Pregenerated sensors for SPCS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035227Ensembl transcript IDs: ENSMUST00000036274.8, ENSMUST00000207406.2, ENSMUST00000208465.2, ENSMUST00000208477.2, ENSMUST00000209032.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTaGGAAGTGCTGGGATTCTGGGTGAACACTACTGTGCCCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LYSPGWPHIIPPSSA*EVLGFWVNTTVPQQ Trigger: TTGCTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR TCA 90 bp | ACAGCAAGCATTTCACCCTCCCAGTCATCTCCCCAGCTCTGGCTTTaGGGCTGGCTGGCTAGGATGCTAGAGAGCACCCTGTACCCATGT | + |
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Preference number: 1 (lower is better) Translates to: TASISPSQSSPQLWL*GWLARMLESTLYPC Trigger: ACATGGGTACAGGGTGCTCTCTAGCATCCTAGCCAGCCAGCCTCAAAGCCAGAGCTGGGGAGATGACTGGGAGGGTGAAATGCTTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR GCA 90 bp | GCATGGCTTCTATGTGGGTTCTGGGGATCCAAACTCAGACGCCGCTaGTTACACAGCAAGCATTTCACCCTCCCAGTCATCTCCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: AWLLCGFWGSKLRRR*LHSKHFTLPVISPA Trigger: AGCTGGGGAGATGACTGGGAGGGTGAAATGCTTGCTGTGTAAGCAGCGGCGTCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | AAAGTCAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTaGCTCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KVSNKLTMPTPQARA*LYSPGWPHIIPPSS Trigger: TGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR GCA 90 bp | CACCTGTGGAGGCCAGCGGCTGACAGTACAGGTCTTCCATTTCTATaGAGCCTGACTTCTGAGACCAGGGCTTTTACTGCACCAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: HLWRPAADSTGLPFL*SLTSETRAFTAPEL Trigger: AAGCTCTGGTGCAGTAAAAGCCCTGGTCTCAGAAGTCAGGCTGCATAGAAATGGAAGACCTGTACTGTCAGCCGCTGGCCTCCACAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR GCA 90 bp | TTAGGACTGTTGTGGGTGAGCTTCAGCGAGCCAATGCATGTGATGTaGCCAGTGTCACTGCTATCACTAGAACTAAGCCCCTGGCTCCGA | + |
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Preference number: 1 (lower is better) Translates to: LGLLWVSFSEPMHVM*PVSLLSLELSPWLR Trigger: TCGGAGCCAGGGGCTTAGTTCTAGTGATAGCAGTGACACTGGGCACATCACATGCATTGGCTCGCTGAAGCTCACCCACAACAGTCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | CATGTGATGTGCCCAGTGTCACTGCTATCACTAGAACTAAGCCCCTaGCTCCGAATTCTCAAGGGCCCACAAACAGTGAGCCAGCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: HVMCPVSLLSLELSP*LRILKGPQTVSQPR Trigger: TCTAGGCTGGCTCACTGTTTGTGGGCCCTTGAGAATTCGGAGCCAGGGGCTTAGTTCTAGTGATAGCAGTGACACTGGGCACATCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR TCA 90 bp | GGAGGCCAGCGGCTGACAGTACAGGTCTTCCATTTCTATGCAGCCTaGCTTCTGAGACCAGGGCTTTTACTGCACCAGAGCTTGCTAATT | + |
|
Preference number: 1 (lower is better) Translates to: GGQRLTVQVFHFYAA*LLRPGLLLHQSLLI Trigger: AATTAGCAAGCTCTGGTGCAGTAAAAGCCCTGGTCTCAGAAGTCAGGCTGCATAGAAATGGAAGACCTGTACTGTCAGCCGCTGGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR GCA 90 bp | TGCCTTGATTTGTTCCCTAGCACAAGGGTTAGATGTGCTTCACCATaGATGGCTTCTATGTGGGTTCTGGGGATCCAAACTCAGACGCCG | + |
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Preference number: 1 (lower is better) Translates to: CLDLFPSTRVRCASP*MASMWVLGIQTQTP Trigger: CGGCGTCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGCATGGTGAAGCACATCTAACCCTTGTGCTAGGGAACAAATCAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | TTGATTTGTTCCCTAGCACAAGGGTTAGATGTGCTTCACCATGCATaGCTTCTATGTGGGTTCTGGGGATCCAAACTCAGACGCCGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LICSLAQGLDVLHHA*LLCGFWGSKLRRRC Trigger: GCAGCGGCGTCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGCATGGTGAAGCACATCTAACCCTTGTGCTAGGGAACAAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | CATCAAACCCAGAGAGGAAAACTAGGGGAAGAGCAGGCAGAACAATaGGGAACAGAGGTGACCTTTGGACATGTTAACCCTGAGATGCCC | + |
