Pregenerated sensors for SPATA6L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064202Ensembl transcript IDs: ENSMUST00000025872.13, ENSMUST00000160542.9, ENSMUST00000161813.2, ENSMUST00000162110.8, ENSMUST00000164777.8, ENSMUST00000175647.8, ENSMUST00000179171.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGTACAAAACCAAGCGGGAAGAGGTGAAGCCTGTGGGCGATCCTaGGGGGAACGCAACGGAGGTGTCTGTCACCACAGCCATGACAAC | + |
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Preference number: 1 (lower is better) Translates to: AVQNQAGRGEACGRS*GERNGGVCHHSHDN Trigger: GTTGTCATGGCTGTGGTGACAGACACCTCCGTTGCGTTCCCCCCAGGATCGCCCACAGGCTTCACCTCTTCCCGCTTGGTTTTGTACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR GCA 90 bp | TTGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTTGTCATCTaGTTCTCCAAAGGCCACCCAGGGACACCGGATGCCCTCAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LGPSMSQDCLHHLVI*FSKGHPGTPDALKG Trigger: ACCTTTGAGGGCATCCGGTGTCCCTGGGTGGCCTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR GCA 90 bp | GCCCCTGCTCTATTTCATAGTTGTGCGGAAGAACCCTTTCCGCTTTaGCTTGGGTATGGCGCAGGCTCTCCTGACAGCTCTCATGATCTC | + |
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Preference number: 1 (lower is better) Translates to: APALFHSCAEEPFPL*LGYGAGSPDSSHDL Trigger: GAGATCATGAGAGCTGTCAGGAGAGCCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTCCGCACAACTATGAAATAGAGCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | CAATGCTACCTAGTCTCCAGTTGTGCGCTCAGGTGCTGTAATGTGTaGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCCCTGAACTCC | + |
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Preference number: 1 (lower is better) Translates to: QCYLVSSCALRCCNV*TVPSSRLSHASLNS Trigger: GGAGTTCAGGGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACATTACAGCACCTGAGCGCACAACTGGAGACTAGGTAGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | CTACATCCCAAGGTCCTAACCCCTCCTAGTAGCATTCCCTCATCCTaGAGGAGTGAGAAAGAGCTCGAGGATGCTTCTTTGCTCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LHPKVLTPPSSIPSS*RSEKELEDASLLPS Trigger: GGAGGGGAGCAAAGAAGCATCCTCGAGCTCTTTCTCACTCCTCCAGGATGAGGGAATGCTACTAGGAGGGGTTAGGACCTTGGGATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR GCA 90 bp | AGCATCTTGTTGAGAACTTGGGGCCTTCCATGTCACAAGATTGCCTaGATCACCTTGTCATCTGCTTCTCCAAAGGCCACCCAGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: SILLRTWGLPCHKIA*ITLSSASPKATQGH Trigger: GTGTCCCTGGGTGGCCTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTTCTCAACAAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | GGGATGTCAGAAGGCTTCGTACACCCTCGGGGATCTTCTGCCACGTaGACTGAGAAAAAGGCTGGAACCTTTCTTGGAGAAGAGGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: GMSEGFVHPRGSSAT*TEKKAGTFLGEEVD Trigger: ATCAACCTCTTCTCCAAGAAAGGTTCCAGCCTTTTTCTCAGTCCACGTGGCAGAAGATCCCCGAGGGTGTACGAAGCCTTCTGACATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR GCA 90 bp | GGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTaGCTCGTCTTTGGCCTTGTCATTGGGAAAATGGGAGAAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GLYSDGINVLGLIIF*LVFGLVIGKMGEKG Trigger: CCCCTTTTCTCCCATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | AGCGAGGGCTTTCTGGACTCACTTGAATCTACAGGTGGTGGTGGCTaGCTCTTTAAGACAATCCGCTCATCTGGCTCTCGGATAACCTTT | + |
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Preference number: 1 (lower is better) Translates to: SEGFLDSLESTGGGG*LFKTIRSSGSRITF Trigger: AAAGGTTATCCGAGAGCCAGATGAGCGGATTGTCTTAAAGAGCCAGCCACCACCACCTGTAGATTCAAGTGAGTCCAGAAAGCCCTCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR CCA 90 bp | ATGGAGGAGCTTGTTAAGGAGACAAAGCCCCATAAACCTCAGTGGTaGGGGACAAAGTGTTTCCCATGCAGACTTCCCTCGCTGTCGTTT | + |
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Preference number: 1 (lower is better) Translates to: MEELVKETKPHKPQW*GTKCFPCRLPSLSF Trigger: AAACGACAGCGAGGGAAGTCTGCATGGGAAACACTTTGTCCCCCACCACTGAGGTTTATGGGGCTTTGTCTCCTTAACAAGCTCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR TCA 90 bp | ACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTaGTTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATGG | + |
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Preference number: 1 (lower is better) Translates to: TRSWACTQTASMSWA*LSSASSLALSLGKW Trigger: CCATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
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| 3UTR GCA 90 bp | CATGATCTCGTCCAGTTCGGCAACCCTGCCAGTTACATTCCGCTGTaGGGAAGAAAAGAACCAGGTAGACAAGAGGATCACGAGATTTGT | + |
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Preference number: 1 (lower is better) Translates to: HDLVQFGNPASYIPL*GRKEPGRQEDHEIC Trigger: ACAAATCTCGTGATCCTCTTGTCTACCTGGTTCTTTTCTTCCGCACAGCGGAATGTAACTGGCAGGGTTGCCGAACTGGACGAGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | TGGTCTTTCATGGATAGAATTTGTTTCAGAGATAAAGCTGTCCTTTaGGTGAGCTCGGTGGGATGTCAGAAGGCTTCGTACACCCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: WSFMDRICFRDKAVL*VSSVGCQKASYTLG Trigger: CCCGAGGGTGTACGAAGCCTTCTGACATCCCACCGAGCTCACCCAAAGGACAGCTTTATCTCTGAAACAAATTCTATCCATGAAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR CCA 90 bp | ATTTTCACCAAATGGGTTCCCACTGTCCACATGTCTAACCACAAATaGAGGTTTCCTTTCTCCCGGGAACTTGAAGCTTTTCCCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: IFTKWVPTVHMSNHK*RFPFSRELEAFPMV Trigger: AACCATGGGAAAAGCTTCAAGTTCCCGGGAGAAAGGAAACCTCCATTTGTGGTTAGACATGTGGACAGTGGGAACCCATTTGGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR TCA 90 bp | GCCTTTATTTCAAATTCCCTATCCCCTGTAGCTGATTTCACAGATTaGAGAATGGGAGGAAGACTCTTCCCATTACGTGGTGTTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: AFISNSLSPVADFTD*RMGGRLFPLRGVSR Trigger: TCTGGAAACACCACGTAATGGGAAGAGTCTTCCTCCCATTCTTCAATCTGTGAAATCAGCTACAGGGGATAGGGAATTTGAAATAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CCA 90 bp | TCTTCTGGACTTCTTCGAACAGTGCTCCAAATTATTTTCACCAAATaGGTTCCCACTGTCCACATGTCTAACCACAAATGGAGGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SSGLLRTVLQIIFTK*VPTVHMSNHKWRFP Trigger: AGGAAACCTCCATTTGTGGTTAGACATGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTCCAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR TCA 90 bp | TCCTTTGGCTTCTTTTTCCTGTTAGTTGCCTGGACTCTCTGTCCGTaGGATTTTGAGACAGATCTTTCCAATCTACACCTTTCTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: SFGFFFLLVAWTLCP*DFETDLSNLHLSSQ Trigger: TTGTGAAGAAAGGTGTAGATTGGAAAGATCTGTCTCAAAATCTCACGGACAGAGAGTCCAGGCAACTAACAGGAAAAAGAAGCCAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR CCA 90 bp | GAGAATGGCCTGTATCTGCAGATAGAAAGAACAGATAGAAACAAATaGCGTGCCTTTATTTCAAATTCCCTATCCCCTGTAGCTGATTTC | + |
