Pregenerated sensors for SPATA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021007Ensembl transcript IDs: ENSMUST00000048402.12, ENSMUST00000101144.10, ENSMUST00000101146.4
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGAGGGCTACCTGGAACTaGTGGGCACTCCGAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPERATWN*WALRGR Trigger: GCGGCCTCGGAGTGCCCACCAGTTCCAGGTAGCCCT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGGGAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEGEDRG*SDSPAA Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTCCCC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCGCCTGTCGCAGCCATaGCCACAGCCTGAGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPERLSQP*PQPECL Trigger: CAGACACTCAGGCTGTGGGCATGGCTGCGACAGGCG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGATGTCCAGGGCCTCCTaGTACTGCTGGCGCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEMSRAS*YCWRSW Trigger: CCACGAGCGCCAGCAGTACCAGGAGGCCCTGGACAT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEGQRLL*LSGCHP Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGCCATGCCCACAGCCTaGGTGTCTGGATGGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEAMPTA*VSGWRG Trigger: ACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGAGAGGTGCTGGCATaGTTCTGGGTGCCACTCATG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEGEVLA*FWVPLM Trigger: CATGAGTGGCACCCAGAAGCATGCCAGCACCTCTCC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTGGATGGAGAGGTGCTaGCATGCTTCTGGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEWMERC*HASGCH Trigger: GTGGCACCCAGAAGCATGCCAGCACCTCTCCATCCA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCACAGCCTGAGTGTCTaGATGGAGAGGTGCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEHSLSV*MERCWH Trigger: ATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTCAGGCAGACTTAGATaGAGTCCCTCGGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPESGRLR*SPSEEG Trigger: CCCTTCTTCCGAGGGACTGCATCTAAGTCTGCCTGA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGTAGTAGCGGTACTGTaGCAGGAAGGACTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEVVAVL*QEGLCF Trigger: GAAGCAAAGTCCTTCCTGTCACAGTACCGCTACTAC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTGGTTCTTGACCAGCTaGAGGGTGCTTAGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEWFLTS*RVLSLR Trigger: TCTCAGACTAAGCACCCTGCAGCTGGTCAAGAACCA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGATGGGGACAGTGATGTaGTCAGACAACAGAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEMGTVM*SDNRVP Trigger: GGGAACTCTGTTGTCTGAGCACATCACTGTCCCCAT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTCCTGTAAACAAGCATaGAGGGCTGTATCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPESCKQA*RAVSGE Trigger: CTCCCCAGATACAGCCCTCCATGCTTGTTTACAGGA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCTGGAGAAAACTCTGTaGAGAGCTTACAGGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPELEKTL*RAYRMP Trigger: GGGCATCCTGTAAGCTCTCCACAGAGTTTTCTCCAG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGAGTGAATGGCGACTaGTTGTTAGAGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEGVNGD*LLEKRS Trigger: TGACCTCTTCTCTAACAAGCAGTCGCCATTCACTCC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTCTATGAACACATCCTaGTCTTGTGGTTCCCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPESMNTS*SCGSPE Trigger: CTCAGGGGAACCACAAGACCAGGATGTGTTCATAGA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGACAACAGAGTTCCCTaGAAGTCTCAGCCCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEDNRVP*KSQPFQ Trigger: TTGAAAGGGCTGAGACTTCCAGGGAACTCTGTTGTC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCCTCGGAAGAAGGGATaGGTGACTTTGAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEPRKKG*VTLKMM