preference number: 1 (lower is better)
Translates to: LVFLAGQFSIFPFVP*SSSQTLNLHMQQCG
Trigger: ACCACACTGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAATATGGAAAACTGACCAGCTAAGAATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 90 bp GAGGGGCATATTTGGAAAGGCCTCCCTGAGCACAGGACGCACAGATaGAATAAACAACGGAAAGTGACATTTCCATTCAGTTGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: EGHIWKGLPEHRTHR*NKQRKVTFPFSWKE
Trigger: TTCTTTCCAACTGAATGGAAATGTCACTTTCCGTTGTTTATTTCATCTGTGCGTCCTGTGCTCAGGGAGGCCTTTCCAAATATGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 90 bp GCCTCCCTGAGCACAGGACGCACAGATGAAATAAACAACGGAAAGTaGCATTTCCATTCAGTTGGAAAGAATTATTCTGGTAATAAATTA +
Preference number: 1 (lower is better)
Translates to: ASLSTGRTDEINNGK*HFHSVGKNYSGNKL
Trigger: TAATTTATTACCAGAATAATTCTTTCCAACTGAATGGAAATGTCACTTTCCGTTGTTTATTTCATCTGTGCGTCCTGTGCTCAGGGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR GCA 90 bp AAAACATTCAATAGTACCCAGAGGAAAGACAGATTGATACATAACTaGAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCT +
Preference number: 1 (lower is better)
Translates to: KTFNSTQRKDRLIHN*KYRCALEVEVASFS
Trigger: AGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTATCAATCTGTCTTTCCTCTGGGTACTATTGAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CCA 90 bp TCAGTTGGAAAGAATTATTCTGGTAATAAATTATTCTGGCTTGACTaGCTATGCATATGGAAGAAAAAGGGCTGTATGTTACATCAGGCT +
Preference number: 1 (lower is better)
Translates to: SVGKNYSGNKLFWLD*LCIWKKKGCMLHQA
Trigger: AGCCTGATGTAACATACAGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAGAATAATTCTTTCCAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCATGGGGACCCAGCGTGTaGGGAGTGGGGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAWGPSV*GVGLPL
Trigger: GAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCA...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGGGACCCAGCGTGTaGGGAGTGGGGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: ESEGLVSARRARVGCTRDWGPSV*GVGLPL
Trigger: GAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCA...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp GTGTGGGACAGCACTTCCCTCTCCCCGCTGGGCAGAGCAGAAGTCCAGAGACAGCCGCATGGTGGGGCATaGAAGAGGCAGCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: VWDSTSLSPLGRAEVQRQPHGGA*KRQLCL
Trigger: GAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG...CTGTCTCTGGACTTCTGCTCTGCCCAGCGGGGAGAGGGAAGTGCTGTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTCCGCATGGTGGGGCATaGAAGAGGCAGCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTPHGGA*KRQLCL
Trigger: GAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCTCACAGAAGAGGGCCTaGGTTTGGGGACCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGSQKRA*VWGPSV
Trigger: CACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGA...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACACACGTAGAGCACGTGTaGGCTGCACAAGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: RQLASRGPSARHQRLLCTHVEHV*AAQGTG
Trigger: GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTG...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GTGTGGGACAGCACTTCCCTCTCCCCGCTGGGCAGAGCAGAAGTCCAGAGACAGTGGAAATCCAGGTGGTaGGGTGGTGGGCATAGCAGG +
Preference number: 2 (lower is better)
Translates to: VWDSTSLSPLGRAEVQRQWKSRW*GGGHSR
Trigger: CCTGCTATGCCCACCACCTCACCACCTGGATTTCCA...CTGTCTCTGGACTTCTGCTCTGCCCAGCGGGGAGAGGGAAGTGCTGTCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCTGGGGACCCAGCGTGTaGGGAGTGGGGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGWGPSV*GVGLPL
Trigger: GAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCA...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAAAGAGACATGGAGAGTaGAGGGCTGGTGTCAGCACG +
Preference number: 2 (lower is better)
Translates to: RQLASRGPSARHQRLLCTKRHGE*RAGVST
Trigger: CGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTT...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGATGCCTCTGGTCCGCATaGTGGGGCATGGAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGCLWSA*WGMEEA
Trigger: TGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCACCAGCGTGTGAGGAGTaGGGCTGCCTCTCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPPACEE*GCLSRN
Trigger: GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGG...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CAA 90 bp AGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTaGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGT +
Preference number: 2 (lower is better)
Translates to: RSGAASLETPHWEQG*LNIGSRHVASGPHG
Trigger: ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR TCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGGAAATCCAGGTGGTaGGGTGGTGGGCATAGCAGG +
Preference number: 2 (lower is better)
Translates to: KRQLCLSMECWPTWLELSWKSRW*GGGHSR
Trigger: CCTGCTATGCCCACCACCTCACCACCTGGATTTCCA...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCCCGCATGGTGGGGCATaGAAGAGGCAGCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGPHGGA*KRQLCL
Trigger: GAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAAGGGACTGGCAACACTaGAATCTCACAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: RQLASRGPSARHQRLLCTRDWQH*NLTEEG
Trigger: GCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCT...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCCATGTGCACGCCAGCTaGCCTCCCGTGGACCATCAG +
Preference number: 2 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGHVHAS*PPVDHQ
Trigger: CTGATGGTCCACGGGAGGCCAGCTGGCGTGCACATG...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAGAGTCCCAGGGGAACTaGATGGAGCCACAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQESQGN*MEPQPR
Trigger: TCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTC...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAAAGAGACATGGAGAGTaGAGGGCTGGTGTCAGCACG +
Preference number: 2 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQKRHGE*RAGVST
Trigger: CGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTT...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR GCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCGAGAATCAGCGCTGCTaGACCCAGCTGCCACCCATC +
Preference number: 2 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGENQRC*TQLPPI
Trigger: GATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTC...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp AGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTTGCCTCTGGTCCGCATaGTGGGGCATGGAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: RSPRGTGWSHSQELQIEPCLWSA*WGMEEA
Trigger: TGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA...AGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGGACTGGCAACACTaGAATCTCACAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPRDWQH*NLTEEG
Trigger: GCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCT...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACCCTCCAGGGCCAGGGCGTGTGGGACAGGGAATaGCATAGGAGACAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: EVRQYPTLQVSSTLQGQGVWDRE*HRRQVS
Trigger: GCTCACTTGTCTCCTATGCCATTCCCTGTCCCACAC...GCCCTGGCCCTGGAGGGTAGAGGATACCTGGAGGGTAGGATACTGTCTTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGTGGAAATCCAGGTGGTaGGGTGGTGGGCATAGCAGG +
Preference number: 2 (lower is better)
Translates to: WAASLETSHCGISQKRAWWKSRW*GGGHSR
Trigger: CCTGCTATGCCCACCACCTCACCACCTGGATTTCCA...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR GCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAAGAGTGCTATCTGCCTaGCCTCTGCCTCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: IPFCTLELFPDPEPPHAARVLSA*PLPHPH
Trigger: ATGGGGGTGAGGCAGAGGGCAGGCAGATAGCACTCT...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACTGGAGAGTGAAGGGCTaGTGTCAGCACGTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADWRVKG*CQHVEH
Trigger: GTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAGAAGGAGAAGAGACATaGAGAGTGAAGGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQEGEET*RVKGWC
Trigger: ACACCAGCCCTTCACTCTCCATGTCTCTTCTCCTTC...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CAA 90 bp GTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTaGCTAGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: VPVILTHLIGGSGMQ*LGVPGELDGATAKN
Trigger: GTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTGGAAATCCAGGTGGTaGGGTGGTGGGCATAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQWKSRW*GGGHSR
Trigger: CCTGCTATGCCCACCACCTCACCACCTGGATTTCCA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR TCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACATCAGTTACACAGAGCTaGGCAAACTATTTCCCTAGT +
Preference number: 2 (lower is better)
Translates to: RQLASRGPSARHQRLLCTSVTQS*ANYFPS
Trigger: ACTAGGGAAATAGTTTGCTCAGCTCTGTGTAACTGA...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGAGAAACTTCCCATTGTaGAATCTCACAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGRNFPL*NLTEEG
Trigger: GCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCT...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCTGTACTCAGGCTGTGTaGTTCATGTGCACGCCAGCT +
Preference number: 2 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGCTQAV*FMCTPA
Trigger: AGCTGGCGTGCACATGAACCACACAGCCTGAGTACA...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACTTCCCTTTTGTACCCTaGAGCTCTTCCCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADFPFVP*SSSQTL
Trigger: CAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAA...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACGTCAGGGACTTCTGTTaGGTCCCACATATTAGGCAG +
Preference number: 2 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADVRDFC*VPHIRQ
Trigger: CTGCCTAATATGTGGGACTCAACAGAAGTCCCTGAC...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp AGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTGTCAGGGACTTCTGTTaGGTCCCACATATTAGGCAG +
Preference number: 2 (lower is better)
Translates to: RSPRGTGWSHSQELQIEPVRDFC*VPHIRQ
Trigger: CTGCCTAATATGTGGGACTCAACAGAAGTCCCTGAC...AGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR GCA 90 bp CACAGGAGACGTGCCGTAGGTTTTTGCCTGATGGGTTTGCTGAGTCAGATACAGGCCCGGGGCTTGCTATaGCACTATTCTCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: HRRRAVGFCLMGLLSQIQARGLL*HYSLCG
Trigger: CCCACAAAGAGAATAGTGGCATAGCAAGCCCCGGGC...CTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTTGCCTCTGGTCCGCATaGTGGGGCATGGAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVCLWSA*WGMEEA
Trigger: TGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTTCACAGAAGAGGGCCTaGGTTTGGGGACCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVSQKRA*VWGPSV
Trigger: CACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGA...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCTCTCAGGGGTTGCTGTaGACATGGTCCTTTCTCAAA +
Preference number: 2 (lower is better)
Translates to: MWLASLRQTGFQSQGGWASQGLL*TWSFLK
Trigger: TTTGAGAAAGGACCATGTCCACAGCAACCCCTGAGA...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACGCTGTCCACCAGTTCTaGAGAACTGTGAGAATCTGC +
Preference number: 2 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADAVHQF*RTVRIC
Trigger: GCAGATTCTCACAGTTCTCCAGAACTGGTGGACAGC...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CAA 90 bp GATCTTCTCTGGCGCCGCCTCTCACAGGAGACGTGCCGTAGGTTTTaGCCTGATGGGTTTGCTGAGTCAGATACAGGTCTTCACATACAT +
Preference number: 2 (lower is better)
Translates to: DLLWRRLSQETCRRF*PDGFAESDTGLHIH
Trigger: ATGTATGTGAAGACCTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTGAGAGGCGGCGCCAGAGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCGGTCAGGACATGCCATaGGCTGTATCTAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILGQDMP*AVSNRD
Trigger: GTCCCTGTTAGATACAGCCCATGGCATGTCCTGACC...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTTCACAGAAGAGGGCCTaGGATTGGGGACCCAGCATG +
Preference number: 2 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVSQKRA*DWGPSM
Trigger: CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGA...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGAGGGACTGGCAACACTaGAATCTCACAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQRDWQH*NLTEEG
Trigger: GCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCCCT...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAGCCTTCCCACCCTGTTaGACTGTTCAAATGTGCAAG +
Preference number: 2 (lower is better)
Translates to: IPFCTLELFPDPEPPHAAAFPPC*TVQMCK
Trigger: CTTGCACATTTGAACAGTCCAACAGGGTGGGAAGGC...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACCCTCCAGGGCCAGGGCTGTGAGCTTCTGCATTaGAAGTCTTTAAGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: EVRQYPTLQVSSTLQGQGCELLH*KSLSFQ
Trigger: CTGGAAACTTAAAGACTTTCAATGCAGAAGCTCACA...GCCCTGGCCCTGGAGGGTAGAGGATACCTGGAGGGTAGGATACTGTCTTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCTCAGTTACACAGAGCTaGGCAAACTATTTCCCTAGT +
Preference number: 2 (lower is better)
Translates to: MWLASLRQTGFQSQGGWASVTQS*ANYFPS
Trigger: ACTAGGGAAATAGTTTGCTCAGCTCTGTGTAACTGA...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCACATCCTCATTTGCTATaGAGTGCACATTTATTTGAC +
Preference number: 2 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAHPHLL*SAHLFD
Trigger: GTCAAATAAATGTGCACTTCATAGCAAATGAGGATG...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp CACAGGAGACGTGCCGTAGGTTTTTGCCTGATGGGTTTGCTGAGTCAGATACAGGTTGTGATGACTGTGTaGGACAGGGAATGGCATAGG +
Preference number: 2 (lower is better)
Translates to: HRRRAVGFCLMGLLSQIQVVMTV*DREWHR
Trigger: CCTATGCCATTCCCTGTCCCACACAGTCATCACAAC...CTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAGATTCACTAGAACTATaGTGGTTATTCTCAGGGGTT +
Preference number: 2 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQDSLEL*WLFSGV
Trigger: AACCCCTGAGAATAACCACCATAGTTCTAGTGAATC...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACCCTCCAGGGCCAGGGCATAAACAACGGAAAGTaGCATTTCCATTCAGTTGGA +
Preference number: 2 (lower is better)
Translates to: EVRQYPTLQVSSTLQGQGINNGK*HFHSVG
Trigger: TCCAACTGAATGGAAATGTCACTTTCCGTTGTTTAT...GCCCTGGCCCTGGAGGGTAGAGGATACCTGGAGGGTAGGATACTGTCTTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCACACCCAACTGTCTaGGAAAGGGGCATCCTCATT +
Preference number: 2 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVAHPTV*ERGILI
Trigger: AATGAGGATGCCCCTTTCTCAGACAGTTGGGTGTGC...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCAAGGAGGGGCATATTTaGAAAGGCCTCCCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGIKEGHI*KGLPEH
Trigger: GTGCTCAGGGAGGCCTTTCCAAATATGCCCCTCCTT...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCACCGCATGGTGGGGCATaGAAGAGGCAGCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSPHGGA*KRQLCL
Trigger: GAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGTTCCCTTTTGTACCCTaGAGCTCTTCCCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: VLVGDGKRILQIVITARRFPFVP*SSSQTL
Trigger: CAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAA...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CAA 90 bp TGTCTGGAACTAAAACGCAGTTTCTATTTCTGCCTTCCCACCCTGTaGGACTGTTCAAATGTGCAAGGAGCTCACCAGCACAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: CLELKRSFYFCLPTL*DCSNVQGAHQHRLL
Trigger: AAGCAGCCTGTGCTGGTGAGCTCCTTGCACATTTGAACAGTCCAACAGGGTGGGAAGGCAGAAATAGAAACTGCGTTTTAGTTCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAATCAAATGGGGACAGTaGGACCTATGCAGTGTAATT +
Preference number: 2 (lower is better)
Translates to: IPFCTLELFPDPEPPHAAIKWGQ*DLCSVI
Trigger: AATTACACTGCATAGGTCTCACTGTCCCCATTTGAT...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAATGCCTCTGGTCCGCATaGTGGGGCATGGAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SRISGESVTVLIAFIIRQCLWSA*WGMEEA
Trigger: TGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCATGGAAATCCAGGTGGTaGGGTGGTGGGCATAGCAGG +
Preference number: 2 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSWKSRW*GGGHSR
Trigger: CCTGCTATGCCCACCACCTCACCACCTGGATTTCCA...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCCCAGCGTGTGAGGAGTaGGGCTGCCTCTCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCPACEE*GCLSRN
Trigger: GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGG...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAATCACAGAAGAGGGCCTaGGATTGGGGACCCAGCATG +
Preference number: 2 (lower is better)
Translates to: SRISGESVTVLIAFIIRQSQKRA*DWGPSM