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Preference number: 1 (lower is better) Translates to: ENGLYLQIERTDRNK*RAFISNSLSPVADF Trigger: GAAATCAGCTACAGGGGATAGGGAATTTGAAATAAAGGCACGCCATTTGTTTCTATCTGTTCTTTCTATCTGCAGATACAGGCCATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR TCA 90 bp | GAGATTTTGAGACAGATCTTTCCAATCTACACCTTTCTTCACAAATaGATCTGTTTTTACACGGGAACACACATTCTAGGATGGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: EILRQIFPIYTFLHK*ICFYTGTHILGWLS Trigger: GGACAGCCATCCTAGAATGTGTGTTCCCGTGTAAAAACAGATTCATTTGTGAAGAAAGGTGTAGATTGGAAAGATCTGTCTCAAAATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR TCA 90 bp | GTACTGAAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAGAAGAGGGTGTGCTACCAAGCGGGAAGAGGTaGAGCCTGTGGGCGATCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLKANSWHPFQAGEEGVLPSGKR*SLWAIL Trigger: CAGGATCGCCCACAGGCTTCACCTCTTCCCGCTTGG...TAGCACACCCTCTTCTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCTGAGCAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTACTTTCCGCTTTGCCTTaGGTATGGCGCAGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HCPEQACNPLPHSSAPALLSALP*VWRRLS Trigger: GGAGAGCCTGCGCCATACCCAAGGCAAAGCGGAAAG...TAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTGAAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAGAAGAGGGTGTGCTACCGCCAAAGGGGAGGTaGGAGCCGAACATGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VLKANSWHPFQAGEEGVLPPKGR*EPNMAV Trigger: TACAGCCATGTTCGGCTCCCACCTCCCCTTTGGCGG...TAGCACACCCTCTTCTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CAA 90 bp | TTGAGAACTTGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTaGTCATCTGCTTCTCCAAAGGCCACCCAGGGACACCGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: LRTWGLPCHKIACIT*SSASPKATQGHRMP Trigger: GGGCATCCGGTGTCCCTGGGTGGCCTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CAA 90 bp | CTGCTCTATTTCATAGTTGTGCGGAAGAACCCTTTCCGCTTTGCCTaGGGTATGGCGCAGGCTCTCCTGACAGCTCTCATGATCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLYFIVVRKNPFRFA*GMAQALLTALMISS Trigger: GGACGAGATCATGAGAGCTGTCAGGAGAGCCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTCCGCACAACTATGAAATAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCAGACCTGGGAAGAGGAGGCTTATGCTCCTATGTGGGTCCTTCCTTGGGATGTCAGTGTCTTGCTaGGTGAACTCTTCATCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LLRPGKRRLMLLCGSFLGMSVSC*VNSSSV Trigger: GACGGATGAAGAGTTCACTCAGCAAGACACTGACAT...CCCAAGGAAGGACCCACATAGGAGCATAAGCCTCCTCTTCCCAGGTCTGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR TCA 90 bp | GTACTGAAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAGAAGAGGGTGTGCTACTGTCACCACAGCCATaGCAACAATGTCTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: VLKANSWHPFQAGEEGVLLSPQP*QQCLRT Trigger: TGTTCTCAGACATTGTTGTCATGGCTGTGGTGACAG...TAGCACACCCTCTTCTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTGAAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAGAAGAGGGTGTGCTAGACTTAGCATCTTGTTaGGAACTTGGGGCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VLKANSWHPFQAGEEGVLDLASC*ELGAFH Trigger: ATGGAAGGCCCCAAGTTCTCAACAAGATGCTAAGTC...TAGCACACCCTCTTCTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTATTTCATAGTTGTTGTGCTGCCTGTTGGTaGCACCATCAACATGGACGG | + |
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Preference number: 2 (lower is better) Translates to: QACNPLPHSSAPALFHSCCAACW*HHQHGR Trigger: CCGTCCATGTTGATGGTGGCACCAACAGGCAGCACA...ACAACTATGAAATAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCTTCTCCAAAGGCCACCCAGGGACACCGGATGCCCTCAAAGGTTTTAATTGTCCTGAGCAGGCTTaGAATCCACTCCCTCATAGT | + |
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Preference number: 2 (lower is better) Translates to: ICFSKGHPGTPDALKGFNCPEQA*NPLPHS Trigger: ACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACA...ATTAAAACCTTTGAGGGCATCCGGTGTCCCTGGGTGGCCTTTGGAGAAGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGAGCTCGGTGGGATGTCAGAAGGCTTCGTACACCCTCGGGGATCTTCTGATTATTTTCACCAAATaGGTTCCCACTGTCCACATG | + |
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Preference number: 2 (lower is better) Translates to: WVSSVGCQKASYTLGDLLIIFTK*VPTVHM Trigger: CATGTGGACAGTGGGAACCCATTTGGTGAAAATAAT...CAGAAGATCCCCGAGGGTGTACGAAGCCTTCTGACATCCCACCGAGCTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTAATGGAAAAGACCCAGCAGCAGAAGGCTGACCTGTCTACATCCCAAGGTTCACGAGATTTGTGCTaGCTGTTGGTGCCACCATCA | + |
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Preference number: 2 (lower is better) Translates to: LLMEKTQQQKADLSTSQGSRDLC*LLVPPS Trigger: TGATGGTGGCACCAACAGGCAGCACAAATCTCGTGA...ACCTTGGGATGTAGACAGGTCAGCCTTCTGCTGCTGGGTCTTTTCCATTAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTATTTCATAGTTGTGGATCACGAGATTTGTaGTGCCTGTTGGTGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: QACNPLPHSSAPALFHSCGSRDL*CLLVPP Trigger: TGGTGGCACCAACAGGCAGCACAAATCTCGTGATCC...ACAACTATGAAATAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAATGGAAAAGACCCAGCAGCAGAAGGCTGACCTGTCTACATCCCAAGGTACTTCCTCCCTGCAGTaGGGTGGGAATAAGGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLMEKTQQQKADLSTSQGTSSLQ*GGNKVV Trigger: TACTACCTTATTCCCACCCCACTGCAGGGAGGAAGT...ACCTTGGGATGTAGACAGGTCAGCCTTCTGCTGCTGGGTCTTTTCCATTAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR CAA 90 bp | TACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTaGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: YKIVGLYSDGINVLG*IIFCLVFGLVIGKM Trigger: CATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTAATGTGTGGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCCCTGAACCCTATCCCCTGTAGCTaGTTTCACAGATTGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: CCNVWTVPSSRLSHASLNPIPCS*FHRLKN Trigger: ATTCTTCAATCTGTGAAATCAGCTACAGGGGATAGG...GTTCAGGGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACATTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTTGTCATCTGCTTCAAATATTCCGCAAGCTaGGCCTTTACATGGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: NLGPSMSQDCLHHLVICFKYSAS*AFTWPL Trigger: CAGTGGCCATGTAAAGGCCCAGCTTGCGGAATATTT...GAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTATGCTCCTATGTGGGTCCTTCCTTGGGCACAAAAGACCGAGTATAAGACTGAAGTTTCTGTGTaGAAACTGGCATCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: EAYAPMWVLPWAQKTEYKTEVSV*KLASPW Trigger: CCAAGGAGATGCCAGTTTGCACACAGAAACTTCAGT...CTTATACTCGGTCTTTTGTGCCCAAGGAAGGACCCACATAGGAGCATAAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGTATCAGTCCTTCCTTAAAAGGAAAAGCAAGACGACTTCTGTGTTTCATGAACCCTTTCCGCTTTaGCTTGGGTATGGCGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGYQSFLKRKSKTTSVFHEPFPL*LGYGAG Trigger: GCCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTC...ATGAAACACAGAAGTCGTCTTGCTTTTCCTTTTAAGGAAGGACTGATACCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATAGTCAGCACCATGGATaGCATGTTGGACCTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: CPGLDYLLPRLWPCHWENSQHHG*HVGPDQ Trigger: CTGATCAGGTCCAACATGGCATCCATGGTGCTGACT...ATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTAATGTGTGGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCCCTGAACATAGAAGTTGAAGACTaGGAAATATTCCGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CCNVWTVPSSRLSHASLNIEVED*EIFRKL Trigger: CAGCTTGCGGAATATTTCCCAGTCTTCAACTTCTAT...GTTCAGGGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACATTACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTGAAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAGAAGAGGGTGTGCTAGAACTGATAAGTGGTTaGTTGTGGTACAGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLKANSWHPFQAGEEGVLELISG*LWYSFR Trigger: TCTGAAACTGTACCACAACCAACCACTTATCAGTTC...TAGCACACCCTCTTCTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGAGAAGAGGGTGTGCTAATAAGAGGGTGGGTTGTTGTAAAAACTTGCTCTGTCACAAGATTGCCTaGATCACCTTGTCATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GRRRGCANKRVGCCKNLLCHKIA*ITLSSA Trigger: AGCAGATGACAAGGTGATGCAGGCAATCTTGTGACA...GAGCAAGTTTTTACAACAACCCACCCTCTTATTAGCACACCCTCTTCTCCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACAAAGCCCCATAAACCTCAGTGGTGGGGGACAAAGTGTTTCCCATGCAGACTTCAGAGGGTAGCTTaGTCTTTCATGGATAGAATT | + |
