Pregenerated sensors for SPATA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034401Ensembl transcript IDs: ENSMUST00000038868.14, ENSMUST00000070513.13, ENSMUST00000084354.4, ENSMUST00000153746.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGGTCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTaGTCAGTAGCTCCAGTGGGTATGGCAGGCCTCTTCTCCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SGHFLLGVLQDLLPR*SVAPVGMAGLFSPS Trigger: TGAAGGGGAGAAGAGGCCTGCCATACCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR GCA 90 bp | ATAGCTCCAACTTCGCTGCTATTCAGGTATCATTCTGCTACACTCTaGCTCACAAATGCCTTCCTAGTTAGATTGGAAGTAAACCATATA | + |
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Preference number: 1 (lower is better) Translates to: IAPTSLLFRYHSATL*LTNAFLVRLEVNHI Trigger: TATATGGTTTACTTCCAATCTAACTAGGAAGGCATTTGTGAGGCAGAGTGTAGCAGAATGATACCTGAATAGCAGCGAAGTTGGAGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR TCA 90 bp | ATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTaGACATCTGTTTTAAAGAAAGGCGTACAAATACAGATCACATCA | + |
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Preference number: 1 (lower is better) Translates to: IYHLKKYAGFNSVTQ*TSVLKKGVQIQITS Trigger: TGATGTGATCTGTATTTGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CAA 90 bp | ATCAGGTCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTaGGTCAGTAGCTCCAGTGGGTATGGCAGGCCTCTTCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IRSFSSWCAPGPSPT*VSSSSGYGRPLLPF Trigger: GAAGGGGAGAAGAGGCCTGCCATACCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAATCAAACGCTTTCATTaGGAGGTTGACATGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKIKRFH*EVDMDA Trigger: AGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGAT...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR-3UTR CCA 90 bp | ACTACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGAGGTCATTTTCTTCTTaGTGTGCTCCAGGACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TTSPNFLSTFSNPSLCMRRSFSS*CAPGPS Trigger: AGAAGGTCCTGGAGCACACCAAGAAGAAAATGACCT...CCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACATCAAACGCTTTCATTaGGAGGTTGACATGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: ECICELYKESQFLGPKKYIKRFH*EVDMDA Trigger: AGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGAT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCATTCTGTAATAAAGGCTaGACTGTGATAATTTACCAC | + |
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Preference number: 2 (lower is better) Translates to: SRKNLFFSLSMVTGAHVAFCNKG*TVIIYH Trigger: GTGGTAAATTATCACAGTCCAGCCTTTATTACAGAA...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CAA 90 bp | TATCATTCTGCTACACTCTGCCTCACAAATGCCTTCCTAGTTAGATaGGAAGTAAACCATATATTTCTTCAGACACTTTCTAGAGACATG | + |
|
Preference number: 2 (lower is better) Translates to: YHSATLCLTNAFLVR*EVNHIFLQTLSRDM Trigger: CATGTCTCTAGAAAGTGTCTGAAGAAATATATGGTTTACTTCCAATCTAACTAGGAAGGCATTTGTGAGGCAGAGTGTAGCAGAATGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACCTTGAAGAAATATGCTaGGTTCAACTCTGTTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: ECICELYKESQFLGPKKYLEEIC*VQLCYS Trigger: TGAGTAACAGAGTTGAACCCAGCATATTTCTTCAAG...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAACCACTTGAAGAAATATaGTGGGTTCAACTCTGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LVSTCLLTQAASLFCLHQPLEEI*WVQLCY Trigger: GTAACAGAGTTGAACCCAGCATATTTCTTCAAGTGG...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CCA 72 bp | TTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTaGTCAGTAGCTCCAGTGGGTATGGCAGGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLLGVLQDLLPR*SVAPVGMAGLF Trigger: GAAGAGGCCTGCCATACCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCGCTGCTATTCAGGTATCATTCTGCTACACTCTGCCTCACAAATGCCTTCCCAGGTCATTTTCTTCTaGGTGTGCTCCAGGACCTTC | + |
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Preference number: 3 (lower is better) Translates to: LRCYSGIILLHSASQMPSQVIFF*VCSRTF Trigger: GAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTG...GGAAGGCATTTGTGAGGCAGAGTGTAGCAGAATGATACCTGAATAGCAGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR GCA 72 bp | ACTTCGCTGCTATTCAGGTATCATTCTGCTACACTCTaGCTCACAAATGCCTTCCTAGTTAGATTGGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: TSLLFRYHSATL*LTNAFLVRLEV Trigger: TACTTCCAATCTAACTAGGAAGGCATTTGTGAGGCAGAGTGTAGCAGAATGATACCTGAATAGCAGCGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| 3UTR-3UTR CAA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCAGTGATAATTTACCACTaGAAGAAATATGCTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SRKNLFFSLSMVTGAHVAVIIYH*KKYAGF Trigger: GAACCCAGCATATTTCTTCAAGTGGTAAATTATCAC...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR-3UTR CAA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTGTGGCAAGATAGCCTaGTCACAGATTGGAAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: ECICELYKESQFLGPKKYCGKIA*SQIGSC Trigger: ACAACTTCCAATCTGTGACAAGGCTATCTTGCCACA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR TCA 72 bp | AGGCGTACAAATACAGATCACATCAAACGCTTTCATTaGGAGGTTGACATGGACGCTTATACAGTTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRTNTDHIKRFH*EVDMDAYTVYG Trigger: ACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CCA 72 bp | CTGGACTGTGATAATTTACCACTTGAAGAAATATGCTaGGTTCAACTCTGTTACTCAGTGAACATCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDCDNLPLEEIC*VQLCYSVNICF Trigger: AAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR TCA 72 bp | TTGAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTaGACATCTGTTTTAAAGAAAGGCGTACAAATACAG | + |
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Preference number: 3 (lower is better) Translates to: LKKYAGFNSVTQ*TSVLKKGVQIQ Trigger: CTGTATTTGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CCA 72 bp | GACATTGGAAACAGCACATTCTTCTGTAATAAAGGCTaGACTGTGATAATTTACCACTTGAAGAAATATGCT | + |
