Pregenerated sensors for SPDL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069910Ensembl transcript IDs: ENSMUST00000093191.3
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCATTCTCTTCTGATCTGGTCTGTTCCCTGTGACCCACAGTTCTaGGAAGGATCATCAGTTAAGGACTTATGGGTCAGAATCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: SHSLLIWSVPCDPQF*EGSSVKDLWVRITA Trigger: GGCTGTGATTCTGACCCATAAGTCCTTAACTGATGATCCTTCTCAGAACTGTGGGTCACAGGGAACAGACCAGATCAGAAGAGAATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR TCA 90 bp | CCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTaGTCTGGTCTGTTCCCTGTGACCCACAGTTCTGAGAAGGATCAT | + |
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Preference number: 1 (lower is better) Translates to: PHPTQQVGLNSPILF*SGLFPVTHSSEKDH Trigger: ATGATCCTTCTCAGAACTGTGGGTCACAGGGAACAGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR-3UTR TCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTGCCAGGCTTCAGCACTaGCCTATGCAAAGCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: TSNTASRFKFSHSLLIWSARLQH*PMQSST Trigger: TGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTGGC...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTGGTCTGTTCCCTGTaGCCCACAGTTCTGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLVCSL*PTVLRR Trigger: CCTTCTCAGAACTGTGGGTCACAGGGAACAGACCAG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTTCAGCACTGACCTATaGAAAGCTCCACAAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PCSNSTSNTASRFKFSHSFSTDL*KAPQGC Trigger: ACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR TCA 72 bp | TGGTCACAGCGGTGCGAGCACGCCAGGCTTCAGCACTaGCCTATGCAAAGCTCCACAAGGGTGTCCCACGCA | + |
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Preference number: 3 (lower is better) Translates to: WSQRCEHARLQH*PMQSSTRVSHA Trigger: TGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTGGCGTGCTCGCACCGCTGTGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR GCA 72 bp | AGCGGTGCGAGCACGCCAGGCTTCAGCACTGACCTATaGAAAGCTCCACAAGGGTGTCCCACGCATAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SGASTPGFSTDL*KAPQGCPTHRS Trigger: GCTCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTGGCGTGCTCGCACCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR CCA 72 bp | ACTTATGGGTCAGAATCACAGCCACATCGGAAGTCTTaGTCACAGCGGTGCGAGCACGCCAGGCTTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TYGSESQPHRKS*SQRCEHARLQH Trigger: GTGCTGAAGCCTGGCGTGCTCGCACCGCTGTGACCAAGACTTCCGATGTGGCTGTGATTCTGACCCATAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| 3UTR TCA 72 bp | ACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTaGTCTGGTCTGTTCCCTGTGACCCACAGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TQQVGLNSPILF*SGLFPVTHSSE Trigger: CTCAGAACTGTGGGTCACAGGGAACAGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAGGCTGGCTGCACACATaGAGAGGCTGGCTGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGGWLHT*RGWLFP Trigger: TGGAAACAGCCAGCCTCTTCATGTGTGCAGCCAGCC...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAAGATGCAGGTTCTTATaGGGAGAGAGGCTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGRCRFL*GERLAG Trigger: GCCAGCCAGCCTCTCTCCTCATAAGAACCTGCATCT...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACCGAAGACATGCTACTaGGCACTCTCTGCTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGPKTCY*ALSAQT Trigger: TGTCTGAGCAGAGAGTGCTCAGTAGCATGTCTTCGG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGATGTTCAAACTCAGTCTaGGAGCCCCTCATCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGCSNSV*EPLILS Trigger: GCTGAGGATGAGGGGCTCGCAGACTGAGTTTGAACA...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACCTTCATCCTCTGGATaGACAGCTCGTCCTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGPSSSG*TARPLC Trigger: GCACAAAGGACGAGCTGTCCATCCAGAGGATGAAGG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGATATGAGGAGAGAGGCTaGCTGGCTGCACACATGAAG | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGYEERG*LAAHMK Trigger: CTTCATGTGTGCAGCCAGCCAGCCTCTCTCCTCATA...