Pregenerated sensors for SPATC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049653Ensembl transcript IDs: ENSMUST00000074173.4, ENSMUST00000230221.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGATGCCGCCAGCTCAGGCCGCTCGCGCAGGATGCCGTACTCATTaGCCAGCTGTTCTGTCAGTGCCGGGTGCACCCGCCCGTTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: QMPPAQAARAGCRTH*PAVLSVPGAPARCS Trigger: GCTACAACGGGCGGGTGCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGAGCTGGCGGCATCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR TCA 90 bp | CGTGGGACAGCTGATGGAGGCAGGAGAGCAGCAGGAGGGCGTCCGTaGGCTTGCTGGGGTGCACGGTTTCCAATAGCACACGCTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RGTADGGRRAAGGRP*ACWGARFPIAHAAR Trigger: TCTTGCAGCGTGTGCTATTGGAAACCGTGCACCCCAGCAAGCTCACGGACGCCCTCCTGCTGCTCTCCTGCCTCCATCAGCTGTCCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGCCGGGCACCGGGTGTTACCAGATGAACATAGGTTTGCCGTCATCGTGGCAGCTGTTCTGTCAGTaGCGGGTGCACCCGCCCGTT | + |
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Preference number: 2 (lower is better) Translates to: GQPGTGCYQMNIGLPSSWQLFCQ*RVHPPV Trigger: AACGGGCGGGTGCACCCGGCACTGACAGAACAGCTG...CCACGATGACGGCAAACCTATGTTCATCTGGTAACACCCGGTGCCCGGCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCTTGCTGGGGTGCACGGTTTCCAATAGCACACGCTGCAAGAAGTCCACCGCAGCCACCTTCAGATaGCGCCAGCTCAGGCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: VSLLGCTVSNSTRCKKSTAATFR*RQLRPL Trigger: GAGCGGCCTGAGCTGGCGGCATCTGAAGGTGGCTGC...GGTGGACTTCTTGCAGCGTGTGCTATTGGAAACCGTGCACCCCAGCAAGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCCGCTGTGTGAGCGTCTaGCACAGGTCCTCATCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SGRSRRMPYSLTSCSVSARCVSV*HRSSSN Trigger: GTTGGATGAGGACCTGTGCCAGACGCTCACACAGCG...GGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCCGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCCGCGCTCTGGGAAGATaGTGGACAGGATTCTTCGGT | + |
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Preference number: 2 (lower is better) Translates to: SGRSRRMPYSLTSCSVSARALGR*WTGFFG Trigger: ACCGAAGAATCCTGTCCAGCATCTTCCCAGAGCGCG...GGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCGGGTTTAGGGAGGCCTaGATGATCTTCTCTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCGFREA*MIFSGM Trigger: CATCCCAGAGAAGATCATCCAGGCCTCCCTAAACCC...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGTTTAGGGAGGCCTGGATGATCTTCTCTGGGATGTTGGAGACAGTGAAGCAATGGCCTACAGGGTaGAGTGAGCCTGGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGFREAWMIFSGMLETVKQWPTG*SEPGPA Trigger: GGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTG...CTTCACTGTCTCCAACATCCCAGAGAAGATCATCCAGGCCTCCCTAAACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAAGGATGTTGGAGACAGTaGAGCCGTAGAGACGTACGC | + |
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Preference number: 2 (lower is better) Translates to: VHDAHVTLCERLAQVLIQGCWRQ*SRRDVR Trigger: GCGTACGTCTCTACGGCTTCACTGTCTCCAACATCC...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAAGAGACGTACGCGCTCTaGGAAGATGCTGGACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VHDAHVTLCERLAQVLIQETYAL*EDAGQD Trigger: ATCCTGTCCAGCATCTTCCCAGAGCGCGTACGTCTC...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAAGCTCTGGGAAGATGCTaGACAGGATTCTTCGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: VHDAHVTLCERLAQVLIQALGRC*TGFFGL Trigger: TAGACCGAAGAATCCTGTCCAGCATCTTCCCAGAGC...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR TCA 72 bp | CCAGCTCAGGCCGCTCGCGCAGGATGCCGTACTCATTaGCCAGCTGTTCTGTCAGTGCCGGGTGCACCCGCC | + |
