Pregenerated sensors for SPATA33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048478Ensembl transcript IDs: ENSMUST00000060133.8, ENSMUST00000212161.2, ENSMUST00000212346.2, ENSMUST00000212523.2, ENSMUST00000212637.2, ENSMUST00000212760.2, ENSMUST00000212892.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCTCGATGCCGATGCCAGGCATGGTGGTGGTGGTCGCCATCTCTaGCCCATCTTTGGTGAGACATCAAACCACAGGGTGACAAAATCT | + |
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Preference number: 1 (lower is better) Translates to: VLDADARHGGGGRHL*PIFGETSNHRVTKS Trigger: AGATTTTGTCACCCTGTGGTTTGATGTCTCACCAAAGATGGGTCAGAGATGGCGACCACCACCACCATGCCTGGCATCGGCATCGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR CCA 90 bp | ATCCAGTCCCAGCACCTGGATTTCAAACTGCCTCCCCAAGACCCATaGGTGCCTCAACCTCTTTCTCAAATGAGAGGAGGGTCTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: IQSQHLDFKLPPQDP*VPQPLSQMRGGSVL Trigger: AAGCACAGACCCTCCTCTCATTTGAGAAAGAGGTTGAGGCACCCATGGGTCTTGGGGAGGCAGTTTGAAATCCAGGTGCTGGGACTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR TCA 90 bp | AATGAACGTGGGCCCAGCACCTGGGGAGTTGCAGTAAAGGGACTGTaGGTTCAAGGCCTTCCTAGAAAGGAGGTCATAACATACACGGAC | + |
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Preference number: 1 (lower is better) Translates to: NERGPSTWGVAVKGL*VQGLPRKEVITYTD Trigger: GTCCGTGTATGTTATGACCTCCTTTCTAGGAAGGCCTTGAACTCACAGTCCCTTTACTGCAACTCCCCAGGTGCTGGGCCCACGTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR GCA 90 bp | GTCATAACATACACGGACATTTACACCTGGCTTCCTCAGACCTCATaGTCTGAGGCTCCCTCCAGGGTCGCATGTGTCAGTGGCTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: VITYTDIYTWLPQTS*SEAPSRVACVSGFV Trigger: AACAAAGCCACTGACACATGCGACCCTGGAGGGAGCCTCAGAGCATGAGGTCTGAGGAAGCCAGGTGTAAATGTCCGTGTATGTTATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR GCA 90 bp | GAGCTCTCATTTATTCTGTGTTGTGTACATCATAGGCTGCTATTGTaGTGGGGCTCCTGTGTCGGTGGTAAGGACCCCAGTCGGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: ELSFILCCVHHRLLL*WGSCVGGKDPSRHA Trigger: AGCATGCCGACTGGGGTCCTTACCACCGACACAGGAGCCCCAGCACAATAGCAGCCTATGATGTACACAACACAGAATAAATGAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| 3UTR TCA 90 bp | TATAACTCCATGCCTAGCCTGTGCGGTTTTAGAATCCTTTCCAAATaGACGTGGGCCCAGCACCTGGGGAGTTGCAGTAAAGGGACTGTG | + |
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Preference number: 1 (lower is better) Translates to: YNSMPSLCGFRILSK*TWAQHLGSCSKGTV Trigger: CACAGTCCCTTTACTGCAACTCCCCAGGTGCTGGGCCCACGTTCATTTGGAAAGGATTCTAAAACCGCACAGGCTAGGCATGGAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR TCA 90 bp | GGGAGACTTATCTGGGCTACAAGTGCTGTTGATAGCAACAGGCTGTaGAGCCTCAAAGGCCAGAGCCTACAGTCACCCAATGTTCACTCA | + |
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Preference number: 1 (lower is better) Translates to: GRLIWATSAVDSNRL*SLKGQSLQSPNVHS Trigger: TGAGTGAACATTGGGTGACTGTAGGCTCTGGCCTTTGAGGCTTCACAGCCTGTTGCTATCAACAGCACTTGTAGCCCAGATAAGTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR TCA 90 bp | AACTGCCTCCCCAAGACCCATGGGTGCCTCAACCTCTTTCTCAAATaGGAGGAGGGTCTGTGCTTTCTACCTCCAATCCTTCTCAACTGT | + |
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Preference number: 1 (lower is better) Translates to: NCLPKTHGCLNLFLK*EEGLCFLPPILLNC Trigger: ACAGTTGAGAAGGATTGGAGGTAGAAAGCACAGACCCTCCTCTCATTTGAGAAAGAGGTTGAGGCACCCATGGGTCTTGGGGAGGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR CCA 90 bp | CCTCAGGTGTTAAGATTCCAGGCATGTGCTACCATGTCTGCTTTATaGGGCGCTGGTGAAGGAACCCACACCTTTGTGCTTCTTGTATGG | + |
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Preference number: 1 (lower is better) Translates to: PQVLRFQACATMSAL*GAGEGTHTFVLLVW Trigger: CCATACAAGAAGCACAAAGGTGTGGGTTCCTTCACCAGCGCCCCATAAAGCAGACATGGTAGCACATGCCTGGAATCTTAACACCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR TCA 90 bp | TGCCAGGCATGGTGGTGGTGGTCGCCATCTCTGACCCATCTTTGGTaGGACATCAAACCACAGGGTGACAAAATCTTGTTTAGTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CQAWWWWSPSLTHLW*DIKPQGDKILFSWL Trigger: AAGCCAACTAAACAAGATTTTGTCACCCTGTGGTTTGATGTCTCACCAAAGATGGGTCAGAGATGGCGACCACCACCACCATGCCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR TCA 90 bp | TTACAAACTTGTAGAGCTGGAGCCATCTTAGAGAGGCTGGGCAGATaGAGCCTATCTCAGAAAGGCTTCCTTGCCAATAGCAAGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LQTCRAGAILERLGR*SLSQKGFLANSKQG Trigger: GCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAGATAGGCTTCATCTGCCCAGCCTCTCTAAGATGGCTCCAGCTCTACAAGTTTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR GCA 90 bp | AGGGCCTTCAGCATGCTAGGCAACTGCTCTGCCATAGAGCTACACTaGAGTCTACACCGCAGTCCATGGTCAGTTCTTCATTATTATCAT | + |
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Preference number: 1 (lower is better) Translates to: RAFSMLGNCSAIELH*SLHRSPWSVLHYYH Trigger: ATGATAATAATGAAGAACTGACCATGGACTGCGGTGTAGACTGCAGTGTAGCTCTATGGCAGAGCAGTTGCCTAGCATGCTGAAGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CCA 90 bp | ACTGCTGAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTaGTTTTCTCTTCATGTCCACCTGCATTTCCTCCAGATGTTGACG | + |
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Preference number: 1 (lower is better) Translates to: TAEPAPSSFLDTRLT*FSLHVHLHFLQMLT Trigger: CGTCAACATCTGGAGGAAATGCAGGTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CCA 90 bp | AACTGCTCTGCCATAGAGCTACACTGCAGTCTACACCGCAGTCCATaGTCAGTTCTTCATTATTATCATCTACTATCCAAACTGACTGTG | + |
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Preference number: 1 (lower is better) Translates to: NCSAIELHCSLHRSP*SVLHYYHLLSKLTV Trigger: CACAGTCAGTTTGGATAGTAGATGATAATAATGAAGAACTGACCATGGACTGCGGTGTAGACTGCAGTGTAGCTCTATGGCAGAGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CCA 90 bp | ATATCACGTATGTATGTATGTATGTATGTATATCATGTGCATATCTaGTGCCCACAGAGGTCAGAAGATGGCACTGATTCCCCTGGAACT | + |
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Preference number: 1 (lower is better) Translates to: ISRMYVCMYVYHVHI*CPQRSEDGTDSPGT Trigger: AGTTCCAGGGGAATCAGTGCCATCTTCTGACCTCTGTGGGCACCAGATATGCACATGATATACATACATACATACATACATACGTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCAGATAGCAACAGGCTGTaGAGCCTCAAAGGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GATQGLRCWGLLLSMQGPDSNRL*SLKGQS Trigger: GCTCTGGCCTTTGAGGCTTCACAGCCTGTTGCTATC...TGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGTGGCTTTGTTCCTGTaGCTGCTGAGCCTGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GHTGPEVLGVAALYAGSIVALFL*LLSLLH Trigger: ATGGAGCAGGCTCAGCAGTCACAGGAACAAAGCCAC...AATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGGGTTCCCAACTATGGTaGAACCCAGAGCCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATQGLRCWGLLLSMQGPLGSQLW*NPEPQR Trigger: CCTCTGAGGCTCTGGGTTGCACCATAGTTGGGAACC...CAATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAACCCAGGGCCTTCAGCATGCTAGGCAACTGCTCTGCCATAGAGCTACACCTAGGCAGTGTCACTTaGGGTCCCATGCTTGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: TEPRAFSMLGNCSAIELHLGSVT*GPMLGV Trigger: CACGCCAAGCATGGGACCTCAAGTGACACTGCCTAG...GTGTAGCTCTATGGCAGAGCAGTTGCCTAGCATGCTGAAGGCCCTGGGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGGGAGTGCTCTGGAAGTaGCAGGCAAATTTCCACTCT | + |