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Preference number: 2 (lower is better) Translates to: ETKPHKPQWWGTKCFPCRLQRVA*SFMDRI Trigger: AATTCTATCCATGAAAGACCAAGCTACCCTCTGAAG...TCTGCATGGGAAACACTTTGTCCCCCACCACTGAGGTTTATGGGGCTTTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAAAGACCGAGTATAAGGTTTGAATTAACAAGGGCTAGGCACCAGGAAGTCATGTCAGTGTCTTGCTaGGTGAACTCTTCATCCGTC | + |
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Preference number: 2 (lower is better) Translates to: HKRPSIRFELTRARHQEVMSVSC*VNSSSV Trigger: GACGGATGAAGAGTTCACTCAGCAAGACACTGACAT...GACTTCCTGGTGCCTAGCCCTTGTTAATTCAAACCTTATACTCGGTCTTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAAGCCCCATAAACCTCAGTGGTGGGGGACAAAGTGTTTCCCATGCAGAACCTTTCTTCACAAATaGATCTGTTTTTACACGGGA | + |
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Preference number: 2 (lower is better) Translates to: ETKPHKPQWWGTKCFPCRTFLHK*ICFYTG Trigger: TCCCGTGTAAAAACAGATTCATTTGTGAAGAAAGGT...TCTGCATGGGAAACACTTTGTCCCCCACCACTGAGGTTTATGGGGCTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTATGCTCCTATGTGGGTCCTTCCTTGGGCACAAAAGACCGAGTATAAGGCTGTCAAGAGAAGATaGTCTTTTCTTCGAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: EAYAPMWVLPWAQKTEYKAVKRR*SFLRKI Trigger: GATCTTTCGAAGAAAAGAGCATCTTCTCTTGACAGC...CTTATACTCGGTCTTTTGTGCCCAAGGAAGGACCCACATAGGAGCATAAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAAAACCAAGTTGATGGTCTTTTCCCAGTTGACTTATCAGGGTATCTCCCACAGGTGACAAGTGAATaGGAGCCCCAGACAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: RENQVDGLFPVDLSGYLPQVTSE*EPQTEF Trigger: AAATTCTGTCTGGGGCTCTCATTCACTTGTCACCTG...TGGGAGATACCCTGATAAGTCAACTGGGAAAAGACCATCAACTTGGTTTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAGAATGGGAGGAAGACTCTTCCCATTACGTGGTGTTTCCAGAAGCAATTCAGTTACATTCCGCTGTaGGGAAGAAAAGAACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LKNGRKTLPITWCFQKQFSYIPL*GRKEPG Trigger: ACCTGGTTCTTTTCTTCCGCACAGCGGAATGTAACT...GAATTGCTTCTGGAAACACCACGTAATGGGAAGAGTCTTCCTCCCATTCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATTGTGAGTATCAAGCCTaGTGTCACTCAGAAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CPGLDYLLPRLWPCHWENCEYQA*CHSESE Trigger: TTCACTTTCTGAGTGACACCAGGCTTGATACTCACA...ATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTAATGGAAAAGACCCAGCAGCAGAAGGCTGACCTGTCTACATCCCAAGGTAAGGTTTTAATTCTCTaGGACTACTGTTCTTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLMEKTQQQKADLSTSQGKVLIL*DYCSWL Trigger: TAACCAAGAACAGTAGTCCCAGAGAATTAAAACCTT...ACCTTGGGATGTAGACAGGTCAGCCTTCTGCTGCTGGGTCTTTTCCATTAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | AACCAAGCGGGAAGAGGTGAAGCCTGTGGGCGATCCTaGGGGGAACGCAACGGAGGTGTCTGTCACCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: NQAGRGEACGRS*GERNGGVCHHS Trigger: GCTGTGGTGACAGACACCTCCGTTGCGTTCCCCCCAGGATCGCCCACAGGCTTCACCTCTTCCCGCTTGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | GCTGGGCCTTTACATGGCCACTGTCCTGAGCAGGCTTaGAATCCACTCCCTCATAGTTCTGCCCCTGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AGPLHGHCPEQA*NPLPHSSAPAL Trigger: TAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACAGTGGCCATGTAAAGGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | CTGCTGCTTGTACACCCCCAAGAGATGGGAGCTCAATaGTACCTAGTCTCCAGTTGTGCGCTCAGGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLVHPQEMGAQ*YLVSSCALRCC Trigger: ACAGCACCTGAGCGCACAACTGGAGACTAGGTAGCATTGAGCTCCCATCTCTTGGGGGTGTACAAGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | CTAGTCTCCAGTTGTGCGCTCAGGTGCTGTAATGTGTaGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVSSCALRCCNV*TVPSSRLSHAS Trigger: GGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACATTACAGCACCTGAGCGCACAACTGGAGACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | TGGTACAGTTTCAGAGGTACCCCGCCAAAGGGGAGGTaGGAGCCGAACATGGCTGTAAATCAAAGCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: WYSFRGTPPKGR*EPNMAVNQSHF Trigger: GAAGTGGCTTTGATTTACAGCCATGTTCGGCTCCCACCTCCCCTTTGGCGGGGTACCTCTGAAACTGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTTGTCATCTGCTTCAGAACCCTTTCCGCTTaGCCTTGGGTATGGCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLGPSMSQDCLHHLVICFRTLSA*PWVWRR Trigger: CCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTCT...GAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | CTTCGTACACCCTCGGGGATCTTCTGCCACGTGGACTaGGAAAAAGGCTGGAACCTTTCTTGGAGAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LRTPSGIFCHVD*EKGWNLSWRRG Trigger: ACCTCTTCTCCAAGAAAGGTTCCAGCCTTTTTCTCAGTCCACGTGGCAGAAGATCCCCGAGGGTGTACGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR GCA 72 bp | GTCCAGTTCGGCAACCCTGCCAGTTACATTCCGCTGTaGGGAAGAAAAGAACCAGGTAGACAAGAGGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: VQFGNPASYIPL*GRKEPGRQEDH Trigger: GTGATCCTCTTGTCTACCTGGTTCTTTTCTTCCGCACAGCGGAATGTAACTGGCAGGGTTGCCGAACTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | CTATTTCATAGTTGTGCGGAAGAACCCTTTCCGCTTTaGCTTGGGTATGGCGCAGGCTCTCCTGACAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFHSCAEEPFPL*LGYGAGSPDSS Trigger: AGAGCTGTCAGGAGAGCCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTCCGCACAACTATGAAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | GACGTTGAGGGGAGGGTAACCGGGACTGTGTCCCTTTaGGGAGTTGGTCAGAATCTTTTTCCTTTGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DVEGRVTGTVSL*GVGQNLFPLAS Trigger: AGAAGCCAAAGGAAAAAGATTCTGACCAACTCCCCAAAGGGACACAGTCCCGGTTACCCTCCCCTCAACGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | GAAGGCTTCGTACACCCTCGGGGATCTTCTGCCACGTaGACTGAGAAAAAGGCTGGAACCTTTCTTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGFVHPRGSSAT*TEKKAGTFLGE Trigger: TTCTCCAAGAAAGGTTCCAGCCTTTTTCTCAGTCCACGTGGCAGAAGATCCCCGAGGGTGTACGAAGCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | GCCGTATCGTTCCCACAGATAATGCCTTCTCAGACCTaGGAAGAGGAGGCTTATGCTCCTATGTGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVSFPQIMPSQT*EEEAYAPMWVL Trigger: AAGGACCCACATAGGAGCATAAGCCTCCTCTTCCCAGGTCTGAGAAGGCATTATCTGTGGGAACGATACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTAATGGAAAAGACCCAGCAGCAGAAGGCTGACCTGTCTACATCCCAAGGTGCCTCGTCTTTGGCCTaGTCATTGGGAAAATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLMEKTQQQKADLSTSQGASSLA*SLGKWE Trigger: CTCCCATTTTCCCAATGACAAGGCCAAAGACGAGGC...ACCTTGGGATGTAGACAGGTCAGCCTTCTGCTGCTGGGTCTTTTCCATTAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | TGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTaGTTATCTTCTGCCTCGTCTTTGGCCTTGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: WACTQTASMSWA*LSSASSLALSL Trigger: CAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | GATAATGCCTTCTCAGACCTGGGAAGAGGAGGCTTATaGTCCTATGTGGGTCCTTCCTTGGGCACAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DNAFSDLGRGGL*SYVGPSLGTKD Trigger: GTCTTTTGTGCCCAAGGAAGGACCCACATAGGAGCATAAGCCTCCTCTTCCCAGGTCTGAGAAGGCATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | GCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATaGTGTTCGAATGTCAGTGTCTTGCTGAGTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ARHQEVNPDNRG*CSNVSVLLSEL Trigger: GAGTTCACTCAGCAAGACACTGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | TTTCTGGACTCACTTGAATCTACAGGTGGTGGTGGCTaGCTCTTTAAGACAATCCGCTCATCTGGCTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: FLDSLESTGGGG*LFKTIRSSGSR Trigger: CCGAGAGCCAGATGAGCGGATTGTCTTAAAGAGCCAGCCACCACCACCTGTAGATTCAAGTGAGTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | TCTCAGACCTGGGAAGAGGAGGCTTATGCTCCTATGTaGGTCCTTCCTTGGGCACAAAAGACCGAGTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQTWEEEAYAPM*VLPWAQKTEYK Trigger: CTTATACTCGGTCTTTTGTGCCCAAGGAAGGACCCACATAGGAGCATAAGCCTCCTCTTCCCAGGTCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | CTTGTTAAGGAGACAAAGCCCCATAAACCTCAGTGGTaGGGGACAAAGTGTTTCCCATGCAGACTTCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVKETKPHKPQW*GTKCFPCRLPS Trigger: CGAGGGAAGTCTGCATGGGAAACACTTTGTCCCCCACCACTGAGGTTTATGGGGCTTTGTCTCCTTAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | AAGGTCCTAACCCCTCCTAGTAGCATTCCCTCATCCTaGAGGAGTGAGAAAGAGCTCGAGGATGCTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KVLTPPSSIPSS*RSEKELEDASL Trigger: CAAAGAAGCATCCTCGAGCTCTTTCTCACTCCTCCAGGATGAGGGAATGCTACTAGGAGGGGTTAGGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATCAAACTGGCATCTCCTaGGTGACTGAGCGAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CPGLDYLLPRLWPCHWENQTGIS*VTERGL Trigger: AAGCCCTCGCTCAGTCACCAAGGAGATGCCAGTTTG...ATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTGATTGCCTGCATCACCTaGTCATCTGCTTCTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DRGPVLRRHQCPGLDYLLIACIT*SSASPK Trigger: CTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAAT...CAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | ATAACAGGGGATGGTGTTCGAATGTCAGTGTCTTGCTaGGTGAACTCTTCATCCGTCATCCGTGTTCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITGDGVRMSVSC*VNSSSVIRVPV Trigger: CACGGGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACACCATCCCCTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | GGGGCAGATTCTGGTGGACTTCTTCAATGCCTTGAGTaGCGCCACCATGAAAATCGTCCAGATCATCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GADSGGLLQCLE*RHHENRPDHHV Trigger: CACATGATGATCTGGACGATTTTCATGGTGGCGTCACTCAAGGCATTGAAGAAGTCCACCAGAATCTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | TCCAGAGAGGTTGGACTTTGTTGCATTTCACAGTACTaGAAGCTAACAGCTGGCACCCTTTCCAGGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SREVGLCCISQY*KLTAGTLSRQE Trigger: CTCCTGCCTGGAAAGGGTGCCAGCTGTTAGCTTTCAGTACTGTGAAATGCAACAAAGTCCAACCTCTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | CTTGTTGAGAACTTGGGGCCTTCCATGTCACAAGATTaGCTGCATCACCTTGTCATCTGCTTCTCCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVENLGPSMSQD*LHHLVICFSKG Trigger: GCCTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTTCTCAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | CCCCCTGCATCCCACTTTAATGAACTGATAAGTGGTTaGTTGTGGTACAGTTTCAGAGGTACCCCGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PPASHFNELISG*LWYSFRGTPPK Trigger: CTTTGGCGGGGTACCTCTGAAACTGTACCACAACCAACCACTTATCAGTTCATTAAAGTGGGATGCAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTAATGGAAAAGACCCAGCAGCAGAAGGCTGACCTGTCTACATCCCAAGGTGACTTCTTCAATGCCTaGAGTGACGCCACCATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLMEKTQQQKADLSTSQGDFFNA*SDATMK Trigger: TTTCATGGTGGCGTCACTCAAGGCATTGAAGAAGTC...ACCTTGGGATGTAGACAGGTCAGCCTTCTGCTGCTGGGTCTTTTCCATTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAGGAAGACTCTTCCCATTACGTGGTGTTTCCAGAAGCAATTCTAGGGTAGATTTGTGCTGCCTGTaGGTGCCACCATCAACATGG | + |
|
Preference number: 3 (lower is better) Translates to: MGGRLFPLRGVSRSNSRVDLCCL*VPPSTW Trigger: CCATGTTGATGGTGGCACCAACAGGCAGCACAAATC...TACCCTAGAATTGCTTCTGGAAACACCACGTAATGGGAAGAGTCTTCCTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | AAGTTTCTGTGTGCAAACTGGCATCTCCTTGGTGACTaGGCGAGGGCTTTCTGGACTCACTTGAATCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KFLCANWHLLGD*ARAFWTHLNLQ Trigger: CTGTAGATTCAAGTGAGTCCAGAAAGCCCTCGCTCAGTCACCAAGGAGATGCCAGTTTGCACACAGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | AGACTTCCCTCGCTGTCGTTTTACTTCTCAGAACTCTaGCTCCCACCATGCTTCAGTACGTTTCCTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLPSLSFYFSEL*LPPCFSTFPWV Trigger: AACCCAAGGAAACGTACTGAAGCATGGTGGGAGTCAGAGTTCTGAGAAGTAAAACGACAGCGAGGGAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR GCA 72 bp | TCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTaGCTCGTCTTTGGCCTTGTCATTGGGAAAATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SDGINVLGLIIF*LVFGLVIGKMG Trigger: TCCCATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | CATAAACCTCAGTGGTGGGGGACAAAGTGTTTCCCATaGAGACTTCCCTCGCTGTCGTTTTACTTCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HKPQWWGTKCFP*RLPSLSFYFSE Trigger: TTCTGAGAAGTAAAACGACAGCGAGGGAAGTCTGCATGGGAAACACTTTGTCCCCCACCACTGAGGTTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | TTGATCCACAGAACAAGACAAAGGAATACAAGATCGTaGGCCTGTACTCAGACGGCATCAATGTCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LIHRTRQRNTRS*ACTQTASMSWA Trigger: AGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTTGTATTCCTTTGTCTTGTTCTGTGGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCCATGCAGACTTCCCTCGCTGTCGTTTTACTTCTCAGAACTCTGACTCCTACGTTTCCTTGGGTTaGATCCACAGAACAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: VSHADFPRCRFTSQNSDSYVSLG*IHRTRQ Trigger: TTGTCTTGTTCTGTGGATCAAACCCAAGGAAACGTA...GGAGTCAGAGTTCTGAGAAGTAAAACGACAGCGAGGGAAGTCTGCATGGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | ATAGAATTTGTTTCAGAGATAAAGCTGTCCTTTGGGTaGGCTCGGTGGGATGTCAGAAGGCTTCGTACACCC | + |
|