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Preference number: 1 (lower is better) Translates to: HQTQRGKLGEEQAEQ*GTEVTFGHVNPEMP Trigger: GGGCATCTCAGGGTTAACATGTCCAAAGGTCACCTCTGTTCCCCATTGTTCTGCCTGCTCTTCCCCTAGTTTTCCTCTCTGGGTTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
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| 3UTR CCA 90 bp | AGGCTTATAGGCTTACAGAATCCAAGCCTTCAACATCTGGCAGTGTaGTCTCACTGTGTAGTGCTAGACAGGACAACATTCTGGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: RLIGLQNPSLQHLAV*SHCVVLDRTTFWML Trigger: GAGCATCCAGAATGTTGTCCTGTCTAGCACTACACAGTGAGACCACACTGCCAGATGTTGAAGGCTTGGATTCTGTAAGCCTATAAGCCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | CTGGCAGTGTGGTCTCACTGTGTAGTGCTAGACAGGACAACATTCTaGATGCTCTCTGGATGCTTTCATATAGGGAATATAATTTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LAVWSHCVVLDRTTF*MLSGCFHIGNIIWG Trigger: ACCCCAAATTATATTCCCTATATGAAAGCATCCAGAGAGCATCCAGAATGTTGTCCTGTCTAGCACTACACAGTGAGACCACACTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR GCA 90 bp | CACTGTGTAGTGCTAGACAGGACAACATTCTGGATGCTCTCTGGATaGTTTCATATAGGGAATATAATTTGGGGTACTAGACTTAGAATT | + |
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Preference number: 1 (lower is better) Translates to: HCVVLDRTTFWMLSG*FHIGNIIWGTRLRI Trigger: AATTCTAAGTCTAGTACCCCAAATTATATTCCCTATATGAAAGCATCCAGAGAGCATCCAGAATGTTGTCCTGTCTAGCACTACACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CCA 90 bp | ACATTCTGGATGCTCTCTGGATGCTTTCATATAGGGAATATAATTTaGGGTACTAGACTTAGAATTAGACTCCTCAAACTGCCCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TFWMLSGCFHIGNII*GTRLRIRLLKLPSS Trigger: AGAACTGGGCAGTTTGAGGAGTCTAATTCTAAGTCTAGTACCCCAAATTATATTCCCTATATGAAAGCATCCAGAGAGCATCCAGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTaGGAAGTGCTGGGATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PTPQARAWLYSPGWPHIIPPSSA*EVLGFW Trigger: CCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGG...AATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR CCA 90 bp | AATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATCCCCCTTCCTCAGCCTaGGAAGTGCTGGGATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NAHSPSQGLALQPRMASHPPSSA*EVLGFW Trigger: CCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGG...ATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCCCCCAAGCCAGGGCCTaGCTCTACAGCCCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: QQQVNNAHSPSQGLALQPPQARA*LYSPGW Trigger: CCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGG...GGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | TCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTGGGAAGTGCTGCTGGGATTCTGGGTaGACACTACTGTGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: STAQDGLTSFPLPQPGKCCWDSG*TLLCPS Trigger: GCTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCA...GCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCTGGCTTCGCTTCACATGCATTCTCAAGGCCAAACTAGGGATCCCATGCCCCCAAGCCAGGGCCTaGCTCTACAGCCCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: SSWLRFTCILKAKLGIPCPQARA*LYSPGW Trigger: CCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGG...GCATGGGATCCCTAGTTTGGCCTTGAGAATGCATGTGAAGCGAAGCCAGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAAGCATTTCACCCTCCCAGTCATCTCCCCAGCTCTGGCTTTGAGGCTGCAGCACTGTATTAAGTaGGCCACCTTCTCAGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSKHFTLPVISPALALRLQHCIK*ATFSAL Trigger: CAGCGCTGAGAAGGTGGCTCACTTAATACAGTGCTG...CAGCCTCAAAGCCAGAGCTGGGGAGATGACTGGGAGGGTGAAATGCTTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTGGGAAGAGCAGGCAGAACAATaGGGAACAGAGGTGACCTTT | + |
