Pregenerated sensors for SPATS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051934Ensembl transcript IDs: ENSMUST00000063517.6, ENSMUST00000229066.2, ENSMUST00000229073.2, ENSMUST00000229147.2, ENSMUST00000229663.2, ENSMUST00000230628.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGACACTCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTaGGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACTGGC | + |
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Preference number: 1 (lower is better) Translates to: ADTLPPGASAVSSWR*GALGRRLLTFGKTG Trigger: GCCAGTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGAGTGTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR GCA 90 bp | TGGACTGGAGACTGGACTAGCAGACACTCTTCCTCCCGGAGCCTCTaGGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: WTGDWTSRHSSSRSL*GKQLEVRCAGKEAA Trigger: AGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGAGTGTCTGCTAGTCCAGTCTCCAGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CCA 90 bp | TTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTaGCATCTGCTCGAATGGACTGGAGACTGGACTAGCAGACACTCT | + |
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Preference number: 1 (lower is better) Translates to: FYSRSGNWWEPGRHL*HLLEWTGDWTSRHS Trigger: AGAGTGTCTGCTAGTCCAGTCTCCAGTCCATTCGAGCAGATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR TCA 90 bp | TGCAGGTTAAGGTACGGTGCCAAGTGTGGGATGGAAACCCTGACTTaGTGTCAGACCTCAGGCACATTCCAGACAGAGGGCGTTCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: CRLRYGAKCGMETLT*CQTSGTFQTEGVPR Trigger: CCGGGGAACGCCCTCTGTCTGGAATGTGCCTGAGGTCTGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR GCA 90 bp | AACAAGGCTTTGGGCATTTGGAAGAAACTGCAGGTTAAGGTACGGTaGCAAGTGTGGGATGGAAACCCTGACTTGATGTCAGACCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: NKALGIWKKLQVKVR*QVWDGNPDLMSDLR Trigger: CCTGAGGTCTGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCAGTTTCTTCCAAATGCCCAAAGCCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CCA 90 bp | TTGGGCATTTGGAAGAAACTGCAGGTTAAGGTACGGTGCCAAGTGTaGGATGGAAACCCTGACTTGATGTCAGACCTCAGGCACATTCCA | + |
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Preference number: 1 (lower is better) Translates to: LGIWKKLQVKVRCQV*DGNPDLMSDLRHIP Trigger: TGGAATGTGCCTGAGGTCTGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCAGTTTCTTCCAAATGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR-3UTR TCA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTCCCCTGGTTCCTGGTaGAAACGACCAACCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLSPGSW*KRPTRV Trigger: GACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGA...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CAA 90 bp | CTGCAGGTTAAGGTACGGTGCCAAGTGTGGGATGGAAACCCTGACTaGATGTCAGACCTCAGGCACATTCCAGACAGAGGGCGTTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: LQVKVRCQVWDGNPD*MSDLRHIPDRGRSP Trigger: CGGGGAACGCCCTCTGTCTGGAATGTGCCTGAGGTCTGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAGTTATTAGGTTGAACTaGATGGGAGAGAAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FPWFLVKTTNQSQSISLGVIRLN*MGEKRG Trigger: GCCTCTCTTCTCTCCCATCCAGTTCAACCTAATAAC...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR TCA 72 bp | CTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTaGGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LPPGASAVSSWR*GALGRRLLTFG Trigger: CCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGAGTCCAGTTATTAGGTaGAACTGGATGGGAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKSPVIR*NWMGEK Trigger: CTTCTCTCCCATCCAGTTCAACCTAATAACTGGACT...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CCA 72 bp | TGGAAGAAACTGCAGGTTAAGGTACGGTGCCAAGTGTaGGATGGAAACCCTGACTTGATGTCAGACCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: WKKLQVKVRCQV*DGNPDLMSDLR Trigger: CCTGAGGTCTGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCAGTTTCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR GCA 72 bp | TTGGGCATTTGGAAGAAACTGCAGGTTAAGGTACGGTaGCAAGTGTGGGATGGAAACCCTGACTTGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: LGIWKKLQVKVR*QVWDGNPDLMS Trigger: TGACATCAAGTCAGGGTTTCCATCCCACACTTGGCACCGTACCTTAACCTGCAGTTTCTTCCAAATGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTATTCACTTATAAAGATGACCGCAACAACGGTGCCGAGTAACACCTTAGGAGGCTGCTCACCTTaGGGAAAACTGGCAATAGTT | + |
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Preference number: 3 (lower is better) Translates to: FIYSLIKMTATTVPSNTLGGCSP*GKLAIV Trigger: AACTATTGCCAGTTTTCCCAAAGGTGAGCAGCCTCC...TAAGGTGTTACTCGGCACCGTTGTTGCGGTCATCTTTATAAGTGAATAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGGAGTTCGTCATGGCTaGAGAGGCCTCTCTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRSLCGKQLEVRCAGKEGVRHG*RGLSWG Trigger: GCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCC...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGTCTCCAGCCCTTCACTaGGCGAGTCCACAGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKSPALH*ASPQTR Trigger: CCGAGTCTGTGGACTCGCTCAGTGAAGGGCTGGAGA...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGCTCTCTGGCATCTATTaGCAGCGTCTCCAGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKLSGIY*QRLQPF Trigger: GAAGGGCTGGAGACGCTGTCAATAGATGCCAGAGAG...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGTGGAGTCTGGGGCACTaGCACTTGCTTCTGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKWSLGH*HLLLMQ Trigger: CTGCATCAGAAGCAAGTGGCAGTGCCCCAGACTCCA...