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACCTCGCGCCTCCTTTTaGGTACAGGTACTTCAATTC | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGPRASF*VQVLQF Trigger: GAATTGAAGTACCTGTACTCAAAAGGAGGCGCGAGG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAAAACTCCATCCTCAGTaGCACTGGCAGCAGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGKLHPQ*HWQQLF Trigger: AAACAGCTGCTGCCAGTGCCACTGAGGATGGAGTTT...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACTAACATCCGACTCTTaGGCTCCACTTCTCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGLTSDS*APLLFE Trigger: TTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACATGTTTTCACTTTCTaGGAGCTGCAGGTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGHVFTF*ELQVSF Trigger: GAAAGACACCTGCAGCTCTCAGAAAGTGAAAACATG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCGCCGCCTGCTGGAGTaGGTGACCCAGCTGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSRRLLE*VTQLYL Trigger: CAGGTACAGCTGGGTCACGCACTCCAGCAGGCGGCG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGACGTCTTCACACTCTTTaGGTTTGTTCCGAAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGRLHTL*VCSEDL Trigger: CAAATCTTCGGAACAAACTCAAAGAGTGTGAAGACG...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAGATCTGAGTAATAGGTaGTGTCTTCTAGCACACAAG | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGDLSNR*CLLAHK Trigger: CTTGTGTGCTAGAAGACAGCACCTATTACTCAGATC...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTAGCTGCACCTCTAGCTaGTCCAGCTGCGCCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSSCTSS*SSCAFC Trigger: GCAGAAGGCGCAGCTGGAGCAGCTAGAGGTGCAGCT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTCTACTGAGCACTCTCTaGTCAGACAGGAGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSLLSTL*SDRSRS Trigger: GCTCCGGCTCCTGTCTGAGCAGAGAGTGCTCAGTAG...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTCACTTCCTGCCGGTaGCTCCTATGTAGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLTSCR*LLCSCT Trigger: GGTGCAGCTACATAGGAGCCACCGGCAGGAAGTGAG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGATGCTTCTTCAGTGACTaGTATTTGTCTTTCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGCFFSD*YLSFIK Trigger: CTTGATGAAAGACAAATACCAGTCACTGAAGAAGCA...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAACAGCTCGTCCTTTGTaGTTTCATTTTCTTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: QASALTYAKLHKGVPRIGTARPL*FHFLCL Trigger: TAAACAAAGAAAATGAAAGCACAAAGGACGAGCTGT...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTGATTCCTCCTCCCTGTaGGGTGGGAGTCTAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSDSSSL*GGSLET Trigger: AGTTTCTAGACTCCCACCTCACAGGGAGGAGGAATC...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTAGCTGCGCCTTCTGCTaGTGTTTCAGAGCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSSCAFC*CFRASH Trigger: GTGTGAAGCTCTGAAACAGCAGCAGAAGGCGCAGCT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTAGCTTCTGCTTCAGCTaGTTCTCGCCAAGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSSFCFS*FSPSLA Trigger: AGCAAGGCTTGGCGAGAAGCAGCTGAAGCAGAAGCT...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTTCGATCCTCCACCTCTaGGAACAGCGAGTTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSSILHL*EQRVPF Trigger: AAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGA...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCATCCTCAGTGGCACTaGCAGCAGCTGTTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSHPQWH*QQLFLL Trigger: CAGAAGAAACAGCTGCTGCCAGTGCCACTGAGGATG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTCCTCCCTGTGAGGTaGGAGTCTAGAAACTCCATC | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLLPVR*ESRNSI Trigger: GATGGAGTTTCTAGACTCCCACCTCACAGGGAGGAG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTAGCTCCACTTCTCTTTaGAGGGCATGCTTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSSSTSL*RACFSW Trigger: CCAAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCT...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTATATCCAGGGCCCGCTaGCTCTCAAATAAAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSISRAR*LSNKAF Trigger: GAAGGCTTTATTTGAGAGCCAGCGGGCCCTGGATAT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTGTTCATACTTCAGCTTaGGTTCATCTAGCTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSVHTSA*VHLASL Trigger: GAGCGAAGCTAGATGAACTCAAGCTGAAGTATGAAC...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTCTTCTCGCCAAGCCTTaGTTCATCCAATTCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSLLAKP*FIQFHF Trigger: AAAGTGGAATTGGATGAAGCAAGGCTTGGCGAGAAG...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTAGCCTGTCTACCTGGTaGAGTAAGGAAGTATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSSLSTW*SKEVLR Trigger: TCTCAATACTTCCTTACTGCACCAGGTAGACAGGCT...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTCTTCTGTTCTATCATaGCAAACAACCGCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSSSVLS*QTTAPA Trigger: AGCAGGAGCGGTTGTTTGCCATGATAGAACAGAAGA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTGGTGAACGCATTTTaGTTCTTCAGTGACTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLVNAF*FFSDWY Trigger: ATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTTAAGCCTGTCTACCTaGTGCAGTAAGGAAGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLSLST*CSKEVL Trigger: CAATACTTCCTTACTGCACCAGGTAGACAGGCTTAA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTGTTTCTTCTGGCGTaGTTATATTCAATGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLFLLA*LYSMAA Trigger: TGCTGCCATTGAATATAACCACGCCAGAAGAAACAG...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTTAACCTGGGAGAATTaGGGGTATTCCCACTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSLTWEN*GYSHFV Trigger: AACAAAGTGGGAATACCCCCAATTCTCCCAGGTTAA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTGCTCTTGTTTGTACTaGAGTTCATTCACCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSCSCLY*SSFTSS Trigger: AGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTTCACTTTCTGAGAGCTaGAGGTGTCTTTCATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSSLSES*RCLSFV Trigger: TACAAATGAAAGACACCTGCAGCTCTCAGAAAGTGA...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTATCATCATTTCTTCATaGCATTTATCCAGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSNTASRFKFSHSLLIWSIIISS*HLSSWL Trigger: GAGCCAACTGGATAAATGTCATGAAGAAATGATGAT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR TCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTGTATTTCTCTGCTGTaGTCATCATTTCTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSCISLL*SSFLHD Trigger: GTCATGAAGAAATGATGATCACAGCAGAGAAATACA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CCA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTTCTTCTGTTTCTTCTaGCGTGGTTATATTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSNSTSNTASRFKFSHSFFCFF*RGYIQW Trigger: CCATTGAATATAACCACGCCAGAAGAAACAGAAGAA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | TTGCCACCCTTCGATCCTCCACCTCTGCGAACAGCGAGTTCCCTTTaGTATTGGGGTCCGCCGCCTGCTGGAGTGCGTGACCCAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPPFDPPPLRTASSL*YWGPPPAGVRDPAV Trigger: TACAGCTGGGTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | CCCTTCGATCCTCCACCTCTGCGAACAGCGAGTTCCCTTTGCTATTaGGGTCCGCCGCCTGCTGGAGTGCGTGACCCAGCTGTACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFDPPPLRTASSLCY*GPPPAGVRDPAVPE Trigger: TTCAGGTACAGCTGGGTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | CAAGTTGAGCTGGCGTTCCATTGCCACCCTTCGATCCTCCACCTCTaGGAACAGCGAGTTCCCTTTGCTATTGGGGTCCGCCGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVELAFHCHPSILHL*EQRVPFAIGVRRLL Trigger: CAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | GAACAGCGAGTTCCCTTTGCTATTGGGGTCCGCCGCCTGCTGGAGTaGGTGACCCAGCTGTACCTGAAGATCCTGGTTCTCTACACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQRVPFAIGVRRLLE*VTQLYLKILVLYTS Trigger: GCTCGTGTAGAGAACCAGGATCTTCAGGTACAGCTGGGTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | TGGCTCCTATGTAGCTGCACCTCTAGCTGCTCCAGCTGCGCCTTCTaGTGCTGTTTCAGAGCTTCACACTCACAGCTCAGGCTGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: WLLCSCTSSCSSCAF*CCFRASHSQLRLSN Trigger: GTTAGACAGCCTGAGCTGTGAGTGTGAAGCTCTGAAACAGCAGCAGAAGGCGCAGCTGGAGCAGCTAGAGGTGCAGCTACATAGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | CACTTCTTCTCCTTCTTCGGCTGTGTATCCAGATGCAGGTTCTTATaGGGAGAGAGGCTGGCTGGCTGCACACATGAAGAGGCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HFFSFFGCVSRCRFL*GERLAGCTHEEAGC Trigger: ACAGCCAGCCTCTTCATGTGTGCAGCCAGCCAGCCTCTCTCCTCATAAGAACCTGCATCTGGATACACAGCCGAAGAAGGAGAAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | TTCAGATTTTCTAACTTGTTCTTCAGGTCGCTCACTTCCTGCCGGTaGCTCCTATGTAGCTGCACCTCTAGCTGCTCCAGCTGCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRFSNLFFRSLTSCR*LLCSCTSSCSSCAF Trigger: GAAGGCGCAGCTGGAGCAGCTAGAGGTGCAGCTACATAGGAGCCACCGGCAGGAAGTGAGCGACCTGAAGAACAAGTTAGAAAATCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | TCCACTTTCAGATTTTCTAACTTGTTCTTCAGGTCGCTCACTTCCTaGCGGTGGCTCCTATGTAGCTGCACCTCTAGCTGCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STFRFSNLFFRSLTS*RWLLCSCTSSCSSC Trigger: GCAGCTGGAGCAGCTAGAGGTGCAGCTACATAGGAGCCACCGGCAGGAAGTGAGCGACCTGAAGAACAAGTTAGAAAATCTGAAAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | TCCATCCTCAGTGGCACTGGCAGCAGCTGTTTCTTCTGTTTCTTCTaGCGTGGTTATATTCAATGGCAGCACCTCGCGCCTCCTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SILSGTGSSCFFCFF*RGYIQWQHLAPPFE Trigger: CTCAAAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCACGCCAGAAGAAACAGAAGAAACAGCTGCTGCCAGTGCCACTGAGGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGAAAGGGCATGCTTCTCTaGGTTGTATTTCTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QASALTYAKLHKGVPRIGKGMLL*VVFLCC Trigger: ACAGCAGAGAAATACAACCAAGAGAAGCATGCCCTT...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGATGCAGTAAGGAAGTATaGAGACATTCTAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QASALTYAKLHKGVPRIGCSKEV*RHSSCS Trigger: AGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCA...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | ACGCATTTTGCTTCTTCAGTGACTGGTATTTGTCTTTCATCAAGTTaGGCTGGCGTTCCATTGCCACCCTTCGATCCTCCACCTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: THFASSVTGICLSSS*AGVPLPPFDPPPLR Trigger: TCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | TTTTGCTTCTTCAGTGACTGGTATTTGTCTTTCATCAAGTTGAGCTaGCGTTCCATTGCCACCCTTCGATCCTCCACCTCTGCGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FCFFSDWYLSFIKLS*RSIATLRSSTSANS Trigger: GCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | TGTCTTTCATTTGTAAACAGTTTCCGCTCAATATCCAGGGCCCGCTaGCTCTCAAATAAAGCCTTCATCCTCTGGATGGACAGCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLSFVNSFRSISRAR*LSNKAFILWMDSSS Trigger: GGACGAGCTGTCCATCCAGAGGATGAAGGCTTTATTTGAGAGCCAGCGGGCCCTGGATATTGAGCGGAAACTGTTTACAAATGAAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CAGGCTTCAGCACTGACCTATGCAAAGCTCCACAAGGGTGTCCCACGCATAGGATTCAGATTTTCTAACTaGTTCTTCAGGTCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QASALTYAKLHKGVPRIGFRFSN*FFRSLT Trigger: AGTGAGCGACCTGAAGAACAAGTTAGAAAATCTGAA...TCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | CAGCTCAGGCTGTCTAACATCCGACTCTTGAGCTCCACTTCTCTTTaGAGGGCATGCTTCTCTTGGTTGTATTTCTCTGCTGTGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLRLSNIRLLSSTSL*RACFSWLYFSAVII Trigger: GATGATCACAGCAGAGAAATACAACCAAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAGACAGCCTGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | TCAGAGCTTCACACTCACAGCTCAGGCTGTCTAACATCCGACTCTTaGGCTCCACTTCTCTTTGAAGGGCATGCTTCTCTTGGTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SELHTHSSGCLTSDS*APLLFEGHASLGCI Trigger: AATACAACCAAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAGACAGCCTGAGCTGTGAGTGTGAAGCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | ACAGTGTTATCTTTTAAGCTATTAAGACAGGATTCCTCCTCCCTGTaGGGTGGGAGTCTAGAAACTCCATCCTCAGTGGCACTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLSFKLLRQDSSSL*GGSLETPSSVALAA Trigger: TGCTGCCAGTGCCACTGAGGATGGAGTTTCTAGACTCCCACCTCACAGGGAGGAGGAATCCTGTCTTAATAGCTTAAAAGATAACACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | GGCAGCAGCTGTTTCTTCTGTTTCTTCTGGCGTGGTTATATTCAATaGCAGCACCTCGCGCCTCCTTTTGAGTACAGGTACTTCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSCFFCFFWRGYIQ*QHLAPPFEYRYFNS