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Preference number: 2 (lower is better) Translates to: WLYSPGWPHIIPPSSAWEEQAEQ*GTEVTF Trigger: AAAGGTCACCTCTGTTCCCCATTGTTCTGCCTGCTC...TTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATGTAGTTCTTAAGAACTaGGCATTCAAACGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: NAHSPSQGLALQPRMASHVVLKN*AFKRCM Trigger: CATGCAGCGTTTGAATGCTCAGTTCTTAAGAACTAC...ATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACACAAAGTCAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGTGCTGGGATTCTGGGTaGACACTACTGTGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: STQSQQQVNNAHSPSQGLCWDSG*TLLCPS Trigger: GCTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCA...CAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTGACTTTGTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTGAACACTACTGTGCCCCAGAATGGGGAACAGAGGTaGCCTTTGGACATGTTAACC | + |
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Preference number: 2 (lower is better) Translates to: PSSAWEVLGFWVNTTVPQNGEQR*PLDMLT Trigger: GGTTAACATGTCCAAAGGTCACCTCTGTTCCCCATT...CTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
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| 3UTR CAA 90 bp | TTCAGCCAGACTGGCTGCCAGCAAGACCCTAGCCTCTGCCTTGATTaGTTCCCTAGCACAAGGGTTAGATGTGCTTCACCATGCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSQTGCQQDPSLCLD*FPSTRVRCASPCMA Trigger: AGCCATGCATGGTGAAGCACATCTAACCCTTGTGCTAGGGAACAAATCAAGGCAGAGGCTAGGGTCTTGCTGGCAGCCAGTCTGGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR CCA 90 bp | TTACACAGCAAGCATTTCACCCTCCCAGTCATCTCCCCAGCTCTGGCTTTGAGGGAAGTGCTGGGATTCTaGGTGAACACTACTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LHSKHFTLPVISPALALREVLGF*VNTTVP Trigger: GGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTC...CCTCAAAGCCAGAGCTGGGGAGATGACTGGGAGGGTGAAATGCTTGCTGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR CCA 90 bp | TCAACACAAAGTCAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGGAAGTGCTGGGATTCTaGGTGAACACTACTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: STQSQQQVNNAHSPSQGLEVLGF*VNTTVP Trigger: GGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTC...CAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTGACTTTGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTGAACACTACTGTGCCCCAGGGACAACTGCATATCTaGACTAGAAAACTCTATTCA | + |
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Preference number: 2 (lower is better) Translates to: PSSAWEVLGFWVNTTVPQGQLHI*TRKLYS Trigger: TGAATAGAGTTTTCTAGTTCAGATATGCAGTTGTCC...CTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCTACAGCCCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTGGGAAGGACAACTGCATATCTaGACTAGAAAACTCTATTCA | + |
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Preference number: 2 (lower is better) Translates to: WLYSPGWPHIIPPSSAWEGQLHI*TRKLYS Trigger: TGAATAGAGTTTTCTAGTTCAGATATGCAGTTGTCC...TTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAAGTTGTATCCTGGATTTAAGGAAATAGTTGCTGATGCAGGGGTCAACCCCCCTTCCTCAGCCTaGGAAGTGCTGGGATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LNKLYPGFKEIVADAGVNPPSSA*EVLGFW Trigger: CCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGG...GTTGACCCCTGCATCAGCAACTATTTCCTTAAATCCAGGATACAACTTGTTAAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGGCAGTGTGGTCTCACTGTGTAGTGCTAGACAGGACAACATTCTGGATAGCACGTGCTGTGTGTaGTGTTCCTTCTTTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TSGSVVSLCSARQDNILDSTCCV*CSFFQD Trigger: GTCTTGAAAGAAGGAACAGCACACACAGCACGTGCT...ATCCAGAATGTTGTCCTGTCTAGCACTACACAGTGAGACCACACTGCCAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR GCA 90 bp | ATCATTCCCCCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTGAACACTACTCATCAAAGGGACAACTaGATATCTGAACTAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: IIPPSSAWEVLGFWVNTTHQRDN*ISELEN Trigger: GTTTTCTAGTTCAGATATGCAGTTGTCCCTTTGATG...AGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTATCCTGGATTTAAGGAAATAGTTGCTGATGCAGGGGTCAACACAAAGTCACTCTACAGCCCAGGATaGCCTCACATCATTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LYPGFKEIVADAGVNTKSLYSPG*PHIIPP Trigger: AGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAG...TGACTTTGTGTTGACCCCTGCATCAGCAACTATTTCCTTAAATCCAGGATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR GCA 90 bp | TCAACACAAAGTCAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGCATCAAAGGGACAACTaGATATCTGAACTAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: STQSQQQVNNAHSPSQGLHQRDN*ISELEN Trigger: GTTTTCTAGTTCAGATATGCAGTTGTCCCTTTGATG...CAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTGACTTTGTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTGTTCCTTCTTTCAAGACTCCACATTTTCACATCTTCTTTCATTTATTGTGCTGGGATTCTGGGTaGACACTACTGTGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CAVPSFKTPHFHIFFHLLCWDSG*TLLCPS Trigger: GCTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCA...CAATAAATGAAAGAAGATGTGAAAATGTGGAGTCTTGAAAGAAGGAACAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR CAA 90 bp | AGACTTAGAATTAGACTCCTCAAACTGCCCAGTTCTCTGACCAAGTaGAGAAATTTGTCTCTGAAGGAACATAACATCTGGTGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RLRIRLLKLPSSLTK*RNLSLKEHNIWWPV Trigger: GACAGGCCACCAGATGTTATGTTCCTTCAGAGACAAATTTCTCAACTTGGTCAGAGAACTGGGCAGTTTGAGGAGTCTAATTCTAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTACAGCCATCAAAGGGACAACTGCATATCTGAACTAGAAAACTCTATTCATGTAGTTCTTAAGAACTaGGCATTCAAACGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: GYSHQRDNCISELENSIHVVLKN*AFKRCM Trigger: CATGCAGCGTTTGAATGCTCAGTTCTTAAGAACTAC...ATGAATAGAGTTTTCTAGTTCAGATATGCAGTTGTCCCTTTGATGGCTGTAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTATCCTGGATTTAAGGAAATAGTTGCTGATGCAGGGGTCAACACAAAGTCAGTAGTTCTTAAGAACTaGGCATTCAAACGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: LYPGFKEIVADAGVNTKSVVLKN*AFKRCM Trigger: CATGCAGCGTTTGAATGCTCAGTTCTTAAGAACTAC...TGACTTTGTGTTGACCCCTGCATCAGCAACTATTTCCTTAAATCCAGGATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR-3UTR GCA 90 bp | TATCCTGGATTTAAGGAAATAGTTGCTGATGCAGGGGTCAACACAAAGTCAGCACATCAAAGGGACAACTaGATATCTGAACTAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: YPGFKEIVADAGVNTKSAHQRDN*ISELEN Trigger: GTTTTCTAGTTCAGATATGCAGTTGTCCCTTTGATG...TGCTGACTTTGTGTTGACCCCTGCATCAGCAACTATTTCCTTAAATCCAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR CCA 72 bp | ACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATaGCCTCACATCATTCCCCCTTCCTCAGCCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TPQARAWLYSPG*PHIIPPSSAWE Trigger: TTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR CCA 72 bp | CCAGGATGGCCTCACATCATTCCCCCTTCCTCAGCCTaGGAAGTGCTGGGATTCTGGGTGAACACTACTGTG | + |
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Preference number: 3 (lower is better) Translates to: PGWPHIIPPSSA*EVLGFWVNTTV Trigger: CACAGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