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGTCCTCCTCTCCTGTTaGCTGGAAATACCTCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: SRSLCGKQLEVRCAGKEAVLLSC*LEIPPD Trigger: ATCGGGAGGTATTTCCAGGCAACAGGAGAGGAGGAC...AGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | AAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACGCAGGCTGCTCCTCTTaGATGGGGGCCGACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: KQLEVRCAGKEAAHLWENAGCSS*MGADLL Trigger: CAGTAAGTCGGCCCCCATTCAAGAGGAGCAGCCTGC...GTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGACAACTCGGTACCGTaGAAGAGAAACAGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKDNSVP*KRNSAA Trigger: CGCTGCACTGTTTCTCTTGCACGGTACCGAGTTGTC...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGACTCAAGGACACAGGTaGCACCAAGCTGCATCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKTQGHR*HQAASR Trigger: TCTCGATGCAGCTTGGTGGCACCTGTGTCCTTGAGT...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGGAGAGGCCCTTGGTTTaGGCTGTGGGAGCCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLERPLV*AVGAPF Trigger: AAAAGGGGCTCCCACAGCGCAAACCAAGGGCCTCTC...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | TCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGATCCTCCAGCTCTCTaGCATCTATTGACAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRSLCGKQLEVRCAGKEADPPAL*HLLTAS Trigger: AGACGCTGTCAATAGATGCCAGAGAGCTGGAGGATC...AGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTCTCCACATCACAGGTaGAGCGGGCTACCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLSPHHR*SGLPFQ Trigger: TTGGAAGGGTAGCCCGCTTCACCTGTGATGTGGAGA...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | AAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACGGGTGGGCTAGGCTCTaGGATGGCTCCAGTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: KQLEVRCAGKEAAHLWENGWARL*DGSSSI Trigger: AATGGAACTGGAGCCATCTCAGAGCCTAGCCCACCC...GTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGCTCCTGGGGTGGTTCTaGACAGAGATTTGGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLLLGWF*TEIWQR Trigger: ACGCTGCCAAATCTCTGTCCAGAACCACCCCAGGAG...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATCGACTTACTGGAGTCTaGGGCACTGCCACTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHRLTGV*GTATCF Trigger: GAAGCAAGTGGCAGTGCCCCAGACTCCAGTAAGTCG...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATAGCAGAGCCATCACTTaGGCCACTCAAGGACACAGG | + |
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Preference number: 4 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHSRAIT*ATQGHR Trigger: CCTGTGTCCTTGAGTGGCCCAAGTGATGGCTCTGCT...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CAA 72 bp | GGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTaGGGAAAACTGGCAATAGTTCCCCTGGTTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGEVRWEGGCSP*GKLAIVPLVPG Trigger: ACCAGGAACCAGGGGAACTATTGCCAGTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTTTACTATCCATTCTTTaGGCACTTCACTGGCACTAC | + |
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Preference number: 4 (lower is better) Translates to: SRSLCGKQLEVRCAGKEALLSIL*ALHWHY Trigger: GTAGTGCCAGTGAAGTGCTCAAAGAATGGATAGTAA...AGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGTTACGTGGTAACCATTaGTGCTGCCTTTCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKLRGNH*CCLSLK Trigger: CTTCAGAGAAAGGCAGCATCAATGGTTACCACGTAA...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATCTCCATTCCCAGATTTaGAACCTGTGCTCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHLHSQI*NLCSWG Trigger: ACCCCAGGAGCACAGGTTTCAAATCTGGGAATGGAG...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGCAGTTGTCAAAGTGCTaGAAGACCAGGATGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKQLSKC*KTRMIS Trigger: TGAGATCATCCTGGTCTTGCAGCACTTTGACAACTG...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGCATTGTTGCTCTTATTaGGAACTATCGCACGTACCG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKHCCSY*ELSHVP Trigger: CGGTACGTGCGATAGTTCCCAATAAGAGCAACAATG...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGCAGAGGCCTCTCTTaGGGCACAGTTTCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLCRGLS*GTVSLV Trigger: AACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCA...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTTCCATTAAACAGCTTTaGAATTCGGCAAACGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SRSLCGKQLEVRCAGKEASIKQL*NSANAC Trigger: ACAAGCGTTTGCCGAATTGCAAAGCTGTTTAATGGA...AGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TCGAATGGACTGGAGACTGGACTAGCAGACACTCTTCCTCCCGGAGCCTCTGCGCTGAGTTCAACCAACTaGTCCTCTGACATGCGAACG | + |
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Preference number: 4 (lower is better) Translates to: SNGLETGLADTLPPGASALSSTN*SSDMRT Trigger: CGTTCGCATGTCAGAGGAGCAGTTGGTTGAACTCAG...CGCAGAGGCTCCGGGAGGAAGAGTGTCTGCTAGTCCAGTCTCCAGTCCATTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | GACCAACCAGAGTCAGTCCATATCACTAGGAGAGGCCAAGGGAAAACAGCTTTCGTGGGAGCCCCTTTTTaGACGAAGGCTTGGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: DQPESVHITRRGQGKTAFVGAPF*TKAWVG Trigger: GCCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCAC...GAAAGCTGTTTTCCCTTGGCCTCTCCTAGTGATATGGACTGACTCTGGTTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGCTAGCTTTTTATTGGTaGAAGAGAGTGGAACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKLAFYW*KRVERS Trigger: AGAACGTTCCACTCTCTTCCACCAATAAAAAGCTAG...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAACTGCCACTTGCTTCTaGTGCAGGCTTTGGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FPWFLVKTTNQSQSISLGTATCF*CRLWLA Trigger: AGCAAGCCAAAGCCTGCATCAGAAGCAAGTGGCAGT...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | GACCAACCAGAGTCAGTCCATATCACTAGGAGAGGCCAAGGGAAAACAGCTTTCAGCTCCGCTTTCTTCTaGCGGCTGAGCAAGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: DQPESVHITRRGQGKTAFSSAFF*RLSKIS Trigger: GGAAATCTTGCTCAGCCGGCAGAAGAAAGCGGAGCT...GAAAGCTGTTTTCCCTTGGCCTCTCCTAGTGATATGGACTGACTCTGGTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATAACCTAGCTTTTTATTaGTGGAAGAGAGTGGAACGT | + |