Trigger: CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGA...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTTTAAGTTTCCAGGGTaGGTTTCATTTGTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILFKFPG*VSFVRL
Trigger: AAGCCTCACAAATGAAACTCACCCTGGAAACTTAAA...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCACAGGACGCACAGATaGAATAAACAACGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGIHRTHR*NKQRKV
Trigger: CACTTTCCGTTGTTTATTTCATCTGTGCGTCCTGTG...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR GCA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAAAGAGCACGTGTGGGCTaGACAAGGGACTGGCAACAC +
Preference number: 2 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKRARVG*TRDWQH
Trigger: GTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCT...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR GCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGAGGGGCATCCTCATTTaGTATGAAGTGCACATTTAT +
Preference number: 2 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARRGILI*YEVHIY
Trigger: ATAAATGTGCACTTCATAGCAAATGAGGATGCCCCT...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGTGTGGGACAGGGAATaGCATAGGAGACAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: REREKKERERERTEFSEKVWDRE*HRRQVS
Trigger: GCTCACTTGTCTCCTATGCCATTCCCTGTCCCACAC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
3UTR-3UTR CCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTAGAAACTTCCCATTGTaGAATCTCACAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVRNFPL*NLTEEG
Trigger: GCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCT...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCATGGAGAGTGAAGGGCTaGTGTCAGCACGTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSWRVKG*CQHVEH
Trigger: GTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGTGTTTTTCTGTTCTGTaGGGTGCTGCTTTATTTTGG +
Preference number: 2 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARCFSVL*GAALFW
Trigger: CCAAAATAAAGCAGCACCCCACAGAACAGAAAAACA...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR GCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGAACTTCTCAAGGTCTTaGATTCTGCAGGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: VLVGDGKRILQIVITARRNFSRS*ILQVSL
Trigger: AAGAGAGACCTGCAGAATGCAAGACCTTGAGAAGTT...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCATGTACTCAGGCTGTGTaGTTCATGTGCACGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSCTQAV*FMCTPA
Trigger: AGCTGGCGTGCACATGAACCACACAGCCTGAGTACA...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR TCA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACTAAGGACAGAGTTTTaGCTGAAGCAAGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKLRTEF*LKQGQS
Trigger: GCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAG...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR GCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTCGTGCCGTAGGTTTTTaGCTGATGGGTTTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LVINYSGLTGYAYGRKRARAVGF*LMGLLS
Trigger: ACTCAGCAAACCCATCAGGCAAAAACCTACGGCACG...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAATACTTTTGACTGTGTaGTCGTGCAGTGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: REREKKERERERTEFSEKILLTV*SCSELI
Trigger: AATCAGCTCACTGCACGATCACACAGTCAAAAGTAT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
3UTR-3UTR TCA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGAGAGGGAAATACTTTTaGCTGTGTGATCGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMRGKYF*LCDRAV
Trigger: CACTGCACGATCACACAGTCAAAAGTATTTCCCTCT...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTAGGGGCAGGTTCAAATaGGGTAATGAAATGAGACTG +
Preference number: 2 (lower is better)
Translates to: LVINYSGLTGYAYGRKRARGRFK*GNEMRL
Trigger: CAGTCTCATTTCATTACCTCATTTGAACCTGCCCCT...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTGAATTCCAAGATTGTTaGATCCTGTGTTCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: YITANIAVHLKLKLRLSLEFQDC*ILCSSG
Trigger: CCCACTTGAACACAGGATTCAACAATCTTGGAATTC...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTTGCTGCAAGTAGCTTaGATTCCAAGATTGTTGAAT +
Preference number: 2 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKLLQVA*IPRLLN
Trigger: ATTCAACAATCTTGGAATTCAAGCTACTTGCAGCAA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTGGTGAGTTTCATTTGTaGGGCTTTTGTTGTAAGTTG +
Preference number: 2 (lower is better)
Translates to: YITANIAVHLKLKLRLSLGEFHL*GFCCKL
Trigger: CAACTTACAACAAAAGCCTCACAAATGAAACTCACC...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR GCA 90 bp AGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGAAGGGTACCATTTCCACTTTTAAGGCTCTCTaGTATAGAGAATGTGTATCT +
Preference number: 2 (lower is better)
Translates to: SQLGIFHQQWKLKKGTISTFKAL*YRECVS
Trigger: AGATACACATTCTCTATAGCAGAGAGCCTTAAAAGT...GGAAATGGTACCCTTCTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR TCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAATACTTTTGACTGTGTaGTCGTGCAGTGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKILLTV*SCSELI
Trigger: AATCAGCTCACTGCACGATCACACAGTCAAAAGTAT...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CAA 90 bp TCCATTCAGTTGGAAAGAATTATTCTGGTAATAAATTATTCTGGCTaGACTGGCTATGCATATGGAAGAAAAAGGGCTGTATGTTACATC +
Preference number: 2 (lower is better)
Translates to: SIQLERIILVINYSG*TGYAYGRKRAVCYI
Trigger: GATGTAACATACAGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAGAATAATTCTTTCCAACTGAATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CCA 72 bp AGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTaGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: RGPGFGDPACEE*GCLSRNSPLGA
Trigger: TGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCCACTGGGAGCAAGGGTaGCTGAACATAGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAHWEQG*LNIGSR
Trigger: CCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTG...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACGAAGAGGGCCTGGGTTaGGGGACCCAGCGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: ESEGLVSARRARVGCTRDEEGLG*GTQRVR
Trigger: CCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTC...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCGCTGGCCCACTTGGCTaGAGCTTTCCTTGGAAATCC +
Preference number: 3 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAAGPLG*SFPWKS
Trigger: GGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGC...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACCACTGGGAGCAAGGGTaGCTGAACATAGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNHWEQG*LNIGSR
Trigger: CCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTG...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 72 bp TCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTaGCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: SGPHGGAWKRQL*LSMECWPTWLE
Trigger: CTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp TCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATaGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: SRHVASGPHGGA*KRQLCLSMECW
Trigger: CCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp GAGAGGGCCGTTCCTCGGACCCTGTCCCTGTCGGTGTaGCCTCAGCACTGTCACCTGTCATCAGCTCAGACA +
Preference number: 3 (lower is better)
Translates to: ERAVPRTLSLSV*PQHCHLSSAQT
Trigger: TGTCTGAGCTGATGACAGGTGACAGTGCTGAGGCCACACCGACAGGGACAGGGTCCGAGGAACGGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCTGGCTTGAGCTTTCCTaGGAAATCCAGGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPWLELS*EIQVVR
Trigger: CCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCA...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 72 bp AGCAGTGTGGTACCATGTCAGAGCGCCAGAGCAGAGTaGTATCTGCCTGCCCTCTGCCTCACCCCCATCACC +
Preference number: 3 (lower is better)
Translates to: SSVVPCQSARAE*YLPALCLTPIT
Trigger: GGTGATGGGGGTGAGGCAGAGGGCAGGCAGATAGCACTCTGCTCTGGCGCTCTGACATGGTACCACACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp CATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTaGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGA +
Preference number: 3 (lower is better)
Translates to: HRLQACCLWSAW*GMEEAALPLDG
Trigger: TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp GCTGTGTGGTTCATGTGCACGCCAGCTGGCCTCCCGTaGACCATCAGCAAGGCACCAAAGGCTCCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: AVWFMCTPAGLP*TISKAPKAPLH
Trigger: GTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCGTGCACATGAACCACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCGAAGAGGGCCTGGGTTaGGGGACCCAGCGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGEEGLG*GTQRVR
Trigger: CCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTC...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 72 bp AGGTGGAGCCTGTGGCCCCAAGAGGCTACAACAGTTTaGGAATCAGCGCTGCTGCACCCAGCTGCCACCCAT +
Preference number: 3 (lower is better)
Translates to: RWSLWPQEATTV*ESALLHPAATH
Trigger: ATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGGGGCCACAGGCTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 72 bp ATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATaGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: MVGHGRGSSASR*SAGPLGLSFPW
Trigger: CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTaGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: RVAEHRLQACCL*SAWWGMEEAAL
Trigger: CAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGCTGGCCCACTTGGCTaGAGCTTTCCTTGGAAATCC +
Preference number: 3 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDAGPLG*SFPWKS
Trigger: GGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGC...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCATGGCTTGAGCTTTCCTaGGAAATCCAGGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPWLELS*EIQVVR
Trigger: CCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCA...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCAGAAGAGGGCCTGGGATaGGGGACCCAGCATGTGAGG +
Preference number: 3 (lower is better)
Translates to: IPFCTLELFPDPEPPHAAEEGLG*GTQHVR
Trigger: CCTCACATGCTGGGTCCCCAATCCCAGGCCCTCTTC...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 72 bp CTCTCCCCGCTGGGCAGAGCAGAAGTCCAGAGACAGTaGGGGCTGTCCTCAATGACATCAACACAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: LSPLGRAEVQRQ*GLSSMTSTQPV
Trigger: CACTGGCTGTGTTGATGTCATTGAGGACAGCCCTCACTGTCTCTGGACTTCTGCTCTGCCCAGCGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp GGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTaGTGGCCCACTTGGCTTGAGCTTTCCTTGGAAATC +
Preference number: 3 (lower is better)
Translates to: GAWKRQLCLSME*WPTWLELSLEI
Trigger: GATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR GCA 72 bp CCCAAGAGGCTACAACAGTTTGAGAATCAGCGCTGCTaGACCCAGCTGCCACCCATCAGAGGGATGGACTGG +
Preference number: 3 (lower is better)
Translates to: PKRLQQFENQRC*TQLPPIRGMDW
Trigger: CCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR CCA 72 bp AGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTaGCTTGAGCTTTCCTTGGAAATCCAGGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: RQLCLSMECWPT*LELSLEIQVVR
Trigger: CCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp GTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTaGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCAT +
Preference number: 3 (lower is better)
Translates to: VRSGAASLETPH*EQGLLNIGSRH
Trigger: ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAAGGCAAAAGCTGCGTTaGTTTTTCTGTTCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: RQLASRGPSARHQRLLCTRQKLR*FFCSVG
Trigger: CCCCACAGAACAGAAAAACAAACGCAGCTTTTGCCT...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp CTAAGGACAAACTCGGATGCTAAAGTGAGAAGGGACTaGGGAGAGGGCCGTTCCTCGGACCCTGTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: LRTNSDAKVRRD*GEGRSSDPVPV
Trigger: GACAGGGACAGGGTCCGAGGAACGGCCCTCTCCTCAGTCCCTTCTCACTTTAGCATCCGAGTTTGTCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp GGCGCCGCCTCTCACAGGAGACGTGCCGTAGGTTTTTaGCTGATGGGTTTGCTGAGTCAGATACAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: GAASHRRRAVGF*LMGLLSQIQVF
Trigger: GAAGACCTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTGAGAGGCGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CCA 72 bp GCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTaGCCCACTTGGCTTGAGCTTTCCTTGGAAATCCAG +
Preference number: 3 (lower is better)
Translates to: AWKRQLCLSMEC*PTWLELSLEIQ
Trigger: CTGGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp AGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTaGGCTGCACAAGGGACTGGCAACACTGGAATCTCA +
Preference number: 3 (lower is better)
Translates to: RVKGWCQHVEHV*AAQGTGNTGIS
Trigger: TGAGATTCCAGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CCA 72 bp CTCTTCCCAGACCCTGAACCTCCACATGCAGCAGTGTaGTACCATGTCAGAGCGCCAGAGCAGAGTGCTATC +
Preference number: 3 (lower is better)
Translates to: LFPDPEPPHAAV*YHVRAPEQSAI
Trigger: GATAGCACTCTGCTCTGGCGCTCTGACATGGTACCACACTGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp GAAGTCATAGGCAGGGGCACCGTGCTTGGCAGGACATaGCTTTCTCTCTCCCAGCCATGGCTTGAATTCTGG +
Preference number: 3 (lower is better)
Translates to: EVIGRGTVLGRT*LSLSQPWLEFW
Trigger: CCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCCATGTCCTGCCAAGCACGGTGCCCCTGCCTATGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 72 bp TGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTaGAGGTGGAGCCTGTGGCCCCAAGAGGCTACAACA +
Preference number: 3 (lower is better)
Translates to: WMEPQPRTTDRA*RWSLWPQEATT
Trigger: TGTTGTAGCCTCTTGGGGCCACAGGCTCCACCTTCAGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp AGGTCTTGCATTCTGCAGGTCTCTCTTGTGCTTAGCTaGGGGCAGAGGGGAAACACACGGCCATGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: RSCILQVSLVLS*GQRGNTRPWRL
Trigger: AAGCCTCCATGGCCGTGTGTTTCCCCTCTGCCCTCAGCTAAGCACAAGAGAGACCTGCAGAATGCAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp GTAGATCTTCTCTGGCGCCGCCTCTCACAGGAGACGTaGCGTAGGTTTTTGCCTGATGGGTTTGCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: VDLLWRRLSQET*RRFLPDGFAES
Trigger: TGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTGAGAGGCGGCGCCAGAGAAGATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CAA 90 bp ACCCTGTTGGACTGTTCAAATGTGCAAGGAGCTCACCAGCACAGGCTGCTTCACGCTGGCCCACTTGGCTaGAGCTTTCCTTGGAAATCC +
Preference number: 3 (lower is better)
Translates to: TLLDCSNVQGAHQHRLLHAGPLG*SFPWKS
Trigger: GGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGC...GTGAAGCAGCCTGTGCTGGTGAGCTCCTTGCACATTTGAACAGTCCAACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR GCA 72 bp GAGCCCACAAGGGCTGCTTCACCAATGCCCGGGGCTTaGTATGCCACTATTCTCTTTGTGGGATCTAGTTAC +
Preference number: 3 (lower is better)
Translates to: EPTRAASPMPGA*YATILFVGSSY
Trigger: GTAACTAGATCCCACAAAGAGAATAGTGGCATAGCAAGCCCCGGGCATTGGTGAAGCAGCCCTTGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CAA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACAGAGGCTACAACAGTTaGAGAATCAGCGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADRGYNS*RISAAA
Trigger: TGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCT...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR TCA 72 bp CCCTCTGCATGGCTGTCCACCAGTTCTGGAGAACTGTaGGAATCTGCAGACTCCATCTTTGCTAGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: PSAWLSTSSGEL*ESADSIFARFQ
Trigger: CTGGAACCTAGCAAAGATGGAGTCTGCAGATTCTCACAGTTCTCCAGAACTGGTGGACAGCCATGCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp TGGCAGGACATGGCTTTCTCTCTCCCAGCCATGGCTTaGATTCTGGATGCCCTACAAAAGCTGAGGAGCAAC +
Preference number: 3 (lower is better)
Translates to: WQDMAFSLPAMA*ILDALQKLRSN
Trigger: GTTGCTCCTCAGCTTTTGTAGGGCATCCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCCATGTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp GGTTTGTCTCTAAGGGTCTCAGTTCTCCATTTCTACTaGCCAGTGAGACTGGCATGTGTCTGGTGCTCGTGG +
Preference number: 3 (lower is better)
Translates to: GLSLRVSVLHFY*PVRLACVWCSW
Trigger: CCACGAGCACCAGACACATGCCAGTCTCACTGGCCAGTAGAAATGGAGAACTGAGACCCTTAGAGACAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp GGCCGTAAGTGGGTGCTGGGAACACTTCTCTTCAGATaGCTGGTGGTTCCCGCTTTCATTTGTGTTGGTAGT +
Preference number: 3 (lower is better)
Translates to: GRKWVLGTLLFR*LVVPAFICVGS