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Preference number: 3 (lower is better) Translates to: PAQAARAGCRTH*PAVLSVPGAPA Trigger: GGCGGGTGCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGAGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGCCGGGCACCGGGTGTTACCAGATGAACATAGGTTTGCCGTCATCGTGGAGGGCGTCCGTGAGCTaGCTGGGGTGCACGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GQPGTGCYQMNIGLPSSWRASVS*LGCTVS Trigger: GGAAACCGTGCACCCCAGCAAGCTCACGGACGCCCT...CCACGATGACGGCAAACCTATGTTCATCTGGTAACACCCGGTGCCCGGCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR TCA 72 bp | GCTGATGGAGGCAGGAGAGCAGCAGGAGGGCGTCCGTaGGCTTGCTGGGGTGCACGGTTTCCAATAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: ADGGRRAAGGRP*ACWGARFPIAH Trigger: GTGTGCTATTGGAAACCGTGCACCCCAGCAAGCTCACGGACGCCCTCCTGCTGCTCTCCTGCCTCCATCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| 3UTR GCA 72 bp | GAGAGCAGCAGGAGGGCGTCCGTGAGCTTGCTGGGGTaGACGGTTTCCAATAGCACACGCTGCAAGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: ESSRRASVSLLG*TVSNSTRCKKS Trigger: GGACTTCTTGCAGCGTGTGCTATTGGAAACCGTGCACCCCAGCAAGCTCACGGACGCCCTCCTGCTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGCAGCCACCTTCAGATaGCGCCAGCTCAGGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGAATFR*RQLRPL Trigger: GAGCGGCCTGAGCTGGCGGCATCTGAAGGTGGCTGC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| 3UTR CAA 72 bp | GCCAGCTCAGGCCGCTCGCGCAGGATGCCGTACTCATaGACCAGCTGTTCTGTCAGTGCCGGGTGCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASSGRSRRMPYS*TSCSVSAGCTR Trigger: GCGGGTGCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGAGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGTCATCGTGGGACAGCTaGTGGAGGCAGGAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGSSWDS*WRQESS Trigger: GCTGCTCTCCTGCCTCCATCAGCTGTCCCACGATGA...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR GCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGCACAAGGGAGCCTGCTaGAGGACTGAGCTGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGHKGAC*RTELWG Trigger: ACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTG...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | CTGATGGAGGCAGGAGAGCAGCAGGAGGGCGTCCGTGAGCTTGCTGGGGTGCACGACTGCCACTGTGCCTaGCAGGGGAGCCATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LMEAGEQQEGVRELAGVHDCHCA*QGSHDG Trigger: CCCATCATGGCTCCCCTGGCAGGCACAGTGGCAGTC...GTGCACCCCAGCAAGCTCACGGACGCCCTCCTGCTGCTCTCCTGCCTCCATCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGTTCACAAGGGAGCCTaGTGCAGGACTGAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGVHKGA*CRTELW Trigger: CCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTGAAC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGAACCCCGGGTATCATTaGCTTTGGAGGTGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGNPGYH*LWRWEL Trigger: CAGCTCCCACCTCCAAAGTCAATGATACCCGGGGTT...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR TCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGGATGTTGGAGACAGTaGAGCCGTAGAGACGTACGC | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGGCWRQ*SRRDVR Trigger: GCGTACGTCTCTACGGCTTCACTGTCTCCAACATCC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR GCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGGAGGGCCTGCCGCTaGCTCACCAAGCCCTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPGRACR*LTKPSG Trigger: ACCGGAGGGCTTGGTGAGGCAGCGGCAGGCCCTCCC...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGAGCCAGAGGTGCCAGTaGTACCATCCCCAAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGSQRCQ*YHPQVF Trigger: GAAGACTTGGGGATGGTAGCACTGGCACCTCTGGCT...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCCGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCCCGAAGAGGATGAGGTaGGGGGCGGGGATGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRSRRMPYSLTSCSVSAPKRMR*GAGMGG Trigger: ACCTCCCATCCCCGCCCCGCACCTCATCCTCTTCGG...GGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR CCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGAGACGTACGCGCTCTaGGAAGATGCTGGACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGETYAL*EDAGQD Trigger: ATCCTGTCCAGCATCTTCCCAGAGCGCGTACGTCTC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CCA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCGTGAGCTGGCCAGAGTaGTCCCTGGGGGTACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCVSWPE*SLGVQS Trigger: TGACTGTACCCCCAGGGACCACTCTGGCCAGCTCAC...