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Preference number: 4 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHNLAFY*WKRVER Trigger: ACGTTCCACTCTCTTCCACCAATAAAAAGCTAGGTT...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGACCTTGGTTTGCGCTGTaGGAGCCCCTTTTTGAACGA | + |
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Preference number: 4 (lower is better) Translates to: FPWFLVKTTNQSQSISLGPWFAL*EPLFER Trigger: TCGTTCAAAAAGGGGCTCCCACAGCGCAAACCAAGG...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| 3UTR CAA 72 bp | GCCGGGTTTCAGCCTAAGGTAAGCGGAAACAAGGCTTaGGGCATTTGGAAGAAACTGCAGGTTAAGGTACGG | + |
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Preference number: 4 (lower is better) Translates to: AGFQPKVSGNKA*GIWKKLQVKVR Trigger: CCGTACCTTAACCTGCAGTTTCTTCCAAATGCCCAAAGCCTTGTTTCCGCTTACCTTAGGCTGAAACCCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAGTGCAAGAGAAACAGTaGAGCGCTGGAGGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPWFLVKTTNQSQSISLGVQEKQ*SAGGLS Trigger: TGAAAGACCTCCAGCGCTGCACTGTTTCTCTTGCAC...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CCA 90 bp | CCTAAGGTAAGCGGAAACAAGGCTTTGGGCATTTGGAAGAAACTGCAGGTTAAGCCTGTGCTCCTGGGGTaGTTCTGGACAGAGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKVSGNKALGIWKKLQVKPVLLG*FWTEIW Trigger: CCAAATCTCTGTCCAGAACCACCCCAGGAGCACAGG...CTTAACCTGCAGTTTCTTCCAAATGCCCAAAGCCTTGTTTCCGCTTACCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATAGGACAGTATTGGACTaGAAATCAAAAATGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHRTVLD*KSKMNP Trigger: AGGATTCATTTTTGATTTGCAGTCCAATACTGTCCT...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTATTCACTTATAAAGATGACCGCAACAACGGTGCCGAGTAACACCTTAGTCCAGCGTCTCTGCTaGGGCAAACTCGGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIYSLIKMTATTVPSNTLVQRLC*GKLGIL Trigger: GAGGATCCCGAGTTTGCCGCAGCAGAGACGCTGGAC...TAAGGTGTTACTCGGCACCGTTGTTGCGGTCATCTTTATAAGTGAATAAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTATTCACTTATAAAGATGACCGCAACAACGGTGCCGAGTAACACCTTAGCTGCAAGACCAGGATaGTCTCATTGTTGCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FIYSLIKMTATTVPSNTLAARPG*SHCCSY Trigger: ATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGC...TAAGGTGTTACTCGGCACCGTTGTTGCGGTCATCTTTATAAGTGAATAAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGTTGTGCCCGGTAGCCTaGTCCTCCTCTCCTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKELCPVA*SSSPVA Trigger: GGCAACAGGAGAGGAGGACAAGGCTACCGGGCACAA...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 90 bp | GCTCGCCGGCGTTTCCTGGGGCTTGTGGCGGAACACCCTGATACCTaGGCCCGGAAGAATACCATGAGCTGTTTCTGTAGCGGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRRFLGLVAEHPDT*ARKNTMSCFCSGPH Trigger: GTGTGGGCCGCTACAGAAACAGCTCATGGTATTCTTCCGGGCCCAGGTATCAGGGTGTTCCGCCACAAGCCCCAGGAAACGCCGGCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 90 bp | ATTGGTCCCTGCAGAGTAAGGGCGACTCCGCTCGCCGGCGTTTCCTaGGGCTTGTGGCGGAACACCCTGATACCTGGGCCCGGAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: IGPCRVRATPLAGVS*GLWRNTLIPGPGRI Trigger: TATTCTTCCGGGCCCAGGTATCAGGGTGTTCCGCCACAAGCCCCAGGAAACGCCGGCGAGCGGAGTCGCCCTTACTCTGCAGGGACCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGTGTCCTCCTCTCCTGTaGCCTGGAAATACCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKECPPLL*PGNTSR Trigger: TCGGGAGGTATTTCCAGGCAACAGGAGAGGAGGACA...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | AAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACCAGCCTGAGAGGCCCTaGGTTTGCGCTGTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQLEVRCAGKEAAHLWENQPERP*VCAVGA Trigger: GGCTCCCACAGCGCAAACCAAGGGCCTCTCAGGCTG...GTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 90 bp | CTCTGCTGCGGCAAACTCGGGATCCTCCAGCTCTCTGGCATCTATTaGCAGCGTCTCCAGCCCTTCACTGAGCGAGTCCACAGACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCCGKLGILQLSGIY*QRLQPFTERVHRLG Trigger: GCCGAGTCTGTGGACTCGCTCAGTGAAGGGCTGGAGACGCTGTCAATAGATGCCAGAGAGCTGGAGGATCCCGAGTTTGCCGCAGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS TCA 90 bp | GGCTTGTGGCGGAACACCCTGATACCTGGGCCCGGAAGAATACCATaGGCTGTTTCTGTAGCGGCCCACACTGTCATGGCGCCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLWRNTLIPGPGRIP*AVSVAAHTVMAPWV Trigger: AACCCAGGGCGCCATGACAGTGTGGGCCGCTACAGAAACAGCTCATGGTATTCTTCCGGGCCCAGGTATCAGGGTGTTCCGCCACAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 90 bp | GCAGGGCCGGTCACTGGAGTTCGTCATGGCTGCAGAGGCCTCTCTTaGGGCACAGTTTCTCTTGTTAGCACCTGGGAGGCTGGGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGPVTGVRHGCRGLS*GTVSLVSTWEAGNR Trigger: TCTGTTCCCAGCCTCCCAGGTGCTAACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCCAGTGACCGGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGTGGGAGCCCCTTTTaGAACGAAGGCTTGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLCGSPF*NEGLGG Trigger: CCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCACA...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGTTTTGTCCACACAGTaGTCAAAGTGCTGCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKEVLSTQ*SKCCKT Trigger: GGTCTTGCAGCACTTTGACAACTGTGTGGACAAAAC...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGACCTTCCATGAACGCTaGCACTGTTTTGTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKETFHER*HCFVHT Trigger: TGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGT...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTTGCGCAGTCAAAGATTaGGGCTCAAAGTCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRSLCGKQLEVRCAGKEACAVKD*GSKSET Trigger: TGTCTCTGACTTTGAGCCCAAATCTTTGACTGCGCA...AGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | AAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACCAGCAGAGCCATCACTaGGGCCACTCAAGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: KQLEVRCAGKEAAHLWENQQSHH*GHSRTQ Trigger: CTGTGTCCTTGAGTGGCCCAAGTGATGGCTCTGCTG...GTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 90 bp | CTGTGGGAGCCCCTTTTTGAACGAAGGCTTGGGTGGGCTAGGCTCTaGGATGGCTCCAGTTCCATTGGTCCCTGCAGAGTAAGGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: LWEPLFERRLGWARL*DGSSSIGPCRVRAT Trigger: AGTCGCCCTTACTCTGCAGGGACCAATGGAACTGGAGCCATCTCAGAGCCTAGCCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGTCATTGTTGCTCTTATaGGGAACTATCGCACGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKESLLLL*GTIART Trigger: GGTACGTGCGATAGTTCCCAATAAGAGCAACAATGA...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGCTTCTGATGCAGGCTTaGGCTTGCTCTTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKELLMQA*ACSSSF Trigger: AAAAGAAGAAGAGCAAGCCAAAGCCTGCATCAGAAG...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | AAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGGCTGCTCACCTTTGGGAAAACCTGCAGAGGCCTCTCTaGGGGCACAGTTTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQLEVRCAGKEAAHLWENLQRPL*GHSFSC Trigger: ACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAG...GTTTTCCCAAAGGTGAGCAGCCTCCTTCCCAGCGCACCTCACCTCCAGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 90 bp | TCTCTGAAGATGCAGGCTGCTCCTCTTGAATGGGGGCCGACTTACTaGAGTCTGGGGCACTGCCACTTGCTTCTGATGCAGGCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKMQAAPLEWGPTY*SLGHCHLLLMQALA Trigger: AGCCAAAGCCTGCATCAGAAGCAAGTGGCAGTGCCCCAGACTCCAGTAAGTCGGCCCCCATTCAAGAGGAGCAGCCTGCATCTTCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGGAGACCAGGATGATCTCATaGTTGCTCTTATTGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLCGKQLEVRCAGKETRMIS*LLLLGT Trigger: AGTTCCCAATAAGAGCAACAATGAGATCATCCTGGT...CTCCTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCGAATGGACTGGAGACTGGACTAGCAGACACTCTTCCTCCCGGAGCCTCTGCGTCTCCATTCCCAGATTaGAAACCTGTGCTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SNGLETGLADTLPPGASASPFPD*KPVLLG Trigger: CCCCAGGAGCACAGGTTTCAAATCTGGGAATGGAGA...CGCAGAGGCTCCGGGAGGAAGAGTGTCTGCTAGTCCAGTCTCCAGTCCATTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCTTCCTCCCGGAGCCTCTGCGGTAAGCAGCTGGAGGTGAGGTGCGCTGGGAAGTTGAGTAGCTGTTCTTaGGATGTGACACTTGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSLCGKQLEVRCAGKLSSCS*DVTLVR Trigger: TCGGACAAGTGTCACATCCAAAGAACAGCTACTCAA...CTTCCCAGCGCACCTCACCTCCAGCTGCTTACCGCAGAGGCTCCGGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | CATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGTGGCATTTTTTGAACGAAGGCTaGGGTGGGCTAGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFYSRSGNWWEPGRHLWHFLNEG*GGLGSE Trigger: CTCAGAGCCTAGCCCACCCAAGCCTTCGTTCAAAAA...ATGCCACAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 90 bp | GCTGCTCCTCTTGAATGGGGGCCGACTTACTGGAGTCTGGGGCACTaGCACTTGCTTCTGATGCAGGCTTTGGCTTGCTCTTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAPLEWGPTYWSLGH*HLLLMQALACSSSF Trigger: AAAAGAAGAAGAGCAAGCCAAAGCCTGCATCAGAAGCAAGTGGCAGTGCCCCAGACTCCAGTAAGTCGGCCCCCATTCAAGAGGAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS GCA 90 bp | GCTCCTGGGGTGGTTCTGGACAGAGATTTGGCAGCGTTCCGGGATTaGTGGACATTCGAGATAGAGTGCGCAGTCAAAGATTTGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: APGVVLDRDLAAFRD*WTFEIECAVKDLGS Trigger: TGAGCCCAAATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCTGTCCAGAACCACCCCAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS GCA 90 bp | CAGAGCCATCACTTGGGCCACTCAAGGACACAGGTGCCACCAAGCTaGATCGAGAGCGGGTTGAGTAGCTGTTCTTTGGATGTGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: QSHHLGHSRTQVPPS*IESGLSSCSLDVTL Trigger: AAGTGTCACATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCAGCTTGGTGGCACCTGTGTCCTTGAGTGGCCCAAGTGATGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | ACCCCTCATTTCTACTCCCGCTCAGGCAACTGGTGGGAACCTGGCAGGCACCTGAACGCTTGCACTGTTTaGTCCACACAGTTGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPHFYSRSGNWWEPGRHLNACTV*STQLSK Trigger: CTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTT...CAGGTGCCTGCCAGGTTCCCACCAGTTGCCTGAGCGGGAGTAGAAATGAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TCGAATGGACTGGAGACTGGACTAGCAGACACTCTTCCTCCCGGAGCCTCTGCGGAACCTAGCTTTTTATaGGTGGAAGAGAGTGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: SNGLETGLADTLPPGASAEPSFL*VEESGT Trigger: CGTTCCACTCTCTTCCACCAATAAAAAGCTAGGTTC...CGCAGAGGCTCCGGGAGGAAGAGTGTCTGCTAGTCCAGTCTCCAGTCCATTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 90 bp | GTTGATGGCACCGTTTACGTGGTAACCATTGATGCTGCCTTTCTCTaGAGATGCAGGCTGCTCCTCTTGAATGGGGGCCGACTTACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VDGTVYVVTIDAAFL*RCRLLLLNGGRLTG Trigger: TCCAGTAAGTCGGCCCCCATTCAAGAGGAGCAGCCTGCATCTTCAGAGAAAGGCAGCATCAATGGTTACCACGTAAACGGTGCCATCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAGCTCTCTGGCATCTATaGACAGCGTCTCCAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FPWFLVKTTNQSQSISLGALWHL*TASPAL Trigger: AAGGGCTGGAGACGCTGTCAATAGATGCCAGAGAGC...