Pregenerated sensors for SPATA45 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057072

Ensembl transcript IDs: ENSMUST00000077889.8, ENSMUST00000192151.6

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	AGTGCCTTTTCTCCTTGTGCACAGAGAGATCATGCTTaGCCCAGGAGGTCCTGGTACTTTCGGGAACAGATT	+
Preference number: 6 (lower is better) Translates to: SAFSPCAQRDHA*PRRSWYFREQI Trigger: AATCTGTTCCCGAAAGTACCAGGACCTCCTGGGTCAAGCATGATCTCTCTGTGCACAAGGAGAAAAGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077889.8 ENSMUST00000192151.6
CDS GCA 72 bp	AGAAAGTGCCTTTTCTCCTTGTGCACAGAGAGATCATaGTTGACCCAGGAGGTCCTGGTACTTTCGGGAACA	+
Preference number: 6 (lower is better) Translates to: RKCLFSLCTERS*LTQEVLVLSGT Trigger: TGTTCCCGAAAGTACCAGGACCTCCTGGGTCAAGCATGATCTCTCTGTGCACAAGGAGAAAAGGCACTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077889.8 ENSMUST00000192151.6
CDS CAA 72 bp	AAGTGCCTTTTCTCCTTGTGCACAGAGAGATCATGCTaGACCCAGGAGGTCCTGGTACTTTCGGGAACAGAT	+
Preference number: 6 (lower is better) Translates to: KCLFSLCTERSC*TQEVLVLSGTD Trigger: ATCTGTTCCCGAAAGTACCAGGACCTCCTGGGTCAAGCATGATCTCTCTGTGCACAAGGAGAAAAGGCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077889.8 ENSMUST00000192151.6

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