Pregenerated sensors for SPDEF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024215Ensembl transcript IDs: ENSMUST00000025054.10, ENSMUST00000114870.9, ENSMUST00000138970.3, ENSMUST00000167489.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGACCTTGGGTTCTGGGATACCAGCAGCCCCTGAATTCAGAGTaGGCAGAGAGGACCAGGCCAACCAGAGAGTGGCTGCCTGGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LGPWVLGYQQPLNSE*AERTRPTREWLPGA Trigger: TGCCCCAGGCAGCCACTCTCTGGTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGAACCCAAGGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR TCA 90 bp | TGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGCCCCTaGATTCAGAGTGAGCAGAGAGGACCAGGCCAACCAGAGAGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: WLSIWDLGFWDTSSP*IQSEQRGPGQPESG Trigger: GCCACTCTCTGGTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR TCA 90 bp | TACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTGTCCGGTaGGCTGACTTGGTCCAGTCCCTGTGTGCTGTAGGTGGTTCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: YRIVAGAETSDITVR*ADLVQSLCAVGGSP Trigger: GGGGGAACCACCTACAGCACACAGGGACTGGACCAAGTCAGCTCACCGGACAGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| 3UTR TCA 90 bp | GGTGGTTCCCCCAGGAATTCCACAGTCCAAGCCCGGTTCCGTTTGTaGACAATCCTAGCTCCCTCGATCTTCCTGGGGCCTGTGTATGAC | + |
|
Preference number: 1 (lower is better) Translates to: GGSPRNSTVQARFRL*TILAPSIFLGPVYD Trigger: GTCATACACAGGCCCCAGGAAGATCGAGGGAGCTAGGATTGTTCACAAACGGAACCGGGCTTGGACTGTGGAATTCCTGGGGGAACCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| 3UTR GCA 90 bp | CACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATaGCAGATATGGTACAGGATTGTGGCAGGAGCAGAGACCAGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: HPWLPNAGYRHLLAP*QIWYRIVAGAETSD Trigger: GTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR CCA 90 bp | CTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATaGTACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LPNAGYRHLLAPCQI*YRIVAGAETSDITV Trigger: GACAGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR TCA 90 bp | TGTGTGAACAATCCTAGCTCCCTCGATCTTCCTGGGGCCTGTGTATaGCCCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: CVNNPSSLDLPGACV*PRELMCIPRSVAVY Trigger: ATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGCTAGGATTGTTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167489.2 |
||
| 3UTR CCA 90 bp | CTAACAGTTATCTTACGTCTTTATTATCCATCCCCAGGGCACCCCTaGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: LTVILRLYYPSPGHP*LPNAGYRHLLAPCQ Trigger: CTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGATAATAAAGACGTAAGATAACTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| 3UTR TCA 90 bp | TTTGTGAACAATCCTAGCTCCCTCGATCTTCCTGGGGCCTGTGTATaGCCCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: FVNNPSSLDLPGACV*PRELMCIPRSVAVY Trigger: ATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGCTAGGATTGTTCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCAACCAGAGAGTGGCTaGCTGGGGCAGGTTGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PRAPLASQRRVQTSLSTMQPESG*LGQVVG Trigger: GCCTACAACCTGCCCCAGGCAGCCACTCTCTGGTTG...CATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGCAACCAGAGAGTGGCTaGCTGGGGCAGGTTGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PRELMCIPRSVAVYLGPWQPESG*LGQVVG Trigger: GCCTACAACCTGCCCCAGGCAGCCACTCTCTGGTTG...CCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGAGGCCAACCAGAGAGTaGCTGCCTGGGGCAGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PRELMCIPRSVAVYLGPWRPTRE*LPGAGC Trigger: ACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCT...CCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR-3UTR TCA 90 bp | TATCCATCCCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGATACCAGCAGCCCCTaGATTCAGAGTGAGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YPSPGHPWLPNAGYRHLLDTSSP*IQSEQR Trigger: TCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATC...TAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCAGGCCAACCAGAGAGTaGCTGCCTGGGGCAGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ESSCVSLDQWLSIWDLGFRPTRE*LPGAGC Trigger: ACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCT...GAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTAGGCCAACCAGAGAGTaGCTGCCTGGGGCAGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PCQIWYRIVAGAETSDITRPTRE*LPGAGC