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | CCTAAGGTAAGCGGAAACAAGGCTTTGGGCATTTGGAAGAAACTGCAGGTTAAGCTGGGGCACTGCCACTaGCTTCTGATGCAGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKVSGNKALGIWKKLQVKLGHCH*LLMQAL Trigger: CAAAGCCTGCATCAGAAGCAAGTGGCAGTGCCCCAG...CTTAACCTGCAGTTTCTTCCAAATGCCCAAAGCCTTGTTTCCGCTTACCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 90 bp | AGAGATTTGGCAGCGTTCCGGGATTGCTGGACATTCGAGATAGAGTaGGCAGTCAAAGATTTGGGCTCAAAGTCAGAGACACCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDLAAFRDCWTFEIE*AVKDLGSKSETPFS Trigger: GGAGAATGGTGTCTCTGACTTTGAGCCCAAATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGATGCATCGAGAGCGGGTaGAGTAGCTGTTCTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPWFLVKTTNQSQSISLGCIESG*SSCSLD Trigger: ATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCA...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 90 bp | CTTTTTATTGGTGGAAGAGAGTGGAACGTTCTCCATTCCCAGATTTaGAACCTGTGCTCCTGGGGTGGTTCTGGACAGAGATTTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFIGGREWNVLHSQI*NLCSWGGSGQRFGS Trigger: GCTGCCAAATCTCTGTCCAGAACCACCCCAGGAGCACAGGTTTCAAATCTGGGAATGGAGAACGTTCCACTCTCTTCCACCAATAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063517.6 ENSMUST00000229147.2 |
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| CDS TCA 90 bp | GTCCGAAAGAATCGATACTCTGTTTCAGAGTCTCCACATCACAGGTaGAGCGGGCTACCCTTCCAAGGTCTTCATCATATTTCCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRKNRYSVSESPHHR*SGLPFQGLHHISAH Trigger: GTGAGCGGAAATATGATGAAGACCTTGGAAGGGTAGCCCGCTTCACCTGTGATGTGGAGACTCTGAAACAGAGTATCGATTCTTTCGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 90 bp | CTTAATGGACGCATCCATCTCTTCTTTAACGACAACTCGGTACCGTaGAAGAGAAACAGTGCAGCGCTGGAGGTCTTTCACCGATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNGRIHLFFNDNSVP*KRNSAALEVFHRFL Trigger: GAGAAATCGGTGAAAGACCTCCAGCGCTGCACTGTTTCTCTTGCACGGTACCGAGTTGTCGTTAAAGAAGAGATGGATGCGTCCATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
||
| CDS GCA 90 bp | CGCTCACTGACAAAGTGCTTGATATCAGCCCTGAGTTCAACCAACTaGTCCTCTGACATGCGAACGGCCACATCTGTCATCTTCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSLTKCLISALSSTN*SSDMRTATSVIFFR Trigger: TCTAAAGAAGATGACAGATGTGGCCGTTCGCATGTCAGAGGAGCAGTTGGTTGAACTCAGGGCTGATATCAAGCACTTTGTCAGTGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
||
| CDS TCA 90 bp | GCACTGTTTTGTCCACACAGTTGTCAAAGTGCTGCAAGACCAGGATaGTCTCATTGTTGCTCTTATTGGGAACTATCGCACGTACCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ALFCPHSCQSAARPG*SHCCSYWELSHVPR Trigger: ACGCGGTACGTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAAAACAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000229663.2 ENSMUST00000230628.2 |
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| CDS GCA 90 bp | CGAACGGCCACATCTGTCATCTTCTTTAGAAGCTCCGCTTTCTTCTaGCGGCTGAGCAAGATTTCCATTGCTTCAGCTTTCACTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RTATSVIFFRSSAFF*RLSKISIASAFTLS Trigger: GGATAAAGTGAAAGCTGAAGCAATGGAAATCTTGCTCAGCCGGCAGAAGAAAGCGGAGCTTCTAAAGAAGATGACAGATGTGGCCGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAGATGCAGGCTTTGGCTaGCTCTTCTTCTTTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPWFLVKTTNQSQSISLGDAGFG*LFFFLF Trigger: GAACAAAAAGAAGAAGAGCAAGCCAAAGCCTGCATC...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGGTTCCTGGTGAAAACGACCAACCAGAGTCAGTCCATATCACTAGGAGTTACTATCCATTCTTaGAGCACTTCACTGGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FPWFLVKTTNQSQSISLGVTIHS*STSLAL Trigger: TAGTGCCAGTGAAGTGCTCAAAGAATGGATAGTAAC...TCCTAGTGATATGGACTGACTCTGGTTGGTCGTTTTCACCAGGAACCAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTATTCACTTATAAAGATGACCGCAACAACGGTGCCGAGTAACACCTTACATGGCGCCCTGGGTTaGAGGGGTCTGCGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIYSLIKMTATTVPSNTLHGALG*RGLRSF Trigger: AAAAGACCGCAGACCCCTCAAACCCAGGGCGCCATG...TAAGGTGTTACTCGGCACCGTTGTTGCGGTCATCTTTATAAGTGAATAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTATTCACTTATAAAGATGACCGCAACAACGGTGCCGAGTAACACCTTATGGGCCAGGACAGTATaGGACTGCAAATCAAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: FIYSLIKMTATTVPSNTLWARTV*DCKSKM Trigger: CATTTTTGATTTGCAGTCCAATACTGTCCTGGCCCA...TAAGGTGTTACTCGGCACCGTTGTTGCGGTCATCTTTATAAGTGAATAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | AGGGCGACTCCGCTCGCCGGCGTTTCCTGGGGCTTGTaGCGGAACACCCTGATACCTGGGCCCGGAAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: RATPLAGVSWGL*RNTLIPGPGRI Trigger: TATTCTTCCGGGCCCAGGTATCAGGGTGTTCCGCCACAAGCCCCAGGAAACGCCGGCGAGCGGAGTCGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | GAAATACCTCCCGATGAGCCTGGCAGGGCCGGTCACTaGAGTTCGTCATGGCTGCAGAGGCCTCTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EIPPDEPGRAGH*SSSWLQRPLLG Trigger: CCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCCAGTGACCGGCCCTGCCAGGCTCATCGGGAGGTATTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | TTGTGCCCGGTAGCCTTGTCCTCCTCTCCTGTTGCCTaGAAATACCTCCCGATGAGCCTGGCAGGGCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LCPVALSSSPVA*KYLPMSLAGPV Trigger: GACCGGCCCTGCCAGGCTCATCGGGAGGTATTTCCAGGCAACAGGAGAGGAGGACAAGGCTACCGGGCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | GATGAGCCTGGCAGGGCCGGTCACTGGAGTTCGTCATaGCTGCAGAGGCCTCTCTTGGGGCACAGTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DEPGRAGHWSSS*LQRPLLGHSFS Trigger: AGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCCAGTGACCGGCCCTGCCAGGCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | CGCAGCTTCAGCCTGAGAGGCCCTTGGTTTGCGCTGTaGGAGCCCCTTTTTGAACGAAGGCTTGGGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSFSLRGPWFAL*EPLFERRLGWA Trigger: AGCCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCACAGCGCAAACCAAGGGCCTCTCAGGCTGAAGCTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 72 bp | TTCTGTAGCGGCCCACACTGTCATGGCGCCCTGGGTTaGAGGGGTCTGCGGTCTTTTGGCTTTGTGCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FCSGPHCHGALG*RGLRSFGFVPG Trigger: ACCGGGCACAAAGCCAAAAGACCGCAGACCCCTCAAACCCAGGGCGCCATGACAGTGTGGGCCGCTACAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 72 bp | CTCCAGCACAGATCCAGTTCTGTCCAGCGTCTCTGCTaGGGCAAACTCGGGATCCTCCAGCTCTCTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LQHRSSSVQRLC*GKLGILQLSGI Trigger: GATGCCAGAGAGCTGGAGGATCCCGAGTTTGCCGCAGCAGAGACGCTGGACAGAACTGGATCTGTGCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS GCA 72 bp | AGCCTGGCAGGGCCGGTCACTGGAGTTCGTCATGGCTaGAGAGGCCTCTCTTGGGGCACAGTTTCTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLAGPVTGVRHG*RGLSWGTVSLV Trigger: AACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCCAGTGACCGGCCCTGCCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 72 bp | GGGGTCTGCGGTCTTTTGGCTTTGTGCCCGGTAGCCTaGTCCTCCTCTCCTGTTGCCTGGAAATACCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVCGLLALCPVA*SSSPVAWKYLP Trigger: CGGGAGGTATTTCCAGGCAACAGGAGAGGAGGACAAGGCTACCGGGCACAAAGCCAAAAGACCGCAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | ATGAGCTGTTTCTGTAGCGGCCCACACTGTCATGGCGCCCTGGGTTaGAGGGGTCTGCGGTCTTTTGGCTTTGTGCCCGGTAGCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MSCFCSGPHCHGALG*RGLRSFGFVPGSLV Trigger: GACAAGGCTACCGGGCACAAAGCCAAAAGACCGCAGACCCCTCAAACCCAGGGCGCCATGACAGTGTGGGCCGCTACAGAAACAGCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | GAGGCCCTTGGTTTGCGCTGTGGGAGCCCCTTTTTGAACGAAGGCTaGGGTGGGCTAGGCTCTGAGATGGCTCCAGTTCCATTGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EALGLRCGSPFLNEG*GGLGSEMAPVPLVP Trigger: AGGGACCAATGGAACTGGAGCCATCTCAGAGCCTAGCCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCACAGCGCAAACCAAGGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | GAGTTCGTCATGGCTGCAGAGGCCTCTCTTGGGGCACAGTTTCTCTaGTTAGCACCTGGGAGGCTGGGAACAGAGGCATCAGGGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EFVMAAEASLGAQFL*LAPGRLGTEASGEE Trigger: TTCCTCCCCTGATGCCTCTGTTCCCAGCCTCCCAGGTGCTAACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 72 bp | GGCAAACTCGGGATCCTCCAGCTCTCTGGCATCTATTaGCAGCGTCTCCAGCCCTTCACTGAGCGAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GKLGILQLSGIY*QRLQPFTERVH Trigger: GTGGACTCGCTCAGTGAAGGGCTGGAGACGCTGTCAATAGATGCCAGAGAGCTGGAGGATCCCGAGTTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS TCA 72 bp | CGGAACACCCTGATACCTGGGCCCGGAAGAATACCATaGGCTGTTTCTGTAGCGGCCCACACTGTCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RNTLIPGPGRIP*AVSVAAHTVMA Trigger: CGCCATGACAGTGTGGGCCGCTACAGAAACAGCTCATGGTATTCTTCCGGGCCCAGGTATCAGGGTGTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 72 bp | ATTCTCCAGCACAGATCCAGTTCTGTCCAGCGTCTCTaGTGCGGCAAACTCGGGATCCTCCAGCTCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILQHRSSSVQRL*CGKLGILQLSG Trigger: GCCAGAGAGCTGGAGGATCCCGAGTTTGCCGCAGCAGAGACGCTGGACAGAACTGGATCTGTGCTGGAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CCA 72 bp | TGCCTTTCTCTGAAGATGCAGGCTGCTCCTCTTGAATaGGGGCCGACTTACTGGAGTCTGGGGCACTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLSLKMQAAPLE*GPTYWSLGHCH Trigger: GTGGCAGTGCCCCAGACTCCAGTAAGTCGGCCCCCATTCAAGAGGAGCAGCCTGCATCTTCAGAGAAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | GGTTTGCGCTGTGGGAGCCCCTTTTTGAACGAAGGCTaGGGTGGGCTAGGCTCTGAGATGGCTCCAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLRCGSPFLNEG*GGLGSEMAPVP Trigger: TGGAACTGGAGCCATCTCAGAGCCTAGCCCACCCAAGCCTTCGTTCAAAAAGGGGCTCCCACAGCGCAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 72 bp | ATGCTGCCTTTCTCTGAAGATGCAGGCTGCTCCTCTTaGATGGGGGCCGACTTACTGGAGTCTGGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: MLPFSEDAGCSS*MGADLLESGAL Trigger: CAGTGCCCCAGACTCCAGTAAGTCGGCCCCCATTCAAGAGGAGCAGCCTGCATCTTCAGAGAAAGGCAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS GCA 72 bp | CTTGAATGGGGGCCGACTTACTGGAGTCTGGGGCACTaGCACTTGCTTCTGATGCAGGCTTTGGCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LEWGPTYWSLGH*HLLLMQALACS Trigger: AGAGCAAGCCAAAGCCTGCATCAGAAGCAAGTGGCAGTGCCCCAGACTCCAGTAAGTCGGCCCCCATTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CCA 72 bp | GTCACTGGAGTTCGTCATGGCTGCAGAGGCCTCTCTTaGGGCACAGTTTCTCTTGTTAGCACCTGGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VTGVRHGCRGLS*GTVSLVSTWEA Trigger: AGCCTCCCAGGTGCTAACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCATGACGAACTCCAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | CGTTTCCTGGGGCTTGTGGCGGAACACCCTGATACCTaGGCCCGGAAGAATACCATGAGCTGTTTCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFLGLVAEHPDT*ARKNTMSCFCS Trigger: GCTACAGAAACAGCTCATGGTATTCTTCCGGGCCCAGGTATCAGGGTGTTCCGCCACAAGCCCCAGGAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 72 bp | TGGGGGCCGACTTACTGGAGTCTGGGGCACTGCCACTaGCTTCTGATGCAGGCTTTGGCTTGCTCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WGPTYWSLGHCH*LLMQALACSSS Trigger: AGAAGAAGAGCAAGCCAAAGCCTGCATCAGAAGCAAGTGGCAGTGCCCCAGACTCCAGTAAGTCGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | ATGGCTGCAGAGGCCTCTCTTGGGGCACAGTTTCTCTaGTTAGCACCTGGGAGGCTGGGAACAGAGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MAAEASLGAQFL*LAPGRLGTEAS Trigger: TGATGCCTCTGTTCCCAGCCTCCCAGGTGCTAACAAGAGAAACTGTGCCCCAAGAGAGGCCTCTGCAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 72 bp | CCCCTTTTTGAACGAAGGCTTGGGTGGGCTAGGCTCTaGGATGGCTCCAGTTCCATTGGTCCCTGCAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PLFERRLGWARL*DGSSSIGPCRV Trigger: TACTCTGCAGGGACCAATGGAACTGGAGCCATCTCAGAGCCTAGCCCACCCAAGCCTTCGTTCAAAAAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 72 bp | CACTTGGGCCACTCAAGGACACAGGTGCCACCAAGCTaGATCGAGAGCGGGTTGAGTAGCTGTTCTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGHSRTQVPPS*IESGLSSCSLD Trigger: ATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCAGCTTGGTGGCACCTGTGTCCTTGAGTGGCCCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | TGCTCCTGGGGTGGTTCTGGACAGAGATTTGGCAGCGTTCCGGGATaGCTGGACATTCGAGATAGAGTGCGCAGTCAAAGATTTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CSWGGSGQRFGSVPG*LDIRDRVRSQRFGL Trigger: GAGCCCAAATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCTGTCCAGAACCACCCCAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CAA 72 bp | AGGACACAGGTGCCACCAAGCTGCATCGAGAGCGGGTaGAGTAGCTGTTCTTTGGATGTGACACTTGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RTQVPPSCIESG*SSCSLDVTLVR Trigger: TCGGACAAGTGTCACATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCAGCTTGGTGGCACCTGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | GGCCACTCAAGGACACAGGTGCCACCAAGCTGCATCGAGAGCGGGTaGAGTAGCTGTTCTTTGGATGTGACACTTGTCCGAAAGAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: GHSRTQVPPSCIESG*SSCSLDVTLVRKNR Trigger: TCGATTCTTTCGGACAAGTGTCACATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCAGCTTGGTGGCACCTGTGTCCTTGAGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS TCA 72 bp | GGTGGAAGAGAGTGGAACGTTCTCCATTCCCAGATTTaGAACCTGTGCTCCTGGGGTGGTTCTGGACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGREWNVLHSQI*NLCSWGGSGQR Trigger: TCTCTGTCCAGAACCACCCCAGGAGCACAGGTTTCAAATCTGGGAATGGAGAACGTTCCACTCTCTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CAA 72 bp | GGTGGTTCTGGACAGAGATTTGGCAGCGTTCCGGGATaGCTGGACATTCGAGATAGAGTGCGCAGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGSGQRFGSVPG*LDIRDRVRSQR Trigger: TCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCTGTCCAGAACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CAA 72 bp | TGGTGGAAGAGAGTGGAACGTTCTCCATTCCCAGATTaGAAACCTGTGCTCCTGGGGTGGTTCTGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WWKRVERSPFPD*KPVLLGWFWTE Trigger: CTCTGTCCAGAACCACCCCAGGAGCACAGGTTTCAAATCTGGGAATGGAGAACGTTCCACTCTCTTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS GCA 72 bp | GTGGTTCTGGACAGAGATTTGGCAGCGTTCCGGGATTaGTGGACATTCGAGATAGAGTGCGCAGTCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VVLDRDLAAFRD*WTFEIECAVKD Trigger: ATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCTGTCCAGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CAA 90 bp | CAGGTGCCACCAAGCTGCATCGAGAGCGGGTTGAGTAGCTGTTCTTaGGATGTGACACTTGTCCGAAAGAATCGATACTCTGTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVPPSCIESGLSSCS*DVTLVRKNRYSVSE Trigger: CTCTGAAACAGAGTATCGATTCTTTCGGACAAGTGTCACATCCAAAGAACAGCTACTCAACCCGCTCTCGATGCAGCTTGGTGGCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CCA 72 bp | GTTCTGGACAGAGATTTGGCAGCGTTCCGGGATTGCTaGACATTCGAGATAGAGTGCGCAGTCAAAGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLDRDLAAFRDC*TFEIECAVKDL Trigger: CAAATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAACGCTGCCAAATCTCTGTCCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS CAA 72 bp | TCACTGGCACTACCTTCCATGAACGCTTGCACTGTTTaGTCCACACAGTTGTCAAAGTGCTGCAAGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLALPSMNACTV*STQLSKCCKTR Trigger: CCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGTAGTGCCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 90 bp | TTCCGGGATTGCTGGACATTCGAGATAGAGTGCGCAGTCAAAGATTaGGGCTCAAAGTCAGAGACACCATTCTCCAGCACAGATCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FRDCWTFEIECAVKD*GSKSETPFSSTDPV Trigger: AACTGGATCTGTGCTGGAGAATGGTGTCTCTGACTTTGAGCCCAAATCTTTGACTGCGCACTCTATCTCGAATGTCCAGCAATCCCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229073.2 ENSMUST00000229147.2 |
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| CDS GCA 72 bp | TTGAGCACTTCACTGGCACTACCTTCCATGAACGCTTaGACTGTTTTGTCCACACAGTTGTCAAAGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTSLALPSMNA*TVLSTQLSKCC Trigger: GCAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGTAGTGCCAGTGAAGTGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | CAGTTGTCAAAGTGCTGCAAGACCAGGATGATCTCATaGTTGCTCTTATTGGGAACTATCGCACGTACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: QLSKCCKTRMIS*LLLLGTIARTA Trigger: CGCGGTACGTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000229663.2 ENSMUST00000230628.2 |