Trigger: CATCATTTTCAAAGTCACTCATCCCTTCTTCCGAGG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGAGAAGAGGAATCAGTaGAAAAAGCGTTGCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEEKRNQ*KKRCSW Trigger: CCAAGAGCAACGCTTTTTGCACTGATTCCTCTTCTC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGAGAAGAGGTCAGAGTaGTTTTCCAACAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEEKRSE*FSNRSP Trigger: TGGAGATCTGTTGGAAAAGCACTCTGACCTCTTCTC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGTCTTCCTCAGATATaGAGCCTAAGTCAACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEGLPQI*SLSQPS Trigger: TGAAGGTTGACTTAGGCTGCATATCTGAGGAAGACC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCTGCTTAATTCAGTTTaGGTTTCAGCTTCCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPELLNSV*VSASIR Trigger: GCGGATGGAAGCTGAAACCCAAACTGAATTAAGCAG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGAATCCTTTCTTCTTTTaGCAGGTGTGTAGTAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPENPFFF*QVCSSG Trigger: ACCGCTACTACACACCTGCCAAAAGAAGAAAGGATT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTTGTCATTTCTTCTATaGACACATCCTGGTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPELSFLL*THPGLV Trigger: CACAAGACCAGGATGTGTTCATAGAAGAAATGACAA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGAATTATAACACCCTCTaGATGCTTGACTTTATGGGC | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPENYNTL*MLDFMG Trigger: GCCCATAAAGTCAAGCATTCAGAGGGTGTTATAATT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGATAATTCCTTACCATaGTTACTGCCACCATTGATG | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEDNSLP*LLPPLM Trigger: CATCAATGGTGGCAGTAATCATGGTAAGGAATTATC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGAGTCCACTGCGGCTTTaGCTGAAAGGATTTTATTAT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPESPLRL*LKGFYY Trigger: ATAATAAAATCCTTTCAGCCAAAGCCGCAGTGGACT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS-3UTR CCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGATGTTTTTGCTTTGCTaGGTCTTCCTCAGATATGCA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEMFLLC*VFLRYA Trigger: TGCATATCTGAGGAAGACCCAGCAAAGCAAAAACAT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR TCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTTCCATCCGCTGATCTaGAAAATCCTTTCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEFHPLI*KILSSF Trigger: AAAAGAAGAAAGGATTTTTCAGATCAGCGGATGGAA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGAAATGTTTTTGCTTTaGTGGGTCTTCCTCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEEMFLL*WVFLRY Trigger: ATATCTGAGGAAGACCCAGCAAAGCAAAAACATTTC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR GCA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGATTCTGAAATGTTTTTaGTTTGCTGGGTCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KVILSYWPHGVFINVDPEILKCF*FAGSSS Trigger: TGAGGAAGACCCAGCAAAGCAAAAACATTTCAGAAT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS TCA 90 bp | CTGGTGGGCACTCCGAGGCCGCCTGTCGCAGCCATGCCCACAGCCTaGGTGTCTGGATGGAGAGGTGCTGGCATGCTTCTGGGTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: LVGTPRPPVAAMPTA*VSGWRGAGMLLGAT Trigger: AGTGGCACCCAGAAGCATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGCTGCGACAGGCGGCCTCGGAGTGCCCACCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS GCA 90 bp | GCTACCTGGAACTGGTGGGCACTCCGAGGCCGCCTGTCGCAGCCATaGCCACAGCCTGAGTGTCTGGATGGAGAGGTGCTGGCATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ATWNWWALRGRLSQP*PQPECLDGEVLACF Trigger: GAAGCATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGCTGCGACAGGCGGCCTCGGAGTGCCCACCAGTTCCAGGTAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS CCA 90 bp | CACTGCGGCGTTGCTCTTGGTGCTCAGGTGTCCTGTAAACAAGCATaGAGGGCTGTATCTGGGGAGGACAGAGGTTGCTCTGACTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: HCGVALGAQVSCKQA*RAVSGEDRGCSDSP Trigger: CGGAGAGTCAGAGCAACCTCTGTCCTCCCCAGATACAGCCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCCGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101146.4 |