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Preference number: 3 (lower is better) Translates to: DIGNSTFFCNKG*TVIIYHLKKYA Trigger: AGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCCTTTATTACAGAAGAATGTGCTGTTTCCAATGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CAA 72 bp | TTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTaGGTCAGTAGCTCCAGTGGGTATGGCAGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSSWCAPGPSPT*VSSSSGYGRPL Trigger: AAGAGGCCTGCCATACCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGTGGGTCCAGACATTTGGTTTaGACCCGGGAACATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: SSWCAPGPSPTLVSSSSGSRHLV*TREHEI Trigger: GATTTCATGTTCCCGGGTCCAAACCAAATGTCTGGA...CCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR TCA 90 bp | TCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCGGTAACCTGGCGGTTTaGATCATGGTGTCCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: SFSSWCAPGPSPTLVSSSGNLAV*IMVSRH Trigger: ATGTCTGGACACCATGATTCAAACCGCCAGGTTACC...GGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR GCA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACAAGCGCCAGGGCGCATTaGAGCGCCTTCACCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: CWVQLCYSVNICFKERRTSARAH*SAFTFG Trigger: GCCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCT...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR GCA 90 bp | TACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGACAGCGCCAGGGCGCATTaGAGCGCCTTCACCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: YQSKFLIHFLKPFPMYEDSARAH*SAFTFG Trigger: GCCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCT...GTCCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR CCA 90 bp | TCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGACCAGGGGAAAAGTaGCTGGGACACATTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFSSWCAPGPSPTLVSSSRPGEK*LGHIVS Trigger: AGACACAATGTGTCCCAGCCACTTTTCCCCTGGTCT...GGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGTGGGTGGCGGTTTGAATCATaGTGTCCAGACATTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SSWCAPGPSPTLVSSSSGWRFES*CPDIWF Trigger: AAACCAAATGTCTGGACACCATGATTCAAACCGCCA...CCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGGCTAGTACATCAGGTCATTTTCTTCTTGGTGTGCTCCAGGACCTTCACCACAAAGGTTCTTTaGGGCTTCCTGAGTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LYRLVHQVIFFLVCSRTFTTKVL*GFLSAA Trigger: TGCCGCACTCAGGAAGCCTCAAAGAACCTTTGTGGT...GAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTGATGTACTAGCCTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR GCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGAGCGCCAGGGCGCATTaGAGCGCCTTCACCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLSARAH*SAFTFG Trigger: GCCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCT...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR CCA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACAGGTCCCAGATTTAAATaGGCCAGCCGCCGCCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: CWVQLCYSVNICFKERRTGPRFK*ASRRRV Trigger: CACTCGGCGGCGGCTGGCCCATTTAAATCTGGGACC...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| 3UTR CAA 72 bp | GTTCTATACAGGCTAGTACATCAGGTCATTTTCTTCTaGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLYRLVHQVIFF*VCSRTFSHVGQ Trigger: CTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTGATGTACTAGCCTGTATAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGTGGGTGTGTCTTTTTGTATTaGCCAAACACACAGATACTA | + |
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Preference number: 4 (lower is better) Translates to: SSWCAPGPSPTLVSSSSGCVFLY*PNTQIL Trigger: TAGTATCTGTGTGTTTGGCCAATACAAAAAGACACA...CCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACGGTCCCAGATTTAAATaGGCCAGCCGCCGCCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYGPRFK*ASRRRV Trigger: CACTCGGCGGCGGCTGGCCCATTTAAATCTGGGACC...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR TCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTGATCGCTGTGCATCCTaGCCCATCCATCTCGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFDRCAS*PIHLVH Trigger: GTGAACGAGATGGATGGGTCAGGATGCACAGCGATC...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR GCA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCAGTGATCTTGATGTTCTaGATTGCAGTCTGCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRKNLFFSLSMVTGAHVAVILMF*IAVCRG Trigger: CCCACGGCAGACTGCAATGCAGAACATCAAGATCAC...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR CCA 90 bp | CTATACAGGCTAGTACATCAGGTCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTTTCAGCACCACTCCTaGACAAGTTACAGAGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: LYRLVHQVIFFLVCSRTFFQHHS*TSYRAD Trigger: ATCCGCTCTGTAACTTGTCCAGGAGTGGTGCTGAAA...GAAGGTCCTGGAGCACACCAAGAAGAAAATGACCTGATGTACTAGCCTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR TCA 90 bp | TCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCACATTCAGTGATCACTaGAGTTGTAGAAAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SFSSWCAPGPSPTLVSSSTFSDH*SCRKFQ Trigger: CTGGAATTTTCTACAACTTCAGTGATCACTGAATGT...GGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR TCA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCAAGTGCGGCACTTCCTTaGGCTTATCAGACATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SRKNLFFSLSMVTGAHVASAALP*AYQTFS Trigger: ACTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACT...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR TCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACGATCGCTGTGCATCCTaGCCCATCCATCTCGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYDRCAS*PIHLVH Trigger: GTGAACGAGATGGATGGGTCAGGATGCACAGCGATC...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR GCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTCAGAATGCTGGGGCTTaGTACATGTCCTTGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFQNAGA*YMSLGS Trigger: TGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTG...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR TCA 90 bp | TACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGACACACCATTCTGGCATTaGAGACCAGGGGAAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: YQSKFLIHFLKPFPMYEDTPFWH*RPGEKW Trigger: CCACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGT...GTCCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