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| 3UTR CCA 72 bp | AACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTaGCTCTACAGCCCAGGATGGCCTCACATCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NKLTMPTPQARA*LYSPGWPHIIP Trigger: GGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR TCA 72 bp | CCCCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTaGACACTACTGTGCCCCAGCAAGGTTAGTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLPQPGKCWDSG*TLLCPSKVSSS Trigger: AGAACTACTAACCTTGCTGGGGCACAGTAGTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR GCA 72 bp | CTATGTGGGTTCTGGGGATCCAAACTCAGACGCCGCTaGTTACACAGCAAGCATTTCACCCTCCCAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LCGFWGSKLRRR*LHSKHFTLPVI Trigger: GATGACTGGGAGGGTGAAATGCTTGCTGTGTAAGCAGCGGCGTCTGAGTTTGGATCCCCAGAACCCACATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | TGCCCAGTGTCACTGCTATCACTAGAACTAAGCCCCTaGCTCCGAATTCTCAAGGGCCCACAAACAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CPVSLLSLELSP*LRILKGPQTVS Trigger: GCTCACTGTTTGTGGGCCCTTGAGAATTCGGAGCCAGGGGCTTAGTTCTAGTGATAGCAGTGACACTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | GATGTGCTTCACCATGCATGGCTTCTATGTGGGTTCTaGGGATCCAAACTCAGACGCCGCTGCTTACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: DVLHHAWLLCGF*GSKLRRRCLHS Trigger: GCTGTGTAAGCAGCGGCGTCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGCATGGTGAAGCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGTGGGTCACTGAACTTGAACCTTTACCCTGTGTGTACGTGCCTGTGTGCCCCTGCCTTAGGACTGTaGTGGGTGAGCTTCAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSGSLNLNLYPVCTCLCAPALGL*WVSFSE Trigger: CTCGCTGAAGCTCACCCACAACAGTCCTAAGGCAGG...GGCACACAGGCACGTACACACAGGGTAAAGGTTCAAGTTCAGTGACCCACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR TCA 72 bp | CGGCTGACAGTACAGGTCTTCCATTTCTATGCAGCCTaGCTTCTGAGACCAGGGCTTTTACTGCACCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLTVQVFHFYAA*LLRPGLLLHQS Trigger: GCTCTGGTGCAGTAAAAGCCCTGGTCTCAGAAGTCAGGCTGCATAGAAATGGAAGACCTGTACTGTCAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR GCA 72 bp | TTGTGGGTGAGCTTCAGCGAGCCAATGCATGTGATGTaGCCAGTGTCACTGCTATCACTAGAACTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LWVSFSEPMHVM*PVSLLSLELSP Trigger: GGGGCTTAGTTCTAGTGATAGCAGTGACACTGGGCACATCACATGCATTGGCTCGCTGAAGCTCACCCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR GCA 72 bp | ACCAGCACTGTATTAAGTGAGCCACCTTCTCAGCGCTaGACTGTTGCTTTTACAAGAAAGGGTGGGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSTVLSEPPSQR*TVAFTRKGGGS Trigger: GCTGCCCCCACCCTTTCTTGTAAAAGCAACAGTGCAGCGCTGAGAAGGTGGCTCACTTAATACAGTGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | AGGGTTAGATGTGCTTCACCATGCATGGCTTCTATGTaGGTTCTGGGGATCCAAACTCAGACGCCGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVRCASPCMASM*VLGIQTQTPLL Trigger: AAGCAGCGGCGTCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGCATGGTGAAGCACATCTAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR TCA 72 bp | AGGGATCCCATGCTTGCACACCAGCACTGTATTAAGTaGGCCACCTTCTCAGCGCTGCACTGTTGCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RDPMLAHQHCIK*ATFSALHCCFY Trigger: GTAAAAGCAACAGTGCAGCGCTGAGAAGGTGGCTCACTTAATACAGTGCTGGTGTGCAAGCATGGGATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCGTCACACTTAACAAGTaGTATCCTGGATTTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QQQVNNAHSPSQGLALQPVTLNK*YPGFKE Trigger: TTCCTTAAATCCAGGATACAACTTGTTAAGTGTGAC...GGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR CCA 72 bp | TCCCTAGCACAAGGGTTAGATGTGCTTCACCATGCATaGCTTCTATGTGGGTTCTGGGGATCCAAACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLAQGLDVLHHA*LLCGFWGSKLR Trigger: TCTGAGTTTGGATCCCCAGAACCCACATAGAAGCCATGCATGGTGAAGCACATCTAACCCTTGTGCTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | CAGAGAGGAAAACTAGGGGAAGAGCAGGCAGAACAATaGGGAACAGAGGTGACCTTTGGACATGTTAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGKLGEEQAEQ*GTEVTFGHVNP Trigger: AGGGTTAACATGTCCAAAGGTCACCTCTGTTCCCCATTGTTCTGCCTGCTCTTCCCCTAGTTTTCCTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