Trigger: AGAATTGAAGTACCTGTACTCAAAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCACGCCAGAAGAAACAGAAGAAACAGCTGCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | TTTATTTCACCATTCTTCTGTTCTATCATGGCAAACAACCGCTCCTaGTGTTCAAACTCAGTCTGCGAGCCCCTCATCCTCAGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FISPFFCSIMANNRS*CSNSVCEPLILSNV Trigger: CACATTGCTGAGGATGAGGGGCTCGCAGACTGAGTTTGAACAGCAGGAGCGGTTGTTTGCCATGATAGAACAGAAGAATGGTGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | GAGAATTGGGGGTATTCCCACTTTGTTCATGTAAGACCTCAATGTTaGCCGGACTATCCACAAGCTTCACACACTTCTTCTCCTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ENWGYSHFVHVRPQC*PDYPQASHTSSPSS Trigger: CGAAGAAGGAGAAGAAGTGTGTGAAGCTTGTGGATAGTCCGGCCAACATTGAGGTCTTACATGAACAAAGTGGGAATACCCCCAATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | AGCCTGTCTACCTGGTGCAGTAAGGAAGTATTGAGACATTCTAGCTaGTCTTGTTTGTACTGCAGTTCATTCACCTCTTCTTTGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSTWCSKEVLRHSS*SCLYCSSFTSSLRA Trigger: TGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCACCAGGTAGACAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | TGCTTCTCTTGGTTGTATTTCTCTGCTGTGATCATCATTTCTTCATaGCATTTATCCAGTTGGCTCTGCAGTTCCGTCTGCCTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFSWLYFSAVIIISS*HLSSWLCSSVCLSK Trigger: CTTGGAGAGGCAGACGGAACTGCAGAGCCAACTGGATAAATGTCATGAAGAAATGATGATCACAGCAGAGAAATACAACCAAGAGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | CATCTTGTTCATCTGATCTCTGGTGAACGCATTTTGCTTCTTCAGTaGCTGGTATTTGTCTTTCATCAAGTTGAGCTGGCGTTCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLVHLISGERILLLQ*LVFVFHQVELAFHC Trigger: GCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAGAGATCAGATGAACAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 90 bp | TGCAGTAAGGAAGTATTGAGACATTCTAGCTGCTCTTGTTTGTACTaGAGTTCATTCACCTCTTCTTTGAGGGCATTCTTCACACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSKEVLRHSSCSCLY*SSFTSSLRAFFTPS Trigger: GGAAGGTGTGAAGAATGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 90 bp | TCCTTTCCTTCACTTCTGTTGGAAGCTTTGATTCTGCAGTTAACCTaGGAGAATTGGGGGTATTCCCACTTTGTTCATGTAAGACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFPSLLLEALILQLT*ENWGYSHFVHVRPQ Trigger: TTGAGGTCTTACATGAACAAAGTGGGAATACCCCCAATTCTCCCAGGTTAACTGCAGAATCAAAGCTTCCAACAGAAGTGAAGGAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTATGACATTTATCCAGTaGGCTCTGCAGTTCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSNTASRFKFSHSLLIWSMTFIQ*ALQFRL Trigger: CAGACGGAACTGCAGAGCCAACTGGATAAATGTCAT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTACCTCGCGCCTCCTTTaGAGTACAGGTACTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TSNTASRFKFSHSLLIWSTSRLL*STGTSI Trigger: AATTGAAGTACCTGTACTCAAAAGGAGGCGCGAGGT...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTGGTTCATACTTCAGCTaGAGTTCATCTAGCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCSNSTSNTASRFKFSHSGSYFS*SSSSFA Trigger: AGCGAAGCTAGATGAACTCAAGCTGAAGTATGAACC...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 90 bp | CTCATCCTCAGCAATGTGGAGATTTGTAACTTCATCTTGTTCATCTaGTCTCTGGTGAACGCATTTTGCTTCTTCAGTGACTGGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LILSNVEICNFILFI*SLVNAFCFFSDWYL Trigger: CAAATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAGAGATCAGATGAACAAGATGAAGTTACAAATCTCCACATTGCTGAGGATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTGGACAGCTCGTCCTTaGTGCTTTCATTTTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCSNSTSNTASRFKFSHSWTARP*CFHFLC Trigger: ACAAAGAAAATGAAAGCACAAAGGACGAGCTGTCCA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTTCGTCTTCACACTCTTaGAGTTTGTTCCGAAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TSNTASRFKFSHSLLIWSSSSHS*SLFRRF Trigger: AAATCTTCGGAACAAACTCAAAGAGTGTGAAGACGA...