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| CDS-3UTR TCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTGGTAACCTGGCGGTTTaGATCATGGTGTCCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFGNLAV*IMVSRH Trigger: ATGTCTGGACACCATGATTCAAACCGCCAGGTTACC...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR GCA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACAATCTCCAGGGTCTACTaGTTCCGGGAACACCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: CWVQLCYSVNICFKERRTISRVY*FREHLF Trigger: GAAAAGGTGTTCCCGGAAGCAGTAGACCCTGGAGAT...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR GCA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTAAGGTCCTTGCAGAATaGTGGGGCTTGCTACATGTC | + |
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Preference number: 4 (lower is better) Translates to: NAFIERLTWTLIQFMVDGKVLAE*WGLLHV Trigger: GACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTT...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR CCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTAGACCAGGGGAAAAGTaGCTGGGACACATTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFRPGEK*LGHIVS Trigger: AGACACAATGTGTCCCAGCCACTTTTCCCCTGGTCT...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS-3UTR CCA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCATCCAGACATTTGGTTTaGACCCGGGAACATGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRKNLFFSLSMVTGAHVASRHLV*TREHEI Trigger: GATTTCATGTTCCCGGGTCCAAACCAAATGTCTGGA...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTTGGTGTCCAGACATTTaGTTTGGACCCGGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: NAFIERLTWTLIQFMVDGWCPDI*FGPGNM Trigger: CATGTTCCCGGGTCCAAACCAAATGTCTGGACACCA...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGACTGGTGTCCAGACATTTaGTTTGGACCCGGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: YQSKFLIHFLKPFPMYEDWCPDI*FGPGNM Trigger: CATGTTCCCGGGTCCAAACCAAATGTCTGGACACCA...GTCCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACAGTCCTTGCAGAATGCTaGGGCTTGCTACATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWVQLCYSVNICFKERRTVLAEC*GLLHVL Trigger: AAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGAC...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTAAGAGGCTGCTCTGTTaGACCAGCATTCGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVKRLLC*TSIRHH Trigger: ATGATGGCGAATGCTGGTCCAACAGAGCAGCCTCTT...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| 3UTR CAA 72 bp | GTCGATGGTGACAGGAGCACATGTGGCAAGATAGCCTaGTCACAGATTGGAAGTTGTGACAATATTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDGDRSTCGKIA*SQIGSCDNIIE Trigger: CTCTATAATATTGTCACAACTTCCAATCTGTGACAAGGCTATCTTGCCACATGTGCTCCTGTCACCATCGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAAGTGCGGCACTTCCTTaGGCTTATCAGACATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKSAALP*AYQTFS Trigger: ACTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACT...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACATCTCCAGGGTCTACTaGTTCCGGGAACACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYISRVY*FREHLF Trigger: GAAAAGGTGTTCCCGGAAGCAGTAGACCCTGGAGAT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACAGACCAGGGGAAAAGTaGCTGGGACACATTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYRPGEK*LGHIVS Trigger: AGACACAATGTGTCCCAGCCACTTTTCCCCTGGTCT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCTGCCTCACAAATGCCTTCCTAGTTAGATTGGAAGTAAACCATATACTCCTCATGGTAACCTaGCGGTTTGAATCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATLCLTNAFLVRLEVNHILLMVT*RFESWC Trigger: ACACCATGATTCAAACCGCCAGGTTACCATGAGGAG...TATATGGTTTACTTCCAATCTAACTAGGAAGGCATTTGTGAGGCAGAGTGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAACATTGCAGTCTGCCGTaGGATTTTTCAACTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKHCSLP*DFSTGA Trigger: AGCTCCAGTTGAAAAATCCCACGGCAGACTGCAATG...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACAAGAGGCTGCTCTGTTaGACCAGCATTCGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYKRLLC*TSIRHH Trigger: ATGATGGCGAATGCTGGTCCAACAGAGCAGCCTCTT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGACACCATTCTGGCATTaGAGACCAGGGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLTPFWH*RPGEKW Trigger: CCACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGT...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGGTCTCTCCCATGTGGTaGCCTGATAACCTTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLVSPMW*PDNLVV Trigger: GACTACAAGGTTATCAGGTCACCACATGGGAGAGAC...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTTTCTGCATTGCAGTCTaGCGTGGGATTTTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVFCIAV*RGIFQL Trigger: CAGTTGAAAAATCCCACGGCAGACTGCAATGCAGAA...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTCTTGATGTTCTGCATTaGAGTCTGCCGTGGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAFIERLTWTLIQFMVDGLDVLH*SLPWDF Trigger: AAAATCCCACGGCAGACTGCAATGCAGAACATCAAG...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGGTGATCTTGATGTTCTaGATTGCAGTCTGCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLVILMF*IAVCRG Trigger: CCCACGGCAGACTGCAATGCAGAACATCAAGATCAC...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAACAGAATGCTGGGGCTTaGTACATGTCCTTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEQNAGA*YMSLGS Trigger: TGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTG...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTTTCAGCACCACTCCTaGACAAGTTACAGAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYFQHHS*TSYRAD Trigger: ATCCGCTCTGTAACTTGTCCAGGAGTGGTGCTGAAA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTCAGGGGAAAAGTGGCTaGGACACATTGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAFIERLTWTLIQFMVDGQGKSG*DTLCLF Trigger: AAAAAGACACAATGTGTCCCAGCCACTTTTCCCCTG...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAACAGGGGAAAAGTGGCTaGGACACATTGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKQGKSG*DTLCLF Trigger: AAAAAGACACAATGTGTCCCAGCCACTTTTCCCCTG...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCTGCCTCACAAATGCCTTCCTAGTTAGATTGGAAGTAAACCATATACAGGGGAAAAGTGGCTaGGACACATTGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATLCLTNAFLVRLEVNHIQGKSG*DTLCLF Trigger: AAAAAGACACAATGTGTCCCAGCCACTTTTCCCCTG...TATATGGTTTACTTCCAATCTAACTAGGAAGGCATTTGTGAGGCAGAGTGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTTCCTCTCGGGTGACTTaGACTTTTTCTTCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFSSRVT*TFSSVI Trigger: GATCACAGAAGAAAAAGTCCAAGTCACCCGAGAGGA...