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR CCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGGGTTTAGGGAGGCCTaGATGATCTTCTCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGGFREA*MIFSGM Trigger: CATCCCAGAGAAGATCATCCAGGCCTCCCTAAACCC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR TCA 90 bp | AGCCACCTTCAGATGCCGCCAGCTCAGGCCGCTCGCGCAGGATGCCGTACTCATGCAGACTTGAGCTCCTaGTTCTCCCGAATGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SHLQMPPAQAARAGCRTHADLSS*FSRMSR Trigger: ACGGCTCATTCGGGAGAATCAGGAGCTCAAGTCTGC...ATGAGTACGGCATCCTGCGCGAGCGGCCTGAGCTGGCGGCATCTGAAGGTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGTGGTCCTGCATAGGCTaGGGTTCCAGAAAAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGWSCIG*GSRKVS Trigger: GGAAACTTTTCTGGAACCTCAGCCTATGCAGGACCA...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGATGTTGGGGAGGGCCTaGCGCTGCCTCACCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPMLGRA*RCLTKP Trigger: GGGCTTGGTGAGGCAGCGGCAGGCCCTCCCCAACAT...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCACTACTCAGAGAGACTaGCACTGTGCCTGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCTTQRD*HCACQG Trigger: CCCCTGGCAGGCACAGTGGCAGTCTCTCTGAGTAGT...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGATGGGACTAGTCATTTaGCTGTTCAGGGGTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGMGLVI*LFRGPV Trigger: TACTGGACCCCTGAACAGTCAAATGACTAGTCCCAT...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACGGGAGGGCCTGCCGCTaGCTCACCAAGCCCTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNGRACR*LTKPSG Trigger: ACCGGAGGGCTTGGTGAGGCAGCGGCAGGCCCTCCC...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCTGCCAGGGGAGCCATaGTGGGGCTGCTCTGAGATA | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPLPGEP*WGCSEI Trigger: TATCTCAGAGCAGCCCCATCATGGCTCCCCTGGCAG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR CCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGTGAGCTGGCCAGAGTaGTCCCTGGGGGTACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPVSWPE*SLGVQS Trigger: TGACTGTACCCCCAGGGACCACTCTGGCCAGCTCAC...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR CCA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGCTGGATGATCTTCTCTaGGATGTTGGAGACAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGLDDLL*DVGDSE Trigger: TTCACTGTCTCCAACATCCCAGAGAAGATCATCCAG...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CCA 90 bp | TCAGGCCGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCTTGTGTGGAGGAGAATaGGGATTGGGCACAGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SGRSRRMPYSLTSCSVSALCGGE*GLGTGR Trigger: CCGACCTGTGCCCAATCCCCATTCTCCTCCACACAA...GGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | GTGAGCTTGCTGGGGTGCACGGTTTCCAATAGCACACGCTGCAAGAAGTCCACCCTCCTTTGCTGCTGCTaGAGCTGGGGGCAGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: VSLLGCTVSNSTRCKKSTLLCCC*SWGQEY Trigger: GTATTCCTGCCCCCAGCTTCAGCAGCAGCAAAGGAG...GGTGGACTTCTTGCAGCGTGTGCTATTGGAAACCGTGCACCCCAGCAAGCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGGACTGCCACTGTGCCTaGCAGGGGAGCCATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQDCHCA*QGSHDG Trigger: CCCATCATGGCTCCCCTGGCAGGCACAGTGGCAGTC...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGACTACTCAGAGAGACTaGCACTGTGCCTGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPTTQRD*HCACQG Trigger: CCCCTGGCAGGCACAGTGGCAGTCTCTCTGAGTAGT...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCAGCTGTTCTGTCAGTaGCGGGTGCACCCGCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQQLFCQ*RVHPPV Trigger: AACGGGCGGGTGCACCCGGCACTGACAGAACAGCTG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCGCTGTGTGAGCGTCTaGCACAGGTCCTCATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPRCVSV*HRSSSN Trigger: GTTGGATGAGGACCTGTGCCAGACGCTCACACAGCG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGCAGACTTGAGCTCCTaGTTCTCCCGAATGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPADLSS*FSRMSR Trigger: ACGGCTCATTCGGGAGAATCAGGAGCTCAAGTCTGC...