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Preference number: 2 (lower is better) Translates to: ATQGLRCWGLLLSMQGPLGVLWK*QANFHS Trigger: AGAGTGGAAATTTGCCTGTCACTTCCAGAGCACTCC...CAATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTTTTGCCCACACCTCTTCTCCCTGTTCCTTTAACCCTAACATCTGGCACTCTTTGTGGCCAGGCTaGGGGACACCAAGCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPFAHTSSPCSFNPNIWHSLWPG*GTPSPL Trigger: GAGAGGGCTTGGTGTCCCTCAGCCTGGCCACAAAGA...GTGCCAGATGTTAGGGTTAAAGGAACAGGGAGAAGAGGTGTGGGCAAAAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGCAATGTTGCCCAAGTTaGGCTCACATGATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ATQGLRCWGLLLSMQGPLQCCPS*AHMILL Trigger: CAGGAGGATCATGTGAGCCCAACTTGGGCAACATTG...CAATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCCTTGGCCTTCTGAGCTTGGGGATCACAGGAGTGCTCTGGAAGTGACAGGCAAAAGCAGCAAGAGGTaGCCCCCTGTTCCCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: RPWPSELGDHRSALEVTGKSSKR*PPVPFT Trigger: TGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTT...GCCTGTCACTTCCAGAGCACTCCTGTGATCCCCAAGCTCAGAAGGCCAAGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTTTTGCCCACACCTCTTCTCCCTGTTCCTTTAACCCTAACATCTGGCACCTTCCTCAGACCTCATaGTCTGAGGCTCCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PPFAHTSSPCSFNPNIWHLPQTS*SEAPSR Trigger: CCTGGAGGGAGCCTCAGAGCATGAGGTCTGAGGAAG...GTGCCAGATGTTAGGGTTAAAGGAACAGGGAGAAGAGGTGTGGGCAAAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATCTAGGCAGTGTCACTTaGGGTCCCATGCTTGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: MGQRLRTGLSRQCHLRSHLGSVT*GPMLGV Trigger: CACGCCAAGCATGGGACCTCAAGTGACACTGCCTAG...ATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAAGGCCTTGGCAGTTTCTGGTGTCTaGCAAATGCTGGGTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: TGVTGGLQMGSSSLAKALAVSGV*QMLGVK Trigger: TTTCACACCCAGCATTTGGCAGACACCAGAAACTGC...CAAGGCCTTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATGAAGCCTATCTCAGAAAGGCTTCCTTGCCAATAGCAAGCAAGGCCCCAAATGACAGCTTCCTCTaGACTCACGCTCCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ADEAYLRKASLPIASKAPNDSFL*THAPPA Trigger: GGCAGGAGGAGCGTGAGTTCAGAGGAAGCTGTCATT...TGGGGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAGATAGGCTTCATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGGATAGCAACAGGCTGTaGAGCCTCAAAGGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LQLLPCLCAEGIRSCGAQDSNRL*SLKGQS Trigger: GCTCTGGCCTTTGAGGCTTCACAGCCTGTTGCTATC...CTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGATAGCAACAGGCTGTaGAGCCTCAAAGGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPLQLLPCLCAEGIRSCGDSNRL*SLKGQS Trigger: GCTCTGGCCTTTGAGGCTTCACAGCCTGTTGCTATC...CCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAGAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCATGCCTAGCCTGTGCGGTTTTAGAATCCTTTCCAAATGAACGTGGGCCCCGGTCCTTTCTACCTTaGGACGCCCTCCCATCTTTG | + |
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Preference number: 2 (lower is better) Translates to: TPCLACAVLESFPNERGPRSFLP*DALPSL Trigger: CAAAGATGGGAGGGCGTCTCAAGGTAGAAAGGACCG...GGGCCCACGTTCATTTGGAAAGGATTCTAAAACCGCACAGGCTAGGCATGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTGGTGGTCGCCATCTCTaGCCCATCTTTGGTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GLSRQCHLRSHAWRGWIIGGRHL*PIFGET Trigger: TGTCTCACCAAAGATGGGTCAGAGATGGCGACCACC...AATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCAACACCTGACTCCAAATaGTTGCAGCTTAAAATAACT | + |
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Preference number: 2 (lower is better) Translates to: GATQGLRCWGLLLSMQGPTPDSK*LQLKIT Trigger: AGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGT...TGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCCCCATCTGCATAGCATaGAGGCATCTTCCGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QTVAKAARGGPLFPLHGFPICIA*RHLPPE Trigger: CTCTGGCGGAAGATGCCTGCATGCTATGCAGATGGG...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATAGAATCCTTTCCAAATaGACGTGGGCCCAGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: MGQRLRTGLSRQCHLRSHRILSK*TWAQHL Trigger: CAGGTGCTGGGCCCACGTTCATTTGGAAAGGATTCT...ATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTAGAATCCTTTCCAAATaGACGTGGGCCCAGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: GLSRQCHLRSHAWRGWIIRILSK*TWAQHL Trigger: CAGGTGCTGGGCCCACGTTCATTTGGAAAGGATTCT...AATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATAGGGCCACACAGGGCCTaGGGTGTTGGGGGTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MVSDLLELKLKVVVSYPIGPHRA*GVGGCC Trigger: GCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCC...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTCAGCACCTGGGGAGTTaGAGTAAAGGGACTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GLSRQCHLRSHAWRGWIIQHLGS*SKGTVS Trigger: ACTCACAGTCCCTTTACTGCAACTCCCCAGGTGCTG...AATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAACCCAGGGCCTTCAGCATGCTAGGCAACTGCTCTGCCATAGAGCTACACCATGTGCATATCTGGTaGCCACAGAGGTCAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TEPRAFSMLGNCSAIELHHVHIW*PQRSED Trigger: ATCTTCTGACCTCTGTGGGCACCAGATATGCACATG...GTGTAGCTCTATGGCAGAGCAGTTGCCTAGCATGCTGAAGGCCCTGGGTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTCAGATTATGAATTTGTaGATGAATGCACTGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: GHTGPEVLGVAALYAGSIQIMNL*MNALPT Trigger: TGTGGGCAGTGCATTCATGCACAAATTCATAATCTG...AATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTTCCTTTAACCCTAACATCTGGCACGCAGGTCTGTTCCTCACCTCTCTAACCATGTCTGCTTTATaGGGCGCTGGTGAAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: PCSFNPNIWHAGLFLTSLTMSAL*GAGEGT Trigger: GGTTCCTTCACCAGCGCCCCATAAAGCAGACATGGT...TAGAGAGGTGAGGAACAGACCTGCGTGCCAGATGTTAGGGTTAAAGGAACAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCAGTAAAGGGACTGTaGGTTCAAGGCCTTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: PPLQLLPCLCAEGIRSCGAVKGL*VQGLPR Trigger: TCTAGGAAGGCCTTGAACTCACAGTCCCTTTACTGC...CCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAGAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGCCTGCCTCAGTCTCCTaGGTAGCTGGCACTATAACT | + |
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Preference number: 2 (lower is better) Translates to: SRQCHLRSHAWRGWIISRPASVS*VAGTIT Trigger: AGTTATAGTGCCAGCTACTCAGGAGACTGAGGCAGG...CCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCCTCTCCCTAGGGCTTTaGAAACACAGGGTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: QTVAKAARGGPLFPLHGFLSLGL*KHRVSQ Trigger: TTGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAGAG...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCAACTATGGTGCAACCCAGAGCCTCAGAGGTGGACAACCATGGGTTAGTTCTCTCCCTAGGGCTTTaGAAACACAGGGTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: FPTMVQPRASEVDNHGLVLSLGL*KHRVSQ Trigger: TTGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAGAG...AACTAACCCATGGTTGTCCACCTCTGAGGCTCTGGGTTGCACCATAGTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTCAGACCTCAGAAATCCAGTCCCAGCACCTGGATTTCAAACTGCCTCCCCTCCATGCCTAGCCTGTaGGGTTTTAGAATCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KVRPQKSSPSTWISNCLPSMPSL*GFRILS Trigger: GGAAAGGATTCTAAAACCGCACAGGCTAGGCATGGA...GGGGAGGCAGTTTGAAATCCAGGTGCTGGGACTGGATTTCTGAGGTCTGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCCCCAAGACCCATGGGTaGCTCAACCTCTTTCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QTVAKAARGGPLFPLHGFPKTHG*LNLFLK Trigger: TTTGAGAAAGAGGTTGAGGCACCCATGGGTCTTGGG...