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTGTTGAAGGTGCTGAATaGACTAGTAAGGTCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVVEGAE*TSKVLA Trigger: TGCAAGGACCTTACTAGTCCATTCAGCACCTTCAAC...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTGTTGAAGGTGCTGAATaGACTAGTAAGGTCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFVEGAE*TSKVLA Trigger: TGCAAGGACCTTACTAGTCCATTCAGCACCTTCAAC...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAGAACACCAATCAGAGTaGAATCTTTCCCTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKEHQSE*NLSLRE Trigger: CTCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTC...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTTCTTTTACCCGGTCATaGATCTCATCACAGTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NAFIERLTWTLIQFMVDGSFTRS*ISSQFG Trigger: TCCGAACTGTGATGAGATCCATGACCGGGTAAAAGA...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
||
| CDS-3UTR TCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAACACCATTCTGGCATTaGAGACCAGGGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKETPFWH*RPGEKW Trigger: CCACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGT...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTTTGGACCCGGGAACATaGAATCTCGTGTATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVLDPGT*NLVYFH Trigger: ATGAAAATACACGAGATTTCATGTTCCCGGGTCCAA...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAGGTAACCTGGCGGTTTaGATCATGGTGTCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEGNLAV*IMVSRH Trigger: ATGTCTGGACACCATGATTCAAACCGCCAGGTTACC...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAAACTACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATAGTGCGGCACTTCCTTaGGCTTATCAGACATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRKLPVQISYPLSQTLPYSAALP*AYQTFS Trigger: ACTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACT...ATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTAGTTTTCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAGTCTCTCCCATGTGGTaGCCTGATAACCTTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQVSPMW*PDNLVV Trigger: GACTACAAGGTTATCAGGTCACCACATGGGAGAGAC...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTGTAGTCCTTGGATCTaGAGCAGCCAATATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYCSPWI*SSQYED Trigger: ATCCTCATATTGGCTGCTGCAGATCCAAGGACTACA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAAAGGTCCTTGCAGAATaGTGGGGCTTGCTACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQKVLAE*WGLLHV Trigger: GACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTT...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAATGGTGTCCAGACATTTaGTTTGGACCCGGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEWCPDI*FGPGNM Trigger: CATGTTCCCGGGTCCAAACCAAATGTCTGGACACCA...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTTGGCGGTTTGAATCATaGTGTCCAGACATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QITSNAFIERLTWTLIQFWRFES*CPDIWF Trigger: AAACCAAATGTCTGGACACCATGATTCAAACCGCCA...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAGTCCTTGCAGAATGCTaGGGCTTGCTACATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEVLAEC*GLLHVL Trigger: AAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGAC...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACGAACACCAATCAGAGTaGAATCTTTCCCTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYEHQSE*NLSLRE Trigger: CTCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTC...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAACTCTCATCCCGGTCATaGATCTCATCACAGTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQLSSRS*ISSQFG Trigger: TCCGAACTGTGATGAGATCCATGACCGGGATGAGAG...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTTGGACCCGGGAACATaGAATCTCGTGTATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYLDPGT*NLVYFH Trigger: ATGAAAATACACGAGATTTCATGTTCCCGGGTCCAA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGTGTACATCTTGTCCATaGTGTTCTCAAAGACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLCTSCP*CSQRRV Trigger: GACCCGTCTTTGAGAACAGCATGGACAAGATGTACA...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCATGTGTCTTTTTGTATTaGCCAAACACACAGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: SRKNLFFSLSMVTGAHVACVFLY*PNTQIL Trigger: TAGTATCTGTGTGTTTGGCCAATACAAAAAGACACA...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGTCCAGACATTTGGTTTaGACCCGGGAACATGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLSRHLV*TREHEI Trigger: GATTTCATGTTCCCGGGTCCAAACCAAATGTCTGGA...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAACTCCTCATGGTAACCTaGCGGTTTGAATCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQLLMVT*RFESWC Trigger: ACACCATGATTCAAACCGCCAGGTTACCATGAGGAG...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAACATTCAGTGATCACTaGAGTTGTAGAAAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKTFSDH*SCRKFQ Trigger: CTGGAATTTTCTACAACTTCAGTGATCACTGAATGT...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGAAGCTTTCCTGTGTATaGGAAACAGAACTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLKLSCV*ETELQA Trigger: AGCCTGTAGTTCTGTTTCTCATACACAGGAAAGCTT...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTTATCAACTCAAACACTaGTGTATCATACTCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVYQLKH*CIILKL Trigger: CAGCTTGAGTATGATACAGCAGTGTTTGAGTTGATA...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | ACTACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGTATCAACTCAAACACTaGTGTATCATACTCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTSPNFLSTFSNPSLCMRYQLKH*CIILKL Trigger: CAGCTTGAGTATGATACAGCAGTGTTTGAGTTGATA...CCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATTCTGCATTGCAGTCTaGCGTGGGATTTTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQFCIAV*RGIFQL Trigger: CAGTTGAAAAATCCCACGGCAGACTGCAATGCAGAA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAACTTGATGTTCTGCATTaGAGTCTGCCGTGGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKELDVLH*SLPWDF Trigger: AAAATCCCACGGCAGACTGCAATGCAGAACATCAAG...