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| CDS GCA 90 bp | CAGCCATGCCCACAGCCTGAGTGTCTGGATGGAGAGGTGCTGGCATaGTTCTGGGTGCCACTCATGAGCATCTTACTTGATTCAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: QPCPQPECLDGEVLA*FWVPLMSILLDSGR Trigger: TCTGCCTGAATCAAGTAAGATGCTCATGAGTGGCACCCAGAAGCATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS CCA 90 bp | GCAAAAAGCGTTGCTCTTGGTGCTCAGGTGTCCTGTAAACAAGCATaGAGGGCTGTATCTGGGGAGGACAGAGGTTGCTCTGACTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: AKSVALGAQVSCKQA*RAVSGEDRGCSDSP Trigger: CGGAGAGTCAGAGCAACCTCTGTCCTCCCCAGATACAGCCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS GCA 90 bp | GTTCGTGGAGTGAATGGCGACTGCTTGTTAGAGAAGAGGTCAGAGTaGTTTTCCAACAGATCTCCACTTGGGGTCTTGGCGAGGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: VRGVNGDCLLEKRSE*FSNRSPLGVLARAT Trigger: GGTAGCCCTCGCCAAGACCCCAAGTGGAGATCTGTTGGAAAAGCACTCTGACCTCTTCTCTAACAAGCAGTCGCCATTCACTCCACGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS TCA 90 bp | ATTACTGCCACCATTGATGCTGGGGAATGGACCAGATGGGGACAGTaGTGTGCTCAGACAACAGAGTTCCCTGGAAGTCTCAGCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ITATIDAGEWTRWGQ*CAQTTEFPGSLSPF Trigger: GAAAGGGCTGAGACTTCCAGGGAACTCTGTTGTCTGAGCACATCACTGTCCCCATCTGGTCCATTCCCCAGCATCAATGGTGGCAGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS GCA 90 bp | TGGGTGCCACTCATGAGCATCTTACTTGATTCAGGCAGACTTAGATaGAGTCCCTCGGAAGAAGGGATGAGTGACTTTGAAAATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: WVPLMSILLDSGRLR*SPSEEGMSDFENDG Trigger: CCCATCATTTTCAAAGTCACTCATCCCTTCTTCCGAGGGACTGCATCTAAGTCTGCCTGAATCAAGTAAGATGCTCATGAGTGGCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS TCA 90 bp | AGCTTACAGGATGCCCTTTCTGAGGACTGCTGCAGAATCCCATCTTaGATACTGTCCCATGCTAAGTTTTGTCCTTGTGAGGGTAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLQDALSEDCCRIPS*ILSHAKFCPCEGKG Trigger: TCCTTTACCCTCACAAGGACAAAACTTAGCATGGGACAGTATTCAAGATGGGATTCTGCAGCAGTCCTCAGAAAGGGCATCCTGTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS TCA 90 bp | TCAATGCTCATTCCCATGATTCGTAGAGTCGATAATTCCTTACCATaGTTACTGCCACCATTGATGCTGGGGAATGGACCAGATGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SMLIPMIRRVDNSLP*LLPPLMLGNGPDGD Trigger: GTCCCCATCTGGTCCATTCCCCAGCATCAATGGTGGCAGTAATCATGGTAAGGAATTATCGACTCTACGAATCATGGGAATGAGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CCA 90 bp | GGGTTTCAGCTTCCATCCGCTGATCTGAAAAATCCTTTCTTCTTTTaGCAGGTGTGTAGTAGCGGTACTGTGACAGGAAGGACTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GFQLPSADLKNPFFF*QVCSSGTVTGRTLL Trigger: AAGCAAAGTCCTTCCTGTCACAGTACCGCTACTACACACCTGCCAAAAGAAGAAAGGATTTTTCAGATCAGCGGATGGAAGCTGAAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS CCA 90 bp | GCTCTTCTTCATCAGAGTAGATTTTACTGTCTGGAGAAAACTCTGTaGAGAGCTTACAGGATGCCCTTTCTGAGGACTGCTGCAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLHQSRFYCLEKTL*RAYRMPFLRTAAES Trigger: GGATTCTGCAGCAGTCCTCAGAAAGGGCATCCTGTAAGCTCTCCACAGAGTTTTCTCCAGACAGTAAAATCTACTCTGATGAAGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS TCA 90 bp | GTTCCCTGGAAGTCTCAGCCCTTTCAAAGTCACTGTCACCTTCAATaGCATCCACAGAGGTTTCCTGGTCTATTACACTATCAGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VPWKSQPFQSHCHLQ*HPQRFPGLLHYQKH Trigger: GTGTTTCTGATAGTGTAATAGACCAGGAAACCTCTGTGGATGTCATTGAAGGTGACAGTGACTTTGAAAGGGCTGAGACTTCCAGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS TCA 90 bp | TCATTCCAGGGTGAGGCTTCATTATCTGTTTCGTCATTGACCTGTTaGATTATAACACCCTCTGAATGCTTGACTTTATGGGCGGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SFQGEASLSVSSLTC*IITPSECLTLWAGI Trigger: AATACCCGCCCATAAAGTCAAGCATTCAGAGGGTGTTATAATTCAACAGGTCAATGACGAAACAGATAATGAAGCCTCACCCTGGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGATAGCCATGTGGTTCTaGACCAGCTGCAGGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEIAMWF*TSCRVL Trigger: AAGCACCCTGCAGCTGGTCAAGAACCACATGGCTAT...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