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | ACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTCTTCTGATCTGGTCTGCTCCTTTTCCCAATTaGCTTGTAGTTTCTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSNTASRFKFSHSLLIWSAPFPN*LVVSIL Trigger: AAGGATAGAAACTACAAGCAAATTGGGAAAAGGAGC...AGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS-3UTR CAA 90 bp | CCATGTTCAAACTCCACATCCAACACAGCAAGTAGGTTTAAATTCTCCCATTCTTCACACTCTTTGAGTTaGTTCCGAAGATTTGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PCSNSTSNTASRFKFSHSSHSLS*FRRFVI Trigger: TATCACAAATCTTCGGAACAAACTCAAAGAGTGTGA...AGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | CCTCCACCTCTGCGAACAGCGAGTTCCCTTTGCTATTaGGGTCCGCCGCCTGCTGGAGTGCGTGACCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPLRTASSLCY*GPPPAGVRDPA Trigger: AGCTGGGTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | TTCGATCCTCCACCTCTGCGAACAGCGAGTTCCCTTTaGTATTGGGGTCCGCCGCCTGCTGGAGTGCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FDPPPLRTASSL*YWGPPPAGVRD Trigger: GTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | CTGGCGTTCCATTGCCACCCTTCGATCCTCCACCTCTaGGAACAGCGAGTTCCCTTTGCTATTGGGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LAFHCHPSILHL*EQRVPFAIGVR Trigger: GCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | CAGTCTCAAGAGCCAGCAGCTCCGAAGACATGCTACTaGGCACTCTCTGCTCAGACAGGAGCCGGAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QSQEPAAPKTCY*ALSAQTGAGAL Trigger: AAGAGCTCCGGCTCCTGTCTGAGCAGAGAGTGCTCAGTAGCATGTCTTCGGAGCTGCTGGCTCTTGAGACTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | CACCTCTTCTTTGAGGGCATTCTTCACACCTTCCGCTaGCGTCAGCTCAGTCTCAAGAGCCAGCAGCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HLFFEGILHTFR*RQLSLKSQQLR Trigger: TCGGAGCTGCTGGCTCTTGAGACTGAGCTGACGGCAGCGGAAGGTGTGAAGAATGCCCTCAAAGAAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | AGAAGTTCCCCCTGCAGATCCAGCTTCTGCTTCAGCTaGTTCTCGCCAAGCCTTGCTTCATCCAATTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSSPCRSSFCFS*FSPSLASSNST Trigger: AGTGGAATTGGATGAAGCAAGGCTTGGCGAGAAGCAGCTGAAGCAGAAGCTGGATCTGCAGGGGGAACTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | AGTGGCACTGGCAGCAGCTGTTTCTTCTGTTTCTTCTaGCGTGGTTATATTCAATGGCAGCACCTCGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGTGSSCFFCFF*RGYIQWQHLAP Trigger: AGGCGCGAGGTGCTGCCATTGAATATAACCACGCCAGAAGAAACAGAAGAAACAGCTGCTGCCAGTGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
||
| CDS GCA 72 bp | AGATTTTCTAACTTGTTCTTCAGGTCGCTCACTTCCTaGCGGTGGCTCCTATGTAGCTGCACCTCTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RFSNLFFRSLTS*RWLLCSCTSSC Trigger: GCAGCTAGAGGTGCAGCTACATAGGAGCCACCGGCAGGAAGTGAGCGACCTGAAGAACAAGTTAGAAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
||
| CDS GCA 72 bp | GTATTTGTCTTTCATCAAGTTGAGCTGGCGTTCCATTaGCACCCTTCGATCCTCCACCTCTGCGAACAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VFVFHQVELAFH*HPSILHLCEQR Trigger: TCGCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | ATGGCAAACAACCGCTCCTGCTGTTCAAACTCAGTCTaGGAGCCCCTCATCCTCAGCAATGTGGAGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: MANNRSCCSNSV*EPLILSNVEIC Trigger: ACAAATCTCCACATTGCTGAGGATGAGGGGCTCGCAGACTGAGTTTGAACAGCAGGAGCGGTTGTTTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | CACTGGCAGCAGCTGTTTCTTCTGTTTCTTCTGGCGTaGTTATATTCAATGGCAGCACCTCGCGCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HWQQLFLLFLLA*LYSMAAPRASF Trigger: AAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCACGCCAGAAGAAACAGAAGAAACAGCTGCTGCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | CACACTCACAGCTCAGGCTGTCTAACATCCGACTCTTaGGCTCCACTTCTCTTTGAAGGGCATGCTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HTHSSGCLTSDS*APLLFEGHASL Trigger: AAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAGACAGCCTGAGCTGTGAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 90 bp | AACGCATTTTGCTTCTTCAGTGACTGGTATTTGTCTTTCATCAAGTaGAGCTGGCGTTCCATTGCCACCCTTCGATCCTCCACCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: NAFCFFSDWYLSFIK*SWRSIATLRSSTSA Trigger: CGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | GCTTCTTCAGTGACTGGTATTTGTCTTTCATCAAGTTaGGCTGGCGTTCCATTGCCACCCTTCGATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASSVTGICLSSS*AGVPLPPFDPP