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATGTAGTCCTTGGATCTaGAGCAGCCAATATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQCSPWI*SSQYED Trigger: ATCCTCATATTGGCTGCTGCAGATCCAAGGACTACA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATGTACATCTTGTCCATaGTGTTCTCAAAGACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQCTSCP*CSQRRV Trigger: GACCCGTCTTTGAGAACAGCATGGACAAGATGTACA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATCCTCTCGGGTGACTTaGACTTTTTCTTCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQSSRVT*TFSSVI Trigger: GATCACAGAAGAAAAAGTCCAAGTCACCCGAGAGGA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| 3UTR CAA 72 bp | CAAATACAGATCACATCAAACGCTTTCATTGAGAGGTaGACATGGACGCTTATACAGTTTATGGTAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QIQITSNAFIER*TWTLIQFMVDG Trigger: ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACACATTCAGTGATCACTaGAGTTGTAGAAAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYTFSDH*SCRKFQ Trigger: CTGGAATTTTCTACAACTTCAGTGATCACTGAATGT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR TCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTGCATGAGCTTGATGTaGTTTCAAGACATCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYCMSLM*FQDIFY Trigger: GTAAAAGATGTCTTGAAATCACATCAAGCTCATGCA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
||
| CDS-3UTR TCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAAGCTTTCCTGTGTATaGGAAACAGAACTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEKLSCV*ETELQA Trigger: AGCCTGTAGTTCTGTTTCTCATACACAGGAAAGCTT...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACTATCAACTCAAACACTaGTGTATCATACTCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECICELYKESQFLGPKKYYQLKH*CIILKL Trigger: CAGCTTGAGTATGATACAGCAGTGTTTGAGTTGATA...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATGGCGGTTTGAATCATaGTGTCCAGACATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQWRFES*CPDIWF Trigger: AAACCAAATGTCTGGACACCATGATTCAAACCGCCA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAGCTGTTCGTAGTTCTTaGTGTTTATGCAATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKAVRSS*CLCNIY Trigger: GTAAATATTGCATAAACACCAAGAACTACGAACAGC...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTGCTGTTCGTAGTTCTTaGTGTTTATGCAATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVAVRSS*CLCNIY Trigger: GTAAATATTGCATAAACACCAAGAACTACGAACAGC...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGATGTCTAATCACAAATaGAGGCTTATCTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKKGVQIQITSNAFIERLMSNHK*RLICFL Trigger: AAGGAAACAGATAAGCCTCCATTTGTGATTAGACAT...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATGTGTCTTTTTGTATTaGCCAAACACACAGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: LVSTCLLTQAASLFCLHQCVFLY*PNTQIL Trigger: TAGTATCTGTGTGTTTGGCCAATACAAAAAGACACA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAATGTCTAATCACAAATaGAGGCTTATCTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEICWVQLCYSVNICFKEMSNHK*RLICFL Trigger: AAGGAAACAGATAAGCCTCCATTTGTGATTAGACAT...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGTGGGAACCACAAAGGTTCTTaGAGGCTTCCTGAGTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSWCAPGPSPTLVSSSSGNHKGS*RLPECG Trigger: GCCGCACTCAGGAAGCCTCAAAGAACCTTTGTGGTT...CCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS GCA 90 bp | GCTGTTCTCAAAGACGGGTCGGTGGGATTTCCCTTTACAAGAGGCTaGTCTGTTGGACCAGCATTCGCCATCATCCAAATGGAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVLKDGSVGFPFTRG*SVGPAFAIIQMERA Trigger: GGCTCTTTCCATTTGGATGATGGCGAATGCTGGTCCAACAGAGCAGCCTCTTGTAAAGGGAAATCCCACCGACCCGTCTTTGAGAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTCAGCGCCAGGGCGCATaGCAGCGCCTTCACCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NAFIERLTWTLIQFMVDGQRQGA*QRLHLR Trigger: CCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCTG...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATGTATGAGGACCAGCGCCAGGGCGCATaGCAGCGCCTTCACCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YQSKFLIHFLKPFPMYEDQRQGA*QRLHLR Trigger: CCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCTG...GTCCTCATACATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCGAGTGCGGCACTTCCTaGAGCTTATCAGACATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFSSWCAPGPSPTLVSSSECGTS*SLSDIQ Trigger: CTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACTC...GGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGAAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS TCA 90 bp | TGGGTCTCTCTCATCCCGGTCATGGATCTCATCACAGTTCGGAGGTaGACACCAATCAGAGTGGAATCTTTCCCTGAGAGAGGCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: WVSLIPVMDLITVRR*TPIRVESFPERGSI Trigger: AATAGAGCCTCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTCACCTCCGAACTGTGATGAGATCCATGACCGGGATGAGAGAGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084354.4 |
||
| CDS CCA 90 bp | AGCACAGGGCTTGCACAATGCTTTGGTGTTGTTGAAGGTGCTGAATaGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTTGCTACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: STGLAQCFGVVEGAE*TSKVLAECWGLLHV Trigger: GACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATTGTGCAAGCCCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CCA 90 bp | AAGTTCCTGTACATCTTGTCCATGCTGTTCTCAAAGACGGGTCGGTaGGATTTCCCTTTACAAGAGGCTGCTCTGTTGGACCAGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: KFLYILSMLFSKTGR*DFPLQEAALLDQHS Trigger: CGAATGCTGGTCCAACAGAGCAGCCTCTTGTAAAGGGAAATCCCACCGACCCGTCTTTGAGAACAGCATGGACAAGATGTACAGGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGCAGCGCCAGGGCGCATaGCAGCGCCTTCACCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKKGVQIQITSNAFIERLQRQGA*QRLHLR Trigger: CCGAAGGTGAAGGCGCTGCAATGCGCCCTGGCGCTG...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTGGTGTGCTCCAGGACCTTCTCCCACGTTGGTCAGTAGCTCCAGTGGGACACATTGTGTCTTTTaGTATTGGCCAAACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSWCAPGPSPTLVSSSSGTHCVF*YWPNTQ Trigger: CTGTGTGTTTGGCCAATACAAAAAGACACAATGTGT...CCCACTGGAGCTACTGACCAACGTGGGAGAAGGTCCTGGAGCACACCAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS GCA 90 bp | GGTGTTGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTTGCAGAATaGTGGGGCTTGCTACATGTCCTTGGGCTCAAATATTCCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GVVEGAEWTSKVLAE*WGLLHVLGLKYSSH Trigger: GTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CCA 90 bp | CTTAGGCCAGAAATCCTCCTCATGGTAACCTGGCGGTTTGAATCATaGTGTCCAGACATTTGGTTTGGACCCGGGAACATGAAATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LRPEILLMVTWRFES*CPDIWFGPGNMKSR Trigger: ACGAGATTTCATGTTCCCGGGTCCAAACCAAATGTCTGGACACCATGATTCAAACCGCCAGGTTACCATGAGGAGGATTTCTGGCCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 ENSMUST00000153746.8 |