Trigger: ACTACCAACACAAATGAAAGCGGGAACCACCAGCCATCTGAAGAGAAGTGTTCCCAGCACCCACTTACGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGTGGCTTGAGCTTTCCTaGGAAATCCAGGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: ASLETSHCGISQKRAWVWWLELS*EIQVVR
Trigger: CCTCACCACCTGGATTTCCAAGGAAAGCTCAAGCCA...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR-3UTR CAA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCAGGCAAAAGCTGCGTTaGTTTTTCTGTTCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGRQKLR*FFCSVG
Trigger: CCCCACAGAACAGAAAAACAAACGCAGCTTTTGCCT...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGGCTAAGGACAGAGTTTaGACTGAAGCAAGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARAKDRV*TEARPE
Trigger: CTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGC...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGAAGTGCACATTTATTaGACGGAGAAAAGTAGCAAG +
Preference number: 3 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGEVHIY*TEKSSK
Trigger: CTTGCTACTTTTCTCCGTCAAATAAATGTGCACTTC...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR GCA 72 bp ACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAAGTaGCTACACTTACAAGGAACTGTAAGGTGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: TGFQSQGGWAPK*LHLQGTVRCSV
Trigger: CACTGAACACCTTACAGTTCCTTGTAAGTGTAGGCACTTTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp TCCCCACATGGTTTAACTTCTCAAGGTCTTGCATTCTaGAGGTCTCTCTTGTGCTTAGCTGAGGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: SPHGLTSQGLAF*RSLLCLAEGRG
Trigger: CCCTCTGCCCTCAGCTAAGCACAAGAGAGACCTGCAGAATGCAAGACCTTGAGAAGTTAAACCATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp TCTTTGCTAGGTTCCAGTTATTCTGACTCACCTGATTaGAGGGTCAGGCATGCAGTTGCTAGGAGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: SLLGSSYSDSPD*RVRHAVARSPR
Trigger: CCTGGGACTCCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR GCA 72 bp GGCTTTCTCTCTCCCAGCCATGGCTTGAATTCTGGATaGCCTACAAAAGCTGAGGAGCAACTGGATGAAGAA +
Preference number: 3 (lower is better)
Translates to: GFLSPSHGLNSG*PTKAEEQLDEE
Trigger: TTCTTCATCCAGTTGCTCCTCAGCTTTTGTAGGGCATCCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp AGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTaGGCCCCAAAGTGCCTACACTTACAAGGAACTGTA +
Preference number: 3 (lower is better)
Translates to: SLRQTGFQSQGG*APKCLHLQGTV
Trigger: TACAGTTCCTTGTAAGTGTAGGCACTTTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp TTAGCTGGTCAGTTTTCCATATTCCCTTTTGTACCCTaGAGCTCTTCCCAGACCCTGAACCTCCACATGCAG +
Preference number: 3 (lower is better)
Translates to: LAGQFSIFPFVP*SSSQTLNLHMQ
Trigger: CTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAATATGGAAAACTGACCAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp ACCCTGTTGGACTGTTCAAATGTGCAAGGAGCTCACCAGCACAGGCTGCTTCACTCTAGAAACTTCCCATaGTGGAATCTCACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TLLDCSNVQGAHQHRLLHSRNFP*WNLTEE
Trigger: CTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGA...GTGAAGCAGCCTGTGCTGGTGAGCTCCTTGCACATTTGAACAGTCCAACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGGGTTATTCTCAGGGGTaGCTGTGGACATGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: VLVGDGKRILQIVITARRGYSQG*LWTWSF
Trigger: AAAGGACCATGTCCACAGCAACCCCTGAGAATAACC...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp AACTATGGTGGTTATTCTCAGGGGTTGCTGTGGACATaGTCCTTTCTCAAAGGACCAGCACAGGGCTATTTG +
Preference number: 3 (lower is better)
Translates to: NYGGYSQGLLWT*SFLKGPAQGYL
Trigger: CAAATAGCCCTGTGCTGGTCCTTTGAGAAAGGACCATGTCCACAGCAACCCCTGAGAATAACCACCATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCGCTGGCCCACTTGGCTaGAGCTTTCCTTGGAAATCC +
Preference number: 3 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCAGPLG*SFPWKS
Trigger: GGATTTCCAAGGAAAGCTCAAGCCAAGTGGGCCAGC...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp CCTTCAAATCATAGCGATCCACCTGCCTCTGTTTCCTaGGTACTAGGAATAAAGGTGTGCACCACCAACACT +
Preference number: 3 (lower is better)
Translates to: PSNHSDPPASVS*VLGIKVCTTNT
Trigger: AGTGTTGGTGGTGCACACCTTTATTCCTAGTACTCAGGAAACAGAGGCAGGTGGATCGCTATGATTTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp ACCCCCATCACCAGCAGTACCTGTTTCTACTGGGAATaGTCTCATTTCTCTTCTACATCCCTGGCAAGAAGT +
Preference number: 3 (lower is better)
Translates to: TPITSSTCFYWE*SHFSSTSLARS
Trigger: ACTTCTTGCCAGGGATGTAGAAGAGAAATGAGATCATTCCCAGTAGAAACAGGTACTGCTGGTGATGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CCA 72 bp TGTGCACCACCAACACTCAGCAGGGATTTCTCTTACTaGGTACCTTCTCCCATTGCATACTATTTGAACTTC +
Preference number: 3 (lower is better)
Translates to: CAPPTLSRDFSY*VPSPIAYYLNF
Trigger: GAAGTTCAAATAGTATGCAATGGGAGAAGGTACCCAGTAAGAGAAATCCCTGCTGAGTGTTGGTGGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp CAAAGCTTAGGGGCAGGTTCAAATGAGGTAATGAAATaGGACTGCAGCTTTAAAAAGGCTCAAGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: QSLGAGSNEVMK*DCSFKKAQGSL
Trigger: GAGGCTTCCTTGAGCCTTTTTAAAGCTGCAGTCTCATTTCATTACCTCATTTGAACCTGCCCCTAAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp CAAATCACTTCCTGCATTTCAGACCACTGTGAGCTGTaGGCTTCTGCATTGAAAGTCTTTAAGTTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: QITSCISDHCEL*ASALKVFKFPG
Trigger: CCCTGGAAACTTAAAGACTTTCAATGCAGAAGCTCACAGCTCACAGTGGTCTGAAATGCAGGAAGTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp ATTTGGAAAGGCCTCCCTGAGCACAGGACGCACAGATaGAATAAACAACGGAAAGTGACATTTCCATTCAGT +
Preference number: 3 (lower is better)
Translates to: IWKGLPEHRTHR*NKQRKVTFPFS
Trigger: ACTGAATGGAAATGTCACTTTCCGTTGTTTATTTCATCTGTGCGTCCTGTGCTCAGGGAGGCCTTTCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp CTATGCAGTGTAATTAAGTCCTCAGTTACACAGAGCTaGGCAAACTATTTCCCTAGTCAGTGTGCTGCTAGG +
Preference number: 3 (lower is better)
Translates to: LCSVIKSSVTQS*ANYFPSQCAAR
Trigger: CCTAGCAGCACACTGACTAGGGAAATAGTTTGCTCAGCTCTGTGTAACTGAGGACTTAATTACACTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp TGCCCTACAAAAGCTGAGGAGCAACTGGATGAAGAATaGGAACTAAGGACAAACTCGGATGCTAAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: CPTKAEEQLDEE*ELRTNSDAKVR
Trigger: TCTCACTTTAGCATCCGAGTTTGTCCTTAGTTCTCATTCTTCATCCAGTTGCTCCTCAGCTTTTGTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp CAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTaGCTTCCCACCCTGTTGGACTGTTCAAATGTGCAA +
Preference number: 3 (lower is better)
Translates to: QLCLELKRSFYF*LPTLLDCSNVQ
Trigger: TTGCACATTTGAACAGTCCAACAGGGTGGGAAGGCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAAAGGCAAAAGCTGCGTTaGTTTTTCTGTTCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: SRISGESVTVLIAFIIRQRQKLR*FFCSVG
Trigger: CCCCACAGAACAGAAAAACAAACGCAGCTTTTGCCT...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
3UTR TCA 72 bp GCATTTCAGACCACTGTGAGCTGTGAGCTTCTGCATTaGAAGTCTTTAAGTTTCCAGGGTGAGTTTCATTTG +
Preference number: 3 (lower is better)
Translates to: AFQTTVSCELLH*KSLSFQGEFHL
Trigger: CAAATGAAACTCACCCTGGAAACTTAAAGACTTTCAATGCAGAAGCTCACAGCTCACAGTGGTCTGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp CCACACAGATGGCTTCTTATTTTGCTGCAAGTAGCTTaGATTCCAAGATTGTTGAATCCTGTGTTCAAGTGG +
Preference number: 3 (lower is better)
Translates to: PHRWLLILLQVA*IPRLLNPVFKW
Trigger: CCACTTGAACACAGGATTCAACAATCTTGGAATTCAAGCTACTTGCAGCAAAATAAGAAGCCATCTGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp AAATATTACACAGCGGCACACCTTACACTTCCATTATaGGCTCTGTTCACCTCGAATAGTATGTCACACTTG +
Preference number: 3 (lower is better)
Translates to: KYYTAAHLTLPL*ALFTSNSMSHL
Trigger: CAAGTGTGACATACTATTCGAGGTGAACAGAGCTCATAATGGAAGTGTAAGGTGTGCCGCTGTGTAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR-3UTR CAA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCATCTAGAAACTTCCCATaGTGGAATCTCACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSSRNFP*WNLTEE
Trigger: CTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGA...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR GCA 72 bp AATAGTACCCAGAGGAAAGACAGATTGATACATAACTaGAAATATCGCTGTGCACTTGAAGTTGAAGTTGCG +
Preference number: 3 (lower is better)
Translates to: NSTQRKDRLIHN*KYRCALEVEVA
Trigger: CGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTATCAATCTGTCTTTCCTCTGGGTACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CAA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTGGGTTTCTACTGACATaGTCACCTAACTACATCCTT +
Preference number: 3 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVGFLLT*SPNYIL
Trigger: AAGGATGTAGTTAGGTGACAATGTCAGTAGAAACCC...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR-3UTR CAA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTTTGCTGCAAGTAGCTaGAATTCCAAGATTGTTGAA +
Preference number: 3 (lower is better)
Translates to: YITANIAVHLKLKLRLSLFAASS*NSKIVE
Trigger: TTCAACAATCTTGGAATTCAAGCTACTTGCAGCAAA...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR TCA 72 bp ACAAAATTCATACGAGCCCTCCAGAAAGGCAACCAGTaGTTAAAATTCAAACCACAGACTCTTCTAAATAAC +
Preference number: 3 (lower is better)
Translates to: TKFIRALQKGNQ*LKFKPQTLLNN
Trigger: GTTATTTAGAAGAGTCTGTGGTTTGAATTTTAATCACTGGTTGCCTTTCTGGAGGGCTCGTATGAATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR GCA 72 bp TATTCTGGTAATAAATTATTCTGGCTTGACTGGCTATaGATATGGAAGAAAAAGGGCTGTATGTTACATCAG +
Preference number: 3 (lower is better)
Translates to: YSGNKLFWLDWL*IWKKKGCMLHQ
Trigger: CTGATGTAACATACAGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CCA 72 bp GAAAAGGTCTTTCAGAACACAAATTATAGTCCTATTTaGACAAGCCCAGCTCGTTTCTACATGATTTTTACA +
Preference number: 3 (lower is better)
Translates to: EKVFQNTNYSPI*TSPARFYMIFT
Trigger: TGTAAAAATCATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAAGACCTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGTGGGACAGCACTTCCCTCTCCCCGCTGGGCAGAGCAGAAGTCCAGAGACAGCAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWDSTSLSPLGRAEVQRQQGGAE*DQDHGC
Trigger: GCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTG...CTGTCTCTGGACTTCTGCTCTGCCCAGCGGGGAGAGGGAAGTGCTGTCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108709.8
CDS-3UTR GCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSCQKE*QGGAEC
Trigger: GCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGA...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTTCAGGCGGCTCTCAGTaGGCTCAGAGATGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSSGGSQ*AQRWLR
Trigger: CCGGAGCCATCTCTGAGCTCACTGAGAGCCGCCTGA...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTTCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSSEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACATCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RQLASRGPSARHQRLLCTSEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCAGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAQGGAE*DQDHGC
Trigger: GCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLSCQKE*QGGAEC
Trigger: GCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGA...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACCAGTCTCGCCACCCCTaGAGAGGCACTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNQSRHP*RGTSRF
Trigger: AAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTG...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCATGGCTGCCTGCTTTaGCGACTGGACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASHGCLL*RLDSRA
Trigger: AGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATG...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPASEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAGGACCATGGCTGCCTaGTTTGGCGACTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGRTMAA*FGDWTP
Trigger: TGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCT...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGCAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMQGGAE*DQDHGC
Trigger: GCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTG...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPASCQKE*QGGAEC
Trigger: GCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGA...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCAGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
CDS-3UTR CCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTCATGGCTGCCTGCTTTaGCGACTGGACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTHGCLL*RLDSRA
Trigger: AGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATG...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACCATGGCTGCCTGCTTTaGCGACTGGACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESEGLVSARRARVGCTRDHGCLL*RLDSRA
Trigger: AGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATG...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GMDWREGQNSGPPRIQTGAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...CCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMENTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCACTTCCAGGTTTGTTaGGTGTGTCCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGHFQVC*VCPRCW
Trigger: CCAGCAGCGAGGACACACTCAACAAACCTGGAAGTG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGATGGCTCCGGAGGTTaGGGTCTTCTTCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWDGSGG*GLLQSR
Trigger: GCGAGACTGAAGAAGACCTCAACCTCCGGAGCCATC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACGCTCCAGGCTGGGGTTaGTGCCTACACTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADAPGWG*CLHSAR
Trigger: CCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGC...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTTCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLVRSGP*LPALAT
Trigger: AGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCAC...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR CCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACCTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASNTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSNTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CAA 72 bp AAGGTGGAGCCTGTGGCCCCAAGAGGCTACAACAGTTaGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: KVEPVAPRGYNS*RISAAAPSCHP
Trigger: TGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAAACTGTTGTAGCCTCTTGGGGCCACAGGCTCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCACACTTCCAGGTTTGTTaGGTGTGTCCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAHFQVC*VCPRCW
Trigger: CCAGCAGCGAGGACACACTCAACAAACCTGGAAGTG...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR TCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAGATGGCTCCGGAGGTTaGGGTCTTCTTCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQDGSGG*GLLQSR
Trigger: GCGAGACTGAAGAAGACCTCAACCTCCGGAGCCATC...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108709.8
CDS-3UTR TCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCAGATGGCTCCGGAGGTTaGGGTCTTCTTCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPADGSGG*GLLQSR
Trigger: GCGAGACTGAAGAAGACCTCAACCTCCGGAGCCATC...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACTCAGGCGGCTCTCAGTaGGCTCAGAGATGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADSGGSQ*AQRWLR
Trigger: CCGGAGCCATCTCTGAGCTCACTGAGAGCCGCCTGA...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108709.8
CDS-3UTR TCA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: ESEGLVSARRARVGCTRDLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGCAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPLFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLTWNSS*QKECQG
Trigger: TCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCAGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACCATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESEGLVSARRARVGCTRDHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQLASRGPSARHQRLLCTAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGTCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GMDWREGQNSGPPRIQTGSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...CCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGASAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MWLASLRQTGFQSQGGWASALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPCWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTCTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMEVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTCTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCACTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGCTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ESEGLVSARRARVGCTRDETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGACACTTCCAGGTTTGTTaGGTGTGTCCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGHFQVC*VCPRCW