||
| CDS CCA 90 bp | TTTTCACACCGTGCCAACTCCTTCCTCAGTTTTTCTCTTCGTTGTTaGTCAGCATATTTGATGCTAGTATTCACACTTACTGGAATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSHRANSFLSFSLRC*SAYLMLVFTLTGIE Trigger: CTCAATTCCAGTAAGTGTGAATACTAGCATCAAATATGCTGACCAACAACGAAGAGAAAAACTGAGGAAGGAGTTGGCACGGTGTGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCAAAAAGCGTTGCTCTaGGTGCTCAGGTGTCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEQKALL*VLRCPV Trigger: TACAGGACACCTGAGCACCAAGAGCAACGCTTTTTG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
||
| CDS CCA 90 bp | TTTGAAAATGATGGGTATCTTGTCATTTCTTCTATGAACACATCCTaGTCTTGTGGTTCCCCTGAGGGCTTCTGTAGAGAATTTACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FENDGYLVISSMNTS*SCGSPEGFCREFTK Trigger: CTTTGTAAATTCTCTACAGAAGCCCTCAGGGGAACCACAAGACCAGGATGTGTTCATAGAAGAAATGACAAGATACCCATCATTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS CCA 90 bp | CTTTCAAAGTCACTGTCACCTTCAATGACATCCACAGAGGTTTCCTaGTCTATTACACTATCAGAAACACTTGGATTGTTTTCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSLSPSMTSTEVS*SITLSETLGLFSFQ Trigger: CTGGAATGAAAACAATCCAAGTGTTTCTGATAGTGTAATAGACCAGGAAACCTCTGTGGATGTCATTGAAGGTGACAGTGACTTTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCAGTCCACTGCGGCTTaGGCTGAAAGGATTTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEQSTAA*AERILL Trigger: TAATAAAATCCTTTCAGCCAAAGCCGCAGTGGACTG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGGTAAAGGAGCTATTTaGTCTTCAGCACCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEGKGAI*SSAPFL Trigger: GAGAAATGGTGCTGAAGACAAAATAGCTCCTTTACC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCATTCTGAAATGTTTTaGCTTTGCTGGGTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEHSEMF*LCWVFL Trigger: GAGGAAGACCCAGCAAAGCAAAAACATTTCAGAATG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTCAGAAACACTTGGATaGTTTTCATTCCAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPESETLG*FSFQGE Trigger: CTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS TCA 90 bp | GTCTATTACACTATCAGAAACACTTGGATTGTTTTCATTCCAGGGTaGGGCTTCATTATCTGTTTCGTCATTGACCTGTTGAATTATAAC | + |
|
Preference number: 5 (lower is better) Translates to: VYYTIRNTWIVFIPG*GFIICFVIDLLNYN Trigger: GTTATAATTCAACAGGTCAATGACGAAACAGATAATGAAGCCTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGATAGTGTAATAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGGTGACAGGAAGGACTTaGCTTCTGTTTTTAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEVTGRT*LLFLKF Trigger: GAACTTTAAAAACAGAAGCAAAGTCCTTCCTGTCAC...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCACTATCAGAAACACTaGGATTGTTTTCATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEHYQKH*DCFHSR Trigger: CCTGGAATGAAAACAATCCAAGTGTTTCTGATAGTG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGTGTTGGTCAGCATATTaGATGCTAGTATTCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPECWSAY*MLVFTL Trigger: AAGTGTGAATACTAGCATCAAATATGCTGACCAACA...