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR TCA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCATGGGACTAGTCATTTaGCTGTTCAGGGGTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCMGLVI*LFRGPV Trigger: TACTGGACCCCTGAACAGTCAAATGACTAGTCCCAT...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTTTAGGGAGGCCTGGATGATCTTCTCTGGGATGTTGGAGACAGTGAAGCTGCCAGGGGAGCCATaGTGGGGCTGCTCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LGFREAWMIFSGMLETVKLPGEP*WGCSEI Trigger: TATCTCAGAGCAGCCCCATCATGGCTCCCCTGGCAG...CTTCACTGTCTCCAACATCCCAGAGAAGATCATCCAGGCCTCCCTAAACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCATGTCAGCCAGAGGTaGCAGTGCTACCATCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPHVSQR*QCYHPQ Trigger: TTGGGGATGGTAGCACTGGCACCTCTGGCTGACATG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCACAAGGGAGCCTGCTaGAGGACTGAGCTGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQHKGAC*RTELWG Trigger: ACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCCTGATTCTCCCGAATaGGCCGTACCAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPPDSPE*AVPASS Trigger: TGAAGAAGCTGGTACGGCTCATTCGGGAGAATCAGG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCAGAGGCCACCTGCCTaGGTCTTGATCGCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQQRPPA*VLIADL Trigger: CAAGTCTGCGATCAAGACTCAGGCAGGTGGCCTCTG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCTCCTTTGCTGCTGCTaGAGCTGGGGGCAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQLLCCC*SWGQEY Trigger: GTATTCCTGCCCCCAGCTTCAGCAGCAGCAAAGGAG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCTTGGCGTCTCTGGCTaGCCTATGTTGTTTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPLGVSG*PMLFMG Trigger: CCCCATAAACAACATAGGGCAGCCAGAGACGCCAAG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAAGATTGGTGCACCCTTTaGAGGTGGGAGCTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHDAHVTLCERLAQVLIQDWCTL*RWELVL Trigger: CAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATC...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGAGCCTGCTGCAGGACTaGGCTGTGGGGTATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQSLLQD*AVGYST Trigger: TGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCT...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAAAGCCTGCTGCAGGACTaGGCTGTGGGGTATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VHDAHVTLCERLAQVLIQSLLQD*AVGYST Trigger: TGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCT...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGTGGTCCTGCATAGGCTaGGGTTCCAGAAAAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPWSCIG*GSRKVS Trigger: GGAAACTTTTCTGGAACCTCAGCCTATGCAGGACCA...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGGATGCAGAGGCCACCTaGCTGAGTCTTGATCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQDAEAT*LSLDRR Trigger: TCTGCGATCAAGACTCAGGCAGGTGGCCTCTGCATC...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTTTAGGGAGGCCTGGATGATCTTCTCTGGGATGTTGGAGACAGTGAAGGATGCAGAGGCCACCTaGCTGAGTCTTGATCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFREAWMIFSGMLETVKDAEAT*LSLDRR Trigger: TCTGCGATCAAGACTCAGGCAGGTGGCCTCTGCATC...CTTCACTGTCTCCAACATCCCAGAGAAGATCATCCAGGCCTCCCTAAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCATGTCAGCCAGAGGTaGCAGTGCTACCATCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQHVSQR*QCYHPQ Trigger: TTGGGGATGGTAGCACTGGCACCTCTGGCTGACATG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCGCGCTCTGGGAAGATaGTGGACAGGATTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQRALGR*WTGFFG Trigger: ACCGAAGAATCCTGTCCAGCATCTTCCCAGAGCGCG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGTGCAGGACTGAGCTGTaGGGTATTCAACATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPCRTEL*GIQHVS Trigger: GCTGACATGTTGAATACCCCACAGCTCAGTCCTGCA...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCACCCTTGGCGTCTCTaGCTGCCCTATGTTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPHPWRL*LPYVVY Trigger: ATAAACAACATAGGGCAGCCAGAGACGCCAAGGGTG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGCTCTGGGAAGATGCTaGACAGGATTCTTCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPALGRC*TGFFGL Trigger: TAGACCGAAGAATCCTGTCCAGCATCTTCCCAGAGC...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