Trigger: CCAGCAGCGAGGACACACTCAACAAACCTGGAAGTG...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR TCA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCCAGTCTCGCCACCCCTaGAGAGGCACTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RRDMESEGLVSARRARVGQSRHP*RGTSRF
Trigger: AAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTG...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATTCAGGCGGCTCTCAGTaGGCTCAGAGATGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHSGGSQ*AQRWLR
Trigger: CCGGAGCCATCTCTGAGCTCACTGAGAGCCGCCTGA...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCACTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGALCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMEAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCCAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVTWNSS*QKECQG
Trigger: TCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPASCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTTCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGATCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNCWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEVRSGP*LPALAT
Trigger: AGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCAC...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSPRGTGWSHSQELQIEPAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...AGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATCTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESEGLVSARRARVGCTRDLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGACTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGAGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFNTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GMDWREGQNSGPPRIQTGSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...CCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAACAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCAGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPAGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: RRDMESEGLVSARRARVGAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGTCGGAGGTAAGGGTCTaGCTTCCGGTCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ASLETSHCGISQKRAWVWSEVRV*LPVLGP
Trigger: AGGGCCGAGGACCGGAAGTCAGACCCTTACCTCCGA...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGLFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KRQLCLSMECWPTWLELSSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGTGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGATATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGCWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVCWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGVRSGP*LPALAT
Trigger: AGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCAC...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WAASLETSHCGISQKRAWAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCACTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPALCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGACTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTTGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RQLASRGPSARHQRLLCTVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGATGGACAGAAATACTCTaGCCAGTTCCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGWTEIL*PVPPEC
Trigger: ACACTCAGGTGGAACTGGCCAGAGTATTTCTGTCCA...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTGGACAGAAATACTCTaGCCAGTTCCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMWTEIL*PVPPEC
Trigger: ACACTCAGGTGGAACTGGCCAGAGTATTTCTGTCCA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGLLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MWLASLRQTGFQSQGGWAETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATCAGTCTCGCCACCCCTaGAGAGGCACTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHQSRHP*RGTSRF
Trigger: AAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTG...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAAACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGATTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLLFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGALFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWLFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGTGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: KRQLCLSMECWPTWLELSSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGASSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCAACACTAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: GWCQHVEHVWAAQGTGNTSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...AGTGTTGCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAATCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCCATGGCTGCCTGCTTTaGCGACTGGACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILHGCLL*RLDSRA
Trigger: AGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATG...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACACACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RQLASRGPSARHQRLLCTHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGCACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAATGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGATACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGCTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMELVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGTGGACAGAAATACTCTaGCCAGTTCCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWWTEIL*PVPPEC
Trigger: ACACTCAGGTGGAACTGGCCAGAGTATTTCTGTCCA...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGALLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGCTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWLLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCGAGACGTCCCTTTGCTaGCTGGCTTCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGETSLC*LASCCC
Trigger: ACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTC...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KRQLCLSMECWPTWLELSVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGCTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCHPSEGWTGGRDRTQVLSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...GAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: RRDMESEGLVSARRARVGSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: MWLASLRQTGFQSQGGWASAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGCAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: GMDWREGQNSGPPRIQTGLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...CCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
CDS-3UTR GCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAGGACCATGGCTGCCTaGTTTGGCGACTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQRTMAA*FGDWTP
Trigger: TGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCT...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTAGGACCATGGCTGCCTaGTTTGGCGACTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVRTMAA*FGDWTP
Trigger: TGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCT...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSQGGAE*DQDHGC
Trigger: GCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCACATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IPFCTLELFPDPEPPHAAHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: KRQLCLSMECWPTWLELSVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCATCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IPFCTLELFPDPEPPHAASCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGATGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WAASLETSHCGISQKRAWSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCTTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGATGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGCPFSC*NSPCVA
Trigger: AGCAACACAGGGACTATTCCAACAACTAAACGGACA...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATCACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCAAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPARHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGTACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATTACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACCCTCCAGGGCCAGGGCGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: EVRQYPTLQVSSTLQGQGVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...GCCCTGGCCCTGGAGGGTAGAGGATACCTGGAGGGTAGGATACTGTCTTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGACAGAAATACTCTaGCCAGTTCCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPWTEIL*PVPPEC
Trigger: ACACTCAGGTGGAACTGGCCAGAGTATTTCTGTCCA...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFLLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RSPRGTGWSHSQELQIEPSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...AGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATCAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACCCTCCAGGGCCAGGGCTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: EVRQYPTLQVSSTLQGQGLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...GCCCTGGCCCTGGAGGGTAGAGGATACCTGGAGGGTAGGATACTGTCTTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSCQKE*QGGAEC
Trigger: GCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCCTCTCAGGGTCTCTTTTGCCAGACTAGTACCAAATCCCCAGGCTCAGCTGACATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PSQGLFCQTSTKSPGSADISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...GTCAGCTGAGCCTGGGGATTTGGTACTAGTCTGGCAAAAGAGACCCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: KRQLCLSMECWPTWLELSSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGIVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGECWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp ATTCCCTTTTGTACCCTGGAGCTCTTCCCAGACCCTGAACCTCCACATGCAGCACTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: IPFCTLELFPDPEPPHAALTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...TGCTGCATGTGGAGGTTCAGGGTCTGGGAAGAGCTCCAGGGTACAAAAGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCCTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAAATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAACTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TQRVRSGAASLETPHWEQLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGTGGACAGAAATACTCTaGCCAGTTCCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEWTEIL*PVPPEC
Trigger: ACACTCAGGTGGAACTGGCCAGAGTATTTCTGTCCA...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCCTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRDMESEGLVSARRARVGLLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARNTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVNTELA*LQTPGG
Trigger: TCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTT...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CAA 72 bp CTCCAGATAGTCATTACTGCTAGAAGGCCGATTGCTTaGGGACAGCCCCACTCCCTCTCAGGGTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LQIVITARRPIA*GQPHSLSGSLL
Trigger: CAAAAGAGACCCTGAGAGGGAGTGGGGCTGTCCCAAAGCAATCGGCCTTCTAGCAGTAATGACTATCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCAGTCTCGCCACCCCTaGAGAGGCACTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALQSRHP*RGTSRF
Trigger: AAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCACACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GLATLESHRRGPGIGDPAHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ASLETSHCGISQKRAWVWLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: WAASLETSHCGISQKRAWTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGELAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGAAGGGTACCATTTCCCAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQLGIFHQQWKLKKGTISQGGAE*DQDHGC
Trigger: GCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTG...GGAAATGGTACCCTTCTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHTWNSS*QKECQG
Trigger: TCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTTCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGTGACCCACCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSVTHLL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGGTGGGTCAC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCATGGCTGCCTGCTTTaGCGACTGGACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSHGCLL*RLDSRA
Trigger: AGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: ASLETSHCGISQKRAWVWLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGTGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGTACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: WKRQLCLSMECWPTWLELLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGCACTCAGGGGGCTTCTaGGAGTCTTGTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARHSGGF*ESCGQK
Trigger: TTTCTGTCCACAAGACTCCCAGAAGCCCCCTGAGTG...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGATGGCTCCGGAGGTTaGGGTCTTCTTCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSDGSGG*GLLQSR
Trigger: GCGAGACTGAAGAAGACCTCAACCTCCGGAGCCATC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCAGGCGGCTCTCAGTaGGCTCAGAGATGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSGGSQ*AQRWLR
Trigger: CCGGAGCCATCTCTGAGCTCACTGAGAGCCGCCTGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RRDMESEGLVSARRARVGAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVAREHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCATTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TACTCAGGGTGTCCCAGAACTCCAACCTCAATCAGAGGGCTAGATGTCCAGGGCTCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: YSGCPRTPTSIRGLDVQGSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...GCCCTGGACATCTAGCCCTCTGATTGAGGTTGGAGTTCTGGGACACCCTGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATTATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: ASLETSHCGISQKRAWVWLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVLMPTL*AASNAN
Trigger: GTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAA...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCACCATGGAGCTGCTGTaGCCCTGTATGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSTMELL*PCMSPS
Trigger: GCTGGGAGACATACAGGGGCACAGCAGCTCCATGGT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCAGAGACCATGGAGCTaGTGTGCCCCTGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALQRPWS*CAPVCL
Trigger: GAGACATACAGGGGCACAGCAGCTCCATGGTCTCTG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGTGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGECPFSC*NSPCVA
Trigger: AGCAACACAGGGACTATTCCAACAACTAAACGGACA...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp CACAGGAGACGTGCCGTAGGTTTTTGCCTGATGGGTTTGCTGAGTCAGATACAGGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: HRRRAVGFCLMGLLSQIQVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...CTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGGTTCAATTCCTGGTATaGGATGTGGGCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQVQFLV*DVGRQV
Trigger: TACCTGCCTGCCCACATCCCATACCAGGAATTGAAC...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
3UTR CAA 72 bp TTAACTTCTCAAGGTCTTGCATTCTGCAGGTCTCTCTaGTGCTTAGCTGAGGGCAGAGGGGAAACACACGGC +
Preference number: 4 (lower is better)
Translates to: LTSQGLAFCRSL*CLAEGRGETHG
Trigger: GCCGTGTGTTTCCCCTCTGCCCTCAGCTAAGCACAAGAGAGACCTGCAGAATGCAAGACCTTGAGAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
3UTR CAA 72 bp TTGGCAGGACATGGCTTTCTCTCTCCCAGCCATGGCTaGAATTCTGGATGCCCTACAAAAGCTGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LAGHGFLSPSHG*NSGCPTKAEEQ
Trigger: TTGCTCCTCAGCTTTTGTAGGGCATCCAGAATTCAAGCCATGGCTGGGAGAGAGAAAGCCATGTCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGILCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VLVGDGKRILQIVITARRLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKVWLFL*PTCCAP
Trigger: AGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACAC...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARLFFQH*ACLASD