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR CAA 90 bp | GTTATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTaGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VMGQRLRTGLSRQCH*RSHAWRGWIISRLC Trigger: ACACAGCCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAACTATGGTGCAACCCAGAGCCTCAGAGGTGGACAACCATGGGTTAGTTTCCATGCCTAGCCTGTaGGGTTTTAGAATCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FPTMVQPRASEVDNHGLVSMPSL*GFRILS Trigger: GGAAAGGATTCTAAAACCGCACAGGCTAGGCATGGA...AACTAACCCATGGTTGTCCACCTCTGAGGCTCTGGGTTGCACCATAGTTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCTTTTGCCCACACCTCTTCTCCCTGTTCCTTTAACCCTAACATCTGGCACGACACCAGACTCACTTaGTTTTCTCTTCATGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PPFAHTSSPCSFNPNIWHDTRLT*FSLHVH Trigger: GTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTC...GTGCCAGATGTTAGGGTTAAAGGAACAGGGAGAAGAGGTGTGGGCAAAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTGTTACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGCGTGGGCCCAGCACCTaGGGAGTTGCAGTAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: CCVTPDSKCLQLKITCLSRGPST*GVAVKG Trigger: TCCCTTTACTGCAACTCCCCAGGTGCTGGGCCCACG...CGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CAA 90 bp | CCACACCTTTGTGCTTCTTGTATGGTAGACACTCTCCCTAGGGCTTaGAAAACACAGGGTCTCACAATGTTGCCCAAGTTGGGCTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: PHLCASCMVDTLPRA*KTQGLTMLPKLGSH Trigger: ATGTGAGCCCAACTTGGGCAACATTGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAGAGTGTCTACCATACAAGAAGCACAAAGGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGTTTTCTCTTCATGTCCGAGAGGCTGGGCAGATaGAGCCTATCTCAGAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLHHLFLTPDSLGFLFMSERLGR*SLSQKG Trigger: GCCTTTCTGAGATAGGCTTCATCTGCCCAGCCTCTC...GGACATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATAACCTCTTTCTCAAATaGGAGGAGGGTCTGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: MGQRLRTGLSRQCHLRSHNLFLK*EEGLCF Trigger: AAAGCACAGACCCTCCTCTCATTTGAGAAAGAGGTT...ATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGTGACTGCTGAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGGACACCAGACTCACTTaGTTTTCTCTTCATGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PVTAEPAPSSFLDTRLTWDTRLT*FSLHVH Trigger: GTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTC...CCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGTCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGAACATTCAACATTGTCCTCCCCAAGACCCATaGGTGCCTCAACCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLCAEGIRSCGAQNIQHCPPQDP*VPQPLS Trigger: AGAAAGAGGTTGAGGCACCCATGGGTCTTGGGGAGG...ACAATGTTGAATGTTCTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAAGATGGTGGCTTTGTTCCTGTaGCTGCTGAGCCTGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CVCQIMNLCMNALPTHKMVALFL*LLSLLH Trigger: ATGGAGCAGGCTCAGCAGTCACAGGAACAAAGCCAC...CATCTTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTGGAAGTGACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCGGCACTATAACTCCATaGCTAGCCTGTGCGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: ALEVTGKFPLSVTIYPLIGTITP*LACAVL Trigger: TAAAACCGCACAGGCTAGGCATGGAGTTATAGTGCC...GATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACTTCCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGTATCATGTGCATATCTaGTGCCCACAGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SRQCHLRSHAWRGWIISRYHVHI*CPQRSE Trigger: TTCTGACCTCTGTGGGCACCAGATATGCACATGATA...CCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATACAGGGCCTGAGGTGTTaGGGGTTGCTGCTCTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: MVSDLLELKLKVVVSYPIQGLRC*GLLLSM Trigger: CATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTG...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACGTGGCTTTGTTCCTGTaGCTGCTGAGCCTGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDVALFL*LLSLLH Trigger: ATGGAGCAGGCTCAGCAGTCACAGGAACAAAGCCAC...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGAGAATCCTTTCCAAATaGACGTGGGCCCAGCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: CCVTPDSKCLQLKITCLSRILSK*TWAQHL Trigger: CAGGTGCTGGGCCCACGTTCATTTGGAAAGGATTCT...CGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGCCTGCCTCAGTCTCCTaGGTAGCTGGCACTATAACT | + |
|
Preference number: 2 (lower is better) Translates to: CCVTPDSKCLQLKITCLSPASVS*VAGTIT Trigger: AGTTATAGTGCCAGCTACTCAGGAGACTGAGGCAGG...CGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGCAGCACCTGGGGAGTTaGAGTAAAGGGACTGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SDRQISTLCHHLPLDLNMQHLGS*SKGTVS Trigger: ACTCACAGTCCCTTTACTGCAACTCCCCAGGTGCTG...CATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATTGTATGTATATCATGTaGATATCTGGTGCCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: MGQRLRTGLSRQCHLRSHCMYIM*ISGAHR Trigger: TCTGTGGGCACCAGATATGCACATGATATACATACA...ATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGAAGCCTATCTCAGAAAGGCTTCCTTGCCAATAGCAAGCAAGGCCCCATGTATGTATATCATGTaGATATCTGGTGCCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: ADEAYLRKASLPIASKAPCMYIM*ISGAHR Trigger: TCTGTGGGCACCAGATATGCACATGATATACATACA...TGGGGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAGATAGGCTTCATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACGGGAGCAGCCCCATCTaGATAGCATGCAGGCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDGSSPI*IACRHL Trigger: AAGATGCCTGCATGCTATGCAGATGGGGCTGCTCCC...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGACGTTTCCTTCTGTGTaGCCATACCAAGCTACTATA | + |
|
Preference number: 2 (lower is better) Translates to: SRQCHLRSHAWRGWIISRTFPSV*PYQATI Trigger: TATAGTAGCTTGGTATGGCCACACAGAAGGAAACGT...CCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR CAA 90 bp | ACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTaGTTATGGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TPDSKCLQLKITCLS*LWVRDLGQACLGSV Trigger: GACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CAA 90 bp | TTGTGCATGAATGCACTGCCCACACACAAGATGGTATCTGATCTCTaGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATATGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCMNALPTHKMVSDL*ELKLKVVVSYPIWV Trigger: CACCCATATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCATCTTGTGTGTGGGCAGTGCATTCATGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | GACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTTGTTCCTGTGACTGCTaGGCCTGCTCCATCATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: DRQISTLCHHLPLDLNMTCSCDC*ACSIIF Trigger: AAAGATGATGGAGCAGGCTCAGCAGTCACAGGAACA...AGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTACGGACATTTACACCTaGCTTCCTCAGACCTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: DRQISTLCHHLPLDLNMTTDIYT*LPQTSC Trigger: GCATGAGGTCTGAGGAAGCCAGGTGTAAATGTCCGT...AGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGCAATGTTGCCCAAGTTaGGCTCACATGATCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SDRQISTLCHHLPLDLNMQCCPS*AHMILL Trigger: CAGGAGGATCATGTGAGCCCAACTTGGGCAACATTG...CATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATAACCATGTCTGCTTTATaGGGCGCTGGTGAAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: MVSDLLELKLKVVVSYPITMSAL*GAGEGT Trigger: GGTTCCTTCACCAGCGCCCCATAAAGCAGACATGGT...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TATATGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAACCTGCCTCAGTCTCCTaGGTAGCTGGCACTATAACT | + |
|
Preference number: 2 (lower is better) Translates to: YMCVSDYEFVHECTAHTQPASVS*VAGTIT Trigger: AGTTATAGTGCCAGCTACTCAGGAGACTGAGGCAGG...TTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAAGATGGGCACTATAACTCCATaGCTAGCCTGTGCGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CVCQIMNLCMNALPTHKMGTITP*LACAVL Trigger: TAAAACCGCACAGGCTAGGCATGGAGTTATAGTGCC...CATCTTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTCATGTGCATATCTGGTaGCCACAGAGGTCAGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DRQISTLCHHLPLDLNMTHVHIW*PQRSED Trigger: ATCTTCTGACCTCTGTGGGCACCAGATATGCACATG...AGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACGTCAATCCAGGAAACTaGCATTGTTCCCGTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDVNPGN*HCSREC Trigger: ACACTCACGGGAACAATGTCAGTTTCCTGGATTGAC...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TATATGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAACAATGTTGCCCAAGTTaGGCTCACATGATCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YMCVSDYEFVHECTAHTQQCCPS*AHMILL Trigger: CAGGAGGATCATGTGAGCCCAACTTGGGCAACATTG...TTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTGTTACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTATCATGTGCATATCTaGTGCCCACAGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CCVTPDSKCLQLKITCLSYHVHI*CPQRSE Trigger: TTCTGACCTCTGTGGGCACCAGATATGCACATGATA...CGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TATATGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAATCCATGTCTATGTGCTaGAGGGATCAGATCATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YMCVSDYEFVHECTAHTQSMSMC*RDQIMW Trigger: CCACATGATCTGATCCCTTCAGCACATAGACATGGA...TTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATAGCCAAATGCTGGGTGTaGAAAGAAACACTTTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MVSDLLELKLKVVVSYPIAKCWV*KETLLS Trigger: GGACAAAAGTGTTTCTTTTCACACCCAGCATTTGGC...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACGACACCAGACTCACTTaGTTTTCTCTTCATGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDDTRLT*FSLHVH Trigger: GTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTC...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACTATCATGTGCATATCTaGTGCCCACAGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDYHVHI*CPQRSE Trigger: TTCTGACCTCTGTGGGCACCAGATATGCACATGATA...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAAGATGTGTATGTATATCATGTaGATATCTGGTGCCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CVCQIMNLCMNALPTHKMCMYIM*ISGAHR Trigger: TCTGTGGGCACCAGATATGCACATGATATACATACA...CATCTTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAAGATGACACCTGACTCCAAATaGTTGCAGCTTAAAATAACT | + |