||
| 3UTR GCA 72 bp | TTCACATGCATTCTCAAGGCCAAACTAGGGATCCCATaGTTGCACACCAGCACTGTATTAAGTGAGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: FTCILKAKLGIP*LHTSTVLSEPP Trigger: AGGTGGCTCACTTAATACAGTGCTGGTGTGCAAGCATGGGATCCCTAGTTTGGCCTTGAGAATGCATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCTGGCTTCGCTTCACATGCATTCTCAAGGCCAAACTAGGGATCCCATGCAGTTCTCTGACCAAGTaGAGAAATTTGTCTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSWLRFTCILKAKLGIPCSSLTK*RNLSLK Trigger: CTTCAGAGACAAATTTCTCAACTTGGTCAGAGAACT...GCATGGGATCCCTAGTTTGGCCTTGAGAATGCATGTGAAGCGAAGCCAGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | TGGTCTCACTGTGTAGTGCTAGACAGGACAACATTCTaGATGCTCTCTGGATGCTTTCATATAGGGAATATA | + |
|
Preference number: 3 (lower is better) Translates to: WSHCVVLDRTTF*MLSGCFHIGNI Trigger: TATATTCCCTATATGAAAGCATCCAGAGAGCATCCAGAATGTTGTCCTGTCTAGCACTACACAGTGAGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CCA 72 bp | ATGCTCTCTGGATGCTTTCATATAGGGAATATAATTTaGGGTACTAGACTTAGAATTAGACTCCTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: MLSGCFHIGNII*GTRLRIRLLKL Trigger: CAGTTTGAGGAGTCTAATTCTAAGTCTAGTACCCCAAATTATATTCCCTATATGAAAGCATCCAGAGAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATGCTTGTCCCGCAGCTaGGGCCGCCGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCPLPKPGPGSTAQDGLTCLSRS*GRRQPH Trigger: GTGGGGCTGGCGGCGGCCCCAGCTGCGGGACAAGCA...TGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR TCA 90 bp | CCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATCATTCTACAGGCGCAGAACTaGCACCCTCCTCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPQARAWLYSPGWPHIILQAQN*HPPPGP Trigger: TGGGCCTGGAGGAGGGTGTCAGTTCTGCGCCTGTAG...AATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209032.2 |
||
| CDS-3UTR CCA 90 bp | TCACATCATTCCCCCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTGAACACTGCTTGTCCCGCAGCTaGGGCCGCCGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHHSPFLSLGSAGILGEHCLSRS*GRRQPH Trigger: GTGGGGCTGGCGGCGGCCCCAGCTGCGGGACAAGCA...GTGTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR TCA 90 bp | CAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACACGAGAAAAGGTCTTTTaGGGCTGGAGGACAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCPLPKPGPGSTAQDGLTREKVF*GWRTAA Trigger: GGCAGCTGTCCTCCAGCCTCAAAAGACCTTTTCTCG...TGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATCATTTATCCAACAAACCACTaGGGCTGCTGCTTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPQARAWLYSPGWPHIIYPTNH*GCCLSR Trigger: GCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATA...AATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACATCATTCCCCCTTCCTCAGCCTGGGAAGTGCTGGGATTCTGGGTGAACTATCCAACAAACCACTaGGGCTGCTGCTTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHIIPPSSAWEVLGFWVNYPTNH*GCCLSR Trigger: GCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATA...GTTCACCCAGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCATATCTGAACTAGAAAACTCTATTCATCCAGGGTGGATTAGACAGGGGTGCTTGTCCCGCAGCTaGGGCCGCCGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NCISELENSIHPGWIRQGCLSRS*GRRQPH Trigger: GTGGGGCTGGCGGCGGCCCCAGCTGCGGGACAAGCA...CCCCTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTTCAGATATGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR CAA 72 bp | ACTGGCTGCCAGCAAGACCCTAGCCTCTGCCTTGATTaGTTCCCTAGCACAAGGGTTAGATGTGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCQQDPSLCLD*FPSTRVRCASP Trigger: TGGTGAAGCACATCTAACCCTTGTGCTAGGGAACAAATCAAGGCAGAGGCTAGGGTCTTGCTGGCAGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTGGCAGTGTGGTCTCACTGTGTAGTGCTAGACAGGACAACATTCTGGATTATCCAACAAACCACTaGGGCTGCTGCTTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGSVVSLCSARQDNILDYPTNH*GCCLSR Trigger: GCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATA...ATCCAGAATGTTGTCCTGTCTAGCACTACACAGTGAGACCACACTGCCAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR CCA 90 bp | CACAAAGGAAAAATATGCTTAGCTCTTACAAAAACGCTTAAGGAAAGCAACAGATGCTTGTCCCGCAGCTaGGGCCGCCGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKGKICLALTKTLKESNRCLSRS*GRRQPH Trigger: GTGGGGCTGGCGGCGGCCCCAGCTGCGGGACAAGCA...TCTGTTGCTTTCCTTAAGCGTTTTTGTAAGAGCTAAGCATATTTTTCCTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR CAA 72 bp | ACATGCATTCTCAAGGCCAAACTAGGGATCCCATGCTaGCACACCAGCACTGTATTAAGTGAGCCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCILKAKLGIPC*HTSTVLSEPPS Trigger: AGAAGGTGGCTCACTTAATACAGTGCTGGTGTGCAAGCATGGGATCCCTAGTTTGGCCTTGAGAATGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR GCA 90 bp | AACTGCATATCTGAACTAGAAAACTCTATTCATCCAGGGTGGATTAGACAGGGGTATCCAACAAACCACTaGGGCTGCTGCTTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NCISELENSIHPGWIRQGYPTNH*GCCLSR Trigger: GCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATA...CCCCTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTTCAGATATGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CCA 90 bp | GGCTACAGCCATCAAAGGGACAACTGCATATCTGAACTAGAAAACTCTATTCATGTGGGGTCTTTTCTGTaGGCCACAAGGAAGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSHQRDNCISELENSIHVGSFL*ATRKML Trigger: GAGCATCTTCCTTGTGGCCCACAGAAAAGACCCCAC...ATGAATAGAGTTTTCTAGTTCAGATATGCAGTTGTCCCTTTGATGGCTGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| 3UTR CAA 72 bp | CTCAAACTGCCCAGTTCTCTGACCAAGTTGAGAAATTaGTCTCTGAAGGAACATAACATCTGGTGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKLPSSLTKLRN*SLKEHNIWWPV Trigger: GACAGGCCACCAGATGTTATGTTCCTTCAGAGACAAATTTCTCAACTTGGTCAGAGAACTGGGCAGTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| 3UTR CAA 72 bp | CAAACACTTTCAAAACCTTTAAGTGGGTCACTGAACTaGAACCTTTACCCTGTGTGTACGTGCCTGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLSKPLSGSLN*NLYPVCTCLCA Trigger: GGCACACAGGCACGTACACACAGGGTAAAGGTTCAAGTTCAGTGACCCACTTAAAGGTTTTGAAAGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR GCA 90 bp | CACAAAGGAAAAATATGCTTAGCTCTTACAAAAACGCTTAAGGAAAGCAACAGATATCCAACAAACCACTaGGGCTGCTGCTTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HKGKICLALTKTLKESNRYPTNH*GCCLSR Trigger: GCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATA...TCTGTTGCTTTCCTTAAGCGTTTTTGTAAGAGCTAAGCATATTTTTCCTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTATTCATCCAGGGTGGATTAGACAGGGGCATCTTTAACATTTCTTACTTGCTCTCACATGGACAGTaGAAGTCTCCATGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLFIQGGLDRGIFNISYLLSHGQ*KSPCRK Trigger: TTTTCTGCATGGAGACTTGCACTGTCCATGTGAGAG...CAAGTAAGAAATGTTAAAGATGCCCCTGTCTAATCCACCCTGGATGAATAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208477.2 |
||
| 3UTR CAA 72 bp | ATTAGACTCCTCAAACTGCCCAGTTCTCTGACCAAGTaGAGAAATTTGTCTCTGAAGGAACATAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRLLKLPSSLTK*RNLSLKEHNIW Trigger: CCAGATGTTATGTTCCTTCAGAGACAAATTTCTCAACTTGGTCAGAGAACTGGGCAGTTTGAGGAGTCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036274.8 |
||