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS-3UTR CAA 90 bp | AAAGTAATATTGAGTTACTGGCCACATGGAGTGTTTATTAATGTAGATCCAGAGCAGTTTTTCTCTTCGTaGTTGGTCAGCATATTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVILSYWPHGVFINVDPEQFFSS*LVSIFD Trigger: ATCAAATATGCTGACCAACAACGAAGAGAAAAACTG...CTCTGGATCTACATTAATAAACACTCCATGTGGCCAGTAACTCAATATTACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS CCA 72 bp | TCTCCACTTGGGGTCTTGGCGAGGGCTACCTGGAACTaGTGGGCACTCCGAGGCCGCCTGTCGCAGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLGVLARATWN*WALRGRLSQPC Trigger: GCATGGCTGCGACAGGCGGCCTCGGAGTGCCCACCAGTTCCAGGTAGCCCTCGCCAAGACCCCAAGTGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS GCA 72 bp | AACTGGTGGGCACTCCGAGGCCGCCTGTCGCAGCCATaGCCACAGCCTGAGTGTCTGGATGGAGAGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NWWALRGRLSQP*PQPECLDGEVL Trigger: CAGCACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGCTGCGACAGGCGGCCTCGGAGTGCCCACCAGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS TCA 72 bp | ACTCCGAGGCCGCCTGTCGCAGCCATGCCCACAGCCTaGGTGTCTGGATGGAGAGGTGCTGGCATGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TPRPPVAAMPTA*VSGWRGAGMLL Trigger: CAGAAGCATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTGGGCATGGCTGCGACAGGCGGCCTCGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS GCA 72 bp | CCACAGCCTGAGTGTCTGGATGGAGAGGTGCTGGCATaGTTCTGGGTGCCACTCATGAGCATCTTACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQPECLDGEVLA*FWVPLMSILLD Trigger: ATCAAGTAAGATGCTCATGAGTGGCACCCAGAAGCATGCCAGCACCTCTCCATCCAGACACTCAGGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS CCA 72 bp | GTTGCTCTTGGTGCTCAGGTGTCCTGTAAACAAGCATaGAGGGCTGTATCTGGGGAGGACAGAGGTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VALGAQVSCKQA*RAVSGEDRGCS Trigger: AGAGCAACCTCTGTCCTCCCCAGATACAGCCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CCA 72 bp | CCTGAGTGTCTGGATGGAGAGGTGCTGGCATGCTTCTaGGTGCCACTCATGAGCATCTTACTTGATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PECLDGEVLACF*VPLMSILLDSG Trigger: GCCTGAATCAAGTAAGATGCTCATGAGTGGCACCCAGAAGCATGCCAGCACCTCTCCATCCAGACACTCAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | CTTACTGGAATTGAGCAGTCCACTGCGGCGTTGCTCTaGGTGCTCAGGTGTCCTGTAAACAAGCATGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGIEQSTAALL*VLRCPVNKHGG Trigger: CCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCCGCAGTGGACTGCTCAATTCCAGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101146.4 |
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| CDS TCA 72 bp | ACCATTGATGCTGGGGAATGGACCAGATGGGGACAGTaGTGTGCTCAGACAACAGAGTTCCCTGGAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TIDAGEWTRWGQ*CAQTTEFPGSL Trigger: GAGACTTCCAGGGAACTCTGTTGTCTGAGCACATCACTGTCCCCATCTGGTCCATTCCCCAGCATCAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 90 bp | TGCAGGGTGCTTAGTCTGAGAGAAGAGGAATCAGTGCAAAAAGCGTaGCTCTTGGTGCTCAGGTGTCCTGTAAACAAGCATGGAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRVLSLREEESVQKA*LLVLRCPVNKHGGL Trigger: CAGCCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCTTTTTGCACTGATTCCTCTTCTCTCAGACTAAGCACCCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS TCA 72 bp | ATGTCCAGGGCCTCCTGGTACTGCTGGCGCTCGTGGTaGCTCACTGTTTCTTCATCACTTACAAACTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: MSRASWYCWRSW*LTVSSSLTNSF Trigger: AAATGAGTTTGTAAGTGATGAAGAAACAGTGAGTCACCACGAGCGCCAGCAGTACCAGGAGGCCCTGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | CTGAGAGAAGAGGAATCAGTGCAAAAAGCGTTGCTCTaGGTGCTCAGGTGTCCTGTAAACAAGCATGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LREEESVQKALL*VLRCPVNKHGG Trigger: CCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCTTTTTGCACTGATTCCTCTTCTCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS CAA 72 bp | GCGGGTATTAAAAATTCGCCCGGTAAAGAGAACATCTaGTTTTCGTCCTTCGGCACAGCCGACAGCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGIKNSPGKENI*FSSFGTADSMS Trigger: GGACATGCTGTCGGCTGTGCCGAAGGACGAAAACAAGATGTTCTCTTTACCGGGCGAATTTTTAATACCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 90 bp | GTGCTTAGTCTGAGAGAAGAGGAATCAGTGCAAAAAGCGTTGCTCTaGGTGCTCAGGTGTCCTGTAAACAAGCATGGAGGGCTGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLSLREEESVQKALL*VLRCPVNKHGGLYL Trigger: CAGATACAGCCCTCCATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCTTTTTGCACTGATTCCTCTTCTCTCAGACTAAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