|
Preference number: 2 (lower is better) Translates to: CVCQIMNLCMNALPTHKMTPDSK*LQLKIT Trigger: AGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGT...CATCTTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATACTACACCGCAGTCCATaGTCAGTTCTTCATTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: MVSDLLELKLKVVVSYPILHRSP*SVLHYY Trigger: ATAATAATGAAGAACTGACCATGGACTGCGGTGTAG...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACACACAAGATGGTATCTaGTCTCTTGGAACTGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: SKCLQLKITCLSLLWVRDTQDGI*SLGTEI Trigger: AATTTCAGTTCCAAGAGATCAGATACCATCTTGTGT...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTCTTGGCCTTCTGAGCTaGGGGATCACAGGAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GHTGPEVLGVAALYAGSILGLLS*GITGVL Trigger: GAGCACTCCTGTGATCCCCAAGCTCAGAAGGCCAAG...AATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | ACTTGGAGAACATTCCTAAGGGGGCCACACAGGGCCTaGGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TWRTFLRGPHRA*GVGGCCSLCRV Trigger: GACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCCCCTTAGGAATGTTCTCCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTACAATGTTGCCCAAGTaGGGCTCACATGATCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHTGPEVLGVAALYAGSITMLPK*GSHDPP Trigger: AGGAGGATCATGTGAGCCCAACTTGGGCAACATTGT...AATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCAACCCAGAGCCTCAGAGGTGGACAACCATGGGTTAGTTTGTGGGGGATGTCTAGGCAGTGTCACTaGAGGTCCCATGCTTGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GATQSLRGGQPWVSLWGMSRQCH*RSHAWR Trigger: ACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA...CATCCCCCACAAACTAACCCATGGTTGTCCACCTCTGAGGCTCTGGGTTGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAAGGCCTTGCTCAGAAAGGCTTCCTaGCCAATAGCAAGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGVTGGLQMGSSSLAKALLRKAS*PIASKA Trigger: GGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAG...CAAGGCCTTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | GGACATTTACACCTGGCTTCCTCAGACCTCATGCTCTaGGGCTCCCTCCAGGGTCGCATGTGTCAGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHLHLASSDLML*GSLQGRMCQWL Trigger: AAGCCACTGACACATGCGACCCTGGAGGGAGCCTCAGAGCATGAGGTCTGAGGAAGCCAGGTGTAAATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | GGTGGTTGTGAGCTACCCGATATGGGTGCTCAGAGCTaGACGCAGGTCCTCTGGAAATGCAGCGTAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGCELPDMGAQS*TQVLWKCSVSP Trigger: AGGGCTTACGCTGCATTTCCAGAGGACCTGCGTTCAGCTCTGAGCACCCATATCGGGTAGCTCACAACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR GCA 72 bp | TTCTACCTCCAATCCTTCTCAACTGTCCTCGGCTACTaGGCCTCTGGCTTCCACCAGATTCCGGCAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FYLQSFSTVLGY*ASGFHQIPAVS Trigger: GCTCACTGCCGGAATCTGGTGGAAGCCAGAGGCGCAGTAGCCGAGGACAGTTGAGAAGGATTGGAGGTAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATGTCAGATTATGAATTaGTGCATGAATGCACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GATQGLRCWGLLLSMQGPCQIMN*CMNALP Trigger: GGGCAGTGCATTCATGCACAAATTCATAATCTGACA...TGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR GCA 72 bp | TACACGGACATTTACACCTGGCTTCCTCAGACCTCATaGTCTGAGGCTCCCTCCAGGGTCGCATGTGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YTDIYTWLPQTS*SEAPSRVACVS Trigger: ACTGACACATGCGACCCTGGAGGGAGCCTCAGAGCATGAGGTCTGAGGAAGCCAGGTGTAAATGTCCGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGACGCTGTATGACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCTCGCTGGCAAAGGCCTaGTCTACCCTGATGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: MLTLYDRCHRWPSNGEFLSLAKA*STLMPY Trigger: GTAAGGCATCAGGGTAGACAAGGCCTTTGCCAGCGA...GAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGTCATACAGCGTCAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGCTCCATCATCTTTTCTaGACACCAGACTCACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ATQGLRCWGLLLSMQGPLLHHLF*TPDSLG Trigger: ACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAG...CAATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGCTTGGCCTTCTGAGCTaGGGGATCACAGGAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQLLPCLCAEGIRSCGAQLGLLS*GITGVL Trigger: GAGCACTCCTGTGATCCCCAAGCTCAGAAGGCCAAG...CTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | GGGCCCAGCACCTGGGGAGTTGCAGTAAAGGGACTGTaGGTTCAAGGCCTTCCTAGAAAGGAGGTCATAACA | + |
|
Preference number: 3 (lower is better) Translates to: GPSTWGVAVKGL*VQGLPRKEVIT Trigger: TGTTATGACCTCCTTTCTAGGAAGGCCTTGAACTCACAGTCCCTTTACTGCAACTCCCCAGGTGCTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR GCA 72 bp | CCTCAGAAATCCAGTCCCAGCACCTGGATTTCAAACTaGCTCCCCAAGACCCATGGGTGCCTCAACCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQKSSPSTWISN*LPKTHGCLNLF Trigger: AAAGAGGTTGAGGCACCCATGGGTCTTGGGGAGGCAGTTTGAAATCCAGGTGCTGGGACTGGATTTCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR CCA 72 bp | GGCTTGTCTAGGCAGTGTCACTTGAGGTCCCATGCTTaGCGTGGTTGGATTATTTCTAGGCTGTGTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GLSRQCHLRSHA*RGWIISRLCPR Trigger: CCGAGGACACAGCCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | CAGCACCTGGATTTCAAACTGCCTCCCCAAGACCCATaGGTGCCTCAACCTCTTTCTCAAATGAGAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QHLDFKLPPQDP*VPQPLSQMRGG Trigger: CCCTCCTCTCATTTGAGAAAGAGGTTGAGGCACCCATGGGTCTTGGGGAGGCAGTTTGAAATCCAGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR CCA 72 bp | TTCAAGGTCAGACCTCAGAAATCCAGTCCCAGCACCTaGATTTCAAACTGCCTCCCCAAGACCCATGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FKVRPQKSSPST*ISNCLPKTHGC Trigger: GCACCCATGGGTCTTGGGGAGGCAGTTTGAAATCCAGGTGCTGGGACTGGATTTCTGAGGTCTGACCTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGACTGCTGAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGTCGCTGGCAAAGGCCTaGTCTACCCTGATGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PVTAEPAPSSFLDTRLTWSLAKA*STLMPY Trigger: GTAAGGCATCAGGGTAGACAAGGCCTTTGCCAGCGA...CCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGTCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCTCTAGGCAGTGTCACTaGAGGTCCCATGCTTGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: QTVAKAARGGPLFPLHGFSRQCH*RSHAWR Trigger: ACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | TGTCCACCTGCATTTCCTCCAGATGTTGACGCTGTATaGCAGGTGTCACCGGTGGCCTTCAAATGGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CPPAFPPDVDAV*QVSPVAFKWGV Trigger: AACTCCCCATTTGAAGGCCACCGGTGACACCTGTCATACAGCGTCAACATCTGGAGGAAATGCAGGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR TCA 72 bp | CCTCCAGGGTCGCATGTGTCAGTGGCTTTGTTCCTGTaGCTGCTGAGCCTGCTCCATCATCTTTTCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PPGSHVSVALFL*LLSLLHHLFLT Trigger: TGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGTCACAGGAACAAAGCCACTGACACATGCGACCCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | TGTTCACTCAAAGATCCAGCCCAAGGTTCCCAACTATaGTGCAACCCAGAGCCTCAGAGGTGGACAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: CSLKDPAQGSQL*CNPEPQRWTTM Trigger: CATGGTTGTCCACCTCTGAGGCTCTGGGTTGCACCATAGTTGGGAACCTTGGGCTGGATCTTTGAGTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGCTCAGAAAGGCTTCCTaGCCAATAGCAAGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LQLLPCLCAEGIRSCGAQLRKAS*PIASKA Trigger: GGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAG...CTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGAGACTTAGGACAGGCTaGTCTAGGCAGTGTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLLPCLCAEGIRSCGAQRLRTG*SRQCHL Trigger: CAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCT...CTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | ATCAGGGCTTTAGGATGTAGTTCAATCTGCTTGAAATaGGTGACCCTCCGGCCTTGGCCTTCTGAGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IRALGCSSICLK*VTLRPWPSELG Trigger: CCCAAGCTCAGAAGGCCAAGGCCGGAGGGTCACTCATTTCAAGCAGATTGAACTACATCCTAAAGCCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | TGTAGAGCTGGAGCCATCTTAGAGAGGCTGGGCAGATaGAGCCTATCTCAGAAAGGCTTCCTTGCCAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: CRAGAILERLGR*SLSQKGFLANS Trigger: GCTATTGGCAAGGAAGCCTTTCTGAGATAGGCTTCATCTGCCCAGCCTCTCTAAGATGGCTCCAGCTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | CCCAAGACCCATGGGTGCCTCAACCTCTTTCTCAAATaGGAGGAGGGTCTGTGCTTTCTACCTCCAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PKTHGCLNLFLK*EEGLCFLPPIL Trigger: AAGGATTGGAGGTAGAAAGCACAGACCCTCCTCTCATTTGAGAAAGAGGTTGAGGCACCCATGGGTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR GCA 72 bp | AGCATGCTAGGCAACTGCTCTGCCATAGAGCTACACTaGAGTCTACACCGCAGTCCATGGTCAGTTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SMLGNCSAIELH*SLHRSPWSVLH Trigger: ATGAAGAACTGACCATGGACTGCGGTGTAGACTGCAGTGTAGCTCTATGGCAGAGCAGTTGCCTAGCATGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGACAGAACCCAGGGCCTTCAGCATGCTAGGCAACTGCTCTGCCATAGAGCAGGGTGACAAAATCTaGTTTAGTTGGCTTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VETEPRAFSMLGNCSAIEQGDKI*FSWLFC Trigger: ACAGAAAAGCCAACTAAACAAGATTTTGTCACCCTG...CTCTATGGCAGAGCAGTTGCCTAGCATGCTGAAGGCCCTGGGTTCTGTCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR TCA 72 bp | TTTCTCTTCATGTCCACCTGCATTTCCTCCAGATGTTaGCGCTGTATGACAGGTGTCACCGGTGGCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLFMSTCISSRC*RCMTGVTGGLQ Trigger: TTGAAGGCCACCGGTGACACCTGTCATACAGCGTCAACATCTGGAGGAAATGCAGGTGGACATGAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | CTTCTGAGCTTGGGGATCACAGGAGTGCTCTGGAAGTaGCAGGCAAATTTCCACTCTCTGTCACCATTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LLSLGITGVLWK*QANFHSLSPFT Trigger: GGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACTTCCAGAGCACTCCTGTGATCCCCAAGCTCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR GCA 72 bp | TTTATTCTGTGTTGTGTACATCATAGGCTGCTATTGTaGTGGGGCTCCTGTGTCGGTGGTAAGGACCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FILCCVHHRLLL*WGSCVGGKDPS Trigger: ACTGGGGTCCTTACCACCGACACAGGAGCCCCAGCACAATAGCAGCCTATGATGTACACAACACAGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| 3UTR CCA 72 bp | TTAAGATTCCAGGCATGTGCTACCATGTCTGCTTTATaGGGCGCTGGTGAAGGAACCCACACCTTTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRFQACATMSAL*GAGEGTHTFVL Trigger: AAGCACAAAGGTGTGGGTTCCTTCACCAGCGCCCCATAAAGCAGACATGGTAGCACATGCCTGGAATCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGAACATTCAACATTGTTCGCTGGCAAAGGCCTaGTCTACCCTGATGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CLCAEGIRSCGAQNIQHCSLAKA*STLMPY Trigger: GTAAGGCATCAGGGTAGACAAGGCCTTTGCCAGCGA...ACAATGTTGAATGTTCTGTGCCCCACATGATCTGATCCCTTCAGCACATAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | CTGGACTTGAACATGCCATGTAATGACAGCTTCCTCTaGACTCACGCTCCTCCTGCCTCAGGTGTTAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LDLNMPCNDSFL*THAPPASGVKI Trigger: AATCTTAACACCTGAGGCAGGAGGAGCGTGAGTTCAGAGGAAGCTGTCATTACATGGCATGTTCAAGTCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | AGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTTaGGGTCCCATGCTTGGCGTGGTTGGATTATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RDLGQACLGSVT*GPMLGVVGLFL Trigger: TAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | TCGCAGCAGTTTCTGGTGTCTGCCAAATGCTGGGTGTaGAAAGAAACACTTTTGTCCCACTCACGGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQQFLVSAKCWV*KETLLSHSRSF Trigger: AAAGGACCGTGAGTGGGACAAAAGTGTTTCTTTTCACACCCAGCATTTGGCAGACACCAGAAACTGCTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR TCA 72 bp | TGGTGGTGGTGGTCGCCATCTCTGACCCATCTTTGGTaGGACATCAAACCACAGGGTGACAAAATCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: WWWWSPSLTHLW*DIKPQGDKILF Trigger: AAACAAGATTTTGTCACCCTGTGGTTTGATGTCTCACCAAAGATGGGTCAGAGATGGCGACCACCACCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR GCA 72 bp | AGCTCTCATTTATTCTGTGTTGTGTACATCATAGGCTaGTATTGTGCTGGGGCTCCTGTGTCGGTGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSHLFCVVYIIG*YCAGAPVSVVR Trigger: CCTTACCACCGACACAGGAGCCCCAGCACAATAGCAGCCTATGATGTACACAACACAGAATAAATGAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| 3UTR CCA 72 bp | CACACCTCTTCTCCCTGTTCCTTTAACCCTAACATCTaGCACGCAGGTCTGTTCCTCACCTCTCTAATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTSSPCSFNPNI*HAGLFLTSLIC Trigger: ACAAATTAGAGAGGTGAGGAACAGACCTGCGTGCCAGATGTTAGGGTTAAAGGAACAGGGAGAAGAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCTGTCAGATTATGAATTaGTGCATGAATGCACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QTVAKAARGGPLFPLHGFCQIMN*CMNALP Trigger: GGGCAGTGCATTCATGCACAAATTCATAATCTGACA...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTGACACCAGACTCACTTGGTTTTCTCTTCATGTCCACCTGCATTTCCTCCTCAGAAAGGCTTCCTaGCCAATAGCAAGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FLDTRLTWFSLHVHLHFLLRKAS*PIASKA Trigger: GGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAG...GAGGAAATGCAGGTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACTCGCTGGCAAAGGCCTaGTCTACCCTGATGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SKCLQLKITCLSLLWVRDSLAKA*STLMPY Trigger: GTAAGGCATCAGGGTAGACAAGGCCTTTGCCAGCGA...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | CCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTaGTTTTCTCTTCATGTCCACCTGCATTTCCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAPSSFLDTRLT*FSLHVHLHFLQ Trigger: CTGGAGGAAATGCAGGTGGACATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | CACAGTGTCGGAAGGCTCTGTACGTTTCCTTCTGTGTaGCCATACCAAGCTACTATAAAAGGTAGAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSVGRLCTFPSV*PYQATIKGRNR Trigger: CCTGTTTCTACCTTTTATAGTAGCTTGGTATGGCCACACAGAAGGAAACGTACAGAGCCTTCCGACACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTCTCCCTAGGGCTTaGAAAACACAGGGTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SDRQISTLCHHLPLDLNMTLPRA*KTQGLT Trigger: TGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAGAGT...CATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | CAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTaGTCTGAATATGACTGCTGTGTTACACCTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QANFHSLSPFTP*SEYDCCVTPDS Trigger: GGAGTCAGGTGTAACACAGCAGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR TCA 72 bp | GTGCATGAATGCACTGCCCACACACAAGATGGTATCTaGTCTCTTGGAACTGAAATTAAAGGTGGTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VHECTAHTQDGI*SLGTEIKGGCE Trigger: CTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCATCTTGTGTGTGGGCAGTGCATTCATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | TGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATaGGTCAGAGACTTAGGACAGGCTTGTCTAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLQLKITCLSLL*VRDLGQACLGS Trigger: ACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGTTACACCTGACTCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGCAACCATGGGTTAGTTaGTGGGGGATGTATGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: CCVTPDSKCLQLKITCLSQPWVS*WGMYVC Trigger: ACATACATACATCCCCCACAAACTAACCCATGGTTG...CGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | GCCATAGAGCTACACTGCAGTCTACACCGCAGTCCATaGTCAGTTCTTCATTATTATCATCTACTATCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AIELHCSLHRSP*SVLHYYHLLSK Trigger: TTTGGATAGTAGATGATAATAATGAAGAACTGACCATGGACTGCGGTGTAGACTGCAGTGTAGCTCTATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CCA 72 bp | ATGTATGTATGTATGTATGTATATCATGTGCATATCTaGTGCCCACAGAGGTCAGAAGATGGCACTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: MYVCMYVYHVHI*CPQRSEDGTDS Trigger: GGAATCAGTGCCATCTTCTGACCTCTGTGGGCACCAGATATGCACATGATATACATACATACATACATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TATATGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAACCTCACCTCTCTAATTaGTCACTTGGAGAACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: YMCVSDYEFVHECTAHTQPHLSN*SLGEHS Trigger: GGAATGTTCTCCAAGTGACAAATTAGAGAGGTGAGG...TTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR-3UTR CAA 90 bp | TATATGTGTGTGTCAGATTATGAATTTGTGCATGAATGCACTGCCCACACACAACCTGACTCCAAATGCTaGCAGCTTAAAATAACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YMCVSDYEFVHECTAHTQPDSKC*QLKITC Trigger: ACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGG...TTGTGTGTGGGCAGTGCATTCATGCACAAATTCATAATCTGACACACACATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR GCA 72 bp | TCTGAATATGACTGCTGTGTTACACCTGACTCCAAATaGTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SEYDCCVTPDSK*LQLKITCLSLL Trigger: TAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCAGTCATATTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCAAGGTCCCATCCCTGCTaGCTTGCCGCGGCCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GATQGLRCWGLLLSMQGPRSHPC*LAAAGL Trigger: GAGACCGGCCGCGGCAAGGCAGCAGGGATGGGACCT...TGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 |
||
| CDS-3UTR GCA 90 bp | GCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTGAGGTCCCATCCCTGCTaGCTTGCCGCGGCCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATQGLRCWGLLLSMQGPLRSHPC*LAAAGL Trigger: GAGACCGGCCGCGGCAAGGCAGCAGGGATGGGACCT...CAATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 |
||
| CDS-3UTR GCA 90 bp | CGGCCTTGGCCTTCTGAGCTTGGGGATCACAGGAGTGCTCTGGAAGTGACAGGCAAGAGGTCCCATCCCTaGTGCCTTGCCGCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPWPSELGDHRSALEVTGKRSHP*CLAAAG Trigger: ACCGGCCGCGGCAAGGCAGCAGGGATGGGACCTCTT...GCCTGTCACTTCCAGAGCACTCCTGTGATCCCCAAGCTCAGAAGGCCAAGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGTCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTAGGTCCCATCCCTGCTaGCTTGCCGCGGCCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCVGGKDPSRHAPEWFSVRSHPC*LAAAGL Trigger: GAGACCGGCCGCGGCAAGGCAGCAGGGATGGGACCT...AACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGACACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCCTGTGTCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTAGGCTTTCGGCAGGCTaGGACTCCTTGTCAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAPVSVVRTPVGMLPNGSRLSAG*DSLSDC Trigger: GCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCT...AGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGACACAGGAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTCATCGTTGTCGGGAAGAGGTCCCATCCCTaGTGCCTTGCCGCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTPVGMLPNGSLFIVVGKRSHP*CLAAAG Trigger: ACCGGCCGCGGCAAGGCAGCAGGGATGGGACCTCTT...CCCGACAACGATGAACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAAGGCCTTGAGGCTTTCGGCAGGCTaGGACTCCTTGTCAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGVTGGLQMGSSSLAKALRLSAG*DSLSDC Trigger: GCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCT...CAAGGCCTTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCCTGTGTCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCGGGTGATGATGATCTaGGGGATGACACTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAPVSVVRTPVGMLPNGSRVMMI*GMTLLF Trigger: GAAGAGAAGTGTCATCCCGCAGATCATCATCACCCG...AGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGACACAGGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR GCA 90 bp | CGGCCTTGGCCTTCTGAGCTTGGGGATCACAGGAGTGCTCTGGAAGTGACAGGCGACTCCTTGTCAGACTaGTTGGCCTCCTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPWPSELGDHRSALEVTGDSLSD*LASFSI Trigger: AATGGAGAAGGAGGCCAAGCAGTCTGACAAGGAGTC...GCCTGTCACTTCCAGAGCACTCCTGTGATCCCCAAGCTCAGAAGGCCAAGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212161.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGAAGAGGTCCCATCCCTaGTGCCTTGCCGCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRQCHLRSHAWRGWIISRKRSHP*CLAAAG Trigger: ACCGGCCGCGGCAAGGCAGCAGGGATGGGACCTCTT...CCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGCAGTGTCACTTGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCTAGGGGTGGTCGCCATCTCTaGCCCATCTCCCGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRQCHLRSHAWRGWIISRGGRHL*PISRVI Trigger: GATGACCCGGGAGATGGGTCAGAGATGGCGACCACC...CCTAGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212161.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAAGGCCTTGTGACTCCTTGTCAGACTaGTTGGCCTCCTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QVSPVAFKWGVPRWQRPCDSLSD*LASFSI Trigger: AATGGAGAAGGAGGCCAAGCAGTCTGACAAGGAGTC...ACAAGGCCTTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTCTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGGCACAGAGTCCTCGATaGCGATGCCAGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLQLLPCLCAEGIRSCGAQSPR*RCQAWW Trigger: CCACCATGCCTGGCATCGGCATCGAGGACTCTGTGC...CCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAGAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTTGCAAAAGCAGCAAGAGGTGGCCCCCTGTTCCCTTTACACGGTTTCTGCCGATGCCAGGCATaGTGGTGGTGGTCGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAKAARGGPLFPLHGFCRCQA*WWWSPS Trigger: AGATGGCGACCACCACCACCATGCCTGGCATCGGCA...GAAACCGTGTAAAGGGAACAGGGGGCCACCTCTTGCTGCTTTTGCAACTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGACTGCTGAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGTGCCGATGCCAGGCATaGTGGTGGTGGTCGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTAEPAPSSFLDTRLTWCRCQA*WWWSPS Trigger: AGATGGCGACCACCACCACCATGCCTGGCATCGGCA...CCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGTCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212892.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGCTGCTATTGTGCTGGGGCTCCTGTGTCGGTGGTAAGGACCCCAGTCGGCACTTCTCTTCTTGCTTaGCCTTTGCTTTGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGCYCAGAPVSVVRTPVGTSLLA*PLLCLR Trigger: CCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGT...GCCGACTGGGGTCCTTACCACCGACACAGGAGCCCCAGCACAATAGCAGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR TCA 90 bp | TACCCTGATGCCTTACAAACTTGTAGAGCTGGAGCCATCTTAGAGAGGCTGGGCTGGTCTGTGTGCCTGTaGGGCTGCAGCCTTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YPDALQTCRAGAILERLGWSVCL*GCSLPD Trigger: ATCTGGAAGGCTGCAGCCTCACAGGCACACAGACCA...GCCCAGCCTCTCTAAGATGGCTCCAGCTCTACAAGTTTGTAAGGCATCAGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212892.2 |
||
| 3UTR CAA 72 bp | AGAAACACTTTTGTCCCACTCACGGTCCTTTCTACCTaGAGACGCCCTCCCATCTTTGTGGCCAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNTFVPLTVLST*RRPPIFVARLR Trigger: CCTCAGCCTGGCCACAAAGATGGGAGGGCGTCTCAAGGTAGAAAGGACCGTGAGTGGGACAAAAGTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212760.2 |
||