Trigger: GTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAG...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSAVSS*TICCWS
Trigger: AGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQCWLAS*CCMLNV
Trigger: GACATTCAACATACAGCAGCATGAAGCCAGCCAGCA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGCTGGAGGGACCACGTaGCACAGACCTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKAGGTT*HRPLSG
Trigger: TCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGCTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTCTGCACTTGGGTCTaGAGCATTGGCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLCTWV*SIGILS
Trigger: ACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ACEEWAASLETSHCGISQSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGITGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLVGDGKRILQIVITARRTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAGGACCATGGCTGCCTaGTTTGGCGACTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKRTMAA*FGDWTP
Trigger: TGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALTWNSS*QKECQG
Trigger: TCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTCTGCCCTCTCTCGGTaGTGGTGGAAGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKSALSR*WWKEVS
Trigger: GGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGTCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: ASLETSHCGISQKRAWVWSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGAAGGGTACCATTTCCAACTTGACGGCGCGATaGTGCTCCACCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQLGIFHQQWKLKKGTISNLTAR*CSTWSS
Trigger: GGAAGACCAGGTGGAGCAGCATCGCGCCGTCAAGTT...GGAAATGGTACCCTTCTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKVRSGP*LPALAT
Trigger: AGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCAC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CAA 72 bp GTCAGGCAGACAGATCTCCATGAATTTGAGGAGAGCTaGGTCTACATAGTGAGTTCTAGACCAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRQTDLHEFEES*VYIVSSRPVRA
Trigger: AGCCCTGACTGGTCTAGAACTCACTATGTAGACCAAGCTCTCCTCAAATTCATGGAGATCTGTCTGCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACACTTCCAGGTTTGTTaGGTGTGTCCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKHFQVC*VCPRCW
Trigger: CCAGCAGCGAGGACACACTCAACAAACCTGGAAGTG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCACGGGGTGTCTGCAGTaGTATGCTCAAAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSTGCLQ*YAQNLR
Trigger: CCTCAGATTTTGAGCATATCACTGCAGACACCCCGT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCTGCAGTGCTGTGCTaGTTCTCCTCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSAVLC*FSSIFC
Trigger: ACAGAAGATGGAGGAGAATCAGCACAGCACTGCAGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVSCQKE*QGGAEC
Trigger: GCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGA...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSTWNSS*QKECQG
Trigger: TCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSVGYRC*AAAVTS
Trigger: ACTGGTGACAGCAGCTGCCCAACATCTATAACCCAC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTCTCTCGGTGCTGGTaGAAGGAGGTCTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLSRCW*KEVSRM
Trigger: CATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTGCCCTCTCTCGGTGCTaGTGGAAGGAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAALSRC*WKEVSR
Trigger: TCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGC...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCAAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSRTFPP*ALGSSF
Trigger: GAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCT...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CACAGGAGACGTGCCGTAGGTTTTTGCCTGATGGGTTTGCTGAGTCAGATACAGATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: HRRRAVGFCLMGLLSQIQMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...CTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLVGDGKRILQIVITARRVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGTCTGTAAGTCTGCCTaGAATCGCCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALVCKSA*NRLHSS
Trigger: AGAAGAATGGAGGCGATTCCAGGCAGACTTACAGAC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGCACTTCCAGGTTTGTTaGGTGTGTCCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKHFQVC*VCPRCW
Trigger: CCAGCAGCGAGGACACACTCAACAAACCTGGAAGTG...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTCAGTCTCGCCACCCCTaGAGAGGCACTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: YITANIAVHLKLKLRLSLQSRHP*RGTSRF
Trigger: AAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTG...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAATCAGGCGGCTCTCAGTaGGCTCAGAGATGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKSGGSQ*AQRWLR
Trigger: CCGGAGCCATCTCTGAGCTCACTGAGAGCCGCCTGA...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCAGCAAGCTCTTTCTaGAAGGTCTTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSASSF*KVLFFS
Trigger: GGAGAAGAACAAGACCTTTCAGAAAGAGCTTGCTGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGAGGACCATGGCTGCCTaGTTTGGCGACTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMRTMAA*FGDWTP
Trigger: TGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCT...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGCATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAACATTGGCATCCTCAGTaGTCAGGGCCCACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SRISGESVTVLIAFIIRQHWHPQ*SGPTSL
Trigger: AAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATG...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAAGCTGAGACGTCCCTTTaGTGGCTGGCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKAETSL*WLASCC
Trigger: GCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGC...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTGTGCATCACTTTCTaGGGATGCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLCITF*GCCSLC
Trigger: GCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLTCIV*GAPSRG
Trigger: TCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTCTGCTGTCACCAGTGTaGCTTGCTGCCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRALLSPV*LAAPSE
Trigger: TTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCAG...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp AGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGAAGGGTACCATTTCCACAGAGAGGCTTTGGTaGCATCACTGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: SQLGIFHQQWKLKKGTISTERLW*HHCLKT
Trigger: GGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGT...GGAAATGGTACCCTTCTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTGCTGAGCCTCACACTTaGTGTCGTTGGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAAEPHT*CRWPLP
Trigger: TGGTAGTGGCCAACGACATCAAGTGTGAGGCTCAGC...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAGVVLR*LVGVGL
Trigger: CAATCCCACTCCTACCAAGCATCTGAGGACCACCCC...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTCCTGCAGAGTAGCCTaGAGCTCTTCTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: YITANIAVHLKLKLRLSLSCRVA*SSSAVL
Trigger: CAGCACTGCAGAAGAGCTGCAGGCTACTCTGCAGGA...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp GGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTGCTAGGTTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: GSSYSDSPDWRVRHAVARFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...CCTAGCAACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp GCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: AASLETSHCGISQKRAWVFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...AACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CCA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVVRSGP*LPALAT
Trigger: AGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCAC...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCACTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSLTSLS*RDHVAQ
Trigger: CTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAG...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp GTGCTCGTGGGAGATGGGAAGAGAATACTCCAGATAGTCATTACTGCTAGAAGGATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: VLVGDGKRILQIVITARRMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...CCTTCTAGCAGTAATGACTATCTGGAGTATTCTCTTCCCATCTCCCACGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCGATGCTGCTCCACCTaGTCTTCCAATTCAAATATG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSRCCST*SSNSNM
Trigger: CATATTTGAATTGGAAGACCAGGTGGAGCAGCATCG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
3UTR CAA 72 bp CACAGGAGACGTGCCGTAGGTTTTTGCCTGATGGGTTaGCTGAGTCAGATACAGGTCTTCACATACATATAT +
Preference number: 4 (lower is better)
Translates to: HRRRAVGFCLMG*LSQIQVFTYIY
Trigger: ATATATGTATGTGAAGACCTGTATCTGACTCAGCAAACCCATCAGGCAAAAACCTACGGCACGTCTCCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
3UTR CAA 72 bp GTTCTGGAGAACTGTGAGAATCTGCAGACTCCATCTTaGCTAGGTTCCAGTTATTCTGACTCACCTGATTGG +
Preference number: 4 (lower is better)
Translates to: VLENCENLQTPS*LGSSYSDSPDW
Trigger: CCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAAAGATGGAGTCTGCAGATTCTCACAGTTCTCCAGAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGATGGCTCCGGAGGTTaGGGTCTTCTTCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKDGSGG*GLLQSR
Trigger: GCGAGACTGAAGAAGACCTCAACCTCCGGAGCCATC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKAAAEC*AASLFQ
Trigger: TTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTCAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAQVSCC*MLSSFS
Trigger: AGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTG...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR TCA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAAGGTTATTGTGTAACTTaGCGGCGCGATGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKGYCVT*RRDAAP
Trigger: TGGAGCAGCATCGCGCCGTCAAGTTACACAATAACC...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGTGTCTGCAGTGATATaGTCAAAATCTGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKVSAVI*SKSEAS
Trigger: GGACGCCTCAGATTTTGAGCATATCACTGCAGACAC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AATTCCAAGATTGTTGAATCCTGTGTTCAAGTGGGCAGCATAAAAGTAAACACCGCAGCTCTTCTGCAGTaGTGTGCTGATTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSKIVESCVQVGSIKVNTAALLQ*CADSPP
Trigger: TGGAGGAGAATCAGCACAGCACTGCAGAAGAGCTGC...GGTGTTTACTTTTATGCTGCCCACTTGAACACAGGATTCAACAATCTTGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGAGCCTGCAGCTCTTCTaGAGTGCTGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMSLQLF*SAVLIL
Trigger: GAGAATCAGCACAGCACTGCAGAAGAGCTGCAGGCT...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATGGTCTGATAATTCCTaGAGAGTAGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKWSDNS*RVACSS
Trigger: AGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAAATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SRISGESVTVLIAFIIRQISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTAAGTTCTCTGCTGTCTaGCCCACAGTACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVKFSAV*PTVLLA
Trigger: GGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTT...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATTAGCAATTCTTGTCTaGGCTCTGTGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLAILV*ALCKTA
Trigger: AGCTGTCTTGCACAGAGCTCAGACAAGAATTGCTAA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTATCACTTTCTGGGGATaGTGTTCCCTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAITFWG*CSLCTW
Trigger: CCAAGTGCAGAGGGAACAGCATCCCCAGAAAGTGAT...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: YITANIAVHLKLKLRLSLISVHF*SSSRTF
Trigger: GAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATAT...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCATCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSSREYP*TSAPAQ
Trigger: TTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGA...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAATATGTTGAATGTCTCTaGATCGGAGAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRISGESVTVLIAFIIRQYVECL*IGETAA
Trigger: CGCTGCTGTCTCTCCGATGCAGAGACATTCAACATA...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACACTGTCTTTGGTTTTaGCTTCTGCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKHCLWF*LLPEVL
Trigger: GAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATACTGCTGGCCTCTATaGCTTTTTGCTTATCAGCCT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKYCWPL*LFAYQP
Trigger: AGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp TCTCATTTCTCTTCTACATCCCTGGCAAGAAGTGTAGTAATCAGGAGAAAGTCACTTCTGGGAGTCTTGTaGACAGAAATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHFSSTSLARSVVIRRKSLLGVL*TEILWP
Trigger: TGGCCAGAGTATTTCTGTCCACAAGACTCCCAGAAG...TGACTTTCTCCTGATTACTACACTTCTTGCCAGGGATGTAGAAGAGAAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR GCA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMSSCTI*CWSDNS
Trigger: GGAATTATCAGACCAGCAGCAGATGGTGCAGGAACT...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAATCTGCTCAGCTGTTCTaGTTGATGATCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRISGESVTVLIAFIIRQSAQLF*LMITDF
Trigger: GAAGTCTGTGATCATCAAGCAGAACAGCTGAGCAGA...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKCPFSC*NSPCVA
Trigger: AGCAACACAGGGACTATTCCAACAACTAAACGGACA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTTGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVINYSGLTGYAYGRKRACTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAATGCACCATCTGCTGCTaGTCTGATAATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKCTICC*SDNSCR
Trigger: TCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCA...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKMSIAP*FSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACAT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAATCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKSVSSP*EMPRTA
Trigger: AGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGA...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKEHSLL*TFMLLL
Trigger: AAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAATCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKSCTIC*WSDNSC
Trigger: GCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGA...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKCPFSC*NSPCVA
Trigger: AGCAACACAGGGACTATTCCAACAACTAAACGGACA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCTGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCCPFSC*NSPCVA
Trigger: AGCAACACAGGGACTATTCCAACAACTAAACGGACA...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR CCA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTAGGCACTCCCATGTGTaGTTCTTCTGTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVRHSHV*FFCTHL
Trigger: CAGATGAGTACAGAAGAACCACACATGGGAGTGCCT...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CCA 90 bp AGCAGGATATCAGGGGAAAGTGTGACTGTTCTCATAGCTTTTATCATTAGGCAACTTGTAATTTTAGGCTaGTTCTGCTCAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SRISGESVTVLIAFIIRQLVILG*FCSAVL
Trigger: CAGAACAGCTGAGCAGAACCAGCCTAAAATTACAAG...TTGCCTAATGATAAAAGCTATGAGAACAGTCACACTTTCCCCTGATATCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR TCA 90 bp AATTCCAAGATTGTTGAATCCTGTGTTCAAGTGGGCAGCATAAAAGTAAACACCCACTTCGAAGCCTGTTaGTTTCACTGTCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NSKIVESCVQVGSIKVNTHFEAC*FHCLWF
Trigger: AAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTG...GGTGTTTACTTTTATGCTGCCCACTTGAACACAGGATTCAACAATCTTGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: REREKKERERERTEFSEKFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR TCA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVAPVKG*SASHFP
Trigger: AGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGC...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR GCA 90 bp CATCAAGAAGAACCAAGTCAGTTAGGCATTTTCCATCAGCAATGGAAGCTAAAGTTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCG +
Preference number: 4 (lower is better)
Translates to: HQEEPSQLGIFHQQWKLKFSSFR*LIMSIA
Trigger: CGCTATAGACATGATTAAGCACCTGAAGGAAGAAAA...CTTTAGCTTCCATTGCTGATGGAAAATGCCTAACTGACTTGGTTCTTCTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS GCA 90 bp CAGAAGGAGTGCCAGGGAGGGGCCGAGTGCGATCAGGACCATGGCTaGCTGCTTTGGCGACTGGACTCCAGGGCTTGGCGGCACTCCGCA +