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| CDS TCA 72 bp | GATGCCCTTTCTGAGGACTGCTGCAGAATCCCATCTTaGATACTGTCCCATGCTAAGTTTTGTCCTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DALSEDCCRIPS*ILSHAKFCPCE Trigger: CTCACAAGGACAAAACTTAGCATGGGACAGTATTCAAGATGGGATTCTGCAGCAGTCCTCAGAAAGGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS TCA 72 bp | AGAAAACTCTGTGGAGAGCTTACAGGATGCCCTTTCTaGGGACTGCTGCAGAATCCCATCTTGAATACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKLCGELTGCPF*GLLQNPILNTV Trigger: GACAGTATTCAAGATGGGATTCTGCAGCAGTCCTCAGAAAGGGCATCCTGTAAGCTCTCCACAGAGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CCA 72 bp | CTTCCATCCGCTGATCTGAAAAATCCTTTCTTCTTTTaGCAGGTGTGTAGTAGCGGTACTGTGACAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSADLKNPFFF*QVCSSGTVTGR Trigger: CCTTCCTGTCACAGTACCGCTACTACACACCTGCCAAAAGAAGAAAGGATTTTTCAGATCAGCGGATGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS GCA 72 bp | CTCATGAGCATCTTACTTGATTCAGGCAGACTTAGATaGAGTCCCTCGGAAGAAGGGATGAGTGACTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LMSILLDSGRLR*SPSEEGMSDFE Trigger: TTCAAAGTCACTCATCCCTTCTTCCGAGGGACTGCATCTAAGTCTGCCTGAATCAAGTAAGATGCTCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS CCA 72 bp | GATGGGTATCTTGTCATTTCTTCTATGAACACATCCTaGTCTTGTGGTTCCCCTGAGGGCTTCTGTAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DGYLVISSMNTS*SCGSPEGFCRE Trigger: TTCTCTACAGAAGCCCTCAGGGGAACCACAAGACCAGGATGTGTTCATAGAAGAAATGACAAGATACCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS CCA 72 bp | CATCAGAGTAGATTTTACTGTCTGGAGAAAACTCTGTaGAGAGCTTACAGGATGCCCTTTCTGAGGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HQSRFYCLEKTL*RAYRMPFLRTA Trigger: AGCAGTCCTCAGAAAGGGCATCCTGTAAGCTCTCCACAGAGTTTTCTCCAGACAGTAAAATCTACTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS CCA 72 bp | CAGCAGCTCTTCTTCATCAGAGTAGATTTTACTGTCTaGAGAAAACTCTGTGGAGAGCTTACAGGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QQLFFIRVDFTV*RKLCGELTGCP Trigger: AGGGCATCCTGTAAGCTCTCCACAGAGTTTTCTCCAGACAGTAAAATCTACTCTGATGAAGAAGAGCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | CTTAGTCTGAGAGAAGAGGAATCAGTGCAAAAAGCGTaGCTCTTGGTGCTCAGGTGTCCTGTAAACAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSLREEESVQKA*LLVLRCPVNKH Trigger: ATGCTTGTTTACAGGACACCTGAGCACCAAGAGCAACGCTTTTTGCACTGATTCCTCTTCTCTCAGACTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 |
||
| CDS CAA 90 bp | GCCAACTCCTTCCTCAGTTTTTCTCTTCGTTGTTGGTCAGCATATTaGATGCTAGTATTCACACTTACTGGAATTGAGCAGTCCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ANSFLSFSLRCWSAY*MLVFTLTGIEQSTA Trigger: CGCAGTGGACTGCTCAATTCCAGTAAGTGTGAATACTAGCATCAAATATGCTGACCAACAACGAAGAGAAAAACTGAGGAAGGAGTTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS TCA 72 bp | ATTCCCATGATTCGTAGAGTCGATAATTCCTTACCATaGTTACTGCCACCATTGATGCTGGGGAATGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: IPMIRRVDNSLP*LLPPLMLGNGP Trigger: TGGTCCATTCCCCAGCATCAATGGTGGCAGTAATCATGGTAAGGAATTATCGACTCTACGAATCATGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS GCA 72 bp | GCTTCTGTTTTTAAAGTTCGTGGAGTGAATGGCGACTaGTTGTTAGAGAAGAGGTCAGAGTGCTTTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASVFKVRGVNGD*LLEKRSECFSN Trigger: GTTGGAAAAGCACTCTGACCTCTTCTCTAACAAGCAGTCGCCATTCACTCCACGAACTTTAAAAACAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS TCA 72 bp | ACTTTGAAAATGATGGGTATCTTGTCATTTCTTCTATaGACACATCCTGGTCTTGTGGTTCCCCTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLKMMGILSFLL*THPGLVVPLRA Trigger: AGCCCTCAGGGGAACCACAAGACCAGGATGTGTTCATAGAAGAAATGACAAGATACCCATCATTTTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