Preference number: 3 (lower is better) Translates to: IEFVSEIKLSFG*ARWDVRRLRTP Trigger: GGGTGTACGAAGCCTTCTGACATCCCACCGAGCTCACCCAAAGGACAGCTTTATCTCTGAAACAAATTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CCA 72 bp | TTCCAGGCAGGAGAAGAGGGTGTGCTAATAAGAGGGTaGGTTGTTGTAAAAACTTGCTCCTGCCTTTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FQAGEEGVLIRG*VVVKTCSCLCN Trigger: GTTACAAAGGCAGGAGCAAGTTTTTACAACAACCCACCCTCTTATTAGCACACCCTCTTCTCCTGCCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | AAATGGGTTCCCACTGTCCACATGTCTAACCACAAATaGAGGTTTCCTTTCTCCCGGGAACTTGAAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KWVPTVHMSNHK*RFPFSRELEAF Trigger: AAAAGCTTCAAGTTCCCGGGAGAAAGGAAACCTCCATTTGTGGTTAGACATGTGGACAGTGGGAACCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR GCA 72 bp | AGTGACGCCACCATGAAAATCGTCCAGATCATCATGTaGTACATGCCGATTGGCATTTTGTTCCTAATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDATMKIVQIIM*YMPIGILFLIA Trigger: AGCAATTAGGAACAAAATGCCAATCGGCATGTAGCACATGATGATCTGGACGATTTTCATGGTGGCGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | GCGTGCCTTTATTTCAAATTCCCTATCCCCTGTAGCTaGTTTCACAGATTGAAGAATGGGAGGAAGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ACLYFKFPIPCS*FHRLKNGRKTL Trigger: AAGAGTCTTCCTCCCATTCTTCAATCTGTGAAATCAGCTACAGGGGATAGGGAATTTGAAATAAAGGCACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR CCA 72 bp | CTTCTTCGAACAGTGCTCCAAATTATTTTCACCAAATaGGTTCCCACTGTCCACATGTCTAACCACAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLRTVLQIIFTK*VPTVHMSNHKW Trigger: CCATTTGTGGTTAGACATGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | TTCTTTTTCCTGTTAGTTGCCTGGACTCTCTGTCCGTaGGATTTTGAGACAGATCTTTCCAATCTACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: FFFLLVAWTLCP*DFETDLSNLHL Trigger: AAGGTGTAGATTGGAAAGATCTGTCTCAAAATCTCACGGACAGAGAGTCCAGGCAACTAACAGGAAAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | CAAGGGAAGACACAAATTCTCCAGGTGACAAGTGAATaGGAGCCCCAGACAGAATTTAATCAACAATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGKTQILQVTSE*EPQTEFNQQFL Trigger: TAAGAATTGTTGATTAAATTCTGTCTGGGGCTCTCATTCACTTGTCACCTGGAGAATTTGTGTCTTCCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
||
| 3UTR GCA 72 bp | GGTGTGCTAATAAGAGGGTGGGTTGTTGTAAAAACTTaGTCCTGCCTTTGTAACCTGTGCAACATTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GVLIRGWVVVKT*SCLCNLCNIFK Trigger: TTTAAAAATGTTGCACAGGTTACAAAGGCAGGAGCAAGTTTTTACAACAACCCACCCTCTTATTAGCACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR TCA 72 bp | CAAAAAGAAAGCAAGATGATACTTACTGGGAGACCATaGTTCATACTCTCATTGCTAATGGAAAAGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QKESKMILTGRP*FILSLLMEKTQ Trigger: CTGGGTCTTTTCCATTAGCAATGAGAGTATGAATCATGGTCTCCCAGTAAGTATCATCTTGCTTTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| 3UTR GCA 72 bp | ATTAACTTAGGTTTTCTTCTGGACTTCTTCGAACAGTaGTCCAAATTATTTTCACCAAATGGGTTCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: INLGFLLDFFEQ*SKLFSPNGFPL Trigger: CAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTCCAGAAGAAAACCTAAGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR TCA 72 bp | AGACAGATCTTTCCAATCTACACCTTTCTTCACAAATaGATCTGTTTTTACACGGGAACACACATTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RQIFPIYTFLHK*ICFYTGTHILG Trigger: TCCTAGAATGTGTGTTCCCGTGTAAAAACAGATTCATTTGTGAAGAAAGGTGTAGATTGGAAAGATCTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCCCTGAACTCCCATCCTGCCAGCATTGGAGCTaGTGGGGTGCCCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVDSSQQQAKPCFPELPSCQHWS*WGAPGW Trigger: CCAGCCTGGGGCACCCCAGCAGCTCCAATGCTGGCA...GGATGGGAGTTCAGGGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR GCA 90 bp | GAACCAGGTAGACAAGAGGATCACGAGATTTGTGCTGCCTGTTGGTGCCACCATTGCTGTGGGGCTGCCTaGCGAGGACGTCACCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPGRQEDHEICAACWCHHCCGAA*RGRHPD Trigger: ATCAGGGTGACGTCCTCGGCAGGCAGCCCCACAGCA...ATGGTGGCACCAACAGGCAGCACAAATCTCGTGATCCTCTTGTCTACCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGGTGGTGGTGGCTGGCTCTTTAAGACAATCCGCTCATCTGGCTCTCGGAGTGAGGACGCCAGCCTaGGCTCAGGGAACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVVVAGSLRQSAHLALGVRTPA*AQGTGN Trigger: ATTTCCTGTTCCCTGAGCCCAGGCTGGCGTCCTCAC...TCCGAGAGCCAGATGAGCGGATTGTCTTAAAGAGCCAGCCACCACCACCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCGAATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCCTGCATGCCAAGGTGTaGGGACGCCAGCCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSNVSVLLSELFIRHPCSLHAKV*GRQPGL Trigger: GAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAG...GGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| 3UTR CAA 72 bp | TGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTaGTCATCTGCTTCTCCAAAGGCCACCCAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: WGLPCHKIACIT*SSASPKATQGH Trigger: GTGTCCCTGGGTGGCCTTTGGAGAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCCACAGAACAAGACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGCTGCATGCCAAGGTGTaGGGACGCCAGCCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIHRTRQRNTRSWACTQTLHAKV*GRQPGL Trigger: GAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAG...CGTCTGAGTACAGGCCCACGATCTTGTATTCCTTTGTCTTGTTCTGTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CAA 72 bp | TTCATAGTTGTGCGGAAGAACCCTTTCCGCTTTGCCTaGGGTATGGCGCAGGCTCTCCTGACAGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIVVRKNPFRFA*GMAQALLTALM Trigger: CATGAGAGCTGTCAGGAGAGCCTGCGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTCCGCACAACTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCCAGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGCTGCATGCCAAGGTGTaGGGACGCCAGCCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPQTEFNQQFLPWAQKTELHAKV*GRQPGL Trigger: GAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAG...CTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR GCA 90 bp | CACTGTCCTGAGCAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTAGGCAGCCGTGTTTATTaGGCAACTGAATGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCPEQACNPLPHSSAPALGSRVY*ATEWLG Trigger: TCCAAGCCATTCAGTTGCGCAATAAACACGGCTGCC...TAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR CCA 90 bp | GAATTAACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTGTGAGGACGCCAGCCTaGGCTCAGGGAACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELTRARHQEVNPDNRGWCVRTPA*AQGTGN Trigger: ATTTCCTGTTCCCTGAGCCCAGGCTGGCGTCCTCAC...ACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGTTAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCTGAGCAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTATATCATTGCTGTTGACTaGCTCCTGGACCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLSRLAIHSLIVLPLLYIIAVD*LLDRFR Trigger: CCTGAACCGGTCCAGGAGCCAGTCAACAGCAATGAT...ATAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAGTTCTTGGAGAAGAGGTTaGTTCAGAGGGCTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARHQEVNPDNRGWCSNVSSWRRG*FRGLGG Trigger: ACCTCCCAGCCCTCTGAATCAACCTCTTCTCCAAGA...ACTGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCATTCTGCCACGTGGACTaGGAAAAAGGCTGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRKSTQITGDGVRMSFCHVD*EKGWNL Trigger: AAGGTTCCAGCCTTTTTCTCAGTCCACGTGGCAGAA...TGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR TCA 90 bp | AACTTGGGGCCTTCCATGTCACAAGATTGCCTGCATCACCTTGTCATCTGCTTCCCTGATCATTGCTGTTaGCTGGCTCCTGGACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLGPSMSQDCLHHLVICFPDHCC*LAPGPV Trigger: AACCGGTCCAGGAGCCAGTCAACAGCAATGATCAGG...GAAGCAGATGACAAGGTGATGCAGGCAATCTTGTGACATGGAAGGCCCCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR TCA 90 bp | GAATTAACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCTTGGAGAAGAGGTTaGTTCAGAGGGCTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELTRARHQEVNPDNRGWCSWRRG*FRGLGG Trigger: ACCTCCCAGCCCTCTGAATCAACCTCTTCTCCAAGA...ACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGTTAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATTGGGAAAATGAAATCGCCCGGATTTaGAGCTCCACCACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPGLDYLLPRLWPCHWENEIARI*SSTTTS Trigger: GGAGGTGGTGGTGGAGCTCCAAATCCGGGCGATTTC...ATTTTCCCAATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| 3UTR CAA 72 bp | GTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTaGATTATCTTCTGCCTCGTCTTTGGCCTTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VGLYSDGINVLG*IIFCLVFGLVI Trigger: AATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175647.8 ENSMUST00000179171.