Trigger: ACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCT...AGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCCTCGATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCGTCTATCTGGGACCTTaGGTTCTGGGATACCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: APSIFLGPVYDPESSCVSVYLGP*VLGYQQ Trigger: CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGAC...GGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATAGATACCAGCAGCCCCTaGATTCAGAGTGAGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HPWLPNAGYRHLLAPCQIDTSSP*IQSEQR Trigger: TCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATC...TATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGACCCCTGAATTCAGAGTaGGCAGAGAGGACCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QTSLSTMPDMVQDCGRSRPLNSE*AERTRP Trigger: TGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGG...TCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGGATACCAGCAGCCCCTaGATTCAGAGTGAGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PESSCVSLDQWLSIWDLGDTSSP*IQSEQR Trigger: TCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATC...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGACCTGGGGCCTGTGTATaGCCCAGAGAGCTCATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GYRHLLAPCQIWYRIVAGPGACV*PRELMC Trigger: ACACATGAGCTCTCTGGGTCATACACAGGCCCCAGG...TCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGCAGTGGCTGTCTATCTaGGACCTTGGGTTCTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ASQRRVQTSLSTMPDMVQQWLSI*DLGFWD Trigger: ATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTG...CTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGACAGTGGCTGTCTATCTaGGACCTTGGGTTCTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GYRHLLAPCQIWYRIVAGQWLSI*DLGFWD Trigger: ATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTG...TCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGTCTATCTGGGACCTTaGGTTCTGGGATACCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NAGYRHLLAPCQIWYRIVVYLGP*VLGYQQ Trigger: CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGAC...CACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTGGTATCCCTAGATCAGTaGCTGTCTATCTGGGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: HARYGTGLWQEQRPVTSLVSLDQ*LSIWDL Trigger: AAGGTCCCAGATAGACAGCCACTGATCTAGGGATAC...CAGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGTATCCCTAGATCAGTaGCTGTCTATCTGGGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: QTSLSTMPDMVQDCGRSRVSLDQ*LSIWDL Trigger: AAGGTCCCAGATAGACAGCCACTGATCTAGGGATAC...TCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR TCA 72 bp | AATCCTAGCTCCCTCGATCTTCCTGGGGCCTGTGTATaGCCCAGAGAGCTCATGTGTATCCCTAGATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NPSSLDLPGACV*PRELMCIPRSV Trigger: CACTGATCTAGGGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGCTAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR CCA 72 bp | TGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTaGGTTCTGGGATACCAGCAGCCCCTGAATTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CIPRSVAVYLGP*VLGYQQPLNSE Trigger: CTCTGAATTCAGGGGCTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| 3UTR CCA 72 bp | GCAGGGTACAGACATCTCTTAGCACCATGCCAGATATaGTACAGGATTGTGGCAGGAGCAGAGACCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AGYRHLLAPCQI*YRIVAGAETSD Trigger: GTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| 3UTR CCA 72 bp | ATCTTACGTCTTTATTATCCATCCCCAGGGCACCCCTaGCTTCCCAACGCAGGGTACAGACATCTCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILRLYYPSPGHP*LPNAGYRHLLA Trigger: TGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGATAATAAAGACGTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | GGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACCAGAACCGGGGGACACGTTaGTCAGGCCTGGGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIPAAPEFRVSREDQANQNRGTR*SGLGWH Trigger: GTGCCAGCCCAGGCCTGAGCAACGTGTCCCCCGGTT...CTGGTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCAAAGCAGACAGGCCCTaGTCAGGGGTGGCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIPRAPLASQRRVQTSLSKADRP*SGVAGG Trigger: TCCACCCGCCACCCCTGAGCAGGGCCTGTCTGCTTT...GCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCAGAGAGGACCAGGCCAACCAGAGAGTGGCTGCCTGGGGCAGGTTGTACTGGAAGGCCTTGCCTaGTGGAGGCAGCCGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEQRGPGQPESGCLGQVVLEGLA*WRQPVL Trigger: CAGTACCGGCTGCCTCCAGCAGGCAAGGCCTTCCAG...TACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCTGGTCCTCTCTGCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGAGCCCTCCTCGCTGGTaGAGGCGCAGTAGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRAPLASQRRVQTSLSTMSPPRW*RRSSEG Trigger: CCCTTCACTACTGCGCCTCCACCAGCGAGGAGGGCT...CATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACCAGAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIPAAPEFRVSREDQANQRNCHR*MGCPEH Trigger: GTGCTCCGGGCAGCCCATTCACCTGTGGCAGTTCCT...CTGGTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCGGGCCTCGGGGACTTTaGCGACCCAGCTGCTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGIPAAPEFRVSREDQAGPRGL*RPSCYR Trigger: ACGATAGCAGCTGGGTCGCCAAAGTCCCCGAGGCCC...GGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTCGATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: APSIFLGPVYDPESSCVSRNCHR*MGCPEH Trigger: GTGCTCCGGGCAGCCCATTCACCTGTGGCAGTTCCT...GGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | GGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACCAGTTACCGCCCAGCTCCTaGAAGGCCTTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GIPAAPEFRVSREDQANQLPPSS*KALPAG Trigger: TCCAGCAGGCAAGGCCTTCCAGGAGCTGGGCGGTAA...CTGGTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCAGAGAGGACCAGGCCAACCAGAGAGTGGCTGCCTGGGGCAGGTTGTAACTGTTCCTCGGACATaGCGCACAGCTCCTTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQRGPGQPESGCLGQVVTVPRT*RTAPYR Trigger: GCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGT...TACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCTGGTCCTCTCTGCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACACTGCCACAGGTGAATaGGCTGCCCGGAGCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGIPAAPEFRVSREDQANTATGE*AARSTT Trigger: CGTCGTGCTCCGGGCAGCCCATTCACCTGTGGCAGT...GTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLASQRRVQTSLSTMPDMRNCHR*MGCPEH Trigger: GTGCTCCGGGCAGCCCATTCACCTGTGGCAGTTCCT...CATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGAACCGGGGGACACGTTaGTCAGGCCTGGGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPRSVAVYLGPWVLGYQQNRGTR*SGLGWH Trigger: GTGCCAGCCCAGGCCTGAGCAACGTGTCCCCCGGTT...CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | ATTATCCATCCCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTTACCGCCCAGCTCCTaGAAGGCCTTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIHPQGTPGFPTQGTDISLPPSS*KALPAG Trigger: TCCAGCAGGCAAGGCCTTCCAGGAGCTGGGCGGTAA...AGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGATAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATTTACCGCCCAGCTCCTaGAAGGCCTTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APLASQRRVQTSLSTMPDLPPSS*KALPAG Trigger: TCCAGCAGGCAAGGCCTTCCAGGAGCTGGGCGGTAA...ATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGAAAGCAGACAGGCCCTaGTCAGGGGTGGCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGKADRP*SGVAGG Trigger: TCCACCCGCCACCCCTGAGCAGGGCCTGTCTGCTTT...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGCTGGAAGGCCTTGCCTaGTGGAGGCAGCCGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGLEGLA*WRQPVL Trigger: CAGTACCGGCTGCCTCCAGCAGGCAAGGCCTTCCAG...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGACTGCCACAGGTGAATaGGCTGCCCGGAGCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGTATGE*AARSTT Trigger: CGTCGTGCTCCGGGCAGCCCATTCACCTGTGGCAGT...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGCTTCATCCAGGCCGCTaGCTTCCAGATGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLASQRRVQTSLSTMPDMLHPGR*LPDVQV Trigger: CACCTGGACATCTGGAAGTCAGCGGCCTGGATGAAG...CATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATCGGGCCACCTGTGCTaGGTCCTCAATTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGHPWLPNAGYRHLLAPSGHLC*VLNFED Trigger: ATCTTCAAAATTGAGGACTCAGCACAGGTGGCCCGA...TGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCACCATCGATTGCACCTaGTCTAGCGAGTGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGIPAAPEFRVSREDQATIDCT*SSECSS Trigger: GGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGT...GGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | TGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCTGGAAGGCCTTGCCTaGTGGAGGCAGCCGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: CIPRSVAVYLGPWVLGYQLEGLA*WRQPVL Trigger: CAGTACCGGCTGCCTCCAGCAGGCAAGGCCTTCCAG...CTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACATGTCCAGGTGGGCATaGAGTACATCCCCACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGIPAAPEFRVSREDQANMSRWA*STSPPK Trigger: CTTGGGTGGGGATGTACTGCATGCCCACCTGGACAT...GTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCCTAGATCAGGGGCCTCGGGGACTTTaGCGACCCAGCTGCTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLGPVYDPESSCVSLDQGPRGL*RPSCYR Trigger: ACGATAGCAGCTGGGTCGCCAAAGTCCCCGAGGCCC...CTGATCTAGGGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGAGCCCTCCTCGCTGGTaGAGGCGCAGTAGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQRRVQTSLSTMPDMVQSPPRW*RRSSEG Trigger: CCCTTCACTACTGCGCCTCCACCAGCGAGGAGGGCT...CTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | CCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTACTGCCACAGGTGAATaGGCTGCCCGGAGCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: PCQIWYRIVAGAETSDITTATGE*AARSTT Trigger: CGTCGTGCTCCGGGCAGCCCATTCACCTGTGGCAGT...AGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCTCGGGCCACCTGTGCTaGGTCCTCAATTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGIPAAPEFRVSREDQASGHLC*VLNFED Trigger: ATCTTCAAAATTGAGGACTCAGCACAGGTGGCCCGA...GGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAAAAGCAGACAGGCCCTaGTCAGGGGTGGCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLSTMPDMVQDCGRSRKADRP*SGVAGG Trigger: TCCACCCGCCACCCCTGAGCAGGGCCTGTCTGCTTT...TCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTCGATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCCCAGTCCCCAGGGTCTaGTGTGATGTTCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APSIFLGPVYDPESSCVSPVPRV*CDVQKL Trigger: AAGCTTCTGAACATCACAGCAGACCCTGGGGACTGG...GGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | TATCCATCCCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTACCAGTCCCCAGGGTCTaGTGTGATGTTCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YPSPGHPWLPNAGYRHLLPVPRV*CDVQKL Trigger: AAGCTTCTGAACATCACAGCAGACCCTGGGGACTGG...TAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGGGATGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | CAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGGGCCTCGGGGACTTTaGCGACCCAGCTGCTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLSTMPDMVQDCGRSRGPRGL*RPSCYR Trigger: ACGATAGCAGCTGGGTCGCCAAAGTCCCCGAGGCCC...TCTGCTCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGAGCCCTCCTCGCTGGTaGAGGCTGACTTCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: IPRSVAVYLGPWVLGYQQSPPRW*RLTSRC Trigger: ACATCTGGAAGTCAGCCTCCACCAGCGAGGAGGGCT...CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114870.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAGATATGGTACAGGATTGTGGCAGGAGCAGAGACCAGTGACATCACTGCTTCATCCAGGCCGCTaGCTTCCAGATGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HARYGTGLWQEQRPVTSLLHPGR*LPDVQV Trigger: CACCTGGACATCTGGAAGTCAGCGGCCTGGATGAAG...CAGTGATGTCACTGGTCTCTGCTCCTGCCACAATCCTGTACCATATCTGGCATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGCCATAGCTGTGGGGCTTaGGCAGCAGTTCTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLDQWLSIWDLGFWDTSSHSCGA*AAVLSG Trigger: TCCTGAAAGAACTGCTGCTCAAGCCCCACAGCTATG...GCTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | TGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGAGTGCTCATCCAACGTaGTCCCAGAGGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CIPRSVAVYLGPWVLGYQSAHPT*SQRPGC Trigger: ACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACT...CTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGAGTGCTCATCCAACGTaGTCCCAGAGGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNAGYRHLLAPCQIWYRSAHPT*SQRPGC Trigger: ACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACT...CCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGATGTCCAGGTGGGCATaGAGTACATCCCCACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGMSRWA*STSPPK Trigger: CTTGGGTGGGGATGTACTGCATGCCCACCTGGACAT...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGCATAGCTGTGGGGCTTaGGCAGCAGTTCTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGHSCGA*AAVLSG Trigger: TCCTGAAAGAACTGCTGCTCAAGCCCCACAGCTATG...