Preference number: 5 (lower is better)
Translates to: QKECQGGAECDQDHG*LLWRLDSRAWRHSA
Trigger: TGCGGAGTGCCGCCAAGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 90 bp ATGCCAGAAGGAGTGCCAGGGAGGGGCCGAGTGCGATCAGGACCATaGCTGCCTGCTTTGGCGACTGGACTCCAGGGCTTGGCGGCACTC +
Preference number: 5 (lower is better)
Translates to: MPEGVPGRGRVRSGP*LPALATGLQGLAAL
Trigger: GAGTGCCGCCAAGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAASSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMESSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: PHGGAWKRQLCLSMECWPELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...GGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS TCA 90 bp CATACTCCCGGGCCAGGGCTGCCAGAGGGTCTCTTCTTTCAACACTaGGCTTGCTTGGCTTCAGACCCCCGGTGGACGCACTCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: HTPGPGLPEGLFFQH*ACLASDPRWTHSAV
Trigger: GACTGCTGAGTGCGTCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAGACCCTCTGGCAGCCCTGGCCCGGGAGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp ACTTGGAACTCTTCATGCCAGAAGGAGTGCCAGGGAGGGGCCGAGTaGGATCAGGACCATGGCTGCCTGCTTTGGCGACTGGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: TWNSSCQKECQGGAE*DQDHGCLLWRLDSR
Trigger: CCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCGGAATAGTCCCTGTGTaGCTCCTCAGGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGGIVPV*LLRRLS
Trigger: TGAGAGCCGCCTGAGGAGCAACACAGGGACTATTCC...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAADSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMEFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: KRQLCLSMECWPTWLELSSSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVALPGL*SVSSLL
Trigger: CAGCAGCGAGGACACACTCAACAAACCTGGAAGTGC...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMEWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGCCAGCAGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DWREGQNSGPPRIQTGPAALPGL*SVSSLL
Trigger: CAGCAGCGAGGACACACTCAACAAACCTGGAAGTGC...TGCTGGCCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR CAA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAGATGGCTCCGGAGGTaGAGGTCTTCTTCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGRWLRR*RSSSVS
Trigger: CGAGACTGAAGAAGACCTCAACCTCCGGAGCCATCT...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCACTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GLLNIGSRHVASGPHGGALGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGACTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: CLWSAWWGMEEAALPLDGLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...TCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: ASGPHGGAWKRQLCLSMEGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...CTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: PLVRMVGHGRGSSASRWSDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...ACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LWSAWWGMEEAALPLDGVWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...CACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAATTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TQRVRSGAASLETPHWEQFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS GCA 90 bp AAGCCAGTGAGGTTGAAGACTTGGAACTCTTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGCGATCAGGACCATGGCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: KPVRLKTWNSSCQKE*QGGAECDQDHGCLL
Trigger: AAGCAGGCAGCCATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp GCCGAGACTCGAAAGCCAGTGAGGTTGAAGACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGAGGGGCCGAGTGCGATCAGGACCAT +
Preference number: 5 (lower is better)
Translates to: AETRKPVRLKTWNSS*QKECQGGAECDQDH
Trigger: ATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCGAGTCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp CCGGCAGATCCAAGCGCTGAGACGTCCCTTTGCTGGCTGGCTTCATaGTGCTGTATGTTGAATGTCTCTGCATCGGAGAGACAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PADPSAETSLCWLAS*CCMLNVSASERQQR
Trigger: CCGCTGCTGTCTCTCCGATGCAGAGACATTCAACATACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGCGCTTGGATCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp CAGGAGTGCGTTACGCTTAGAGCCACCATACTCCCGGGCCAGGGCTaGCAGAGGGTCTCTTCTTTCAACACTGAGCTTGCTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: QECVTLRATILPGQG*QRVSSFNTELAWLQ
Trigger: CTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAGACCCTCTGGCAGCCCTGGCCCGGGAGTATGGTGGCTCTAAGCGTAACGCACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCGGAATAGTCCCTGTGTaGCTCCTCAGGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: MWLASLRQTGFQSQGGWAGIVPV*LLRRLS
Trigger: TGAGAGCCGCCTGAGGAGCAACACAGGGACTATTCC...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108709.8
CDS-3UTR CAA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGAATAGTCCCTGTGTaGCTCCTCAGGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGGIVPV*LLRRLS
Trigger: TGAGAGCCGCCTGAGGAGCAACACAGGGACTATTCC...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCCCAATGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: GWPVLGKLDSNHREAGPQWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...TTGGGGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: KRQLCLSMECWPTWLELSWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: WKRQLCLSMECWPTWLELLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTGTGGGACAGCACTTCCCTCTCCCCGCTGGGCAGAGCAGAAGTCCAGAGACAGCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: VWDSTSLSPLGRAEVQRQLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...CTGTCTCTGGACTTCTGCTCTGCCCAGCGGGGAGAGGGAAGTGCTGTCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp GTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: VASGPHGGAWKRQLCLSMGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...CATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: GMLPLVRMVGHGRGSSASGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...AGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTCACAGAAGAGGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: LTEEGLGLGTQRVRSGAAHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...GGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCCTCTTCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGCTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: WWGMEEAALPLDGVLAHLLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...CAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RQLASRGPSARHQRLLCTVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCTGCCTCTCGATGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: CCLWSAWWGMEEAALPLDGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...ATCGAGAGGCAGAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS TCA 90 bp GCTGGAGGGACCACGTGGCACAGACCTCTCTCTGGAGATAGTTACTaGGAGCTCCCGTGGAGCTGGAATGCCTGTCCGTTTAGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: AGGTTWHRPLSGDSY*ELPWSWNACPFSCW
Trigger: CCAACAACTAAACGGACAGGCATTCCAGCTCCACGGGAGCTCTCAGTAACTATCTCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp GCAGATCCAAGCGCTGAGACGTCCCTTTGCTGGCTGGCTTCATGCTaGTGTATGTTGAATGTCTCTGCATCGGAGAGACAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: ADPSAETSLCWLASC*CMLNVSASERQQRQ
Trigger: CTGCCGCTGCTGTCTCTCCGATGCAGAGACATTCAACATACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGCGCTTGGATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLSEVED*ELFMPE
Trigger: TTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACT...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTGGCCGAAAGCCAGTGAGGTaGAAGACTTGGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: VKGWCQHVEHVWAAQGTGRKPVR*KTWNSS
Trigger: TGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG...GCCAGTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCAGATGGCTCCGGAGGTaGAGGTCTTCTTCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGRWLRR*RSSSVS
Trigger: CGAGACTGAAGAAGACCTCAACCTCCGGAGCCATCT...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: WKRQLCLSMECWPTWLELLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAACTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: TQRVRSGAASLETPHWEQLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTTGGCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: GSSASRWSAGPLGLSFPWLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...CCAAGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CGCCAGCTGGCCTCCCGTGGACCATCAGCAAGGCACCAAAGGCTCCTTTGCACAGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: RQLASRGPSARHQRLLCTGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...TGTGCAAAGGAGCCTTTGGTGCCTTGCTGATGGTCCACGGGAGGCCAGCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp ACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCCCCACTGGGAGCAACTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: TQRVRSGAASLETPHWEQLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...TTGCTCCCAGTGGGGAGTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: WKRQLCLSMECWPTWLELSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCAGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GLLNIGSRHVASGPHGGAVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...TGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCAGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: GLATLESHRRGPGIGDPAGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCATGGAAGAGGCAGCTCCAGCTGCTGCTGAAATaGGTGATATCAATGTTCGCA +
Preference number: 5 (lower is better)
Translates to: GSRHVASGPHGGAWKRQLQLLLK*VISMFA
Trigger: TGCGAACATTGATATCACCAATTTCAGCAGCAGCTG...GAGCTGCCTCTTCCATGCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACCAGCTGCTGCTGAAATaGGTGATATCAATGTTCGCA +
Preference number: 5 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNQLLLK*VISMFA
Trigger: TGCGAACATTGATATCACCAATTTCAGCAGCAGCTG...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGCCTCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGAGATGGCTCCGGAGGTaGAGGTCTTCTTCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: CLSRNSPLGARVAEHRLQRWLRR*RSSSVS
Trigger: CGAGACTGAAGAAGACCTCAACCTCCGGAGCCATCT...CTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGCCTGGGTTTGGGGACCCAGCGTGTGAGGAGTGGGGCTGCCTCTCTAGAAACTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GPGFGDPACEEWGCLSRNSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...GTTTCTAGAGAGGCAGCCCCACTCCTCACACGCTGGGTCCCCAAACCCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTGCCACCCATCAGAGGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: LPPIRGMDWREGQNSGPPGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...TGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCCTCTGATGGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCCTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: KRQLCLSMECWPTWLELSLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCACTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: GLATLESHRRGPGIGDPALMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KRQLCLSMECWPTWLELSVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...GGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS GCA 90 bp GCACCTTCATGCTCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTGCAGGAAGAAGTTGGGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: APSCSCLGFAGVVLR*LVGVGLQEEVGLEP
Trigger: AGGCTCCAGCCCAACTTCTTCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp CTCGAGCACAGCCTTCTCTGCACCTTCATGCTCTTGCTTAGGTTTTaGAGGGGTGGTCCTCAGATGCTTGGTAGGAGTGGGATTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LEHSLLCTFMLLLRF*RGGPQMLGRSGIAG
Trigger: TCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGGATGGACTGGAGGGAGGGACAGAACTCAGGTCCTCCAAGGATACAGACCGGGAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GMDWREGQNSGPPRIQTGSEVED*ELFMPE
Trigger: TTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACT...CCCGGTCTGTATCCTTGGAGGACCTGAGTTCTGTCCCTCCCTCCAGTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
CDS-3UTR CAA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGSEVED*ELFMPE
Trigger: TTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACT...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTCGAAAGCCAGTGAGGTaGAAGACTTGGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: WKRQLCLSMECWPTWLELRKPVR*KTWNSS
Trigger: TGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ATGTGGCTGGCCAGTCTTAGGCAAACTGGATTCCAATCACAGGGAGGCTGGGCCGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: MWLASLRQTGFQSQGGWAGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...GGCCCAGCCTCCCTGTGATTGGAATCCAGTTTGCCTAAGACTGGCCAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: WAASLETSHCGISQKRAWELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTCCTGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: RGSSASRWSAGPLGLSFPGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...AGGAAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTGGGGCGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: RVAEHRLQACCLWSAWWGAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...GCCCCACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS GCA 90 bp AGTTCTCGTACCTGGGACTCGAGCACAGCCTTCTCTGCACCTTCATaGTCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGATGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SSRTWDSSTAFSAPS*SCLGFAGVVLRCLV
Trigger: TACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAGTCCCAGGTACGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp TCCACTAGCTTCTCGTTCTCGGCTGTCAGTTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGCAGAGTAGCCTGCAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: STSFSFSAVSSCTIC*WSDNSCRVACSSSA
Trigger: TGCAGAAGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGAGAACGAGAAGCTAGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 90 bp AGAATATCCGTGCACTTCTGCTCCAGCTCAAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTCTTCACTCGCTCCTGTAAAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RISVHFCSSSRTFPP*ALGSSFFTRSCKRL
Trigger: CAACCTTTTACAGGAGCGAGTGAAGAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGTTGCCTCTGGTCCGCATGGTCGAAAGCCAGTGAGGTaGAAGACTTGGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: EQGLLNIGSRHVASGPHGRKPVR*KTWNSS
Trigger: TGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG...ACCATGCGGACCAGAGGCAACATGCCTGGAGCCTATGTTCAGCAACCCTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASLETSHCGISQKRAWVWALPGL*SVSSLL
Trigger: CAGCAGCGAGGACACACTCAACAAACCTGGAAGTGC...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTGAGAATCAGCGCTGCTGCACCCAGCTGCCACCCATCAGAGGGATGGACTGGATCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRISAAAPSCHPSEGWTGSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...TCCAGTCCATCCCTCTGATGGGTGGCAGCTGGGTGCAGCAGCGCTGATTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: ESEGLVSARRARVGCTRDLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: WRVKGWCQHVEHVWAAQGSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...CCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTGCACAAGGGACTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: ESEGLVSARRARVGCTRDSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...GTCCCTTGTGCAGCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACCCTGTTGGACTGTTCAAATGTGCAAGGAGCTCACCAGCACAGGCTGCTTCACGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: TLLDCSNVQGAHQHRLLHDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...GTGAAGCAGCCTGTGCTGGTGAGCTCCTTGCACATTTGAACAGTCCAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: WAASLETSHCGISQKRAWDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCAGCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: GNPGGEVVGIAGVMDGEQHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...CTGCTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: WKRQLCLSMECWPTWLELAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...AAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGTGACTTTACTGTGGTaGCAGAGTCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGVTLLW*QSLKEL