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGACTGAAGTTTCTGTGTaGAAACTGGCATCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGTRKSTQITGDGVRMTEVSV*KLASPW Trigger: CCAAGGAGATGCCAGTTTGCACACAGAAACTTCAGT...CATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | CACAAAAGACCGAGTATAAGGTTTGAATTAACAAGGGCTAGGCACCAGGAAGTCGTGAGGACGCCAGCCTaGGCTCAGGGAACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HKRPSIRFELTRARHQEVVRTPA*AQGTGN Trigger: ATTTCCTGTTCCCTGAGCCCAGGCTGGCGTCCTCAC...GACTTCCTGGTGCCTAGCCCTTGTTAATTCAAACCTTATACTCGGTCTTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCGAATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCGTTGATTCAGAGGGCTaGGAGGTCTGGAGAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSNVSVLLSELFIRHPCSVDSEG*EVWRVV Trigger: CACAACTCTCCAGACCTCCCAGCCCTCTGAATCAAC...GGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCCCAGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGGAAATCGCCCGGATTTaGAGCTCCACCACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESPRQNLINNSYLGHKRPEIARI*SSTTTS Trigger: GGAGGTGGTGGTGGAGCTCCAAATCCGGGCGATTTC...CGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTAATGTGTGGACAGTTCCCAGCAGCAGGCTAAGCCATGCTTCCCTGAACTATTGCGCAACTGAATaGCTTGGACCTAAGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCNVWTVPSSRLSHASLNYCATE*LGPKHW Trigger: CCAATGCTTAGGTCCAAGCCATTCAGTTGCGCAATA...GTTCAGGGAAGCATGGCTTAGCCTGCTGCTGGGAACTGTCCACACATTACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAAATCTCATGCTCTGTTaGATCACAACAGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRKSTQITGDGVRMSNLMLC*ITTGNT Trigger: TGTGTTCCCTGTTGTGATTCAACAGAGCATGAGATT...TGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATACTGAAGTTTCTGTGTaGAAACTGGCATCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRARHQEVNPDNRGWCSNTEVSV*KLASPW Trigger: CCAAGGAGATGCCAGTTTGCACACAGAAACTTCAGT...ATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| 3UTR CAA 72 bp | GAAAGGAGAGAAGAGTTCCCAGATACTGCAGCCAGCTaGCCCCCTGCATCCCACTTTAATGAACTGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERREEFPDTAAS*PPASHFNELIS Trigger: ACTTATCAGTTCATTAAAGTGGGATGCAGGGGGCAAGCTGGCTGCAGTATCTGGGAACTCTTCTCTCCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATTTTGGGAGCAATGCCTaGAAACCAAATAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRARHQEVNPDNRGWCSNFGSNA*KPNSCL Trigger: AAGACAGCTATTTGGTTTCCAGGCATTGCTCCCAAA...ATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAGTTTTGGGAGCAATGCCTaGAAACCAAATAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARHQEVNPDNRGWCSNVSFGSNA*KPNSCL Trigger: AAGACAGCTATTTGGTTTCCAGGCATTGCTCCCAAA...ACTGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | CACAAAAGACCGAGTATAAGGTTTGAATTAACAAGGGCTAGGCACCAGGAAGTCGTTGATTCAGAGGGCTaGGAGGTCTGGAGAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKRPSIRFELTRARHQEVVDSEG*EVWRVV Trigger: CACAACTCTCCAGACCTCCCAGCCCTCTGAATCAAC...GACTTCCTGGTGCCTAGCCCTTGTTAATTCAAACCTTATACTCGGTCTTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR TCA 90 bp | GAATTAACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTAATCTCATGCTCTGTTaGATCACAACAGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ELTRARHQEVNPDNRGWCNLMLC*ITTGNT Trigger: TGTGTTCCCTGTTGTGATTCAACAGAGCATGAGATT...ACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGTTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162110.8 ENSMUST00000175647.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATAGCTCCAGGATCTATTaGCTCTTCAAATACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TRARHQEVNPDNRGWCSNSSRIY*LFKYLY Trigger: GTAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCT...ATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGGCTTTACAAATCTCATaGTCTGTTGAATCACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGTRKSTQITGDGVRMALQIS*SVESQQ Trigger: CTGTTGTGATTCAACAGAGCATGAGATTTGTAAAGC...CATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAGTCTTCAGAGGGTAGCTTaGTCTTTCATGGATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ARHQEVNPDNRGWCSNVSLQRVA*SFMDRI Trigger: AATTCTATCCATGAAAGACCAAGCTACCCTCTGAAG...ACTGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAACCAAGTTGATGGTCTTTTCCCAGTTGACTTATCAGGGTATCTCCCATTCTGCCACGTGGACTaGGAAAAAGGCTGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RENQVDGLFPVDLSGYLPFCHVD*EKGWNL Trigger: AAGGTTCCAGCCTTTTTCTCAGTCCACGTGGCAGAA...TGGGAGATACCCTGATAAGTCAACTGGGAAAAGACCATCAACTTGGTTTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
||
| CDS-3UTR TCA 90 bp | AATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCCGTGAGACCTTTCTTCACAAATaGATCTGTTTTTACACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVSVLLSELFIRHPCSRETFLHK*ICFYTG Trigger: TCCCGTGTAAAAACAGATTCATTTGTGAAGAAAGGT...CTCACGGGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR TCA 90 bp | GAATTAACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTACCTTTCTTCACAAATaGATCTGTTTTTACACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELTRARHQEVNPDNRGWCTFLHK*ICFYTG Trigger: TCCCGTGTAAAAACAGATTCATTTGTGAAGAAAGGT...ACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGTTAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | CACAAAAGACCGAGTATAAGGTTTGAATTAACAAGGGCTAGGCACCAGGAAGTCATGTCTAACCACAAATaGAGGTTTCCTTTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HKRPSIRFELTRARHQEVMSNHK*RFPFSR Trigger: CCGGGAGAAAGGAAACCTCCATTTGTGGTTAGACAT...GACTTCCTGGTGCCTAGCCCTTGTTAATTCAAACCTTATACTCGGTCTTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCGAATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCATTATTTTCACCAAATaGGTTCCCACTGTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: CSNVSVLLSELFIRHPCSIIFTK*VPTVHM Trigger: CATGTGGACAGTGGGAACCCATTTGGTGAAAATAAT...GGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| 3UTR CAA 72 bp | AGAACTCTGACTCCCACCATGCTTCAGTACGTTTCCTaGGGTTTGATCCACAGAACAAGACAAAGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: RTLTPTMLQYVS*GLIHRTRQRNT Trigger: TGTATTCCTTTGTCTTGTTCTGTGGATCAAACCCAAGGAAACGTACTGAAGCATGGTGGGAGTCAGAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTGAATTAACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGACCTTTACAAATCTCATaGTCTGTTGAATCACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFELTRARHQEVNPDNRGPLQIS*SVESQQ Trigger: CTGTTGTGATTCAACAGAGCATGAGATTTGTAAAGG...TCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGTTAATTCAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162110.8 |