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGACCATCGATTGCACCTaGTCTAGCGAGTGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGTIDCT*SSECSS Trigger: GGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGT...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCCTAGATCAGATGTCCAGGTGGGCATaGAGTACATCCCCACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFLGPVYDPESSCVSLDQMSRWA*STSPPK Trigger: CTTGGGTGGGGATGTACTGCATGCCCACCTGGACAT...CTGATCTAGGGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGGGAGGCAGCCGGTACTaGTGTTCTGTCCATAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPRSVAVYLGPWVLGYQQGGSRY*CSVHKS Trigger: GCTTTTATGGACAGAACACCAGTACCGGCTGCCTCC...CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACCTAACAGTTATCTTACGTCTTTATTATCCATCCCCAGGGCACCCCACTGTTCCTCGGACATaGCGCACAGCTCCTTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEDLTVILRLYYPSPGHPTVPRT*RTAPYR Trigger: GCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGT...GGGGTGCCCTGGGGATGGATAATAAAGACGTAAGATAACTGTTAGGTCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS-3UTR CCA 90 bp | ATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACACTGTTCCTCGGACATaGCGCACAGCTCCTTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: MCIPRSVAVYLGPWVLGYTVPRT*RTAPYR Trigger: GCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGT...GTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCACCACCCTAAGCACTTGGAACCCCAGCCACCCTTGACTGCTGCTGGCTGTAATACTGGCGGATaGAGCGGCTTAGTTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGHHPKHLEPQPPLTAAGCNTGG*SGLVYH Trigger: ATGATAAACTAAGCCGCTCCATCCGCCAGTATTACA...GCCAGCAGCAGTCAAGGGTGGCTGGGGTTCCAAGTGCTTAGGGTGGTGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGACCATCGATTGCACCTaGTCTAGCGAGTGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSCVSLDQWLSIWDLGFWTIDCT*SSECSS Trigger: GGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGT...CCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGATACCAGCAGCCCCTGAATTCAGAGTGAGCAGAGAGGACCAGGCCAACCTGAGTCCTCAATTTTaGAGATGCCTTTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGIPAAPEFRVSREDQANLSPQF*RCLSPC Trigger: ACAAGGAGAAAGGCATCTTCAAAATTGAGGACTCAG...GTTGGCCTGGTCCTCTCTGCTCACTCTGAATTCAGGGGCTGCTGGTATCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTCGATCTTCCTGGGGCCTGTGTATGACCCAGAGAGCTCATGTGTATCCTGTCGGGTTTACGAATaGTGCCCTTCTTGTAATACT | + |
|
Preference number: 4 (lower is better) Translates to: APSIFLGPVYDPESSCVSCRVYE*CPSCNT Trigger: AGTATTACAAGAAGGGCATCATTCGTAAACCCGACA...GGATACACATGAGCTCTCTGGGTCATACACAGGCCCCAGGAAGATCGAGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCCAGTCCCCAGGGTCTaGTGTGATGTTCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MCIPRSVAVYLGPWVLGYPVPRV*CDVQKL Trigger: AAGCTTCTGAACATCACAGCAGACCCTGGGGACTGG...GTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTGGAGGCAGCCGGTACTaGTGTTCTGTCCATAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RELMCIPRSVAVYLGPWVGGSRY*CSVHKS Trigger: GCTTTTATGGACAGAACACCAGTACCGGCTGCCTCC...AACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGATTGTGGCAGGATCGGGCCACCTGTGCTaGGTCCTCAATTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYRHLLAPCQIWYRIVAGSGHLC*VLNFED Trigger: ATCTTCAAAATTGAGGACTCAGCACAGGTGGCCCGA...TCCTGCCACAATCCTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGACACTGGAGGACCTAACAGTTATCTTACGTCTTTATTATCCATCCCCAAGTGCTCATCCAACGTaGTCCCAGAGGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTLEDLTVILRLYYPSPSAHPT*SQRPGC Trigger: ACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACT...TGGGGATGGATAATAAAGACGTAAGATAACTGTTAGGTCCTCCAGTGTCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTGTCGGGTTTACGAATaGTGCCCTTCTTGTAATACT | + |
|