Trigger: CAGCTCCTTCAGACTCTGCAACCACAGTAAAGTCAC...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS TCA 90 bp CTGCAGTGCTGTGCTGATTCTCCTCCATCTTCTGTATCTTCTCCGTaGGAGATGCCAAGGACAGCTCACTTGCATTGTTTGGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LQCCADSPPSSVSSP*EMPRTAHLHCLGSS
Trigger: GGAGCTCCCCAAACAATGCAAGTGAGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGAAGATGGAGGAGAATCAGCACAGCACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp GCTGTGCTGATTCTCCTCCATCTTCTGTATCTTCTCCGTGAGAGATaGCAAGGACAGCTCACTTGCATTGTTTGGGGAGCTCCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: AVLILLHLLYLLRER*QGQLTCIVWGAPSR
Trigger: CCTACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTCCTTGGCATCTCTCACGGAGAAGATACAGAAGATGGAGGAGAATCAGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp TCATCCACTAGCTTCTCGTTCTCGGCTGTCAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCCTGCAGAGTAGCCTGCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSTSFSFSAVSSCTI*CWSDNSCRVACSSS
Trigger: AGAAGAGCTGCAGGCTACTCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGAGAACGAGAAGCTAGTGGATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp ATGGTCTTCTCATCCACTAGCTTCTCGTTCTCGGCTGTCAGTTCCTaGACCATCTGCTGCTGGTCTGATAATTCCTGCAGAGTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: MVFSSTSFSFSAVSS*TICCWSDNSCRVAC
Trigger: GCAGGCTACTCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGAGAACGAGAAGCTAGTGGATGAGAAGACCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 90 bp TATCTTCTCCGTGAGAGATGCCAAGGACAGCTCACTTGCATTGTTTaGGGAGCTCCCAGTAGGGGAGCCCTTGGAGCTCTTAAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: YLLRERCQGQLTCIV*GAPSRGALGALKRV
Trigger: AACCCTTTTAAGAGCTCCAAGGGCTCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTCCTTGGCATCTCTCACGGAGAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: GLATLESHRRGPGIGDPALISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...TGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GGAAGAGGCAGCTCTGCCTCTCGATGGAGTGCTGGCCCACTTGGCTTGAGCTTTTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: GRGSSASRWSAGPLGLSFLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...AAAGCTCAAGCCAAGTGGGCCAGCACTCCATCGAGAGGCAGAGCTGCCTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTGAGCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: LGNPGGEVVGIAGVMDGEHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...CTCACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACTGGCAACACTGGAATCTCACAGAAGAGGGCCTGGGATTGGGGACCCAGCATGCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: TGNTGISQKRAWDWGPSMHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...CATGCTGGGTCCCCAATCCCAGGCCCTCTTCTGTGAGATTCCAGTGTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp ACCCTGTTGGACTGTTCAAATGTGCAAGGAGCTCACCAGCACAGGCTGCTTCACCTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: TLLDCSNVQGAHQHRLLHLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...GTGAAGCAGCCTGTGCTGGTGAGCTCCTTGCACATTTGAACAGTCCAACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AGAAGAGACATGGAGAGTGAAGGGCTGGTGTCAGCACGTAGAGCACGTGTGGGCCAGCTGCTGCTGAAATaGGTGATATCAATGTTCGCA +
Preference number: 5 (lower is better)
Translates to: RRDMESEGLVSARRARVGQLLLK*VISMFA
Trigger: TGCGAACATTGATATCACCAATTTCAGCAGCAGCTG...GCCCACACGTGCTCTACGTGCTGACACCAGCCCTTCACTCTCCATGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS TCA 90 bp CCTGGGCACTGGGTTCCTCATTCTTCACTCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCTGACTCAGCTGTTCTGCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PGHWVPHSSLAPVKG*SASHFPDSAVLPSL
Trigger: GAGAGAGGGCAGAACAGCTGAGTCAGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGCGAGTGAAGAATGAGGAACCCAGTGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 90 bp CTTCCTCAACCTTCCGTAGGCTACAGGTCAGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAAAGCGGCTCTTCTCGAGAATATCCG +
Preference number: 5 (lower is better)
Translates to: LPQPSVGYRSAAAEC*AASLFQSGSSREYP
Trigger: CGGATATTCTCGAGAAGAGCCGCTTTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTGTAGCCTACGGAAGGTTGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGGAATAGTCCCTGTGTaGCTCCTCAGGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSGIVPV*LLRRLS
Trigger: TGAGAGCCGCCTGAGGAGCAACACAGGGACTATTCC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TTGCTAGGTTCCAGTTATTCTGACTCACCTGATTGGAGGGTCAGGCATGCAGTTTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: LLGSSYSDSPDWRVRHAVWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...AACTGCATGCCTGACCCTCCAATCAGGTGAGTCAGAATAACTGGAACCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AGGAGTCCCAGGGGAACTGGATGGAGCCACAGCCAAGAACTACAGATAGAGCCTCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: RSPRGTGWSHSQELQIEPHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...AGGCTCTATCTGTAGTTCTTGGCTGTGGCTCCATCCAGTTCCCCTGGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp TCTCTAGAAACTCCCCACTGGGAGCAAGGGTTGCTGAACATAGGCTCCAGGCATGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: SLETPHWEQGLLNIGSRHGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...ATGCCTGGAGCCTATGTTCAGCAACCCTTGCTCCCAGTGGGGAGTTTCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TTCCTTGGAAATCCAGGTGGTGAGGTGGTGGGCATAGCAGGTGTGATGGACGGTCAGCTGCTGCTGAAATaGGTGATATCAATGTTCGCA +
Preference number: 5 (lower is better)
Translates to: FLGNPGGEVVGIAGVMDGQLLLK*VISMFA
Trigger: TGCGAACATTGATATCACCAATTTCAGCAGCAGCTG...ACCGTCCATCACACCTGCTATGCCCACCACCTCACCACCTGGATTTCCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS TCA 90 bp TGGTTTTCTTCCTCAACCTTCCGTAGGCTACAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCTCTTTCAAAGCGGCTCTTCTCGAGA +
Preference number: 5 (lower is better)
Translates to: WFSSSTFRRLQVSCC*MLSSFSLSKRLFSR
Trigger: TCTCGAGAAGAGCCGCTTTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTGTAGCCTACGGAAGGTTGAGGAAGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 90 bp TTCACTTCGAAGCCTGTTGATTTCACTGTCTTTGGTTTTGGCTTCTaGCAGAAGTTCTCGTACCTGGGACTCGAGCACAGCCTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FTSKPVDFTVFGFGF*QKFSYLGLEHSLLC
Trigger: GCAGAGAAGGCTGTGCTCGAGTCCCAGGTACGAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSALPGL*SVSSLL
Trigger: CAGCAGCGAGGACACACTCAACAAACCTGGAAGTGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: WAASLETSHCGISQKRAWAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS CCA 90 bp ATTTCACTGTCTTTGGTTTTGGCTTCTGCCAGAAGTTCTCGTACCTaGGACTCGAGCACAGCCTTCTCTGCACCTTCATGCTCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: ISLSLVLASARSSRT*DSSTAFSAPSCSCL
Trigger: TAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAGTCCCAGGTACGAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: ACEEWAASLETSHCGISQSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: WAASLETSHCGISQKRAWLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...CCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TTTCCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: FPPVPLQRGKTVSYPPGILPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...GATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAAAGCTCCAGGCTGGGGTaGATGCCTACACTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKSSRLG*MPTLCA
Trigger: CGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCT...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAGATGGCTCCGGAGGTaGAGGTCTTCTTCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKRWLRR*RSSSVS
Trigger: CGAGACTGAAGAAGACCTCAACCTCCGGAGCCATCT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTG +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKWSLTS*SWRDHV
Trigger: CACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp GCATGTGAGGAGTGGGCTGCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: ACEEWAASLETSHCGISQLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...CTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGCAGCCCACTCCTCACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCCCCAGTTCCCTTACAAAGAGGTAAGACAGTATCCTACCCTCCAGGTATCCTCTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: PPVPLQRGKTVSYPPGILSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...GAGGATACCTGGAGGGTAGGATACTGTCTTACCTCTTTGTAAGGGAACTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TTGGGGCAGGTAGTTGCTAAGGACAGAGTTTTGACTGAAGCAAGGCCAGAGCAGTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LGQVVAKDRVLTEARPEQSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...CTGCTCTGGCCTTGCTTCAGTCAAAACTCTGTCCTTAGCAACTACCTGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp GCCTCTCTAGAAACTTCCCATTGTGGAATCTCACAGAAGAGGGCCTGGGTTTGGTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: ASLETSHCGISQKRAWVWSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...CCAAACCCAGGCCCTCTTCTGTGAGATTCCACAATGGGAAGTTTCTAGAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKLGSEA*ASSVLR
Trigger: CCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLPLLN*VTAQGK
Trigger: CTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS CCA 90 bp TTCTCATTTTCTTCCTTCAGGTGCTTAATCATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTCCGTAGGCTACAGGTCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FSFSSFRCLIMSIAP*FSSSTFRRLQVSCC
Trigger: GCAGCAGCTGACCTGTAGCCTACGGAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATGATTAAGCACCTGAAGGAAGAAAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCACACTTGATGTCGTaGGCCACTACCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKSHLMS*ATTTAV
Trigger: GACTGCAGTGGTAGTGGCCAACGACATCAAGTGTGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CCCTTTCATATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: PFHIEMAVVSNHGKGWALSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...GAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATATGAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AATTCCAAGATTGTTGAATCCTGTGTTCAAGTGGGCAGCATAAAAGTAAACACCGAGCTCTTAAAAGGGTaGCTAGTGGCTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: NSKIVESCVQVGSIKVNTELLKG*LVADRG
Trigger: GCCCCTGTCAGCCACTAGCAACCCTTTTAAGAGCTC...GGTGTTTACTTTTATGCTGCCCACTTGAACACAGGATTCAACAATCTTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTTTCTGCTCCTCCAGCTaGATCACACTGCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LVINYSGLTGYAYGRKRAFCSSS*ITLPSS
Trigger: GCTGGAAGGCAGTGTGATCAAGCTGGAGGAGCAGAA...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACGAAAGCCAGTGAGGTaGAAGACTTGGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKRKPVR*KTWNSS
Trigger: TGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVALPGL*SVSSLL
Trigger: CAGCAGCGAGGACACACTCAACAAACCTGGAAGTGC...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TCCAGGGTGAGTTTCATTTGTGAGGCTTTTGTTGTAAGTTGTTCTTCATTAGTTAGATGGCTCCGGAGGTaGAGGTCTTCTTCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: SRVSFICEAFVVSCSSLVRWLRR*RSSSVS
Trigger: CGAGACTGAAGAAGACCTCAACCTCCGGAGCCATCT...AACTAATGAAGAACAACTTACAACAAAAGCCTCACAAATGAAACTCACCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGGAATAGTCCCTGTGTaGCTCCTCAGGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKGIVPV*LLRRLS
Trigger: TGAGAGCCGCCTGAGGAGCAACACAGGGACTATTCC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TATAGAAATGGCAGTAGTTTCCAATCATGGCAAGGGCTGGGCTCTCTTTCTTCCTCACTTCGAAGCCTGTaGATTTCACTGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YRNGSSFQSWQGLGSLSSSLRSL*ISLSLV
Trigger: AACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGA...GGAAGAAAGAGAGCCCAGCCCTTGCCATGATTGGAAACTACTGCCATTTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGCTGTTCCCTCTGCACTaGGGTCTGAAGCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMLFPLH*GLKHWH
Trigger: ATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAG...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AATTCCAAGATTGTTGAATCCTGTGTTCAAGTGGGCAGCATAAAAGTAAACACCTGGTTATTGTGTAACTaGACGGCGCGATGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NSKIVESCVQVGSIKVNTWLLCN*TARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCA...GGTGTTTACTTTTATGCTGCCCACTTGAACACAGGATTCAACAATCTTGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp GCAAATGTAAAAGGTCCAACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAAGGGCTTCTGGGAGTCTaGTGGACAGAAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: ANVKGPTSAKNQLCLELKGLLGV*WTEILW
Trigger: CCAGAGTATTTCTGTCCACAAGACTCCCAGAAGCCC...TTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGTTGGACCTTTTACATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKSEVED*ELFMPE
Trigger: TTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACT...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049836.14
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATCACTGTCTTTGGTTTaGGCTTCTGCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKSLSLV*ASARSS
Trigger: AGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAACATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAAGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTCTGATGAGCTGGTTATaGTGTAACTTGACGGCGCGA +
Preference number: 5 (lower is better)
Translates to: YITANIAVHLKLKLRLSLLMSWL*CNLTAR
Trigger: TCGCGCCGTCAAGTTACACAATAACCAGCTCATCAG...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS GCA 90 bp TCATGTTCTAGGAACCCATTCAGCTTCTCATTTTCTTCCTTCAGGTaGTTAATCATGTCTATAGCGCCTTGGTTTTCTTCCTCAACCTTC +
Preference number: 5 (lower is better)
Translates to: SCSRNPFSFSFSSFR*LIMSIAPWFSSSTF
Trigger: GAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATGATTAAGCACCTGAAGGAAGAAAATGAGAAGCTGAATGGGTTCCTAGAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS-3UTR CAA 90 bp CTGGTAATAAATTATTCTGGCTTGACTGGCTATGCATATGGAAGAAAAAGGGCTCGAAAGCCAGTGAGGTaGAAGACTTGGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVINYSGLTGYAYGRKRARKPVR*KTWNSS
Trigger: TGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG...AGCCCTTTTTCTTCCATATGCATAGCCAGTCAAGCCAGAATAATTTATTACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp AGAGAGAGAGAGAAGAAAGAGAGAGAGAGAGAGCGCACTGAATTTTCTGAGAAATTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: REREKKERERERTEFSEKLISLS*VLASAR
Trigger: TCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAA...TTTCTCAGAAAATTCAGTGCGCTCTCTCTCTCTCTCTTTCTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049836.14
ENSMUST00000201723.4
ENSMUST00000202178.4
CDS-3UTR CAA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGACAGCTCACTTGCATaGTTTGGGGAGCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKDSSLA*FGELPV
Trigger: TACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TTTCAGAACACAAATTATAGTCCTATTTGGACAAGCCCAGCTCGTTTCTACATGGGCCTCTATGGCTTTTaGCTTATCAGCCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: FQNTNYSPIWTSPARFYMGLYGF*LISLQK
Trigger: CTTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCC...CATGTAGAAACGAGCTGGGCTTGTCCAAATAGGACTATAATTTGTGTTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp ACAAGTGCTAAGAACCAACTCTGTCTGGAACTAAAACGCAGTTTCTATTTCTGCCAGCTGCTGCTGAAATaGGTGATATCAATGTTCGCA +
Preference number: 5 (lower is better)
Translates to: TSAKNQLCLELKRSFYFCQLLLK*VISMFA
Trigger: TGCGAACATTGATATCACCAATTTCAGCAGCAGCTG...GCAGAAATAGAAACTGCGTTTTAGTTCCAGACAGAGTTGGTTCTTAGCACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000202179.2
CDS-3UTR CAA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKGDREA*VTSLLE
Trigger: TTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp TACATAACTGCAAATATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTCATGTCTATAGCGCCTaGGTTTTCTTCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: YITANIAVHLKLKLRLSLHVYSA*VFFLNL
Trigger: AAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATG...AAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGATATTTGCAGTTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKSEVED*ELFMPE
Trigger: TTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACT...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS-3UTR CAA 90 bp ATCGCTGTGCACTTGAAGTTGAAGTTGCGTCTTTCTCTTTGTTTATATATCAAAGCTCAGCTGTTCTGCTaGATGATCACAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: IAVHLKLKLRLSLCLYIKAQLFC*MITDFF
Trigger: AAAGAAGTCTGTGATCATCAAGCAGAACAGCTGAGC...TTTGATATATAAACAAAGAGAAAGACGCAACTTCAACTTCAAGTGCACAGCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049836.14