| 3UTR CAA 72 bp | CTCCCTAGGGCTTTGAAAACACAGGGTCTCACAATGTaGCCCAAGTTGGGCTCACATGATCCTCCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPRALKTQGLTM*PKLGSHDPPAS Trigger: TGAGGCAGGAGGATCATGTGAGCCCAACTTGGGCAACATTGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGAAGTGACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCAGGCTTTCGGCAGGCTaGGACTCCTTGTCAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEVTGKFPLSVTIYPLIRLSAG*DSLSDC Trigger: GCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCT...GATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTCACTTCCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGTTTTCTCTTCATGTCCGCACAGAGTCCTCGATaGCGATGCCAGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHHLFLTPDSLGFLFMSAQSPR*RCQAWW Trigger: CCACCATGCCTGGCATCGGCATCGAGGACTCTGTGC...GGACATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212892.2 |
||
| 3UTR CAA 72 bp | TCTGTCGTTGTTATGGGTCAGAGACTTAGGACAGGCTaGTCTAGGCAGTGTCACTTGAGGTCCCATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVVMGQRLRTG*SRQCHLRSHAW Trigger: CCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTGACCCATAACAACGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGTTTTCTCTTCATTGGTCTGTGTGCCTGTaGGGCTGCAGCCTTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPAPSSFLDTRLTWFSLHWSVCL*GCSLPD Trigger: ATCTGGAAGGCTGCAGCCTCACAGGCACACAGACCA...ATGAAGAGAAAACCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212892.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGTCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTTTCTTGCTTGACCTTTaGTTTGTCTCAGGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCVGGKDPSRHAPEWFSVFLLDL*FVSGLS Trigger: AGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAA...AACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGACACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTGCACAGAGTCCTCGATaGCGATGCCAGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRQISTLCHHLPLDLNMTAQSPR*RCQAWW Trigger: CCACCATGCCTGGCATCGGCATCGAGGACTCTGTGC...AGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTCCAACTCCTTCCATGTCTATGTGCTGAAGGGATCAGATCATGTGGGCCTCTTTCTTCTCTCTaGGTTTGCTTTTCGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPLQLLPCLCAEGIRSCGPLSSL*VCFSTG Trigger: GCCAGTCGAAAAGCAAACCCAGAGAGAAGAAAGAGG...CCCACATGATCTGATCCCTTCAGCACATAGACATGGAAGGAGTTGGAGAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212161.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGACTGCTGAGCCTGCTCCATCATCTTTTCTTGACACCAGACTCACTTGGCCTCTTTCTTCTCTCTaGGTTTGCTTTTCGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTAEPAPSSFLDTRLTWPLSSL*VCFSTG Trigger: GCCAGTCGAAAAGCAAACCCAGAGAGAAGAAAGAGG...CCAAGTGAGTCTGGTGTCAAGAAAAGATGATGGAGCAGGCTCAGCAGTCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 |
||
| 3UTR CAA 72 bp | TTTTCTCTTCATGTCCACCTGCATTTCCTCCAGATGTaGACGCTGTATGACAGGTGTCACCGGTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLHVHLHFLQM*TLYDRCHRWPS Trigger: TGAAGGCCACCGGTGACACCTGTCATACAGCGTCAACATCTGGAGGAAATGCAGGTGGACATGAAGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| 3UTR CAA 72 bp | CAGAGACTTAGGACAGGCTTGTCTAGGCAGTGTCACTaGAGGTCCCATGCTTGGCGTGGTTGGATTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRTGLSRQCH*RSHAWRGWIIS Trigger: AGAAATAATCCAACCACGCCAAGCATGGGACCTCAAGTGACACTGCCTAGACAAGCCTGTCCTAAGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAATGCTTGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGGGTCAGAGACTGCCGATGCCAGGCATaGTGGTGGTGGTCGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKCLQLKITCLSLLWVRDCRCQA*WWWSPS Trigger: AGATGGCGACCACCACCACCATGCCTGGCATCGGCA...GTCTCTGACCCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
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| CDS-3UTR TCA 90 bp | ATGGTATCTGATCTCTTGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCGATATGGTCTGTGTGCCTGTaGGGCTGCAGCCTTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: MVSDLLELKLKVVVSYPIWSVCL*GCSLPD Trigger: ATCTGGAAGGCTGCAGCCTCACAGGCACACAGACCA...TATCGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
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| 3UTR CAA 72 bp | TGTGCTTCTTGTATGGTAGACACTCTCCCTAGGGCTTaGAAAACACAGGGTCTCACAATGTTGCCCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CASCMVDTLPRA*KTQGLTMLPKL Trigger: CAACTTGGGCAACATTGTGAGACCCTGTGTTTTCAAAGCCCTAGGGAGAGTGTCTACCATACAAGAAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CAA 72 bp | ACCCAGAGCCTCAGAGGTGGACAACCATGGGTTAGTTaGTGGGGGATGTATGTATGTATGTATATCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: TQSLRGGQPWVS*WGMYVCMYITY Trigger: ATACGTGATATACATACATACATACATCCCCCACAAACTAACCCATGGTTGTCCACCTCTGAGGCTCTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CAA 72 bp | AATGCACTGCCCACACACAAGATGGTATCTGATCTCTaGGAACTGAAATTAAAGGTGGTTGTGAGCTACCCG | + |
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Preference number: 4 (lower is better) Translates to: NALPTHKMVSDL*ELKLKVVVSYP Trigger: CGGGTAGCTCACAACCACCTTTAATTTCAGTTCCAAGAGATCAGATACCATCTTGTGTGTGGGCAGTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| 3UTR CAA 72 bp | GAATATGACTGCTGTGTTACACCTGACTCCAAATGCTaGCAGCTTAAAATAACTTGTCTGTCGTTGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: EYDCCVTPDSKC*QLKITCLSLLW Trigger: CCATAACAACGACAGACAAGTTATTTTAAGCTGCAAGCATTTGGAGTCAGGTGTAACACAGCAGTCATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212760.2 ENSMUST00000212892.2 |
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| CDS GCA 90 bp | TGCTTTGTCTCAGGTTTGTCTTCAGACGAAGACGACGGCCTTGAGTaGTTGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGACTCC | + |
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Preference number: 5 (lower is better) Translates to: CFVSGLSSDEDDGLE*LDVANNRLSAGCDS Trigger: GGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGACAAACCTGAGACAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS-3UTR CAA 90 bp | GGCCACACAGGGCCTGAGGTGTTGGGGGTTGCTGCTCTCTATGCAGGGTCCATTAAGACATTCCTGAGGTaGAAAGCGACACAATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GHTGPEVLGVAALYAGSIKTFLR*KATQWS Trigger: GCTCCATTGTGTCGCTTTCAACCTCAGGAATGTCTT...AATGGACCCTGCATAGAGAGCAGCAACCCCCAACACCTCAGGCCCTGTGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
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| CDS TCA 90 bp | CCTTTGCTTTGTCTCAGGTTTGTCTTCAGACGAAGACGACGGCCTTaGGTGCTTGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: PLLCLRFVFRRRRRP*VLGCREQQAFGRLR Trigger: TCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGACAAACCTGAGACAAAGCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS-3UTR CAA 90 bp | ACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAAGGCCTTGAAGACATTCCTGAGGTaGAAAGCGACACAATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: TGVTGGLQMGSSSLAKALKTFLR*KATQWS Trigger: GCTCCATTGTGTCGCTTTCAACCTCAGGAATGTCTT...CAAGGCCTTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212346.2 ENSMUST00000212892.2 |
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| CDS-3UTR CAA 90 bp | CTGTATGACAGGTGTCACCGGTGGCCTTCAAATGGGGAGTTCCTCGCTGGCAAACTCAGAAAGGCTTCCTaGCCAATAGCAAGCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LYDRCHRWPSNGEFLAGKLRKAS*PIASKA Trigger: GGCCTTGCTTGCTATTGGCAAGGAAGCCTTTCTGAG...TTTGCCAGCGAGGAACTCCCCATTTGAAGGCCACCGGTGACACCTGTCATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212161.2 |
