Pregenerated sensors for SPATA5L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000118663Ensembl transcript IDs: ENSMUST00000239506.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGGCAACGAGATCCTCAGCGGCGAGCCCAGGCGCGCACCCAAGCTaGGGAAGGCGGCCGGCCCCAGGCGGCAGCGCTGGGTGTCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: RATRSSAASPGAHPS*GRRPAPGGSAGCPG Trigger: ACCGGGACACCCAGCGCTGCCGCCTGGGGCCGGCCGCCTTCCGCAGCTTGGGTGCGCGCCTGGGCTCGCCGCTGAGGATCTCGTTGCCCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | CCCGTGGCCACCCGGGCCCCGGGGCTAGCGCACTGCGGGTCCAGCTaGACAAAGCCATCCACCCTGTCGCGCCGCGGCCAGGCCGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PVATRAPGLAHCGSS*TKPSTLSRRGQAVQ Trigger: CTGCACGGCCTGGCCGCGGCGCGACAGGGTGGATGGCTTTGTGCAGCTGGACCCGCAGTGCGCTAGCCCCGGGGCCCGGGTGGCCACGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | TCGTGCACTACCTCCAGCACCGCGGCGGAACTCGGGGCTCCCGCCTaGGGCCGCAGCACCGGCCACACCTCTAGGCGCCGCAGGGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SCTTSSTAAELGAPA*GRSTGHTSRRRRGG Trigger: TCCGCCCCTGCGGCGCCTAGAGGTGTGGCCGGTGCTGCGGCCCCAGGCGGGAGCCCCGAGTTCCGCCGCGGTGCTGGAGGTAGTGCACGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | AAGATGCGCCGCACGTTCTCCTCGGTCTCCCCGGGCCGGGAGCCCTaGAACGCCGGGGCGCTCACCGCCAGCAGCTCGGCGCCAGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: KMRRTFSSVSPGREP*NAGALTASSSAPVS Trigger: CGAGACTGGCGCCGAGCTGCTGGCGGTGAGCGCCCCGGCGTTGCAGGGCTCCCGGCCCGGGGAGACCGAGGAGAACGTGCGGCGCATCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | CCAGCTGCACAAAGCCATCCACCCTGTCGCGCCGCGGCCAGGCCGTaGAGAGGCAGCAGCCGCCGGCGGGCAACGAGATCCTCAGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: PAAQSHPPCRAAARP*RGSSRRRATRSSAA Trigger: CGCCGCTGAGGATCTCGTTGCCCGCCGGCGGCTGCTGCCTCTGCACGGCCTGGCCGCGGCGCGACAGGGTGGATGGCTTTGTGCAGCTGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | GGAGGCTGGGTCCGCGGCTGGCCAGCTCCTGGGCTCGTTGGAAGATaGGCCGCACGTTCTCCTCGGTCTCCCCGGGCCGGGAGCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GGWVRGWPAPGLVGR*AARSPRSPRAGSPA Trigger: TGCAGGGCTCCCGGCCCGGGGAGACCGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | CACCCGGCGGGGTGGTCACCACGTGTCCCCGAGACACAGGCCGGTTaGGCAGCAGCTCGTGCACTACCTCCAGCACCGCGGCGGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: HPAGWSPRVPETQAG*AAARALPPAPRRNS Trigger: CGAGTTCCGCCGCGGTGCTGGAGGTAGTGCACGAGCTGCTGCGCAACCGGCCTGTGTCTCGGGGACACGTGGTGACCACCCCGCCGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | AGGAAGAGGAGGCTGGGTCCGCGGCTGGCCAGCTCCTGGGCTCGTTaGAAGATGCGCCGCACGTTCTCCTCGGTCTCCCCGGGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RKRRLGPRLASSWAR*KMRRTFSSVSPGRE Trigger: CTCCCGGCCCGGGGAGACCGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | AGCAGCGTCAACACCTGGGCCACCACTCGGCTCTCGGGAGCTCGGTaGGGGCCGCCTCTCCGGGGACACAGGGCATCCACTTCGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSVNTWATTRLSGAR*GPPLRGHRASTSSR Trigger: CCTGGACGAAGTGGATGCCCTGTGTCCCCGGAGAGGCGGCCCGCACCGAGCTCCCGAGAGCCGAGTGGTGGCCCAGGTGTTGACGCTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | ACTTCGTCCAGGAAGAGGAGGCTGGGTCCGCGGCTGGCCAGCTCCTaGGCTCGTTGGAAGATGCGCCGCACGTTCTCCTCGGTCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: TSSRKRRLGPRLASS*ARWKMRRTFSSVSP Trigger: CGGGGAGACCGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCTGGACGAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | ACAAACTCCCTGTCCCTGTGGATGCCGTCCAGCAGCGTCAACACCTaGGCCACCACTCGGCTCTCGGGAGCTCGGTGCGGGCCGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TNSLSLWMPSSSVNT*ATTRLSGARCGPPL Trigger: GAGAGGCGGCCCGCACCGAGCTCCCGAGAGCCGAGTGGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAGGGAGTTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | GCCGGTTGGTGGCTCCCACAACCACAAACTCCCTGTCCCTGTGGATaGCGTCCAGCAGCGTCAACACCTGGGCCACCACTCGGCTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: AGWWLPQPQTPCPCG*RPAASTPGPPLGSR Trigger: CCGAGAGCCGAGTGGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | ACAGGGCATCCACTTCGTCCAGGAAGAGGAGGCTGGGTCCGCGGCTaGCCAGCTCCTGGGCTCGTTGGAAGATGCGCCGCACGTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TGHPLRPGRGGWVRG*PAPGLVGRCAARSP Trigger: AGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCTGGACGAAGTGGATGCCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | TCTGGCCGGTTGGTGGCTCCCACAACCACAAACTCCCTGTCCCTGTaGATGCCGTCCAGCAGCGTCAACACCTGGGCCACCACTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SGRLVAPTTTNSLSL*MPSSSVNTWATTRL Trigger: GAGCCGAGTGGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | TGCCCGGCCTGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTTGGTaGCTCCCACAACCACAAACTCCCTGTCCCTGTGGATGCCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: CPACEALGLTRLAGW*LPQPQTPCPCGCRP Trigger: TGGACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCAGGCCGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | ACCTGCCCGGCCTGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTTaGTGGCTCCCACAACCACAAACTCCCTGTCCCTGTGGATGCCGT | + |
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Preference number: 5 (lower is better) Translates to: TCPACEALGLTRLAG*WLPQPQTPCPCGCR Trigger: ACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCAGGCCGGGCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | TCAGCAGAACTGAAAGAACTCGCTCCCGAGCGTCACATCCCGAGGTaGCGACTGAGCGAGACCCCAAGACTGAGTCAATTTCATCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SAELKELAPERHIPR*RLSETPRLSQFHPE Trigger: TTCTGGATGAAATTGACTCAGTCTTGGGGTCTCGCTCAGTCGGCACCTCGGGATGTGACGCTCGGGAGCGAGTTCTTTCAGTTCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | CTTCTCATTCTTGAGAAGGGCACACATGGCAGCCTCCCTACAGAGTaGTGTCAGGTCAGCACCAACATAGCCAACCGTCATTTCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLILEKGTHGSLPTE*CQVSTNIANRHFCQ Trigger: CTGGCAGAAATGACGGTTGGCTATGTTGGTGCTGACCTGACAGCACTCTGTAGGGAGGCTGCCATGTGTGCCCTTCTCAAGAATGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | ACACACTGCTTTAACTTCAGCTTTACGTCTTCAAGGCCACCTATCTaGTCCCAGCCAACAGGCTTGATGTCCATCAGTCCAGTGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: THCFNFSFTSSRPPI*SQPTGLMSISPVEL Trigger: AAGTTCCACTGGACTGATGGACATCAAGCCTGTTGGCTGGGAGCAGATAGGTGGCCTTGAAGACGTAAAGCTGAAGTTAAAGCAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 90 bp | GTGAAGTGCTCCTGTCTCACTGTGGTTGCTTCCAGTCCGTTTTCTTaGAGAGCAAACAAGGCAGCTTCTTTGCAGAGGTTTCTAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: VKCSCLTVVASSPFS*RANKAASLQRFLRS Trigger: TGATCTTAGAAACCTCTGCAAAGAAGCTGCCTTGTTTGCTCTGCAAGAAAACGGACTGGAAGCAACCACAGTGAGACAGGAGCACTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 90 bp | CCAAGACTGAGTCAATTTCATCCAGAAACACAAGCGCTGGAGTATTaGCTCTTGCTTGTCGAAATACCTGAGACAAGACTTTTTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PRLSQFHPETQALEY*LLLVEIPETRLFLS Trigger: ACTCAGAAAAAGTCTTGTCTCAGGTATTTCGACAAGCAAGAGCCAATACTCCAGCGCTTGTGTTTCTGGATGAAATTGACTCAGTCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | AGATCCTCAGCGGCGAGCCCAGGCGCGCACCCAAGCTaGGGAAGGCGGCCGGCCCCAGGCGGCAGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSSAASPGAHPS*GRRPAPGGSAG Trigger: CCCAGCGCTGCCGCCTGGGGCCGGCCGCCTTCCGCAGCTTGGGTGCGCGCCTGGGCTCGCCGCTGAGGATCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | CGCACGTTCTCCTCGGTCTCCCCGGGCCGGGAGCCCTaGAACGCCGGGGCGCTCACCGCCAGCAGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RTFSSVSPGREP*NAGALTASSSA Trigger: CGCCGAGCTGCTGGCGGTGAGCGCCCCGGCGTTGCAGGGCTCCCGGCCCGGGGAGACCGAGGAGAACGTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | AAGCTGCGGAAGGCGGCCGGCCCCAGGCGGCAGCGCTaGGTGTCCCGGTCCCGGGGATCCACCGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KLRKAAGPRRQR*VSRSRGSTGSS Trigger: GCTGCTGCCGGTGGATCCCCGGGACCGGGACACCCAGCGCTGCCGCCTGGGGCCGGCCGCCTTCCGCAGCTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | ACCTCCAGCACCGCGGCGGAACTCGGGGCTCCCGCCTaGGGCCGCAGCACCGGCCACACCTCTAGGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TSSTAAELGAPA*GRSTGHTSRRR Trigger: GCGGCGCCTAGAGGTGTGGCCGGTGCTGCGGCCCCAGGCGGGAGCCCCGAGTTCCGCCGCGGTGCTGGAGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | ACCCGGGCCCCGGGGCTAGCGCACTGCGGGTCCAGCTaGACAAAGCCATCCACCCTGTCGCGCCGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TRAPGLAHCGSS*TKPSTLSRRGQ Trigger: CTGGCCGCGGCGCGACAGGGTGGATGGCTTTGTGCAGCTGGACCCGCAGTGCGCTAGCCCCGGGGCCCGGGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | CTCTGGGTCCGGTGTCCCGCCCATCACGTGCAGAGCTaGGACAGGGCCGGGGACACCCGGCGGGGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LWVRCPAHHVQS*DRAGDTRRGGH Trigger: GTGACCACCCCGCCGGGTGTCCCCGGCCCTGTCGCAGCTCTGCACGTGATGGGCGGGACACCGGACCCAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | GTCCGCGGCTGGCCAGCTCCTGGGCTCGTTGGAAGATaGGCCGCACGTTCTCCTCGGTCTCCCCGGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VRGWPAPGLVGR*AARSPRSPRAG Trigger: CCCGGCCCGGGGAGACCGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 90 bp | CAGGAAGAGGAGGCTGGGTCCGCGGCTGGCCAGCTCCTGGGCTCGTaGGAAGATGCGCCGCACGTTCTCCTCGGTCTCCCCGGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: QEEEAGSAAGQLLGS*EDAPHVLLGLPGPG Trigger: TCCCGGCCCGGGGAGACCGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | AACACCTGGGCCACCACTCGGCTCTCGGGAGCTCGGTaGGGGCCGCCTCTCCGGGGACACAGGGCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: NTWATTRLSGAR*GPPLRGHRAST Trigger: AGTGGATGCCCTGTGTCCCCGGAGAGGCGGCCCGCACCGAGCTCCCGAGAGCCGAGTGGTGGCCCAGGTGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 90 bp | ACACCCGGCGGGGTGGTCACCACGTGTCCCCGAGACACAGGCCGGTaGCGCAGCAGCTCGTGCACTACCTCCAGCACCGCGGCGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: TPGGVVTTCPRDTGR*RSSSCTTSSTAAEL Trigger: GAGTTCCGCCGCGGTGCTGGAGGTAGTGCACGAGCTGCTGCGCAACCGGCCTGTGTCTCGGGGACACGTGGTGACCACCCCGCCGGGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | TGTCCCCGAGACACAGGCCGGTTGCGCAGCAGCTCGTaGACTACCTCCAGCACCGCGGCGGAACTCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CPRDTGRLRSSS*TTSSTAAELGA Trigger: AGCCCCGAGTTCCGCCGCGGTGCTGGAGGTAGTGCACGAGCTGCTGCGCAACCGGCCTGTGTCTCGGGGACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | CTGTCCCTGTGGATGCCGTCCAGCAGCGTCAACACCTaGGCCACCACTCGGCTCTCGGGAGCTCGGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LSLWMPSSSVNT*ATTRLSGARCG Trigger: CCCGCACCGAGCTCCCGAGAGCCGAGTGGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | GGGGTGGTCACCACGTGTCCCCGAGACACAGGCCGGTaGCGCAGCAGCTCGTGCACTACCTCCAGCACCGCG | + |
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Preference number: 6 (lower is better) Translates to: GVVTTCPRDTGR*RSSSCTTSSTA Trigger: CGCGGTGCTGGAGGTAGTGCACGAGCTGCTGCGCAACCGGCCTGTGTCTCGGGGACACGTGGTGACCACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | ACCTCTAGGCGCCGCAGGGGCGGACAGGGCACGGGTTaGAAGCAGTCCATACCTATCCTCCCCGTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TSRRRRGGQGTG*KQSIPILPVAT Trigger: GGTGGCCACGGGGAGGATAGGTATGGACTGCTTGCAACCCGTGCCCTGTCCGCCCCTGCGGCGCCTAGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | TGTGGCGGAGGCTTGTCACTGAGCGTGATGCGGGTATaGGGTGTGACCCACCCGCCGGGCTCTGGGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: CGGGLSLSVMRV*GVTHPPGSGSG Trigger: ACCGGACCCAGAGCCCGGCGGGTGGGTCACACCGCATACCCGCATCACGCTCAGTGACAAGCCTCCGCCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | AGGAAGAGGAGGCTGGGTCCGCGGCTGGCCAGCTCCTaGGCTCGTTGGAAGATGCGCCGCACGTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RKRRLGPRLASS*ARWKMRRTFSS Trigger: CGAGGAGAACGTGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | CCACTTCGTCCAGGAAGAGGAGGCTGGGTCCGCGGCTaGCCAGCTCCTGGGCTCGTTGGAAGATGCGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: PLRPGRGGWVRG*PAPGLVGRCAA Trigger: TGCGGCGCATCTTCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCTGGACGAAGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | GACACAGGGCATCCACTTCGTCCAGGAAGAGGAGGCTaGGTCCGCGGCTGGCCAGCTCCTGGGCTCGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: DTGHPLRPGRGG*VRGWPAPGLVG Trigger: TCCAACGAGCCCAGGAGCTGGCCAGCCGCGGACCCAGCCTCCTCTTCCTGGACGAAGTGGATGCCCTGTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 90 bp | AACCTGCCCGGCCTGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTaGGTGGCTCCCACAACCACAAACTCCCTGTCCCTGTGGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: NLPGLRSAGSNSSGR*VAPTTTNSLSLWMP