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Pregenerated sensors for SPATA32 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044787

Ensembl transcript IDs: ENSMUST00000103076.2

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGGCCATGTTGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAGTTaGTCAGATCGGCTAGGCCAATGGCTGTGGGCGTGGTGGGGCGAG +
Preference number: 5 (lower is better)
Translates to: RPCCWRRLQPETMRS*SDRLGQWLWAWWGE
Trigger: CTCGCCCCACCACGCCCACAGCCATTGGCCTAGCCGATCTGATCAACTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCAACATGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS GCA 90 bp GACGCCTGGATGAGCTTGTTTGACCAGAAAAGATGTTTAGAGGTCTaGACAGGGATGGAGCGATACCGGCCGCCCATCTCCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: DAWMSLFDQKRCLEV*TGMERYRPPISSSS
Trigger: TGAAGAGGAGGAGATGGGCGGCCGGTATCGCTCCATCCCTGTGCAGACCTCTAAACATCTTTTCTGGTCAAACAAGCTCATCCAGGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 90 bp CCAAGATTTGTGAGCCATGCTTTTGGGGGACTCATCTTGCTTCTCTaGGGATATCTGGGTGATCTGGGTAGCCTGGGCAAACTTGATGGC +
Preference number: 5 (lower is better)
Translates to: PRFVSHAFGGLILLL*GYLGDLGSLGKLDG
Trigger: GCCATCAAGTTTGCCCAGGCTACCCAGATCACCCAGATATCCTCAGAGAAGCAAGATGAGTCCCCCAAAAGCATGGCTCACAAATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 90 bp AAGGCCATGTTGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAGTaGATCAGATCGGCTAGGCCAATGGCTGTGGGCGTGGTGGGGCGA +
Preference number: 6 (lower is better)
Translates to: KAMLLEEATARDDAK*IRSARPMAVGVVGR
Trigger: TCGCCCCACCACGCCCACAGCCATTGGCCTAGCCGATCTGATCAACTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCAACATGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 72 bp TGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAGTTaGTCAGATCGGCTAGGCCAATGGCTGTGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: CWRRLQPETMRS*SDRLGQWLWAW
Trigger: CCACGCCCACAGCCATTGGCCTAGCCGATCTGATCAACTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp TTGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAGTaGATCAGATCGGCTAGGCCAATGGCTGTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: LLEEATARDDAK*IRSARPMAVGV
Trigger: CACGCCCACAGCCATTGGCCTAGCCGATCTGATCAACTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 90 bp TCCATCTCCTCCAGCTGTGGTACTGGACCTAGCTCTGGGTCCACTTaGGGTGGGGGCTCTGTCCTTGGTAACTCTGCTTCTACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SISSSCGTGPSSGST*GGGSVLGNSASTSV
Trigger: TACAGAGGTAGAAGCAGAGTTACCAAGGACAGAGCCCCCACCCAAAGTGGACCCAGAGCTAGGTCCAGTACCACAGCTGGAGGAGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CCA 72 bp GATTCCCTTTCTTGGTTCCCGGCACCGAGTCCTCTTTaGCTTCCTGAAGCTGAGGGGATGCGATTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: DSLSWFPAPSPL*LPEAEGMRLVS
Trigger: AGACACCAATCGCATCCCCTCAGCTTCAGGAAGCCAAAGAGGACTCGGTGCCGGGAACCAAGAAAGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CCA 72 bp GACTCATCTTGCTTCTCTGAGGATATCTGGGTGATCTaGGTAGCCTGGGCAAACTTGATGGCCTGGACAGGC +
Preference number: 6 (lower is better)
Translates to: DSSCFSEDIWVI*VAWANLMAWTG
Trigger: GCCTGTCCAGGCCATCAAGTTTGCCCAGGCTACCCAGATCACCCAGATATCCTCAGAGAAGCAAGATGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 72 bp TGGGATATGGAGATGGACTTCTCCTGGGGGCTCCTGTaGTGCTTTTCTAAGGCCTTCTGTAGACTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: WDMEMDFSWGLL*CFSKAFCRLCS
Trigger: GGAGCACAGTCTACAGAAGGCCTTAGAAAAGCATCACAGGAGCCCCCAGGAGAAGTCCATCTCCATATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 72 bp GTGAGCCATGCTTTTGGGGGACTCATCTTGCTTCTCTaGGGATATCTGGGTGATCTGGGTAGCCTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: VSHAFGGLILLL*GYLGDLGSLGK
Trigger: TTTGCCCAGGCTACCCAGATCACCCAGATATCCTCAGAGAAGCAAGATGAGTCCCCCAAAAGCATGGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CCA 72 bp ATGGTGGTTGGGTACATTCTGTGTAGACCTGGGATATaGAGATGGACTTCTCCTGGGGGCTCCTGTGATGCT +
Preference number: 6 (lower is better)
Translates to: MVVGYILCRPGI*RWTSPGGSCDA
Trigger: AGCATCACAGGAGCCCCCAGGAGAAGTCCATCTCCATATCCCAGGTCTACACAGAATGTACCCAACCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CCA 72 bp CTTTTGGGGGACTCATCTTGCTTCTCTGAGGATATCTaGGTGATCTGGGTAGCCTGGGCAAACTTGATGGCC +