||
| 3UTR CAA 72 bp | TTAATTAGAAGGCAGTTCCAGAGAGGTTGGACTTTGTaGCATTTCACAGTACTGAAAGCTAACAGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LIRRQFQRGWTL*HFTVLKANSWH Trigger: GTGCCAGCTGTTAGCTTTCAGTACTGTGAAATGCAACAAAGTCCAACCTCTCTGGAACTGCCTTCTAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCCAGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGAGCTCCAGGATCTATTaGCTCTTCAAATACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EPQTEFNQQFLPWAQKTESSRIY*LFKYLY Trigger: GTAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCT...CTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| 3UTR CAA 72 bp | GTCCAGATCATCATGTGCTACATGCCGATTGGCATTTaGTTCCTAATTGCTGGGAAGATCATAGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQIIMCYMPIGI*FLIAGKIIEVE Trigger: TTCAACTTCTATGATCTTCCCAGCAATTAGGAACAAAATGCCAATCGGCATGTAGCACATGATGATCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCCAGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGGACTTCTTCGAACAGTaGTCCAAATTATTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EPQTEFNQQFLPWAQKTEDFFEQ*SKLFSP Trigger: TGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTC...CTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAACCAAGTTGATGGTCTTTTCCCAGTTGACTTATCAGGGTATCTCCCAATTATTTTCACCAAATaGGTTCCCACTGTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: RENQVDGLFPVDLSGYLPIIFTK*VPTVHM Trigger: CATGTGGACAGTGGGAACCCATTTGGTGAAAATAAT...TGGGAGATACCCTGATAAGTCAACTGGGAAAAGACCATCAACTTGGTTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAACCAAGTTGATGGTCTTTTCCCAGTTGACTTATCAGGGTATCTCCCAGACTTCTTCGAACAGTaGTCCAAATTATTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RENQVDGLFPVDLSGYLPDFFEQ*SKLFSP Trigger: TGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTC...TGGGAGATACCCTGATAAGTCAACTGGGAAAAGACCATCAACTTGGTTTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
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| CDS-3UTR CCA 90 bp | TACTGTTTTTCTTGGGCTTTAATAAGGGACTTGATGTCATTTGAGCCTAACATGATGTCTAACCACAAATaGAGGTTTCCTTTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YCFSWALIRDLMSFEPNMMSNHK*RFPFSR Trigger: CCGGGAGAAAGGAAACCTCCATTTGTGGTTAGACAT...CATGTTAGGCTCAAATGACATCAAGTCCCTTATTAAAGCCCAAGAAAAACAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
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| 3UTR CAA 72 bp | AATTTAATTAGAAGGCAGTTCCAGAGAGGTTGGACTTaGTTGCATTTCACAGTACTGAAAGCTAACAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NLIRRQFQRGWT*LHFTVLKANSW Trigger: CCAGCTGTTAGCTTTCAGTACTGTGAAATGCAACAAAGTCCAACCTCTCTGGAACTGCCTTCTAATTAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS-3UTR GCA 90 bp | AGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGTATAAGGGCTGTCAAGAGAAGATaGTCTTTTCTTCGAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RQNLINNSYLGHKRPSIRAVKRR*SFLRKI Trigger: GATCTTTCGAAGAAAAGAGCATCTTCTCTTGACAGC...CCTTATACTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS-3UTR CCA 90 bp | TACTGTTTTTCTTGGGCTTTAATAAGGGACTTGATGTCATTTGAGCCTAACATGCTTCAGAGGGTAGCTTaGTCTTTCATGGATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: YCFSWALIRDLMSFEPNMLQRVA*SFMDRI Trigger: AATTCTATCCATGAAAGACCAAGCTACCCTCTGAAG...CATGTTAGGCTCAAATGACATCAAGTCCCTTATTAAAGCCCAAGAAAAACAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
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| CDS GCA 90 bp | CCTAAGCATTGGGCAGATCGTCACCATCAGCATTACAGCCACCGCTaGCAGCATTGGAGCTGCTGGGGTGCCCCAGGCTGGCCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKHWADRHHQHYSHR*QHWSCWGAPGWPGD Trigger: GTCACCAGGCCAGCCTGGGGCACCCCAGCAGCTCCAATGCTGGCAGCGGTGGCTGTAATGCTGATGGTGACGATCTGCCCAATGCTTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCCACCGCTGCCAGCATaGGAGCTGCTGGGGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DKGIQDRGPVLRRHQCPGPPLPA*ELLGCP Trigger: GGGGCACCCCAGCAGCTCCAATGCTGGCAGCGGTGG...CCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTTGTATTCCTTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS GCA 90 bp | GCAATGCCTGGAAACCAAATAGCTGTCTTCATGAGCACCTCCCTCTaGATGCCAAGGTGTGAGGACGCCAGCCTGGGCTCAGGGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AMPGNQIAVFMSTSL*MPRCEDASLGSGNR Trigger: CCTGTTCCCTGAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAGAGGGAGGTGCTCATGAAGACAGCTATTTGGTTTCCAGGCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025872.13 ENSMUST00000160542.9 ENSMUST00000162110.8 ENSMUST00000164777.8 |
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| CDS TCA 90 bp | CCAAATAGCTGTCTTCATGAGCACCTCCCTCTGCATGCCAAGGTGTaGGGACGCCAGCCTGGGCTCAGGGAACAGGAAATCTCGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PNSCLHEHLPLHAKV*GRQPGLREQEISGV Trigger: AACACCCGAGATTTCCTGTTCCCTGAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAGAGGGAGGTGCTCATGAAGACAGCTATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025872.13 ENSMUST00000160542.9 ENSMUST00000162110.8 ENSMUST00000164777.8 |
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| CDS-3UTR CAA 90 bp | CACTGTCCTGAGCAGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTAGCGCAACTGAATGGCTaGGACCTAAGCATTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCPEQACNPLPHSSAPALAQLNG*DLSIGQ Trigger: CTGCCCAATGCTTAGGTCCAAGCCATTCAGTTGCGC...TAGAGCAGGGGCAGAACTATGAGGGAGTGGATTGCAAGCCTGCTCAGGACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS CCA 90 bp | GGCAGCCGTGTTTATTGCGCAACTGAATGGCTTGGACCTAAGCATTaGGCAGATCGTCACCATCAGCATTACAGCCACCGCTGCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRVYCATEWLGPKH*ADRHHQHYSHRCQH Trigger: ATGCTGGCAGCGGTGGCTGTAATGCTGATGGTGACGATCTGCCCAATGCTTAGGTCCAAGCCATTCAGTTGCGCAATAAACACGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS-3UTR CAA 90 bp | ACAAGGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATAGAAATCGCCCGGATTaGGAGCTCCACCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRARHQEVNPDNRGWCSNRNRPD*ELHHHL Trigger: GAGGTGGTGGTGGAGCTCCAAATCCGGGCGATTTCT...ATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162110.8 ENSMUST00000175647.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGAGTTGTGAGGTGGTAACTGAAGTTTCTGTGTGCAAACTGGCATCTCCTAGAAATCGCCCGGATTaGGAGCTCCACCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LESCEVVTEVSVCKLASPRNRPD*ELHHHL Trigger: GAGGTGGTGGTGGAGCTCCAAATCCGGGCGATTTCT...AGGAGATGCCAGTTTGCACACAGAAACTTCAGTTACCACCTCACAACTCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| CDS-3UTR CAA 90 bp | TGTTCGAATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCAGGTACACAGCTTCCTaGTCCGGCAGGAACACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CSNVSVLLSELFIRHPCSRYTAS*SGRNTP Trigger: CGGAGTGTTCCTGCCGGACAAGGAAGCTGTGTACCT...GGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162110.8 ENSMUST00000175647.8 |