Preference number: 4 (lower is better) Translates to: PESSCVSLDQWLSIWDLGCRVYE*CPSCNT Trigger: AGTATTACAAGAAGGGCATCATTCGTAAACCCGACA...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGACACTGGAGGACCTAACAGTTATCTTACGTCTTTATTATCCATCCCCACATAGCTGTGGGGCTTaGGCAGCAGTTCTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLEDLTVILRLYYPSPHSCGA*AAVLSG Trigger: TCCTGAAAGAACTGCTGCTCAAGCCCCACAGCTATG...TGGGGATGGATAATAAAGACGTAAGATAACTGTTAGGTCCTCCAGTGTCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGCTGAGTCCTCAATTTTaGAGATGCCTTTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASQRRVQTSLSTMPDMVQLSPQF*RCLSPC Trigger: ACAAGGAGAAAGGCATCTTCAAAATTGAGGACTCAG...CTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGTGTCGGGTTTACGAATaGTGCCCTTCTTGTAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ASQRRVQTSLSTMPDMVQCRVYE*CPSCNT Trigger: AGTATTACAAGAAGGGCATCATTCGTAAACCCGACA...CTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGTGTAATACTGGCGGATaGAGCGGCTTAGTTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCVSLDQWLSIWDLGFWCNTGG*SGLVYH Trigger: ATGATAAACTAAGCCGCTCCATCCGCCAGTATTACA...CCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACTGTAATACTGGCGGATaGAGCGGCTTAGTTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCIPRSVAVYLGPWVLGYCNTGG*SGLVYH Trigger: ATGATAAACTAAGCCGCTCCATCCGCCAGTATTACA...GTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR TCA 90 bp | CCAGACACTGGAGGACCTAACAGTTATCTTACGTCTTTATTATCCATCCCCAGGCTGAGTCCTCAATTTTaGAGATGCCTTTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDTGGPNSYLTSLLSIPRLSPQF*RCLSPC Trigger: ACAAGGAGAAAGGCATCTTCAAAATTGAGGACTCAG...CCTGGGGATGGATAATAAAGACGTAAGATAACTGTTAGGTCCTCCAGTGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS CCA 90 bp | GAGGCCTGGCTGTCAATGACGGGACACTGCTCGGGCTCCTCCGGGTaGTCCTCCCCGGCACGGGCCTCGGGGACTTTGGCGACCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAWLSMTGHCSGSSG*SSPARASGTLATQL Trigger: CAGCTGGGTCGCCAAAGTCCCCGAGGCCCGTGCCGGGGAGGACCACCCGGAGGAGCCCGAGCAGTGTCCCGTCATTGACAGCCAGGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS CCA 90 bp | CATCCCCACCCAAGGGTGCACGCTGACGGAACTGTTCCTCGGACATaGCGCACAGCTCCTTACCGCCCAGCTCCTGGAAGGCCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPHPRVHADGTVPRT*RTAPYRPAPGRPCL Trigger: CAGGCAAGGCCTTCCAGGAGCTGGGCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGTTCCGTCAGCGTGCACCCTTGGGTGGGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS CCA 90 bp | AGCACGACGAGTCCACCTCACCATCCGTCCAGCCCTCCTCGCTGGTaGAGGCGCAGTAGTGAAGGGTCCCAGGCGAGGTCCTCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STTSPPHHPSSPPRW*RRSSEGSQARSSPS Trigger: TGAAGGAGAGGACCTCGCCTGGGACCCTTCACTACTGCGCCTCCACCAGCGAGGAGGGCTGGACGGATGGTGAGGTGGACTCGTCGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS GCA 90 bp | GACAGGCCCTGCTCAGGGGTGGCGGGTGGACTAGGACTCCATTCCTaGTTCTCAGGGCCCATTGCTCCTGATGCTGCCTTCTCCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRPCSGVAGGLGLHS*FSGPIAPDAAFSVP Trigger: AGGGACGGAGAAGGCAGCATCAGGAGCAATGGGCCCTGAGAAGCAGGAATGGAGTCCTAGTCCACCCGCCACCCCTGAGCAGGGCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS TCA 90 bp | ATGTCCAGGTGGGCATGCAGTACATCCCCACCCAAGGGTGCACGCTaGCGGAACTGTTCCTCGGACATGGCGCACAGCTCCTTACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MSRWACSTSPPKGAR*RNCSSDMAHSSLPP Trigger: GGGCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGTTCCGTCAGCGTGCACCCTTGGGTGGGGATGTACTGCATGCCCACCTGGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS CCA 90 bp | AACTGTTCCTCGGACATGGCGCACAGCTCCTTACCGCCCAGCTCCTaGAAGGCCTTGCCTGCTGGAGGCAGCCGGTACTGGTGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NCSSDMAHSSLPPSS*KALPAGGSRYWCSV Trigger: GACAGAACACCAGTACCGGCTGCCTCCAGCAGGCAAGGCCTTCCAGGAGCTGGGCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | CACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATAATGGCTGGCCGGTTCTaGCGCACACCCCACAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HPWLPNAGYRHLLAPCQIMAGRF*RTPHSR Trigger: CCGACTGTGGGGTGTGCGCAAGAACCGGCCAGCCAT...TATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS TCA 90 bp | GGGTGGACTAGGACTCCATTCCTGCTTCTCAGGGCCCATTGCTCCTaGTGCTGCCTTCTCCGTCCCTGTTCGTGGTGCCACATCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWTRTPFLLLRAHCS*CCLLRPCSWCHIWE Trigger: TTCCCAGATGTGGCACCACGAACAGGGACGGAGAAGGCAGCATCAGGAGCAATGGGCCCTGAGAAGCAGGAATGGAGTCCTAGTCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS GCA 90 bp | TTCAGGACCTCGCCCACAACCATCGATTGCACCTGCTCTAGCGAGTaGTCATCCAACGTGCTCCCAGAGGCCTGGCTGTCAATGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FRTSPTTIDCTCSSE*SSNVLPEAWLSMTG Trigger: TCCCGTCATTGACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGTTGTGGGCGAGGTCCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGATGGCTGGCCGGTTCTaGCGCACACCCCACAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPRSVAVYLGPWVLGYQQMAGRF*RTPHSR