Preference number: 6 (lower is better)
Translates to: LLGDSSCFSEDI*VIWVAWANLMA
Trigger: GGCCATCAAGTTTGCCCAGGCTACCCAGATCACCCAGATATCCTCAGAGAAGCAAGATGAGTCCCCCAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp AGTCCTCTTTGGCTTCCTGAAGCTGAGGGGATGCGATaGGTGTCTGGACAAACTTCACTTCCCCTTGGATGG +
Preference number: 6 (lower is better)
Translates to: SPLWLPEAEGMR*VSGQTSLPLGW
Trigger: CCATCCAAGGGGAAGTGAAGTTTGTCCAGACACCAATCGCATCCCCTCAGCTTCAGGAAGCCAAAGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 90 bp AAGCTGAGGGGATGCGATTGGTGTCTGGACAAACTTCACTTCCCCTaGGATGGTAGCTGTCTTGAGCCCTGCCTGGTTAATATCCAGGTA +
Preference number: 6 (lower is better)
Translates to: KLRGCDWCLDKLHFP*DGSCLEPCLVNIQV
Trigger: TACCTGGATATTAACCAGGCAGGGCTCAAGACAGCTACCATCCAAGGGGAAGTGAAGTTTGTCCAGACACCAATCGCATCCCCTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 72 bp ACCTCTGTATCTTCATCCTCGTTTTCTTCATGGGTGTaGTGGTGGTGGTGGCGGTGGTGGTCACTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: TSVSSSSFSSWV*WWWWRWWSLCL
Trigger: AAGACAGAGTGACCACCACCGCCACCACCACCATCACACCCATGAAGAAAACGAGGATGAAGATACAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp CCTTTGATCATGTTCTCTAAGTTAGGCAAGGCCATGTaGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAG +
Preference number: 6 (lower is better)
Translates to: PLIMFSKLGKAM*LEEATARDDAK
Trigger: CTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCAACATGGCCTTGCCTAACTTAGAGAACATGATCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp GGATGCGATTGGTGTCTGGACAAACTTCACTTCCCCTaGGATGGTAGCTGTCTTGAGCCCTGCCTGGTTAAT +
Preference number: 6 (lower is better)
Translates to: GCDWCLDKLHFP*DGSCLEPCLVN
Trigger: ATTAACCAGGCAGGGCTCAAGACAGCTACCATCCAAGGGGAAGTGAAGTTTGTCCAGACACCAATCGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CCA 72 bp TGGTTTCCCGAGTCCAAGATTTGTGAGCCATGCTTTTaGGGGACTCATCTTGCTTCTCTGAGGATATCTGGG +
Preference number: 6 (lower is better)
Translates to: WFPESKICEPCF*GTHLASLRISG
Trigger: CCCAGATATCCTCAGAGAAGCAAGATGAGTCCCCCAAAAGCATGGCTCACAAATCTTGGACTCGGGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp TGGTCACTCTGTCTTTCCACAATGTCCACTGAATCCTaGCCGCAGCAGGGAAATGTACTGATACCTGTCACC +
Preference number: 6 (lower is better)
Translates to: WSLCLSTMSTES*PQQGNVLIPVT
Trigger: GGTGACAGGTATCAGTACATTTCCCTGCTGCGGCAAGGATTCAGTGGACATTGTGGAAAGACAGAGTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 72 bp GCCTTCTGTAGACTGTGCTCCGACGCCTGGATGAGCTaGTTTGACCAGAAAAGATGTTTAGAGGTCTGCACA +
Preference number: 6 (lower is better)
Translates to: AFCRLCSDAWMS*FDQKRCLEVCT
Trigger: TGTGCAGACCTCTAAACATCTTTTCTGGTCAAACAAGCTCATCCAGGCGTCGGAGCACAGTCTACAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 90 bp TTTTCTAAGGCCTTCTGTAGACTGTGCTCCGACGCCTGGATGAGCTaGTTTGACCAGAAAAGATGTTTAGAGGTCTGCACAGGGATGGAG +
Preference number: 6 (lower is better)
Translates to: FSKAFCRLCSDAWMS*FDQKRCLEVCTGME
Trigger: CTCCATCCCTGTGCAGACCTCTAAACATCTTTTCTGGTCAAACAAGCTCATCCAGGCGTCGGAGCACAGTCTACAGAAGGCCTTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS TCA 72 bp CAAGCTACATTCCTGGTTTCCCGAGTCCAAGATTTGTaGGCCATGCTTTTGGGGGACTCATCTTGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QATFLVSRVQDL*AMLLGDSSCFS
Trigger: AGAGAAGCAAGATGAGTCCCCCAAAAGCATGGCTCACAAATCTTGGACTCGGGAAACCAGGAATGTAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS GCA 72 bp CATTCCTGGTTTCCCGAGTCCAAGATTTGTGAGCCATaGTTTTGGGGGACTCATCTTGCTTCTCTGAGGATA +
Preference number: 6 (lower is better)
Translates to: HSWFPESKICEP*FWGTHLASLRI
Trigger: TATCCTCAGAGAAGCAAGATGAGTCCCCCAAAAGCATGGCTCACAAATCTTGGACTCGGGAAACCAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2
CDS CAA 90 bp TCAGATGTTCCTTTGATCATGTTCTCTAAGTTAGGCAAGGCCATGTaGCTGGAGGAGGCTACAGCCAGAGACGATGCGAAGTTGATCAGA +
Preference number: 6 (lower is better)
Translates to: SDVPLIMFSKLGKAM*LEEATARDDAKLIR
Trigger: TCTGATCAACTTCGCATCGTCTCTGGCTGTAGCCTCCTCCAGCAACATGGCCTTGCCTAACTTAGAGAACATGATCAAAGGAACATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103076.2