||
| CDS TCA 72 bp | AAGTCTCAGCCCTTTCAAAGTCACTGTCACCTTCAATaGCATCCACAGAGGTTTCCTGGTCTATTACACTAT | + |
|
Preference number: 6 (lower is better) Translates to: KSQPFQSHCHLQ*HPQRFPGLLHY Trigger: ATAGTGTAATAGACCAGGAAACCTCTGTGGATGTCATTGAAGGTGACAGTGACTTTGAAAGGGCTGAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS CAA 72 bp | ACACCGTGCCAACTCCTTCCTCAGTTTTTCTCTTCGTaGTTGGTCAGCATATTTGATGCTAGTATTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: TPCQLLPQFFSS*LVSIFDASIHT Trigger: AGTGTGAATACTAGCATCAAATATGCTGACCAACAACGAAGAGAAAAACTGAGGAAGGAGTTGGCACGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
||
| CDS CAA 72 bp | TCTGTTTTTAAAGTTCGTGGAGTGAATGGCGACTGCTaGTTAGAGAAGAGGTCAGAGTGCTTTTCCAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVFKVRGVNGDC*LEKRSECFSNR Trigger: TCTGTTGGAAAAGCACTCTGACCTCTTCTCTAACAAGCAGTCGCCATTCACTCCACGAACTTTAAAAACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048402.12 ENSMUST00000101146.4 |
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| CDS CAA 90 bp | TCCACAGAGGTTTCCTGGTCTATTACACTATCAGAAACACTTGGATaGTTTTCATTCCAGGGTGAGGCTTCATTATCTGTTTCGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: STEVSWSITLSETLG*FSFQGEASLSVSSL Trigger: CAATGACGAAACAGATAATGAAGCCTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGATAGTGTAATAGACCAGGAAACCTCTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS TCA 72 bp | GGTGAGGCTTCATTATCTGTTTCGTCATTGACCTGTTaGATTATAACACCCTCTGAATGCTTGACTTTATGG | + |
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Preference number: 6 (lower is better) Translates to: GEASLSVSSLTC*IITPSECLTLW Trigger: CCATAAAGTCAAGCATTCAGAGGGTGTTATAATTCAACAGGTCAATGACGAAACAGATAATGAAGCCTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS TCA 72 bp | ACTATCAGAAACACTTGGATTGTTTTCATTCCAGGGTaGGGCTTCATTATCTGTTTCGTCATTGACCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: TIRNTWIVFIPG*GFIICFVIDLL Trigger: CAACAGGTCAATGACGAAACAGATAATGAAGCCTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CCA 72 bp | TCACTGTCACCTTCAATGACATCCACAGAGGTTTCCTaGTCTATTACACTATCAGAAACACTTGGATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLSPSMTSTEVS*SITLSETLGLF Trigger: AAACAATCCAAGTGTTTCTGATAGTGTAATAGACCAGGAAACCTCTGTGGATGTCATTGAAGGTGACAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | CAGAGGTTTCCTGGTCTATTACACTATCAGAAACACTaGGATTGTTTTCATTCCAGGGTGAGGCTTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: QRFPGLLHYQKH*DCFHSRVRLHY Trigger: ATAATGAAGCCTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGATAGTGTAATAGACCAGGAAACCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | TTCCTCAGTTTTTCTCTTCGTTGTTGGTCAGCATATTaGATGCTAGTATTCACACTTACTGGAATTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLSFSLRCWSAY*MLVFTLTGIEQ Trigger: CTGCTCAATTCCAGTAAGTGTGAATACTAGCATCAAATATGCTGACCAACAACGAAGAGAAAAACTGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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| CDS CAA 72 bp | GTTTCCTGGTCTATTACACTATCAGAAACACTTGGATaGTTTTCATTCCAGGGTGAGGCTTCATTATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VSWSITLSETLG*FSFQGEASLSV Trigger: AACAGATAATGAAGCCTCACCCTGGAATGAAAACAATCCAAGTGTTTCTGATAGTGTAATAGACCAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048402.12 ENSMUST00000101144.10 ENSMUST00000101146.4 |
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