Trigger: CGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCAGGCCGGGCAGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | GGCCTGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTaGGTGGCTCCCACAACCACAAACTCCCTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLRSAGSNSSGR*VAPTTTNSLSL Trigger: CAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | TGGCTCCCACAACCACAAACTCCCTGTCCCTGTGGATaGCGTCCAGCAGCGTCAACACCTGGGCCACCACTC | + |
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Preference number: 6 (lower is better) Translates to: WLPQPQTPCPCG*RPAASTPGPPL Trigger: GAGTGGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | TTGGTGGCTCCCACAACCACAAACTCCCTGTCCCTGTaGATGCCGTCCAGCAGCGTCAACACCTGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: LVAPTTTNSLSL*MPSSSVNTWAT Trigger: GGTGGCCCAGGTGTTGACGCTGCTGGACGGCATCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | GCCTGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTTaGTGGCTCCCACAACCACAAACTCCCTGTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ACEALGLTRLAG*WLPQPQTPCPC Trigger: ACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | TGCGAAGCGCTGGGTCTAACTCGTCTGGCCGGTTGGTaGCTCCCACAACCACAAACTCCCTGTCCCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CEALGLTRLAGW*LPQPQTPCPCG Trigger: TCCACAGGGACAGGGAGTTTGTGGTTGTGGGAGCCACCAACCGGCCAGACGAGTTAGACCCAGCGCTTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS TCA 72 bp | TCCAACAAAAGGAGAGAAGAGATCAGCTCCGCACACTaGCACGAAGGAGCAGTGGCAGCCTGTGGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SNKRREEISSAH*HEGAVAACGQG Trigger: GCCCTGGCCACAGGCTGCCACTGCTCCTTCGTGTCAGTGTGCGGAGCTGATCTCTTCTCTCCTTTTGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | CTGAAAGAACTCGCTCCCGAGCGTCACATCCCGAGGTaGCGACTGAGCGAGACCCCAAGACTGAGTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: LKELAPERHIPR*RLSETPRLSQF Trigger: AAATTGACTCAGTCTTGGGGTCTCGCTCAGTCGGCACCTCGGGATGTGACGCTCGGGAGCGAGTTCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS TCA 72 bp | CTTCAAGGCCACCTATCTGCTCCCAGCCAACAGGCTTaGTGTCCATCAGTCCAGTGGAACTTCGAAATGATG | + |
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Preference number: 6 (lower is better) Translates to: LQGHLSAPSQQA*CPSVQWNFEMM Trigger: CATCATTTCGAAGTTCCACTGGACTGATGGACATCAAGCCTGTTGGCTGGGAGCAGATAGGTGGCCTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | GAGTGCTTCTGTGAAGTGCTCCTGTCTCACTGTGGTTaGTTCCAGTCCGTTTTCTTGCAGAGCAAACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ECFCEVLLSHCG*FQSVFLQSKQG Trigger: GCCTTGTTTGCTCTGCAAGAAAACGGACTGGAAGCAACCACAGTGAGACAGGAGCACTTCACAGAAGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | AAGGATGGCTTCACAGTCTTGAGTGCTTCTGTGAAGTaGTCCTGTCTCACTGTGGTTGCTTCCAGTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: KDGFTVLSASVK*SCLTVVASSPF Trigger: AAACGGACTGGAAGCAACCACAGTGAGACAGGAGCACTTCACAGAAGCACTCAAGACTGTGAAGCCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | TCTTCAAGGCCACCTATCTGCTCCCAGCCAACAGGCTaGATGTCCATCAGTCCAGTGGAACTTCGAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: SSRPPICSQPTG*MSISPVELRND Trigger: ATCATTTCGAAGTTCCACTGGACTGATGGACATCAAGCCTGTTGGCTGGGAGCAGATAGGTGGCCTTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS GCA 72 bp | TTTAACTTCAGCTTTACGTCTTCAAGGCCACCTATCTaGTCCCAGCCAACAGGCTTGATGTCCATCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FNFSFTSSRPPI*SQPTGLMSISP Trigger: TGGACTGATGGACATCAAGCCTGTTGGCTGGGAGCAGATAGGTGGCCTTGAAGACGTAAAGCTGAAGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 90 bp | TGTGAAGTGCTCCTGTCTCACTGTGGTTGCTTCCAGTCCGTTTTCTaGCAGAGCAAACAAGGCAGCTTCTTTGCAGAGGTTTCTAAGATC | + |
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Preference number: 6 (lower is better) Translates to: CEVLLSHCGCFQSVF*QSKQGSFFAEVSKI Trigger: GATCTTAGAAACCTCTGCAAAGAAGCTGCCTTGTTTGCTCTGCAAGAAAACGGACTGGAAGCAACCACAGTGAGACAGGAGCACTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS TCA 72 bp | GCCACGACAATCATGACACTCCGACTAAGAATTTCTTaGCACTCCTGTTGGCTTGCTTTACTCCCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ATTIMTLRLRIS*HSCWLALLPLL Trigger: GAGAAGAGGGAGTAAAGCAAGCCAACAGGAGTGTCAAGAAATTCTTAGTCGGAGTGTCATGATTGTCGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | TCCTCAATTTTAGGACTGTCTTGGTTCTTCTCATTCTaGAGAAGGGCACACATGGCAGCCTCCCTACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SSILGLSWFFSF*RRAHMAASLQS Trigger: ACTCTGTAGGGAGGCTGCCATGTGTGCCCTTCTCAAGAATGAGAAGAACCAAGACAGTCCTAAAATTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | GTCAACTCTTTCAGAGTTAAGGATGGCTTCACAGTCTaGAGTGCTTCTGTGAAGTGCTCCTGTCTCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: VNSFRVKDGFTV*SASVKCSCLTV Trigger: CACAGTGAGACAGGAGCACTTCACAGAAGCACTCAAGACTGTGAAGCCATCCTTAACTCTGAAAGAGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | TGCCACGACAATCATGACACTCCGACTAAGAATTTCTaGACACTCCTGTTGGCTTGCTTTACTCCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CHDNHDTPTKNF*TLLLACFTPSS Trigger: AGAAGAGGGAGTAAAGCAAGCCAACAGGAGTGTCAAGAAATTCTTAGTCGGAGTGTCATGATTGTCGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS TCA 72 bp | CCAACCGTCATTTCTGCCAGGAGACCTAAATCAATATaGCTGGAGATGGGCATCTTTGAAGTAATCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PTVISARRPKSI*LEMGIFEVITC Trigger: GCAAGTGATTACTTCAAAGATGCCCATCTCCAGTCATATTGATTTAGGTCTCCTGGCAGAAATGACGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CCA 72 bp | AGTCAATTTCATCCAGAAACACAAGCGCTGGAGTATTaGCTCTTGCTTGTCGAAATACCTGAGACAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: SQFHPETQALEY*LLLVEIPETRL Trigger: AAGTCTTGTCTCAGGTATTTCGACAAGCAAGAGCCAATACTCCAGCGCTTGTGTTTCTGGATGAAATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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| CDS CAA 72 bp | TTTCATCCAGAAACACAAGCGCTGGAGTATTGGCTCTaGCTTGTCGAAATACCTGAGACAAGACTTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FHPETQALEYWL*LVEIPETRLFL Trigger: CAGAAAAAGTCTTGTCTCAGGTATTTCGACAAGCAAGAGCCAATACTCCAGCGCTTGTGTTTCTGGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239506.1 |
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