||
| CDS-3UTR TCA 90 bp | GTTCATGATGCTCACGTAACGCTGTGTGAGCGTCTGGCACAGGTCCTCATCCAACCTGATTCTCCCGAATaGGCCGTACCAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHDAHVTLCERLAQVLIQPDSPE*AVPASS Trigger: TGAAGAAGCTGGTACGGCTCATTCGGGAGAATCAGG...TTGGATGAGGACCTGTGCCAGACGCTCACACAGCGTTACGTGAGCATCATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCTTGGCGTCTCTGGCTaGCCTATGTTGTTTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQLGVSG*PMLFMG Trigger: CCCCATAAACAACATAGGGCAGCCAGAGACGCCAAG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CCA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACGGATGGGAGGTTGTGTaGAGGAGAATGGGGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNGWEVV*RRMGIG Trigger: CCCAATCCCCATTCTCCTCCACACAACCTCCCATCC...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGGATTGGTCAGTTGGTTaGTCATGGAGCATGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQDWSVG*SWSMAQ Trigger: TTGTGCCATGCTCCATGAGCAACCAACTGACCAATC...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CCA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACTGCAGGACTGAGCTGTaGGGTATTCAACATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNCRTEL*GIQHVS Trigger: GCTGACATGTTGAATACCCCACAGCTCAGTCCTGCA...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACGATTGGTCAGTTGGTTaGTCATGGAGCATGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNDWSVG*SWSMAQ Trigger: TTGTGCCATGCTCCATGAGCAACCAACTGACCAATC...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGAGGGCGTCCGTGAGCTaGCTGGGGTGCACGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGRASVS*LGCTVS Trigger: GGAAACCGTGCACCCCAGCAAGCTCACGGACGCCCT...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CAA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGGAATACACCCTGATGTaGGGGAGGGCCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGEYTLM*GRACRC Trigger: GCAGCGGCAGGCCCTCCCCAACATCAGGGTGTATTC...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS TCA 90 bp | CAGGGCTCCTTTGCTGCTGCTGAAGCTGGGGGCAGGAATACACCCTaGTGTTGGGGAGGGCCTGCCGCTGCCTCACCAAGCCCTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSFAAAEAGGRNTP*CWGGPAAASPSPPV Trigger: CACCGGAGGGCTTGGTGAGGCAGCGGCAGGCCCTCCCCAACATCAGGGTGTATTCCTGCCCCCAGCTTCAGCAGCAGCAAAGGAGCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS TCA 90 bp | GAGACTGCCACTGTGCCTGCCAGGGGAGCCATGATGGGGCTGCTCTaGGATACAGCCAGAGGGCCCACCAGCCGGCTGCTTGTTGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETATVPARGAMMGLL*DTARGPTSRLLVVR Trigger: CCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTCAGAGCAGCCCCATCATGGCTCCCCTGGCAGGCACAGTGGCAGTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCCTGAGCAGGGCTCCTTaGCTGCTGCTGAAGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCLSRAP*LLLKLG Trigger: CCCCAGCTTCAGCAGCAGCAAAGGAGCCCTGCTCAG...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGGCACCGGGAGGATGCCGTACTCATaGACCAGCTGTTCTGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AMHNGLQGEVSLGQPGTGRMPYS*TSCSVS Trigger: ACTGACAGAACAGCTGGTCAATGAGTACGGCATCCT...CCCGGTGCCCGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGATTGGTGCACCCTTaGGAGGTGGGAGCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSRRMPYSLTSCSVSAGLVHP*EVGAGP Trigger: AGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCC...GGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCGGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS GCA 90 bp | TGTGGAGGAGAATGGGGATTGGGCACAGGTCGGGTAGGGGATTGGTaGACCCTTTGGAGGTGGGAGCTGGTCCTGCATAGGCTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGEWGLGTGRVGDW*TLWRWELVLHRLRF Trigger: GAACCTCAGCCTATGCAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCCCCTACCCGACCTGTGCCCAATCCCCATTCTCCTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS GCA 90 bp | TGCCTCACCAAGCCCTCCGGTGAACCCGCTGATGCAGAGGCCACCTaGCTGAGTCTTGATCGCAGACTTGAGCTCCTGATTCTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLTKPSGEPADAEAT*LSLDRRLELLILPN