||
| CDS-3UTR CAA 90 bp | CTTCGCTGCTATTCAGGTATCATTCTGCTACACTCTGCCTCACAAATGCCTTCCATGGTGTCCAGACATTaGGTTTGGACCCGGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LRCYSGIILLHSASQMPSMVSRH*VWTREH Trigger: ATGTTCCCGGGTCCAAACCAAATGTCTGGACACCAT...GGAAGGCATTTGTGAGGCAGAGTGTAGCAGAATGATACCTGAATAGCAGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS GCA 90 bp | AAGGTGCTGAATGGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTTaGTACATGTCCTTGGGCTCAAATATTCCTCACACCTTTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLNGLVRSLQNAGA*YMSLGSNIPHTFQR Trigger: CCTTTGAAAGGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CCA 90 bp | GTTGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTTGCAGAATGCTaGGGCTTGCTACATGTCCTTGGGCTCAAATATTCCTCACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVEGAEWTSKVLAEC*GLLHVLGLKYSSHL Trigger: AAGGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS TCA 90 bp | CAAGACATCTTTTACCCGGTCATGGATCTCATCACAGTTCGGAGGTaGACACCAATCAGAGTGGAATCTTTCCCTGAGAGAGGCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QDIFYPVMDLITVRR*TPIRVESFPERGSI Trigger: AATAGAGCCTCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTCACCTCCGAACTGTGATGAGATCCATGACCGGGTAAAAGATGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
||
| CDS-3UTR CAA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCAATGGTGTCCAGACATTaGGTTTGGACCCGGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SRKNLFFSLSMVTGAHVAMVSRH*VWTREH Trigger: ATGTTCCCGGGTCCAAACCAAATGTCTGGACACCAT...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACACAAGAGGCTGCTCTGTaGGACCAGCATTCGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CWVQLCYSVNICFKERRTQEAAL*DQHSPS Trigger: TGATGGCGAATGCTGGTCCAACAGAGCAGCCTCTTG...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTCAAGAGGCTGCTCTGTaGGACCAGCATTCGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QITSNAFIERLTWTLIQFQEAAL*DQHSPS Trigger: TGATGGCGAATGCTGGTCCAACAGAGCAGCCTCTTG...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS GCA 90 bp | AATCTTTCCCTGAGAGAGGCTCTATTTAGCACAGGGCTTGCACAATaGTTTGGTGTTGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLSLREALFSTGLAQ*FGVVEGAEWTSKVL Trigger: AAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATTGTGCAAGCCCTGTGCTAAATAGAGCCTCTCTCAGGGAAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGTTCTATACAGGCTAGTACATCAGGTCATTTTCTTCTTGGTGTGCTCCAGAACACCATTCTGGCATaGAAGACCAGGGGAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSIQASTSGHFLLGVLQNTILA*KTRGKV Trigger: CACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGTT...CTGGAGCACACCAAGAAGAAAATGACCTGATGTACTAGCCTGTATAGAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAGAGTGCGGCACTTCCTaGAGCTTATCAGACATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKECGTS*SLSDIQ Trigger: CTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACTC...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTAGTGGCTGGGACACATaGTGTCTTTTTGTATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QITSNAFIERLTWTLIQFSGWDT*CLFVLA Trigger: GGCCAATACAAAAAGACACAATGTGTCCCAGCCACT...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAAACACCATTCTGGCATaGAAGACCAGGGGAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKNTILA*KTRGKV Trigger: CACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGTT...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTAACACCATTCTGGCATaGAAGACCAGGGGAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QITSNAFIERLTWTLIQFNTILA*KTRGKV Trigger: CACTTTTCCCCTGGTCTTCAATGCCAGAATGGTGTT...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTCTCCTCTCGGGTGACTaGGACTTTTTCTTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVLLSGD*DFFFCD Trigger: ATCACAGAAGAAAAAGTCCAAGTCACCCGAGAGGAG...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTCTCCTCTCGGGTGACTaGGACTTTTTCTTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NAFIERLTWTLIQFMVDGLLSGD*DFFFCD Trigger: ATCACAGAAGAAAAAGTCCAAGTCACCCGAGAGGAG...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTCACACATCCGTCTTTTaGTGTAGGGAGATGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVHTSVF*CREMES Trigger: ACTCTCCATCTCCCTACACAAAAAGACGGATGTGTG...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACAGCTTGCTACATGTCCTaGGGCTCAAATATTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CWVQLCYSVNICFKERRTACYMS*GSNIPH Trigger: GTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGC...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TCTAGAAAGAACCTATTCTTCAGTTTGTCGATGGTGACAGGAGCACATGTGGCAAATGCTTTGGTGTTGTaGAAGGTGCTGAATGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SRKNLFFSLSMVTGAHVANALVL*KVLNGL Trigger: TAGTCCATTCAGCACCTTCAACAACACCAAAGCATT...TGCCACATGTGCTCCTGTCACCATCGACAAACTGAAGAATAGGTTCTTTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGATGGTGTCCAGACATTaGGTTTGGACCCGGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LKKGVQIQITSNAFIERLMVSRH*VWTREH Trigger: ATGTTCCCGGGTCCAAACCAAATGTCTGGACACCAT...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTTATTTAGCACAGGGCTaGCACAATGCTTTGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NAFIERLTWTLIQFMVDGYLAQG*HNALVL Trigger: CAACACCAAAGCATTGTGCAAGCCCTGTGCTAAATA...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAAACTACCAGTCCAAATTTCTTATCCACTTTCTCAAACCCTTCCCTATAGTGGCTGGGACACATaGTGTCTTTTTGTATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRKLPVQISYPLSQTLPYSGWDT*CLFVLA Trigger: GGCCAATACAAAAAGACACAATGTGTCCCAGCCACT...ATAGGGAAGGGTTTGAGAAAGTGGATAAGAAATTTGGACTGGTAGTTTTCTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAGAGTGCGGCACTTCCTaGAGCTTATCAGACATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQECGTS*SLSDIQ Trigger: CTGAATGTCTGATAAGCTCAAGGAAGTGCCGCACTC...