Trigger: CCGACTGTGGGGTGTGCGCAAGAACCGGCCAGCCAT...CTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 90 bp | CAGGCCGTCTCAATATCTTTCAGGACCTCGCCCACAACCATCGATTaGACCTGCTCTAGCGAGTGCTCATCCAACGTGCTCCCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAVSISFRTSPTTID*TCSSECSSNVLPEA Trigger: GGCCTCTGGGAGCACGTTGGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGTTGTGGGCGAGGTCCTGAAAGATATTGAGACGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 90 bp | GCTGGAGGCAGCCGGTACTGGTGTTCTGTCCATAAAAGCCACTTCTaGACGTTACCAGGGCTCCAGTCCCCAGGGTCTGCTGTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGGSRYWCSVHKSHF*TLPGLQSPGSAVMF Trigger: GAACATCACAGCAGACCCTGGGGACTGGAGCCCTGGTAACGTGCAGAAGTGGCTTTTATGGACAGAACACCAGTACCGGCTGCCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 90 bp | GTCTCAATATCTTTCAGGACCTCGCCCACAACCATCGATTGCACCTaGTCTAGCGAGTGCTCATCCAACGTGCTCCCAGAGGCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSISFRTSPTTIDCT*SSECSSNVLPEAWL Trigger: CAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGTTGTGGGCGAGGTCCTGAAAGATATTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCACCCCTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGAAGATGCCTTTCTCCTaGTTGAGCCAGCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRAPLASQRRVQTSLSTMKMPFS*LSQRMK Trigger: CTTCATCCGCTGGCTCAACAAGGAGAAAGGCATCTT...CATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAGGGGTGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | AGTGAGCAGAGAGGACCAGGCCAACCAGAGAGTGGCTGCCTGGGGCAGGTTGTAGTGATGTTCAGAAGCTaGCAGGCCGTCTCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SEQRGPGQPESGCLGQVVVMFRS*QAVSIS Trigger: AGATATTGAGACGGCCTGCAAGCTTCTGAACATCAC...TACAACCTGCCCCAGGCAGCCACTCTCTGGTTGGCCTGGTCCTCTCTGCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTAATGCCTTTCTCCTTGTaGAGCCAGCGGATGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LASQRRVQTSLSTMPDMVMPFSL*SQRMKR Trigger: CCGCTTCATCCGCTGGCTCAACAAGGAGAAAGGCAT...TACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | TGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGATGCCTTTCTCCTTGTaGAGCCAGCGGATGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CIPRSVAVYLGPWVLGYQMPFSL*SQRMKR Trigger: CCGCTTCATCCGCTGGCTCAACAAGGAGAAAGGCAT...CTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGACACTGGAGGACCTAACAGTTATCTTACGTCTTTATTATCCATCCCCAATGGCTGGCCGGTTCTaGCGCACACCCCACAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQTLEDLTVILRLYYPSPMAGRF*RTPHSR Trigger: CCGACTGTGGGGTGTGCGCAAGAACCGGCCAGCCAT...TGGGGATGGATAATAAAGACGTAAGATAACTGTTAGGTCCTCCAGTGTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025054.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGTTCTGGGATACCAGCAGCGTGATGTTCAGAAGCTaGCAGGCCGTCTCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLDQWLSIWDLGFWDTSSVMFRS*QAVSIS Trigger: AGATATTGAGACGGCCTGCAAGCTTCTGAACATCAC...GCTGCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGAAGATGCCTTTCTCCTaGTTGAGCCAGCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRELMCIPRSVAVYLGPWKMPFS*LSQRMK Trigger: CTTCATCCGCTGGCTCAACAAGGAGAAAGGCATCTT...CCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAGCTCATGTGTATCCCTAGATCAGTGGCTGTCTATCTGGGACCTTGGGAAGATGCCTTTCTCCTaGTTGAGCCAGCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PESSCVSLDQWLSIWDLGKMPFS*LSQRMK Trigger: CTTCATCCGCTGGCTCAACAAGGAGAAAGGCATCTT...CCCAAGGTCCCAGATAGACAGCCACTGATCTAGGGATACACATGAGCTCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCCAACGCAGGGTACAGACATCTCTTAGCACCATGCCAGATATGGTACAGGTGATGTTCAGAAGCTaGCAGGCCGTCTCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: ASQRRVQTSLSTMPDMVQVMFRS*QAVSIS Trigger: AGATATTGAGACGGCCTGCAAGCTTCTGAACATCAC...CTGTACCATATCTGGCATGGTGCTAAGAGATGTCTGTACCCTGCGTTGGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025054.10 ENSMUST00000167489.2 |
||