Trigger: TGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | TTTGTAAACAGTTTCCGCTCAATATCCAGGGCCCGCTaGCTCTCAAATAAAGCCTTCATCCTCTGGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: FVNSFRSISRAR*LSNKAFILWMD Trigger: GTCCATCCAGAGGATGAAGGCTTTATTTGAGAGCCAGCGGGCCCTGGATATTGAGCGGAAACTGTTTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | TGCTTCTTCAGTGACTGGTATTTGTCTTTCATCAAGTaGAGCTGGCGTTCCATTGCCACCCTTCGATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFFSDWYLSFIK*SWRSIATLRSS Trigger: GGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 90 bp | GGAGAATTGGGGGTATTCCCACTTTGTTCATGTAAGACCTCAATGTaGGCCGGACTATCCACAAGCTTCACACACTTCTTCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GELGVFPLCSCKTSM*AGLSTSFTHFFSFF Trigger: GAAGAAGGAGAAGAAGTGTGTGAAGCTTGTGGATAGTCCGGCCAACATTGAGGTCTTACATGAACAAAGTGGGAATACCCCCAATTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | TGTTTCTTCTGTTTCTTCTGGCGTGGTTATATTCAATaGCAGCACCTCGCGCCTCCTTTTGAGTACAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: CFFCFFWRGYIQ*QHLAPPFEYRY Trigger: GTACCTGTACTCAAAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCACGCCAGAAGAAACAGAAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GTGGTTATATTCAATGGCAGCACCTCGCGCCTCCTTTaGAGTACAGGTACTTCAATTCTCTCTTCCGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VVIFNGSTSRLL*STGTSILSSGS Trigger: TGAACCGGAAGAGAGAATTGAAGTACCTGTACTCAAAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GGGGTATTCCCACTTTGTTCATGTAAGACCTCAATGTaGGCCGGACTATCCACAAGCTTCACACACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GVFPLCSCKTSM*AGLSTSFTHFF Trigger: GAAGAAGTGTGTGAAGCTTGTGGATAGTCCGGCCAACATTGAGGTCTTACATGAACAAAGTGGGAATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | CTGTCTAACATCCGACTCTTGAGCTCCACTTCTCTTTaGAGGGCATGCTTCTCTTGGTTGTATTTCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSNIRLLSSTSL*RACFSWLYFSA Trigger: AGCAGAGAAATACAACCAAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | GCTGGCTGCACACATGAAGAGGCTGGCTGTTTCCACTaGACAGTGTTATCTTTTAAGCTATTAAGACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: AGCTHEEAGCFH*TVLSFKLLRQD Trigger: ATCCTGTCTTAATAGCTTAAAAGATAACACTGTGCAGTGGAAACAGCCAGCCTCTTCATGTGTGCAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | AGGTGCTGTCTTCTAGCACACAAGCGGTGTCTGATGTaGAAGGCCTCGATTCCATACTTTCATATAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RCCLLAHKRCLM*KASIPYFHISS Trigger: AGAACTTATATGAAAGTATGGAATCGAGGCCTTCCACATCAGACACCGCTTGTGTGCTAGAAGACAGCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | GGGTATTCCCACTTTGTTCATGTAAGACCTCAATGTTaGCCGGACTATCCACAAGCTTCACACACTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GYSHFVHVRPQC*PDYPQASHTSS Trigger: AGAAGAAGTGTGTGAAGCTTGTGGATAGTCCGGCCAACATTGAGGTCTTACATGAACAAAGTGGGAATACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GATCCAGCTTCTGCTTCAGCTGCTTCTCGCCAAGCCTaGCTTCATCCAATTCCACTTTCAGATTTTCTAACT | + |
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Preference number: 6 (lower is better) Translates to: DPASASAASRQA*LHPIPLSDFLT Trigger: AGTTAGAAAATCTGAAAGTGGAATTGGATGAAGCAAGGCTTGGCGAGAAGCAGCTGAAGCAGAAGCTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | CTGGTGAACGCATTTTGCTTCTTCAGTGACTGGTATTaGTCTTTCATCAAGTTGAGCTGGCGTTCCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVNAFCFFSDWY*SFIKLSWRSIA Trigger: GGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | CATCTGATCTCTGGTGAACGCATTTTGCTTCTTCAGTaGCTGGTATTTGTCTTTCATCAAGTTGAGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: HLISGERILLLQ*LVFVFHQVELA Trigger: CGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAGAGATCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | CGCTCCTCTTTTTCTTCTTTAAGCCTGTCTACCTGGTaGAGTAAGGAAGTATTGAGACATTCTAGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSSFSSLSLSTW*SKEVLRHSSCS Trigger: AGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCACCAGGTAGACAGGCTTAAAGAAGAAAAAGAGGAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GTTGGAAGCTTTGATTCTGCAGTTAACCTGGGAGAATaGGGGGTATTCCCACTTTGTTCATGTAAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: VGSFDSAVNLGE*GVFPLCSCKTS Trigger: TGAGGTCTTACATGAACAAAGTGGGAATACCCCCAATTCTCCCAGGTTAACTGCAGAATCAAAGCTTCCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 90 bp | ACCTGGTGCAGTAAGGAAGTATTGAGACATTCTAGCTGCTCTTGTTaGTACTGCAGTTCATTCACCTCTTCTTTGAGGGCATTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: TWCSKEVLRHSSCSC*YCSSFTSSLRAFFT Trigger: TGTGAAGAATGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCACCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | TGGTTGTATTTCTCTGCTGTGATCATCATTTCTTCATaGCATTTATCCAGTTGGCTCTGCAGTTCCGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WLYFSAVIIISS*HLSSWLCSSVC Trigger: GCAGACGGAACTGCAGAGCCAACTGGATAAATGTCATGAAGAAATGATGATCACAGCAGAGAAATACAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | ACCTGGTGCAGTAAGGAAGTATTGAGACATTCTAGCTaGTCTTGTTTGTACTGCAGTTCATTCACCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TWCSKEVLRHSS*SCLYCSSFTSS Trigger: AGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCACCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CCA 72 bp | TCACTTCTGTTGGAAGCTTTGATTCTGCAGTTAACCTaGGAGAATTGGGGGTATTCCCACTTTGTTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: SLLLEALILQLT*ENWGYSHFVHV Trigger: TACATGAACAAAGTGGGAATACCCCCAATTCTCCCAGGTTAACTGCAGAATCAAAGCTTCCAACAGAAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 90 bp | GAGCACTGCGTTTCTGGGGCTGACTTTGAGGACACATATATGATGTaGTGTGATTTCTTACAAGCTCCTTTTCCCAATTTGCTTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: EHCVSGADFEDTYMM*CDFLQAPFPNLLVV Trigger: AACTACAAGCAAATTGGGAAAAGGAGCTTGTAAGAAATCACACAACATCATATATGTGTCCTCAAAGTCAGCCCCAGAAACGCAGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS GCA 72 bp | GAAGTATTGAGACATTCTAGCTGCTCTTGTTTGTACTaGAGTTCATTCACCTCTTCTTTGAGGGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EVLRHSSCSCLY*SSFTSSLRAFF Trigger: GAAGAATGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | AGTAAGGAAGTATTGAGACATTCTAGCTGCTCTTGTTaGTACTGCAGTTCATTCACCTCTTCTTTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SKEVLRHSSCSC*YCSSFTSSLRA Trigger: TGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GGTACTTCAATTCTCTCTTCCGGTTCATACTTCAGCTaGAGTTCATCTAGCTTCGCTCTCAGTTTCATGTTT | + |
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Preference number: 6 (lower is better) Translates to: GTSILSSGSYFS*SSSSFALSFMF Trigger: AAACATGAAACTGAGAGCGAAGCTAGATGAACTCAAGCTGAAGTATGAACCGGAAGAGAGAATTGAAGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 90 bp | TTGAGTACAGGTACTTCAATTCTCTCTTCCGGTTCATACTTCAGCTaGAGTTCATCTAGCTTCGCTCTCAGTTTCATGTTTTCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSTGTSILSSGSYFS*SSSSFALSFMFSLS Trigger: AGAAAGTGAAAACATGAAACTGAGAGCGAAGCTAGATGAACTCAAGCTGAAGTATGAACCGGAAGAGAGAATTGAAGTACCTGTACTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | AGCAATGTGGAGATTTGTAACTTCATCTTGTTCATCTaGTCTCTGGTGAACGCATTTTGCTTCTTCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SNVEICNFILFI*SLVNAFCFFSD Trigger: GTCACTGAAGAAGCAAAATGCGTTCACCAGAGATCAGATGAACAAGATGAAGTTACAAATCTCCACATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS TCA 72 bp | GTACTTCAATTCTCTCTTCCGGTTCATACTTCAGCTTaGGTTCATCTAGCTTCGCTCTCAGTTTCATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLQFSLPVHTSA*VHLASLSVSCF Trigger: AAAACATGAAACTGAGAGCGAAGCTAGATGAACTCAAGCTGAAGTATGAACCGGAAGAGAGAATTGAAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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| CDS CAA 72 bp | GTTTCTGGGGCTGACTTTGAGGACACATATATGATGTaGTGTGATTTCTTACAAGCTCCTTTTCCCAATTTG | + |
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Preference number: 6 (lower is better) Translates to: VSGADFEDTYMM*CDFLQAPFPNL Trigger: CAAATTGGGAAAAGGAGCTTGTAAGAAATCACACAACATCATATATGTGTCCTCAAAGTCAGCCCCAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093191.3 |
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