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACCACAATGCTTTGGTGTaGTTGAAGGTGCTGAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ECICELYKESQFLGPKKYHNALV*LKVLNG Trigger: TCCATTCAGCACCTTCAACAACACCAAAGCATTGTG...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGGTCTTCTAAAGAAGGAGTGAGTGCATATGTGAGCTTTACAAAGAAAACACATTGTGTCTTTTaGTATTGGCCAAACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSWSSKEGVSAYVSFTKKTHCVF*YWPNTQ Trigger: CTGTGTGTTTGGCCAATACAAAAAGACACAATGTGT...TTTCTTTGTAAAGCTCACATATGCACTCACTCCTTCTTTAGAAGACCAGCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GAAGAAATATGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGTGGCTGGGACACATaGTGTCTTTTTGTATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEICWVQLCYSVNICFKESGWDT*CLFVLA Trigger: GGCCAATACAAAAAGACACAATGTGTCCCAGCCACT...TTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCATATTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAACACACATCCGTCTTTTaGTGTAGGGAGATGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQHTSVF*CREMES Trigger: ACTCTCCATCTCCCTACACAAAAAGACGGATGTGTG...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAGCTTGCTACATGTCCTaGGGCTCAAATATTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQACYMS*GSNIPH Trigger: GTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGC...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GAGTGCATATGTGAGCTTTACAAAGAAAGCCAGTTTTTAGGACCCAAGAAATACAATGCTTTGGTGTTGTaGAAGGTGCTGAATGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: ECICELYKESQFLGPKKYNALVL*KVLNGL Trigger: TAGTCCATTCAGCACCTTCAACAACACCAAAGCATT...GTATTTCTTGGGTCCTAAAAACTGGCTTTCTTTGTAAAGCTCACATATGCACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGTTCAACTCTGTTACTCAGTGAACATCTGTTTTAAAGAAAGGCGTACATTGTGTCTTTTTGTATaGGCCAAACACACAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: CWVQLCYSVNICFKERRTLCLFV*AKHTDT Trigger: AGTATCTGTGTGTTTGGCCAATACAAAAAGACACAA...TGTACGCCTTTCTTTAAAACAGATGTTCACTGAGTAACAGAGTTGAACCCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTTTGTGTCTTTTTGTATaGGCCAAACACACAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: QITSNAFIERLTWTLIQFLCLFV*AKHTDT Trigger: AGTATCTGTGTGTTTGGCCAATACAAAAAGACACAA...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATATTTAGCACAGGGCTaGCACAATGCTTTGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQYLAQG*HNALVL Trigger: CAACACCAAAGCATTGTGCAAGCCCTGTGCTAAATA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGACTGTGATAATTTACCACTTGAAGAAATATGCTGGGTTCAACTCTGTTCATCACATAAATGTCTaGCATGAGCTTGATGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GWTVIIYHLKKYAGFNSVHHINV*HELDVI Trigger: AATCACATCAAGCTCATGCAAGACATTTATGTGATG...AACAGAGTTGAACCCAGCATATTTCTTCAAGTGGTAAATTATCACAGTCCAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
||
| CDS-3UTR CAA 90 bp | AACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTATGGTAGATGGTGAACTACAGGCTTTTTaGTATAAGTTCCTGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: NAFIERLTWTLIQFMVDGELQAF*YKFLYI Trigger: GATGTACAGGAACTTATACAAAAAAGCCTGTAGTTC...ACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | CAGATCACATCAAACGCTTTCATTGAGAGGTTGACATGGACGCTTATACAGTTTGAACTACAGGCTTTTTaGTATAAGTTCCTGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QITSNAFIERLTWTLIQFELQAF*YKFLYI Trigger: GATGTACAGGAACTTATACAAAAAAGCCTGTAGTTC...AAACTGTATAAGCGTCCATGTCAACCTCTCAATGAAAGCGTTTGATGTGATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAAAGGCGTACAAATACAGATCACATCAAACGCTTTCATTGAGAGGTTGTTTTCTTCTGTGATCTaGATGTTCTGCATTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKKGVQIQITSNAFIERLFSSVI*MFCIAV Trigger: GACTGCAATGCAGAACATCAAGATCACAGAAGAAAA...CAACCTCTCAATGAAAGCGTTTGATGTGATCTGTATTTGTACGCCTTTCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAAAGTTCCTGTACATCTaGTCCATGCTGTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQKFLYI*SMLFSK Trigger: CTTTGAGAACAGCATGGACAAGATGTACAGGAACTT...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAAACACATTGTGTCTTTTaGTATTGGCCAAACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQTHCVF*YWPNTQ Trigger: CTGTGTGTTTGGCCAATACAAAAAGACACAATGTGT...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTACATGCTTACTAACACAGGCTGCTTCATTATTCTGTTTGCATCAATTTTCTTCTGTGATCTaGATGTTCTGCATTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSTCLLTQAASLFCLHQFSSVI*MFCIAV Trigger: GACTGCAATGCAGAACATCAAGATCACAGAAGAAAA...TTGATGCAAACAGAATAATGAAGCAGCCTGTGTTAGTAAGCATGTAGAAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS GCA 72 bp | CAACTCAAGCTGTGCGACCACATCTCCAGGGTCTACTaGTTCCGGGAACACCTTTTCAAACACCATTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLKLCDHISRVY*FREHLFKHHSG Trigger: GCCAGAATGGTGTTTGAAAAGGTGTTCCCGGAAGCAGTAGACCCTGGAGATGTGGTCGCACAGCTTGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070513.13 |
||
| CDS GCA 72 bp | ATACTCAAGCTGTGCGACCACATCTCCAGGGTCTACTaGTTCCGGGAACACCTTTTCAAACACCATTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILKLCDHISRVY*FREHLFKHHSG Trigger: GCCAGAATGGTGTTTGAAAAGGTGTTCCCGGAAGCAGTAGACCCTGGAGATGTGGTCGCACAGCTTGAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 ENSMUST00000153746.8 |
||
| CDS CCA 72 bp | TCGTCTTCTCTCTCTGGGTCTCTCTCATCCCGGTCATaGATCTCATCACAGTTCGGAGGTGAACACCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSGSLSSRS*ISSQFGGEHQS Trigger: TGATTGGTGTTCACCTCCGAACTGTGATGAGATCCATGACCGGGATGAGAGAGACCCAGAGAGAGAAGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084354.4 |
||
| CDS CAA 72 bp | GTGTTGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTaGCAGAATGCTGGGGCTTGCTACATGTCCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLKVLNGLVRS*QNAGACYMSLG Trigger: GCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS TCA 72 bp | CTCATCCCGGTCATGGATCTCATCACAGTTCGGAGGTaGACACCAATCAGAGTGGAATCTTTCCCTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIPVMDLITVRR*TPIRVESFPER Trigger: TCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTCACCTCCGAACTGTGATGAGATCCATGACCGGGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084354.4 |
||