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| CDS CAA 90 bp | TTGAGCACTTCACTGGCACTACCTTCCATGAACGCTTGCACTGTTTaGTCCACACAGTTGTCAAAGTGCTGCAAGACCAGGATGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSTSLALPSMNACTV*STQLSKCCKTRMIS Trigger: TGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGTAGTGCCAGTGAAGTGCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 90 bp | CTGGCACTACCTTCCATGAACGCTTGCACTGTTTTGTCCACACAGTaGTCAAAGTGCTGCAAGACCAGGATGATCTCATTGTTGCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LALPSMNACTVLSTQ*SKCCKTRMISLLLL Trigger: TAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGTAGTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | TGCTGCAAGACCAGGATGATCTCATTGTTGCTCTTATaGGGAACTATCGCACGTACCGCGTTTATCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCKTRMISLLLL*GTIARTAFIFS Trigger: GGAGAAGATAAACGCGGTACGTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000229663.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | CCTTCCATGAACGCTTGCACTGTTTTGTCCACACAGTaGTCAAAGTGCTGCAAGACCAGGATGATCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PSMNACTVLSTQ*SKCCKTRMISL Trigger: CAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 72 bp | TTTGAGCACTTCACTGGCACTACCTTCCATGAACGCTaGCACTGTTTTGTCCACACAGTTGTCAAAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FEHFTGTTFHER*HCFVHTVVKVL Trigger: CAGCACTTTGACAACTGTGTGGACAAAACAGTGCAAGCGTTCATGGAAGGTAGTGCCAGTGAAGTGCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 90 bp | TTGTCCACACAGTTGTCAAAGTGCTGCAAGACCAGGATGATCTCATaGTTGCTCTTATTGGGAACTATCGCACGTACCGCGTTTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSTQLSKCCKTRMIS*LLLLGTIARTAFIF Trigger: GAAGATAAACGCGGTACGTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000229663.2 ENSMUST00000230628.2 |
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| CDS TCA 72 bp | TGTCCACACAGTTGTCAAAGTGCTGCAAGACCAGGATaGTCTCATTGTTGCTCTTATTGGGAACTATCGCAC | + |
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Preference number: 6 (lower is better) Translates to: CPHSCQSAARPG*SHCCSYWELSH Trigger: GTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAACTGTGTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063517.6 ENSMUST00000229066.2 ENSMUST00000229073.2 ENSMUST00000229147.2 ENSMUST00000229663.2 ENSMUST00000230628.2 |
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| CDS TCA 72 bp | AATCGATACTCTGTTTCAGAGTCTCCACATCACAGGTaGAGCGGGCTACCCTTCCAAGGTCTTCATCATATT | + |
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Preference number: 6 (lower is better) Translates to: NRYSVSESPHHR*SGLPFQGLHHI Trigger: AATATGATGAAGACCTTGGAAGGGTAGCCCGCTTCACCTGTGATGTGGAGACTCTGAAACAGAGTATCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS GCA 72 bp | ACATCTGTCATCTTCTTTAGAAGCTCCGCTTTCTTCTaGCGGCTGAGCAAGATTTCCATTGCTTCAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSVIFFRSSAFF*RLSKISIASAF Trigger: GAAAGCTGAAGCAATGGAAATCTTGCTCAGCCGGCAGAAGAAAGCGGAGCTTCTAAAGAAGATGACAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 90 bp | TTGTCAAAGTGCTGCAAGACCAGGATGATCTCATTGTTGCTCTTATaGGGAACTATCGCACGTACCGCGTTTATCTTCTCCTTCATATTC | + |
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Preference number: 6 (lower is better) Translates to: LSKCCKTRMISLLLL*GTIARTAFIFSFIF Trigger: GAATATGAAGGAGAAGATAAACGCGGTACGTGCGATAGTTCCCAATAAGAGCAACAATGAGATCATCCTGGTCTTGCAGCACTTTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS TCA 72 bp | TCATCTTCTTTAGAAGCTCCGCTTTCTTCTGCCGGCTaGGCAAGATTTCCATTGCTTCAGCTTTCACTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SSSLEAPLSSAG*ARFPLLQLSLY Trigger: ATAAAGTGAAAGCTGAAGCAATGGAAATCTTGCTCAGCCGGCAGAAGAAAGCGGAGCTTCTAAAGAAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063517.6 |
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| CDS CAA 72 bp | ATATTCTCAAAGGTTCCTCCCTGGGCCAGGACAGTATaGGACTGCAAATCAAAAATGAATCCTGATGAATCT | + |
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Preference number: 6 (lower is better) Translates to: IFSKVPPWARTV*DCKSKMNPDES Trigger: AGATTCATCAGGATTCATTTTTGATTTGCAGTCCAATACTGTCCTGGCCCAGGGAGGAACCTTTGAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063517.6 ENSMUST00000229147.2 ENSMUST00000230628.2 |
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| CDS CAA 90 bp | TGGAGGTCTTTCACCGATTTCTCAATATTAGAACCTAGCTTTTTATaGGTGGAAGAGAGTGGAACGTTCTCCATTCCCAGATTTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: WRSFTDFSILEPSFL*VEESGTFSIPRFET Trigger: GGTTTCAAATCTGGGAATGGAGAACGTTCCACTCTCTTCCACCAATAAAAAGCTAGGTTCTAATATTGAGAAATCGGTGAAAGACCTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063517.6 ENSMUST00000229147.2 |
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| CDS CAA 72 bp | TTCACCGATTTCTCAATATTAGAACCTAGCTTTTTATaGGTGGAAGAGAGTGGAACGTTCTCCATTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FTDFSILEPSFL*VEESGTFSIPR Trigger: TCTGGGAATGGAGAACGTTCCACTCTCTTCCACCAATAAAAAGCTAGGTTCTAATATTGAGAAATCGGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063517.6 ENSMUST00000229147.2 |
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