| CDS-3UTR GCA 90 bp | TTGTATCCTGGATTTAAGGAAATAGTTGCTGATGCAGGGGTCAACACAAAGTCACAGTGCAAGTCTCCATaGAGAAAACTCAAATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYPGFKEIVADAGVNTKSQCKSP*RKLKSL Trigger: TAAGGATTTGAGTTTTCTGCATGGAGACTTGCACTG...TGACTTTGTGTTGACCCCTGCATCAGCAACTATTTCCTTAAATCCAGGATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208477.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGATGGCCTCACATCACACTGCGGCTGCTGCTaGTCCCGCAGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CPLPKPGPGSTAQDGLTSHCGCC*SRSWGR Trigger: GCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTG...TGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCCACTGCGGCTGCTGCTaGTCCCGCAGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QQQVNNAHSPSQGLALQPHCGCC*SRSWGR Trigger: GCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTG...GGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CAA 90 bp | CAACAAGTTAACAATGCCCACTCCCCAAGCCAGGGCCTGGCTCTACAGCCCAGGCACTGCGGCTGCTGCTaGTCCCGCAGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QQVNNAHSPSQGLALQPRHCGCC*SRSWGR Trigger: GCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTG...CCTGGGCTGTAGAGCCAGGCCCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CAA 90 bp | AACTGCATATCTGAACTAGAAAACTCTATTCATCCAGGGTGGATTAGACAGGGGCACTGCGGCTGCTGCTaGTCCCGCAGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NCISELENSIHPGWIRQGHCGCC*SRSWGR Trigger: GCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTG...CCCCTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTTCAGATATGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CAA 90 bp | GACAACTGCATATCTGAACTAGAAAACTCTATTCATCCAGGGTGGATTAGACAGCACTGCGGCTGCTGCTaGTCCCGCAGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DNCISELENSIHPGWIRQHCGCC*SRSWGR Trigger: GCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTG...CTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTTCAGATATGCAGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000036274.8 ENSMUST00000207406.2 ENSMUST00000208465.2 ENSMUST00000208477.2 ENSMUST00000209032.2 |
||
| CDS-3UTR CAA 90 bp | AACTGCATATCTGAACTAGAAAACTCTATTCATCCAGGGTGGATTAGACAGGGGCCGAGAAAAGGTCTTTaGAGGCTGGAGGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NCISELENSIHPGWIRQGPRKGL*RLEDSC Trigger: GCAGCTGTCCTCCAGCCTCAAAAGACCTTTTCTCGG...CCCCTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTTCAGATATGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207406.2 |
||
| CDS GCA 90 bp | TTAAGCACTACACTCAGACGCGTGTATGGACTCTCACATGGACAGTaGAAGTCTCCATGCAGAAAACTCAAATCCTTATCCAACAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTTLRRVYGLSHGQ*KSPCRKLKSLSNKP Trigger: TGGTTTGTTGGATAAGGATTTGAGTTTTCTGCATGGAGACTTGCACTGTCCATGTGAGAGTCCATACACGCGTCTGAGTGTAGTGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208477.2 |
||
| CDS TCA 72 bp | ACATCCTCACAGCAAGGGAAACTACAGGCGCAGAACTaGCACCCTCCTCCAGGCCCAAAGGCTTATCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: TSSQQGKLQAQN*HPPPGPKAYPT Trigger: TGTTGGATAAGCCTTTGGGCCTGGAGGAGGGTGTCAGTTCTGCGCCTGTAGTTTCCCTTGCTGTGAGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209032.2 |
||
| CDS GCA 72 bp | ACACTCAGACGCGTGTATGGACTCTCACATGGACAGTaGAAGTCTCCATGCAGAAAACTCAAATCCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: TLRRVYGLSHGQ*KSPCRKLKSLS Trigger: GGATAAGGATTTGAGTTTTCTGCATGGAGACTTGCACTGTCCATGTGAGAGTCCATACACGCGTCTGAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208477.2 |
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| CDS GCA 72 bp | GTGTATGGACTCTCACATGGACAGTGCAAGTCTCCATaGAGAAAACTCAAATCCTTATCCAACAAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: VYGLSHGQCKSP*RKLKSLSNKPL Trigger: CAGTGGTTTGTTGGATAAGGATTTGAGTTTTCTGCATGGAGACTTGCACTGTCCATGTGAGAGTCCATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208477.2 |
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