| CDS CCA 72 bp | GGTCCTTGCAGAATGCTGGGGCTTGCTACATGTCCTTaGGCTCAAATATTCCTCACACCTTTCAAAGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GPCRMLGLATCP*AQIFLTPFKGI Trigger: GATCCCTTTGAAAGGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS GCA 72 bp | AATGGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTTaGTACATGTCCTTGGGCTCAAATATTCCTCACACC | + |
|
Preference number: 6 (lower is better) Translates to: NGLVRSLQNAGA*YMSLGSNIPHT Trigger: GGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS GCA 72 bp | GAAGGTGCTGAATGGACTAGTAAGGTCCTTGCAGAATaGTGGGGCTTGCTACATGTCCTTGGGCTCAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: EGAEWTSKVLAE*WGLLHVLGLKY Trigger: ATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CCA 72 bp | CTTGCACAATGCTTTGGTGTTGTTGAAGGTGCTGAATaGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAQCFGVVEGAE*TSKVLAECWGL Trigger: CAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATTGTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CAA 72 bp | GCCGAGTGTCTTCGGAAAGCTCACACATCCGTCTTTTaGTGTAGGGAGATGGAGAGTGTGACTTTGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AECLRKAHTSVF*CREMESVTLRK Trigger: TTTCCTCAAAGTCACACTCTCCATCTCCCTACACAAAAAGACGGATGTGTGAGCTTTCCGAAGACACTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CAA 72 bp | GAATGGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTaGCTACATGTCCTTGGGCTCAAATATTCCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: EWTSKVLAECWG*LHVLGLKYSSH Trigger: GTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CAA 90 bp | GGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTTGCTACATGTCCTaGGGCTCAAATATTCCTCACACCTTTCAAAGGGATCCTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLVRSLQNAGACYMS*GSNIPHTFQRDPQS Trigger: ACTTTGAGGATCCCTTTGAAAGGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CAA 90 bp | GAAGGTGCTGAATGGACTAGTAAGGTCCTTGCAGAATGCTGGGGCTaGCTACATGTCCTTGGGCTCAAATATTCCTCACACCTTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGAEWTSKVLAECWG*LHVLGLKYSSHLSK Trigger: CTTTGAAAGGTGTGAGGAATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS TCA 72 bp | TTTTACCCGGTCATGGATCTCATCACAGTTCGGAGGTaGACACCAATCAGAGTGGAATCTTTCCCTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FYPVMDLITVRR*TPIRVESFPER Trigger: TCTCTCAGGGAAAGATTCCACTCTGATTGGTGTTCACCTCCGAACTGTGATGAGATCCATGACCGGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
||
| CDS CAA 72 bp | GAGAGGCTCTATTTAGCACAGGGCTTGCACAATGCTTaGGTGTTGTTGAAGGTGCTGAATGGACTAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERLYLAQGLHNA*VLLKVLNGLVR Trigger: CCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATTGTGCAAGCCCTGTGCTAAATAGAGCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS CAA 90 bp | AATGCTTTGGTGTTGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTaGCAGAATGCTGGGGCTTGCTACATGTCCTTGGGCTCAAATATT | + |
|
Preference number: 6 (lower is better) Translates to: NALVLLKVLNGLVRS*QNAGACYMSLGSNI Trigger: AATATTTGAGCCCAAGGACATGTAGCAAGCCCCAGCATTCTGCAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
||
| CDS TCA 72 bp | GTCATTCTAGAACCACAAAGGTTCTTTGAGGCTTCCTaGGTGCGGCACTTCCTTGAGCTTATCAGACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: VILEPQRFFEAS*VRHFLELIRHS Trigger: TGAATGTCTGATAAGCTCAAGGAAGTGCCGCACTCAGGAAGCCTCAAAGAACCTTTGTGGTTCTAGAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153746.8 |
||
| CDS CCA 72 bp | GTAACCTGGCGGTTTGAATCATGGTGTCCAGACATTTaGTTTGGACCCGGGAACATGAAATCTCGTGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: VTWRFESWCPDI*FGPGNMKSRVF Trigger: AAATACACGAGATTTCATGTTCCCGGGTCCAAACCAAATGTCTGGACACCATGATTCAAACCGCCAGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 ENSMUST00000153746.8 |
||
| CDS CCA 72 bp | ATTCCTCTTAGGCCAGAAATCCTCCTCATGGTAACCTaGCGGTTTGAATCATGGTGTCCAGACATTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: IPLRPEILLMVT*RFESWCPDIWF Trigger: AAACCAAATGTCTGGACACCATGATTCAAACCGCCAGGTTACCATGAGGAGGATTTCTGGCCTAAGAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 ENSMUST00000153746.8 |
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| CDS CAA 72 bp | CTCTATTTAGCACAGGGCTTGCACAATGCTTTGGTGTaGTTGAAGGTGCTGAATGGACTAGTAAGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LYLAQGLHNALV*LKVLNGLVRSL Trigger: CAAGGACCTTACTAGTCCATTCAGCACCTTCAACAACACCAAAGCATTGTGCAAGCCCTGTGCTAAATAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS CAA 90 bp | AATATTTACTCCTCTCGGGTGACTTGGACTTTTTCTTCTGTGATCTaGATGTTCTGCATTGCAGTCTGCCGTGGGATTTTTCAACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NIYSSRVTWTFSSVI*MFCIAVCRGIFQLE Trigger: CTCCAGTTGAAAAATCCCACGGCAGACTGCAATGCAGAACATCAAGATCACAGAAGAAAAAGTCCAAGTCACCCGAGAGGAGTAAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS CAA 90 bp | CCAGTTCGTCTTCTCTCTCTGGGTCTCTCTCATCACATAAATGTCTaGCATGAGCTTGATGTGATTTCAAGACATCTTTTACCCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PVRLLSLGLSHHINV*HELDVISRHLLPGH Trigger: ATGACCGGGTAAAAGATGTCTTGAAATCACATCAAGCTCATGCAAGACATTTATGTGATGAGAGAGACCCAGAGAGAGAAGACGAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
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| CDS GCA 72 bp | TTTTCTTCTGTGATCTTGATGTTCTGCATTGCAGTCTaGCGTGGGATTTTTCAACTGGAGCTGAATGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FSSVILMFCIAV*RGIFQLELNGK Trigger: CTTACCATTCAGCTCCAGTTGAAAAATCCCACGGCAGACTGCAATGCAGAACATCAAGATCACAGAAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038868.14 ENSMUST00000084354.4 |
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| CDS CAA 72 bp | GGGAAAAGTGGCTGGGACACATTGTGTCTTTTTGTATaGGCCAAACACACAGATACTAAGATAGATGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GKSGWDTLCLFV*AKHTDTKIDVL Trigger: GAGGACATCTATCTTAGTATCTGTGTGTTTGGCCAATACAAAAAGACACAATGTGTCCCAGCCACTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038868.14 ENSMUST00000070513.13 ENSMUST00000084354.4 ENSMUST00000153746.8 |
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| CDS CAA 72 bp | CTTCTCTCTCTGGGTCTCTCTCATCACATAAATGTCTaGCATGAGCTTGATGTGATTTCAAGACATCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLSLGLSHHINV*HELDVISRHLL Trigger: TAAAAGATGTCTTGAAATCACATCAAGCTCATGCAAGACATTTATGTGATGAGAGAGACCCAGAGAGAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038868.14 |
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