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| CDS-3UTR CAA 90 bp | TCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTCATCGTTTGCTTGACCTTTGCTTaGTCTCAGGTTTGTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SVVRTPVGMLPNGSLFIVCLTFA*SQVCLP Trigger: CGGGAGACAAACCTGAGACAAAGCAAAGGTCAAGCA...AACGATGAACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS-3UTR CAA 90 bp | GTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTCATCGTTGTCCACTTCTCTTCTTGCTaGACCTTTGCTTTGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VVRTPVGMLPNGSLFIVVHFSSC*TFALSQ Trigger: CTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTG...GACAACGATGAACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS-3UTR CAA 90 bp | TCGGTGGTAAGGACCCCAGTCGGCATGCTCCCGAATGGTTCTCTGTTCATCGTTATGACACTTCTCTTCTaGCTTGACCTTTGCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SVVRTPVGMLPNGSLFIVMTLLF*LDLCFV Trigger: GACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCAT...AACGATGAACAGAGAACCATTCGGGAGCATGCCGACTGGGGTCCTTACCACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS GCA 90 bp | GTGATGATGATCTGCGGGATGACACTTCTCTTCTTGCTTGACCTTTaGTTTGTCTCAGGTTTGTCTTCAGACGAAGACGACGGCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VMMICGMTLLFLLDL*FVSGLSSDEDDGLE Trigger: CTCAAGGCCGTCGTCTTCGTCTGAAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS GCA 90 bp | GTGATGATGATCTGCGGGATGACACTTCTCTTCTTGCTTGACCTTTaGTTTGTCTCAGGTTTGTCTCCCGGGTCATCATCCTTAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: VMMICGMTLLFLLDL*FVSGLSPGSSSLER Trigger: TCTTTCTAAGGATGATGACCCGGGAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS-3UTR CAA 90 bp | GACAGGCAAATTTCCACTCTCTGTCACCATTTACCCCTTGATCTGAATATGACTAAGACATTCCTGAGGTaGAAAGCGACACAATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DRQISTLCHHLPLDLNMTKTFLR*KATQWS Trigger: GCTCCATTGTGTCGCTTTCAACCTCAGGAATGTCTT...AGTCATATTCAGATCAAGGGGTAAATGGTGACAGAGAGTGGAAATTTGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212161.2 ENSMUST00000212892.2 |
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| CDS CCA 72 bp | AATGGAGCACAGAGTCCTCGATGCCGATGCCAGGCATaGTGGTGGTGGTCGCCATCTCTGACCCATCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: NGAQSPRCRCQA*WWWSPSLTHLP Trigger: CGGGAGATGGGTCAGAGATGGCGACCACCACCACCATGCCTGGCATCGGCATCGAGGACTCTGTGCTCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212161.2 |
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| CDS CCA 72 bp | GCACAGAGTCCTCGATGCCGATGCCAGGCATGGTGGTaGTGGTCGCCATCTCTGACCCATCTTCAGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: AQSPRCRCQAWW*WSPSLTHLQTK Trigger: CTTCGTCTGAAGATGGGTCAGAGATGGCGACCACCACCACCATGCCTGGCATCGGCATCGAGGACTCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212346.2 ENSMUST00000212892.2 |
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| CDS CAA 90 bp | CTCTGGATCTCCCTACCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LWISLPSDEDDGLEC*DVANNRLSAGCDSL Trigger: CAAGGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGGTAGGGAGATCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212523.2 ENSMUST00000212760.2 |
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| CDS CAA 90 bp | GCCATCTCTGACCCATCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AISDPSSDEDDGLEC*DVANNRLSAGCDSL Trigger: CAAGGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGATGGGTCAGAGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212346.2 ENSMUST00000212892.2 |
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| CDS CAA 72 bp | TCCCTACCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLPSDEDDGLEC*DVANNRLSAGC Trigger: GCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGGTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000212161.2 ENSMUST00000212523.2 ENSMUST00000212760.2 |
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| CDS CAA 72 bp | GACCCATCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: DPSSDEDDGLEC*DVANNRLSAGC Trigger: GCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGATGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212346.2 ENSMUST00000212892.2 |
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| CDS CAA 72 bp | GGTTTGTCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLSSDEDDGLEC*DVANNRLSAGC Trigger: GCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGACAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 90 bp | TTTGTCTCAGGTTTGTCTTCAGACGAAGACGACGGCCTTGAGTGCTaGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FVSGLSSDEDDGLEC*DVANNRLSAGCDSL Trigger: CAAGGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGACAAACCTGAGACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 90 bp | ACCTTTGCTTTGTCTCAGGTTTGTCTTCAGACGAAGACGACGGCCTaGAGTGCTTGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: TFALSQVCLQTKTTA*SAWMSRTTGFRQAA Trigger: CGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCACTCAAGGCCGTCGTCTTCGTCTGAAGACAAACCTGAGACAAAGCAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 90 bp | TGCTTGGATGTCGCGAACAACAGGCTTTCGGCAGGCTGCGACTCCTaGTCAGACTGCTTGGCCTCCTTCTCCATTACTTTCTCCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: CLDVANNRLSAGCDS*SDCLASFSITFSLD Trigger: GTCTAAGGAGAAAGTAATGGAGAAGGAGGCCAAGCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGCGACATCCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060133.8 ENSMUST00000212161.2 ENSMUST00000212346.2 |
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| CDS GCA 72 bp | ATTAGCGTCTCGTTGGAGGCCCGGGTGATGATGATCTaGGGGATGACACTTCTCTTCTTGCTTGACCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ISVSLEARVMMI*GMTLLFLLDLC Trigger: GCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCACCCGGGCCTCCAACGAGACGCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 90 bp | TTGGAGGCCCGGGTGATGATGATCTGCGGGATGACACTTCTCTTCTaGCTTGACCTTTGCTTTGTCTCAGGTTTGTCTCCCGGGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LEARVMMICGMTLLF*LDLCFVSGLSPGSS Trigger: TGATGACCCGGGAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCACCCGGGCCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS CAA 72 bp | AGGCTTTCGGCAGGCTGCGACTCCTTGTCAGACTGCTaGGCCTCCTTCTCCATTACTTTCTCCTTAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: RLSAGCDSLSDC*ASFSITFSLDF Trigger: AAAGTCTAAGGAGAAAGTAATGGAGAAGGAGGCCAAGCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060133.8 ENSMUST00000212161.2 ENSMUST00000212346.2 |
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| CDS CAA 90 bp | TTGGAGGCCCGGGTGATGATGATCTGCGGGATGACACTTCTCTTCTaGCTTGACCTTTGCTTTGTCTCAGGTTTGTCTTCAGACGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LEARVMMICGMTLLF*LDLCFVSGLSSDED Trigger: GTCTTCGTCTGAAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCACCCGGGCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 72 bp | CGGGTGATGATGATCTGCGGGATGACACTTCTCTTCTaGCTTGACCTTTGCTTTGTCTCAGGTTTGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RVMMICGMTLLF*LDLCFVSGLSP Trigger: GGGAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212523.2 |
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| CDS CAA 90 bp | GCGAACAACAGGCTTTCGGCAGGCTGCGACTCCTTGTCAGACTGCTaGGCCTCCTTCTCCATTACTTTCTCCTTAGACTTTGTAACTAAA | + |
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Preference number: 6 (lower is better) Translates to: ANNRLSAGCDSLSDC*ASFSITFSLDFVTK Trigger: TTTAGTTACAAAGTCTAAGGAGAAAGTAATGGAGAAGGAGGCCAAGCAGTCTGACAAGGAGTCGCAGCCTGCCGAAAGCCTGTTGTTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060133.8 ENSMUST00000212161.2 ENSMUST00000212346.2 |
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| CDS GCA 72 bp | ATCTGCGGGATGACACTTCTCTTCTTGCTTGACCTTTaGTTTGTCTCAGGTTTGTCTTCAGACGAAGACGAC | + |
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Preference number: 6 (lower is better) Translates to: ICGMTLLFLLDL*FVSGLSSDEDD Trigger: GTCGTCTTCGTCTGAAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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| CDS CAA 72 bp | CGGGTGATGATGATCTGCGGGATGACACTTCTCTTCTaGCTTGACCTTTGCTTTGTCTCAGGTTTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RVMMICGMTLLF*LDLCFVSGLSS Trigger: TGAAGACAAACCTGAGACAAAGCAAAGGTCAAGCAAGAAGAGAAGTGTCATCCCGCAGATCATCATCACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060133.8 ENSMUST00000212637.2 |
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