Trigger: ATTCGGGAGAATCAGGAGCTCAAGTCTGCGATCAAGACTCAGGCAGGTGGCCTCTGCATCAGCGGGTTCACCGGAGGGCTTGGTGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS TCA 90 bp | CTGGCCAGAGTGGTCCCTGGGGGTACAGTCATGGGACTAGTCATTTaGCTGTTCAGGGGTCCAGTAGAGGGCAAACCCAGAGAACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LARVVPGGTVMGLVI*LFRGPVEGKPRELA Trigger: GGCCAGTTCTCTGGGTTTGCCCTCTACTGGACCCCTGAACAGTCAAATGACTAGTCCCATGACTGTACCCCCAGGGACCACTCTGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS GCA 90 bp | CAGCAGTGGGTTAAGAGTAGCAGCCAGGGGGTTCACAAGGGAGCCTaGTGCAGGACTGAGCTGTGGGGTATTCAACATGTCAGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QQWVKSSSQGVHKGA*CRTELWGIQHVSQR Trigger: CCTCTGGCTGACATGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTGAACCCCCTGGCTGCTACTCTTAACCCACTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS CCA 90 bp | GGTTCCAGAAAAGTTTCCTCGGGTAGGCTCTGCCAGCCGCACCCTTaGCGTCTCTGGCTGCCCTATGTTGTTTATGGGGTTGGGCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSRKVSSGRLCQPHP*RLWLPYVVYGVGHY Trigger: GTAGTGCCCAACCCCATAAACAACATAGGGCAGCCAGAGACGCCAAGGGTGCGGCTGGCAGAGCCTACCCGAGGAAACTTTTCTGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCTGAGCAGGGCTCCTTaGCTGCTGCTGAAGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQLSRAP*LLLKLG Trigger: CCCCAGCTTCAGCAGCAGCAAAGGAGCCCTGCTCAG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACGAATACACCCTGATGTaGGGGAGGGCCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNEYTLM*GRACRC Trigger: GCAGCGGCAGGCCCTCCCCAACATCAGGGTGTATTC...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | CCCACTAGCCTCTCACAGACTAGCTGTTTTGTGTCTCGGGGATTGTCAGGTAACGGCGGGGATGGGAGGTaGTGTGGAGGAGAATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTSLSQTSCFVSRGLSGNGGDGR*CGGEWG Trigger: TCCCCATTCTCCTCCACACAACCTCCCATCCCCGCC...GTTACCTGACAATCCCCGAGACACAAAACAGCTAGTCTGTGAGAGGCTAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGCTGCAACAAGGGTATTaGGCCAGACAGCAGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPLQQGY*ARQQWV Trigger: AACCCACTGCTGTCTGGCCAAATACCCTTGTTGCAG...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACCTTCAGATGCCGCCAGCTCAGGCCGCTCGCGCAGGATGCCGTACTCATAGATTGGCAAACTGGTaGTTCTGCAACAAGGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SHLQMPPAQAARAGCRTHRLANW*FCNKGI Trigger: AATACCCTTGTTGCAGAACAACCAGTTTGCCAATCT...ATGAGTACGGCATCCTGCGCGAGCGGCCTGAGCTGGCGGCATCTGAAGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | CGCTCGCGCAGGATGCCGTACTCATTGACCAGCTGTTCTGTCAGTGCCGGGTGCGAAACTGTAGTAGGATaGGTCAGTTGGTTGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSRRMPYSLTSCSVSAGCETVVG*VSWLLM Trigger: CATGAGCAACCAACTGACCAATCCTACTACAGTTTC...GCACCCGGCACTGACAGAACAGCTGGTCAATGAGTACGGCATCCTGCGCGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCGGGTATCATTGACTTaGGAGGTGGGAGCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQRVSLT*EVGAGP Trigger: AGGACCAGCTCCCACCTCCAAAGTCAATGATACCCG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
||
| CDS-3UTR CAA 90 bp | GAAACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCAGATGAACATAGGTTaGCCGTCATCGTGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETLMAMHNGLQGEVSLGQQMNIG*PSSWDS Trigger: GCTGTCCCACGATGACGGCAAACCTATGTTCATCTG...CTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGGAAACTGTAGTAGGATaGGTCAGTTGGTTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPETVVG*VSWLLM Trigger: CATGAGCAACCAACTGACCAATCCTACTACAGTTTC...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGTTTGTGTCTCGGGGATaGTCAGGTAACTTGTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPFVSRG*SGNLLD Trigger: GTCTAACAAGTTACCTGACAATCCCCGAGACACAAA...