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| CDS-3UTR CAA 90 bp | GAGAGTTGTGAGGTGGTAACTGAAGTTTCTGTGTGCAAACTGGCATCTCCTTGGAGGTACACAGCTTCCTaGTCCGGCAGGAACACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESCEVVTEVSVCKLASPWRYTAS*SGRNTP Trigger: CGGAGTGTTCCTGCCGGACAAGGAAGCTGTGTACCT...CCAAGGAGATGCCAGTTTGCACACAGAAACTTCAGTTACCACCTCACAACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| CDS-3UTR CAA 90 bp | GGGCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAAGGCTGGAACCTTTCTaGGAGAAGAGGTTGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGTRKSTQITGDGVRMSRLEPF*EKRLIQ Trigger: CTGAATCAACCTCTTCTCCAAGAAAGGTTCCAGCCT...TGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS-3UTR CAA 90 bp | GCTAGGCACCAGGAAGTCAACCCAGATAACAGGGGATGGTGTTCGAATGTCAGTAGGCTGGAACCTTTCTaGGAGAAGAGGTTGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARHQEVNPDNRGWCSNVSRLEPF*EKRLIQ Trigger: CTGAATCAACCTCTTCTCCAAGAAAGGTTCCAGCCT...ACTGACATTCGAACACCATCCCCTGTTATCTGGGTTGACTTCCTGGTGCCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS TCA 90 bp | ATAGTAGGCCAACTCTTCCCATGCTTTACAAATCTCATGCTCTGTTaGATCACAACAGGGAACACAGGGGGAAAGCAGTCTGTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVGQLFPCFTNLMLC*ITTGNTGGKQSVSR Trigger: CCTGGAGACAGACTGCTTTCCCCCTGTGTTCCCTGTTGTGATTCAACAGAGCATGAGATTTGTAAAGCATGGGAAGAGTTGGCCTACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175647.8 |
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| CDS CCA 90 bp | TCTTCTGGACTTCTTCGAACAGTGCTCCAAATTATTTTCACCAAATaGGTTCCCACTGTCCACCACAAATGGAGGTTTCCTTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGLLRTVLQIIFTK*VPTVHHKWRFPFSR Trigger: CCGGGAGAAAGGAAACCTCCATTTGTGGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTCCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160542.9 |
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| CDS TCA 90 bp | GGATCTATTGCCTCTTCAAATACCTTTACAAATCTCATGCTCTGTTaGATCACAACAGGGAACACAGGGGGAAAGCAGTCTGTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSIASSNTFTNLMLC*ITTGNTGGKQSVSR Trigger: CCTGGAGACAGACTGCTTTCCCCCTGTGTTCCCTGTTGTGATTCAACAGAGCATGAGATTTGTAAAGGTATTTGAAGAGGCAATAGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162110.8 |
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| CDS GCA 90 bp | CAGCTCCAGGATCTATTGCCTCTTCAAATACCTTTACAAATCTCATaGTCTGTTGAATCACAACAGGGAACACAGGGGGAAAGCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLQDLLPLQIPLQIS*SVESQQGTQGESSL Trigger: CAGACTGCTTTCCCCCTGTGTTCCCTGTTGTGATTCAACAGAGCATGAGATTTGTAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162110.8 |
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| CDS CCA 90 bp | CTCCAAATTATTTTCACCAAATGGGTTCCCACTGTCCACCACAAATaGAGGTTTCCTTTCTCCCGGGAACTTGAAGCTTTTCCCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQIIFTKWVPTVHHK*RFPFSRELEAFPMV Trigger: AACCATGGGAAAAGCTTCAAGTTCCCGGGAGAAAGGAAACCTCCATTTGTGGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160542.9 |
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| CDS-3UTR CAA 90 bp | TGTTCGAATGTCAGTGTCTTGCTGAGTGAACTCTTCATCCGTCATCCGTGTTCCCAGCTCCAGGATCTATaGCCTCTTCAAATACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSNVSVLLSELFIRHPCSQLQDL*PLQIPL Trigger: TAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCTG...GGAACACGGATGACGGATGAAGAGTTCACTCAGCAAGACACTGACATTCGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS-3UTR CAA 90 bp | GAGCCCCAGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGTGTCCCTTTGGGGAGTaGGTCAGAATCTTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPQTEFNQQFLPWAQKTECPFGE*VRIFFL Trigger: AAGGAAAAAGATTCTGACCAACTCCCCAAAGGGACA...CTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS-3UTR CAA 90 bp | AGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGTATAAGGCAAACTGGCATCTCCTaGGTGACTGAGCGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQNLINNSYLGHKRPSIRQTGIS*VTERGL Trigger: AAGCCCTCGCTCAGTCACCAAGGAGATGCCAGTTTG...CCTTATACTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS-3UTR CAA 90 bp | AGAGAAAACCAAGTTGATGGTCTTTTCCCAGTTGACTTATCAGGGTATCTCCCATGTCCCTTTGGGGAGTaGGTCAGAATCTTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RENQVDGLFPVDLSGYLPCPFGE*VRIFFL Trigger: AAGGAAAAAGATTCTGACCAACTCCCCAAAGGGACA...TGGGAGATACCCTGATAAGTCAACTGGGAAAAGACCATCAACTTGGTTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025872.13 |
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| CDS GCA 90 bp | TCAAAGTTTATTAACTTAGGTTTTCTTCTGGACTTCTTCGAACAGTaGTCCAAATTATTTTCACCAAATGGGTTCCCACTGTCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SKFINLGFLLDFFEQ*SKLFSPNGFPLSTT Trigger: TGTGGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAGTCCAGAAGAAAACCTAAGTTAATAAACTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160542.9 |
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| CDS-3UTR CAA 90 bp | AGACAGAATTTAATCAACAATTCTTACCTTGGGCACAAAAGACCGAGTATAAGGCAGCTCCAGGATCTATaGCCTCTTCAAATACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RQNLINNSYLGHKRPSIRQLQDL*PLQIPL Trigger: TAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCTG...CCTTATACTCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025872.13 ENSMUST00000162110.8 |
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| CDS GCA 72 bp | TGGGCAGATCGTCACCATCAGCATTACAGCCACCGCTaGCAGCATTGGAGCTGCTGGGGTGCCCCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WADRHHQHYSHR*QHWSCWGAPGW Trigger: CCAGCCTGGGGCACCCCAGCAGCTCCAATGCTGGCAGCGGTGGCTGTAATGCTGATGGTGACGATCTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179171.2 |
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| CDS GCA 72 bp | GGAAACCAAATAGCTGTCTTCATGAGCACCTCCCTCTaGATGCCAAGGTGTGAGGACGCCAGCCTGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GNQIAVFMSTSL*MPRCEDASLGS Trigger: TGAGCCCAGGCTGGCGTCCTCACACCTTGGCATGCAGAGGGAGGTGCTCATGAAGACAGCTATTTGGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025872.13 ENSMUST00000160542.9 ENSMUST00000162110.8 ENSMUST00000164777.8 |
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| CDS CCA 72 bp | CCCATGCTGGAGACACTAGCTGTACTAATTCAAACCTaGTTAGGAAGCTTTCTAAAAGTTCTGCGACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PMLETLAVLIQT*LGSFLKVLRQL Trigger: GAGCTGTCGCAGAACTTTTAGAAAGCTTCCTAACCAGGTTTGAATTAGTACAGCTAGTGTCTCCAGCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025872.13 ENSMUST00000161813.2 ENSMUST00000162110.8 |
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| CDS CCA 72 bp | CTTCTTCGAACAGTGCTCCAAATTATTTTCACCAAATaGGTTCCCACTGTCCACCACAAATGGAGGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLRTVLQIIFTK*VPTVHHKWRFP Trigger: AGGAAACCTCCATTTGTGGTGGACAGTGGGAACCCATTTGGTGAAAATAATTTGGAGCACTGTTCGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160542.9 |
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| CDS CAA 72 bp | AGCTTTCTAAAAGTTCTGCGACAGCTCCAGGATCTATaGCCTCTTCAAATACCTTTACAAATCTCATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFLKVLRQLQDL*PLQIPLQISCS Trigger: AGAGCATGAGATTTGTAAAGGTATTTGAAGAGGCAATAGATCCTGGAGCTGTCGCAGAACTTTTAGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162110.8 |
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