| CDS TCA 90 bp | GCACAAATTGGTAGACAAGGCGCTGAGAGATGTCGGGTTTACGAATaGTGCCCTTCTTGTAATACTGGCGGATGGAGCGGCTTAGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AQIGRQGAERCRVYE*CPSCNTGGWSGLVY Trigger: ATAAACTAAGCCGCTCCATCCGCCAGTATTACAAGAAGGGCATCATTCGTAAACCCGACATCTCTCAGCGCCTTGTCTACCAATTTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 72 bp | GTGCTCCCAGAGGCCTGGCTGTCAATGACGGGACACTaGTCGGGCTCCTCCGGGTGGTCCTCCCCGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: VLPEAWLSMTGH*SGSSGWSSPAR Trigger: CCGTGCCGGGGAGGACCACCCGGAGGAGCCCGAGCAGTGTCCCGTCATTGACAGCCAGGCCTCTGGGAGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS CAA 72 bp | TCCGGGTGGTCCTCCCCGGCACGGGCCTCGGGGACTTaGGCGACCCAGCTGCTATCGTCGGGATACATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGWSSPARASGT*ATQLLSSGYML Trigger: TAACATGTATCCCGACGATAGCAGCTGGGTCGCCAAAGTCCCCGAGGCCCGTGCCGGGGAGGACCACCCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS CCA 72 bp | CCAAGGGTGCACGCTGACGGAACTGTTCCTCGGACATaGCGCACAGCTCCTTACCGCCCAGCTCCTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVHADGTVPRT*RTAPYRPAPGR Trigger: CCTTCCAGGAGCTGGGCGGTAAGGAGCTGTGCGCCATGTCCGAGGAACAGTTCCGTCAGCGTGCACCCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS TCA 72 bp | TGGGCATGCAGTACATCCCCACCCAAGGGTGCACGCTaGCGGAACTGTTCCTCGGACATGGCGCACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WACSTSPPKGAR*RNCSSDMAHSS Trigger: GGAGCTGTGCGCCATGTCCGAGGAACAGTTCCGTCAGCGTGCACCCTTGGGTGGGGATGTACTGCATGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS CCA 72 bp | TCTAGCGAGTGCTCATCCAACGTGCTCCCAGAGGCCTaGCTGTCAATGACGGGACACTGCTCGGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSECSSNVLPEA*LSMTGHCSGSS Trigger: GGAGGAGCCCGAGCAGTGTCCCGTCATTGACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACTCGCTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS GCA 72 bp | TGCTCAGGGGTGGCGGGTGGACTAGGACTCCATTCCTaGTTCTCAGGGCCCATTGCTCCTGATGCTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSGVAGGLGLHS*FSGPIAPDAAF Trigger: GAAGGCAGCATCAGGAGCAATGGGCCCTGAGAAGCAGGAATGGAGTCCTAGTCCACCCGCCACCCCTGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS TCA 72 bp | AGGACTCCATTCCTGCTTCTCAGGGCCCATTGCTCCTaGTGCTGCCTTCTCCGTCCCTGTTCGTGGTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTPFLLLRAHCS*CCLLRPCSWCH Trigger: GTGGCACCACGAACAGGGACGGAGAAGGCAGCATCAGGAGCAATGGGCCCTGAGAAGCAGGAATGGAGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS TCA 72 bp | GGCTTGAGCAGCAGTTCTTTCAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCACGACGAGTCCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLSSSSFRNCHR*MGCPEHDESTS Trigger: TGAGGTGGACTCGTCGTGCTCCGGGCAGCCCATTCACCTGTGGCAGTTCCTGAAAGAACTGCTGCTCAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 72 bp | TCGCCCACAACCATCGATTGCACCTGCTCTAGCGAGTaGTCATCCAACGTGCTCCCAGAGGCCTGGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPTTIDCTCSSE*SSNVLPEAWLS Trigger: TGACAGCCAGGCCTCTGGGAGCACGTTGGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGTTGTGGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||
| CDS GCA 72 bp | CTTCTGCACGTTACCAGGGCTCCAGTCCCCAGGGTCTaGTGTGATGTTCAGAAGCTTGCAGGCCGTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLHVTRAPVPRV*CDVQKLAGRLN Trigger: ATTGAGACGGCCTGCAAGCTTCTGAACATCACAGCAGACCCTGGGGACTGGAGCCCTGGTAACGTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS CAA 90 bp | TTACCAGGGCTCCAGTCCCCAGGGTCTGCTGTGATGTTCAGAAGCTaGCAGGCCGTCTCAATATCTTTCAGGACCTCGCCCACAACCATC | + |
|
Preference number: 6 (lower is better) Translates to: LPGLQSPGSAVMFRS*QAVSISFRTSPTTI Trigger: GATGGTTGTGGGCGAGGTCCTGAAAGATATTGAGACGGCCTGCAAGCTTCTGAACATCACAGCAGACCCTGGGGACTGGAGCCCTGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS CCA 72 bp | TCCTGGAAGGCCTTGCCTGCTGGAGGCAGCCGGTACTaGTGTTCTGTCCATAAAAGCCACTTCTGCACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SWKALPAGGSRY*CSVHKSHFCTL Trigger: TAACGTGCAGAAGTGGCTTTTATGGACAGAACACCAGTACCGGCTGCCTCCAGCAGGCAAGGCCTTCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS TCA 72 bp | GGTAGACAAGGCGCTGAGAGATGTCGGGTTTACGAATaGTGCCCTTCTTGTAATACTGGCGGATGGAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRQGAERCRVYE*CPSCNTGGWSG Trigger: GCCGCTCCATCCGCCAGTATTACAAGAAGGGCATCATTCGTAAACCCGACATCTCTCAGCGCCTTGTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000167489.2 |
||
| CDS GCA 72 bp | TCAATATCTTTCAGGACCTCGCCCACAACCATCGATTaGACCTGCTCTAGCGAGTGCTCATCCAACGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SISFRTSPTTID*TCSSECSSNVL Trigger: GAGCACGTTGGATGAGCACTCGCTAGAGCAGGTGCAATCGATGGTTGTGGGCGAGGTCCTGAAAGATATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025054.10 ENSMUST00000114870.9 ENSMUST00000138970.3 ENSMUST00000167489.2 |
||