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGGCCATGCACAATGGCCTACAGGGTGAAGTGAGCCTGGGCCAGCCGAGATTGGCAAACTGGTaGTTCTGCAACAAGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: TLMAMHNGLQGEVSLGQPRLANW*FCNKGI Trigger: AATACCCTTGTTGCAGAACAACCAGTTTGCCAATCT...CGGCTGGCCCAGGCTCACTTCACCCTGTAGGCCATTGTGCATGGCCATTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS TCA 72 bp | ACTGTGCCTGCCAGGGGAGCCATGATGGGGCTGCTCTaGGATACAGCCAGAGGGCCCACCAGCCGGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TVPARGAMMGLL*DTARGPTSRLL Trigger: AAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTCAGAGCAGCCCCATCATGGCTCCCCTGGCAGGCACAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 90 bp | CAGCCAGAGGGCCCACCAGCCGGCTGCTTGTTGTTAGGGAACCAGTaGAGGTCAGGCCCAGTGAGCTGGCCAGAGTGGTCCCTGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: QPEGPPAGCLLLGNQ*RSGPVSWPEWSLGV Trigger: TACCCCCAGGGACCACTCTGGCCAGCTCACTGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS GCA 72 bp | CAGGAATACACCCTGATGTTGGGGAGGGCCTGCCGCTaGCTCACCAAGCCCTCCGGTGAACCCGCTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: QEYTLMLGRACR*LTKPSGEPADA Trigger: TGCATCAGCGGGTTCACCGGAGGGCTTGGTGAGGCAGCGGCAGGCCCTCCCCAACATCAGGGTGTATTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 72 bp | GGCCCACCAGCCGGCTGCTTGTTGTTAGGGAACCAGTaGAGGTCAGGCCCAGTGAGCTGGCCAGAGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPPAGCLLLGNQ*RSGPVSWPEWS Trigger: GGACCACTCTGGCCAGCTCACTGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 90 bp | TGGGGCTGCTCTGAGATACAGCCAGAGGGCCCACCAGCCGGCTGCTaGTTGTTAGGGAACCAGTTGAGGTCAGGCCCAGTGAGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WGCSEIQPEGPPAGC*LLGNQLRSGPVSWP Trigger: TGGCCAGCTCACTGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTCAGAGCAGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS TCA 72 bp | TTTGCTGCTGCTGAAGCTGGGGGCAGGAATACACCCTaGTGTTGGGGAGGGCCTGCCGCTGCCTCACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FAAAEAGGRNTP*CWGGPAAASPS Trigger: GCTTGGTGAGGCAGCGGCAGGCCCTCCCCAACATCAGGGTGTATTCCTGCCCCCAGCTTCAGCAGCAGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS GCA 72 bp | GAATGGGGATTGGGCACAGGTCGGGTAGGGGATTGGTaGACCCTTTGGAGGTGGGAGCTGGTCCTGCATAGG | + |
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Preference number: 6 (lower is better) Translates to: EWGLGTGRVGDW*TLWRWELVLHR Trigger: CCTATGCAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCCCCTACCCGACCTGTGCCCAATCCCCATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS CCA 72 bp | TTGGGCACAGGTCGGGTAGGGGATTGGTGCACCCTTTaGAGGTGGGAGCTGGTCCTGCATAGGCTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LGTGRVGDWCTL*RWELVLHRLRF Trigger: GAACCTCAGCCTATGCAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCCCCTACCCGACCTGTGCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS CCA 72 bp | GGAGAATGGGGATTGGGCACAGGTCGGGTAGGGGATTaGTGCACCCTTTGGAGGTGGGAGCTGGTCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GEWGLGTGRVGD*CTLWRWELVLH Trigger: ATGCAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCCCCTACCCGACCTGTGCCCAATCCCCATTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS CAA 72 bp | GAGATACAGCCAGAGGGCCCACCAGCCGGCTGCTTGTaGTTAGGGAACCAGTTGAGGTCAGGCCCAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: EIQPEGPPAGCL*LGNQLRSGPVS Trigger: GCTCACTGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 72 bp | AGGAGAATGGGGATTGGGCACAGGTCGGGTAGGGGATaGGTGCACCCTTTGGAGGTGGGAGCTGGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRMGIGHRSGRG*VHPLEVGAGPA Trigger: TGCAGGACCAGCTCCCACCTCCAAAGGGTGCACCAATCCCCTACCCGACCTGTGCCCAATCCCCATTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS GCA 72 bp | TGCTCTGAGATACAGCCAGAGGGCCCACCAGCCGGCTaGTTGTTGTTAGGGAACCAGTTGAGGTCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CSEIQPEGPPAG*LLLGNQLRSGP Trigger: TGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTCAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CCA 72 bp | GGGGTTCACAAGGGAGCCTGCTGCAGGACTGAGCTGTaGGGTATTCAACATGTCAGCCAGAGGTGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GVHKGACCRTEL*GIQHVSQRCQC Trigger: GCACTGGCACCTCTGGCTGACATGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTGAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 72 bp | TCTGAGATACAGCCAGAGGGCCCACCAGCCGGCTGCTaGTTGTTAGGGAACCAGTTGAGGTCAGGCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SEIQPEGPPAGC*LLGNQLRSGPV Trigger: CACTGGGCCTGACCTCAACTGGTTCCCTAACAACAAGCAGCCGGCTGGTGGGCCCTCTGGCTGTATCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 90 bp | GCTGGCCAGAGTGGTCCCTGGGGGTACAGTCATGGGACTAGTCATTaGACTGTTCAGGGGTCCAGTAGAGGGCAAACCCAGAGAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: AGQSGPWGYSHGTSH*TVQGSSRGQTQRTG Trigger: GCCAGTTCTCTGGGTTTGCCCTCTACTGGACCCCTGAACAGTCAAATGACTAGTCCCATGACTGTACCCCCAGGGACCACTCTGGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS TCA 72 bp | GCACCCTTTGGAGGTGGGAGCTGGTCCTGCATAGGCTaGGGTTCCAGAAAAGTTTCCTCGGGTAGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: APFGGGSWSCIG*GSRKVSSGRLC Trigger: GCAGAGCCTACCCGAGGAAACTTTTCTGGAACCTCAGCCTATGCAGGACCAGCTCCCACCTCCAAAGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230221.2 |
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| CDS GCA 72 bp | AAGCCCTCCGGTGAACCCGCTGATGCAGAGGCCACCTaGCTGAGTCTTGATCGCAGACTTGAGCTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: KPSGEPADAEAT*LSLDRRLELLI Trigger: AATCAGGAGCTCAAGTCTGCGATCAAGACTCAGGCAGGTGGCCTCTGCATCAGCGGGTTCACCGGAGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS TCA 72 bp | GAGACTGTTCCATCACGCGTGAACCCCGGGTATCATTaGCTTTGGAGGTGGGAGCTGGTCCTGCATAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ETVPSRVNPGYH*LWRWELVLHRL Trigger: CAGCCTATGCAGGACCAGCTCCCACCTCCAAAGTCAATGATACCCGGGGTTCACGCGTGATGGAACAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074173.4 |
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| CDS GCA 72 bp | AAGAGTAGCAGCCAGGGGGTTCACAAGGGAGCCTGCTaGAGGACTGAGCTGTGGGGTATTCAACATGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSSSQGVHKGAC*RTELWGIQHVS Trigger: GCTGACATGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTGAACCCCCTGGCTGCTACTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS GCA 72 bp | GTTAAGAGTAGCAGCCAGGGGGTTCACAAGGGAGCCTaGTGCAGGACTGAGCTGTGGGGTATTCAACATGTC | + |
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Preference number: 6 (lower is better) Translates to: VKSSSQGVHKGA*CRTELWGIQHV Trigger: GACATGTTGAATACCCCACAGCTCAGTCCTGCAGCAGGCTCCCTTGTGAACCCCCTGGCTGCTACTCTTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS TCA 72 bp | TGCCCTATGTTGTTTATGGGGTTGGGCACTACGTTCTaGGCAACACCTAGAGGGGTAGCTGTGGAGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CPMLFMGLGTTF*ATPRGVAVEES Trigger: GCTCTCCTCCACAGCTACCCCTCTAGGTGTTGCTCAGAACGTAGTGCCCAACCCCATAAACAACATAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CCA 72 bp | GTTGTTCTGCAACAAGGGTATTTGGCCAGACAGCAGTaGGTTAAGAGTAGCAGCCAGGGGGTTCACAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VVLQQGYLARQQ*VKSSSQGVHKG Trigger: TCCCTTGTGAACCCCCTGGCTGCTACTCTTAACCCACTGCTGTCTGGCCAAATACCCTTGTTGCAGAACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CCA 72 bp | AGATTGGCAAACTGGTTGTTCTGCAACAAGGGTATTTaGCCAGACAGCAGTGGGTTAAGAGTAGCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RLANWLFCNKGI*PDSSGLRVAAR Trigger: CCTGGCTGCTACTCTTAACCCACTGCTGTCTGGCCAAATACCCTTGTTGCAGAACAACCAGTTTGCCAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 90 bp | GTAGTAGGATTGGTCAGTTGGTTGCTCATGGAGCATGGCACAAGATaGGCAAACTGGTTGTTCTGCAACAAGGGTATTTGGCCAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: VVGLVSWLLMEHGTR*ANWLFCNKGIWPDS Trigger: GCTGTCTGGCCAAATACCCTTGTTGCAGAACAACCAGTTTGCCAATCTTGTGCCATGCTCCATGAGCAACCAACTGACCAATCCTACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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| CDS CAA 72 bp | TTGGTCAGTTGGTTGCTCATGGAGCATGGCACAAGATaGGCAAACTGGTTGTTCTGCAACAAGGGTATTTGG | + |
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Preference number: 6 (lower is better) Translates to: LVSWLLMEHGTR*ANWLFCNKGIW Trigger: CCAAATACCCTTGTTGCAGAACAACCAGTTTGCCAATCTTGTGCCATGCTCCATGAGCAACCAACTGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074173.4 ENSMUST00000230221.2 |
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