CDS CAA 72 bp AGGGGCCGAGTGCGATCAGGACCATGGCTGCCTGCTTaGGCGACTGGACTCCAGGGCTTGGCGGCACTCCGC +
Preference number: 6 (lower is better)
Translates to: RGRVRSGPWLPA*ATGLQGLAALR
Trigger: GCGGAGTGCCGCCAAGCCCTGGAGTCCAGTCGCCAAAGCAGGCAGCCATGGTCCTGATCGCACTCGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp AGGGCTGCCAGAGGGTCTCTTCTTTCAACACTGAGCTaGCTTGGCTTCAGACCCCCGGTGGACGCACTCAGC +
Preference number: 6 (lower is better)
Translates to: RAARGSLLSTLS*LGFRPPVDALS
Trigger: GCTGAGTGCGTCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAGACCCTCTGGCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AGGTTGAAGACTTGGAACTCTTCATGCCAGAAGGAGTaGCAGGGAGGGGCCGAGTGCGATCAGGACCATGGC +
Preference number: 6 (lower is better)
Translates to: RLKTWNSSCQKE*QGGAECDQDHG
Trigger: GCCATGGTCCTGATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGTCTTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp GGGATGCTGTTCCCTCTGCACTTGGGTCTGAAGCATTaGCATCCTCAGTGCTCAGGGCCCACCTCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: GMLFPLHLGLKH*HPQCSGPTSLC
Trigger: GCAAAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp GTGCACTTCTGCTCCAGCTCAAGGACCTTCCCTCCCTaGGCACTGGGTTCCTCATTCTTCACTCGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: VHFCSSSRTFPP*ALGSSFFTRSC
Trigger: ACAGGAGCGAGTGAAGAATGAGGAACCCAGTGCCCAGGGAGGGAAGGTCCTTGAGCTGGAGCAGAAGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp CTCCCGTGGAGCTGGAATGCCTGTCCGTTTAGTTGTTaGAATAGTCCCTGTCTCGGGCTCCTCCAGCTTCGC +
Preference number: 6 (lower is better)
Translates to: LPWSWNACPFSC*NSPCLGLLQLR
Trigger: GCGAAGCTGGAGGAGCCCGAGACAGGGACTATTCCAACAACTAAACGGACAGGCATTCCAGCTCCACGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092415.9
ENSMUST00000201723.4
ENSMUST00000202179.2
CDS CAA 72 bp GGGGATGCTGTTCCCTCTGCACTTGGGTCTGAAGCATaGGCATCCTCAGTGCTCAGGGCCCACCTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: GDAVPSALGSEA*ASSVLRAHLSL
Trigger: CAAAGAGAGGTGGGCCCTGAGCACTGAGGATGCCAATGCTTCAGACCCAAGTGCAGAGGGAACAGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp GTCTTCTTCAGTCTCGCCACCCCTGAAGAGGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTGGCCCTCTTGAGCTTACTCAGCCGA +
Preference number: 6 (lower is better)
Translates to: VFFSLATPEEALPGL*SVSSLLALLSLLSR
Trigger: TCGGCTGAGTAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTGAAGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp GAGGTCTTCTTCAGTCTCGCCACCCCTGAAGAGGCACTTCCAGGTTaGTTGAGTGTGTCCTCGCTGCTGGCCCTCTTGAGCTTACTCAGC +
Preference number: 6 (lower is better)
Translates to: EVFFSLATPEEALPG*LSVSSLLALLSLLS
Trigger: GCTGAGTAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACTGAAGAAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp CGAAAGCCAGTGAGGTTGAAGACTTGGAACTCTTCATaGCAGAAGGAGTGCCAGGGAGGGGCCGAGTGCGAT +
Preference number: 6 (lower is better)
Translates to: RKPVRLKTWNSS*QKECQGGAECD
Trigger: ATCGCACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TCAAAGCGGCTCTTCTCGAGAATATCCGTGCACTTCTaGTCCAGCTCAAGGACCTTCCCTCCCTGGGCACTG +
Preference number: 6 (lower is better)
Translates to: SKRLFSRISVHF*SSSRTFPPWAL
Trigger: CAGTGCCCAGGGAGGGAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGAAGAGCCGCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp CTCCCGTGGAGCTGGAATGCCTGTCCGTTTAGTTGTTaGAATAGTCCCTGTGTTGCTCCTCAGGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LPWSWNACPFSC*NSPCVAPQAAL
Trigger: GAGAGCCGCCTGAGGAGCAACACAGGGACTATTCCAACAACTAAACGGACAGGCATTCCAGCTCCACGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp CCCTCTCTCGGTGCTGGTGGAAGGAGGTCTCCAGAATaGTCTTCTCATCCACTAGCTTCTCGTTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: PSLGAGGRRSPE*SSHPLASRSRL
Trigger: CAGCCGAGAACGAGAAGCTAGTGGATGAGAAGACCATTCTGGAGACCTCCTTCCACCAGCACCGAGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp TGCCAGAGGGTCTCTTCTTTCAACACTGAGCTTGCTTaGCTTCAGACCCCCGGTGGACGCACTCAGCAGTCT +
Preference number: 6 (lower is better)
Translates to: CQRVSSFNTELA*LQTPGGRTQQS
Trigger: AGACTGCTGAGTGCGTCCACCGGGGGTCTGAAGCCAAGCAAGCTCAGTGTTGAAAGAAGAGACCCTCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp CCAGGTTTGTTGAGTGTGTCCTCGCTGCTGGCCCTCTaGAGCTTACTCAGCCGAGACTCGAAAGCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: PGLLSVSSLLAL*SLLSRDSKASE
Trigger: CTCACTGGCTTTCGAGTCTCGGCTGAGTAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp AGTCTCGCCACCCCTGAAGAGGCACTTCCAGGTTTGTaGAGTGTGTCCTCGCTGCTGGCCCTCTTGAGCTTA +
Preference number: 6 (lower is better)
Translates to: SLATPEEALPGL*SVSSLLALLSL
Trigger: TAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACCTGGAAGTGCCTCTTCAGGGGTGGCGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp TTGAGCTTACTCAGCCGAGACTCGAAAGCCAGTGAGGTTGAAGACTaGGAACTCTTCATGCCAGAAGGAGTGCCAGGGAGGGGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: LSLLSRDSKASEVED*ELFMPEGVPGRGRV
Trigger: CACTCGGCCCCTCCCTGGCACTCCTTCTGGCATGAAGAGTTCCAAGTCTTCAACCTCACTGGCTTTCGAGTCTCGGCTGAGTAAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp GAGGCACTTCCAGGTTTGTTGAGTGTGTCCTCGCTGCTGGCCCTCTaGAGCTTACTCAGCCGAGACTCGAAAGCCAGTGAGGTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: EALPGLLSVSSLLAL*SLLSRDSKASEVED
Trigger: GTCTTCAACCTCACTGGCTTTCGAGTCTCGGCTGAGTAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACCTGGAAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049836.14
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000202178.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 72 bp ACCACGTGGCACAGACCTCTCTCTGGAGATAGTTACTaGGAGCTCCCGTGGAGCTGGAATGCCTGTCCGTTT +
Preference number: 6 (lower is better)
Translates to: TTWHRPLSGDSY*ELPWSWNACPF
Trigger: AAACGGACAGGCATTCCAGCTCCACGGGAGCTCTCAGTAACTATCTCCAGAGAGAGGTCTGTGCCACGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 72 bp GCTCTTCATTCACAGGTAGAAGTGTGGCTCTTCCTGTaGCCCACCTGCTGTGCCCCTGTATGTCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: ALHSQVEVWLFL*PTCCAPVCLPA
Trigger: AGCTGGGAGACATACAGGGGCACAGCAGGTGGGTCACAGGAAGAGCCACACTTCTACCTGTGAATGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp ACCTGGGACTCGAGCACAGCCTTCTCTGCACCTTCATaGTCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: TWDSSTAFSAPS*SCLGFAGVVLR
Trigger: TCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAGTCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp AGGAAGAAGTTGGGCTGGAGCCTAACTTCTTTGAGCTaGAGGGACCACGTGGCACAGACCTCTCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RKKLGWSLTSLS*RDHVAQTSLWR
Trigger: TCTCCAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCAGCCCAACTTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp TGGGCTTCCAAAACTGGACTCGTGGGTTATAGATGTTaGGCAGCTGCTGTCACCAGTGTGACTTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: WASKTGLVGYRC*AAAVTSVTCCP
Trigger: GGGGCAGCAAGTCACACTGGTGACAGCAGCTGCCCAACATCTATAACCCACGAGTCCAGTTTTGGAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp GATTGCAGGAAGAAGTTGGGCTGGAGCCTAACTTCTTaGAGCTGGAGGGACCACGTGGCACAGACCTCTCTC +
Preference number: 6 (lower is better)
Translates to: DCRKKLGWSLTS*SWRDHVAQTSL
Trigger: GAGAGAGGTCTGTGCCACGTGGTCCCTCCAGCTCAAAGAAGTTAGGCTCCAGCCCAACTTCTTCCTGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp ACGTCCCTTTGCTGGCTGGCTTCATGCTGCTGTATGTaGAATGTCTCTGCATCGGAGAGACAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: TSLCWLASCCCM*NVSASERQQRQ
Trigger: CTGCCGCTGCTGTCTCTCCGATGCAGAGACATTCAACATACAGCAGCATGAAGCCAGCCAGCAAAGGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AGCCTTCTCTGCACCTTCATGCTCTTGCTTAGGTTTTaGAGGGGTGGTCCTCAGATGCTTGGTAGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SLLCTFMLLLRF*RGGPQMLGRSG
Trigger: CCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TATCTTCTCCGTGAGAGATGCCAAGGACAGCTCACTTaGATTGTTTGGGGAGCTCCCAGTAGGGGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: YLLRERCQGQLT*IVWGAPSRGAL
Trigger: AAGGGCTCCCCTACTGGGAGCTCCCCAAACAATGCAAGTGAGCTGTCCTTGGCATCTCTCACGGAGAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TTCTCGTTCTCGGCTGTCAGTTCCTGCACCATCTGCTaGTGGTCTGATAATTCCTGCAGAGTAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FSFSAVSSCTIC*WSDNSCRVACS
Trigger: GCTGCAGGCTACTCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGAGAACGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AGCTTCTCGTTCTCGGCTGTCAGTTCCTGCACCATCTaGTGCTGGTCTGATAATTCCTGCAGAGTAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SFSFSAVSSCTI*CWSDNSCRVAC
Trigger: GCAGGCTACTCTGCAGGAATTATCAGACCAGCAGCAGATGGTGCAGGAACTGACAGCCGAGAACGAGAAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp GTTGATCAGCTTCTCATTTTCCTGACTCAGCTGTTCTaGCCTCTCTCGGTGCTGGTGGAAGGAGGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: VDQLLIFLTQLF*PLSVLVEGGLQ
Trigger: CTGGAGACCTCCTTCCACCAGCACCGAGAGAGGGCAGAACAGCTGAGTCAGGAAAATGAGAAGCTGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AGCGCTGAGACGTCCCTTTGCTGGCTGGCTTCATGCTaGTGTATGTTGAATGTCTCTGCATCGGAGAGACAG +
Preference number: 6 (lower is better)
Translates to: SAETSLCWLASC*CMLNVSASERQ
Trigger: CTGTCTCTCCGATGCAGAGACATTCAACATACAGCAGCATGAAGCCAGCCAGCAAAGGGACGTCTCAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp GGACTCGAGCACAGCCTTCTCTGCACCTTCATGCTCTaGCTTAGGTTTTGCAGGGGTGGTCCTCAGATGCTT +
Preference number: 6 (lower is better)
Translates to: GLEHSLLCTFML*LRFCRGGPQML
Trigger: AAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp CCTTCATGCTCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGATGCTaGGTAGGAGTGGGATTGCAGGAAGAAGTTGGGCTGGAGCCTAAC +
Preference number: 6 (lower is better)
Translates to: PSCSCLGFAGVVLRC*VGVGLQEEVGLEPN
Trigger: GTTAGGCTCCAGCCCAACTTCTTCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp GCAGTGATATGCTCAAAATCTGAGGCGTCCGGTGACAGAGAGGCTTaGGTGACATCACTGCTTGAAGACCCTGATGTCCGCAAGGCACTC +
Preference number: 6 (lower is better)
Translates to: AVICSKSEASGDREA*VTSLLEDPDVRKAL
Trigger: GAGTGCCTTGCGGACATCAGGGTCTTCAAGCAGTGATGTCACCAAAGCCTCTCTGTCACCGGACGCCTCAGATTTTGAGCATATCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 72 bp CCTTCCGTAGGCTACAGGTCAGCTGCTGCTGAATGTTaGGCAGCTTCTCTCTTTCAAAGCGGCTCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: PSVGYRSAAAEC*AASLFQSGSSR
Trigger: TCGAGAAGAGCCGCTTTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTGTAGCCTACGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 72 bp TCCTCAACCTTCCGTAGGCTACAGGTCAGCTGCTGCTaGATGTTGAGCAGCTTCTCTCTTTCAAAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SSTFRRLQVSCC*MLSSFSLSKRL
Trigger: GAGCCGCTTTGAAAGAGAGAAGCTGCTCAACATTCAGCAGCAGCTGACCTGTAGCCTACGGAAGGTTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TGCTCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGATaGTTGGTAGGAGTGGGATTGCAGGAAGAAGTTGGG +
Preference number: 6 (lower is better)
Translates to: CSCLGFAGVVLR*LVGVGLQEEVG
Trigger: CCCAACTTCTTCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AAGTTCTCGTACCTGGGACTCGAGCACAGCCTTCTCTaGACCTTCATGCTCTTGCTTAGGTTTTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: KFSYLGLEHSLL*TFMLLLRFCRG
Trigger: ACCCCTGCAAAACCTAAGCAAGAGCATGAAGGTGCAGAGAAGGCTGTGCTCGAGTCCCAGGTACGAGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TCTCTCTTTCAAAGCGGCTCTTCTCGAGAATATCCGTaGACTTCTGCTCCAGCTCAAGGACCTTCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: SLFQSGSSREYP*TSAPAQGPSLP
Trigger: AGGGAGGGAAGGTCCTTGAGCTGGAGCAGAAGTGCACGGATATTCTCGAGAAGAGCCGCTTTGAAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp GAACCTCGAAGTTCTCTGCTGTCTGCCCCACAGTACTaGTGGCCTCTATGGCTTTTTGCTTATCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: EPRSSLLSAPQY*WPLWLFAYQPP
Trigger: TGGAGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTTCGAGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp TCACTGAGCTCCAGGCTGGGGTTGATGCCTACACTCTaGGCGGCTTCAAATGCCAACAGGAGATTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: SLSSRLGLMPTL*AASNANRRFLF
Trigger: AAAAAGGAATCTCCTGTTGGCATTTGAAGCCGCGCAGAGTGTAGGCATCAACCCCAGCCTGGAGCTCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp AGCTTGATCACACTGCCTTCCAGCTCACTGATGAGCTaGTTATTGTGTAACTTGACGGCGCGATGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLITLPSSSLMS*LLCNLTARCCS
Trigger: GGAGCAGCATCGCGCCGTCAAGTTACACAATAACCAGCTCATCAGTGAGCTGGAAGGCAGTGTGATCAAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201015.4
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202744.4
ENSMUST00000202905.4
CDS CAA 72 bp TCTTGCTTAGGTTTTGCAGGGGTGGTCCTCAGATGCTaGGTAGGAGTGGGATTGCAGGAAGAAGTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: SCLGFAGVVLRC*VGVGLQEEVGL
Trigger: CAGCCCAACTTCTTCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp TTAGGTTTTGCAGGGGTGGTCCTCAGATGCTTGGTAGGAGTGGGATaGCAGGAAGAAGTTGGGCTGGAGCCTAACTTCTTTGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LGFAGVVLRCLVGVG*QEEVGLEPNFFELE
Trigger: CTCCAGCTCAAAGAAGTTAGGCTCCAGCCCAACTTCTTCCTGCAATCCCACTCCTACCAAGCATCTGAGGACCACCCCTGCAAAACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp CCTCGAAGTTCTCTGCTGTCTGCCCCACAGTACTGCTaGCCTCTATGGCTTTTTGCTTATCAGCCTCCAAAA +
Preference number: 6 (lower is better)
Translates to: PRSSLLSAPQYC*PLWLFAYQPPK
Trigger: TTTTGGAGGCTGATAAGCAAAAAGCCATAGAGGCCAGCAGTACTGTGGGGCAGACAGCAGAGAACTTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp AAGCCTGTTGATTTCACTGTCTTTGGTTTTGGCTTCTaGCAGAAGTTCTCGTACCTGGGACTCGAGCACAGC +
Preference number: 6 (lower is better)
Translates to: KPVDFTVFGFGF*QKFSYLGLEHS
Trigger: GCTGTGCTCGAGTCCCAGGTACGAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAACAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS GCA 72 bp CTTGTTCTTCTCCTCCAGGGTTCTTATCAAAGGCTGTaGATCACTTTCTGGGGATGCTGTTCCCTCTGCACT +
Preference number: 6 (lower is better)
Translates to: LVLLLQGSYQRL*ITFWGCCSLCT
Trigger: AGTGCAGAGGGAACAGCATCCCCAGAAAGTGATGCACAGCCTTTGATAAGAACCCTGGAGGAGAAGAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp AACTCATTTCCAACTGGGCTTCCAAAACTGGACTCGTaGGTTATAGATGTTGGGCAGCTGCTGTCACCAGTG +
Preference number: 6 (lower is better)
Translates to: NSFPTGLPKLDS*VIDVGQLLSPV
Trigger: CACTGGTGACAGCAGCTGCCCAACATCTATAACCCACGAGTCCAGTTTTGGAAGCCCAGTTGGAAATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp TGCTGTCACCAGTGTGACTTGCTGCCCCTTCTGAATTaGGTGACTGCTCAAGGTAAGTCAGTTTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: CCHQCDLLPLLN*VTAQGKSVSPS
Trigger: TGAAGGAGAAACTGACTTACCTTGAGCAGTCACCAAATTCAGAAGGGGCAGCAAGTCACACTGGTGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CCA 72 bp TCTTCCTTCAGGTGCTTAATCATGTCTATAGCGCCTTaGTTTTCTTCCTCAACCTTCCGTAGGCTACAGGTC +
Preference number: 6 (lower is better)
Translates to: SSFRCLIMSIAP*FSSSTFRRLQV
Trigger: GACCTGTAGCCTACGGAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATGATTAAGCACCTGAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS TCA 72 bp TGGGTTCCTCATTCTTCACTCGCTCCTGTAAAAGGTTaGTCAGCTTCTCATTTTCCTGACTCAGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: WVPHSSLAPVKG*SASHFPDSAVL
Trigger: CAGAACAGCTGAGTCAGGAAAATGAGAAGCTGATCAACCTTTTACAGGAGCGAGTGAAGAATGAGGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 90 bp TCCATTTTCAAGCCTTCCAAGGTAACTCGACATTCCTCCAGAGTTTaGGCCATCACACTATTATTACACCGCTCATGTTCTAGGAACCCA +
Preference number: 6 (lower is better)
Translates to: SIFKPSKVTRHSSRV*AITLLLHRSCSRNP
Trigger: TGGGTTCCTAGAACATGAGCGGTGTAATAATAGTGTGATGGCCAAAACTCTGGAGGAATGTCGAGTTACCTTGGAAGGCTTGAAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp TTTAGTTCACTTCGAAGCCTGTTGATTTCACTGTCTTaGGTTTTGGCTTCTGCCAGAAGTTCTCGTACCTGG +
Preference number: 6 (lower is better)
Translates to: FSSLRSLLISLS*VLASARSSRTW
Trigger: CCAGGTACGAGAACTTCTGGCAGAAGCCAAAACCAAAGACAGTGAAATCAACAGGCTTCGAAGTGAACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4
CDS CAA 72 bp AAGCCTTCCAAGGTAACTCGACATTCCTCCAGAGTTTaGGCCATCACACTATTATTACACCGCTCATGTTCT +
Preference number: 6 (lower is better)
Translates to: KPSKVTRHSSRV*AITLLLHRSCS
Trigger: AGAACATGAGCGGTGTAATAATAGTGTGATGGCCAAAACTCTGGAGGAATGTCGAGTTACCTTGGAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049836.14
ENSMUST00000092415.9
ENSMUST00000108709.8
ENSMUST00000201364.4
ENSMUST00000201624.4
ENSMUST00000201671.4
ENSMUST00000201723.4
ENSMUST00000202178.4
ENSMUST00000202179.2
ENSMUST00000202389.4
ENSMUST00000202905.4