Pregenerated sensors for SPATA31D1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043986Ensembl transcript IDs: ENSMUST00000052978.6
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGCATGGTATCTGCCGCACCATGCCTGTGCCCCGGTTGCTCCTTaGGGACCTTCCCAAAGTCTCTCAGGGCTTTCTGAGCTACAGTGT | + |
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Preference number: 5 (lower is better) Translates to: GAWYLPHHACAPVAP*GPSQSLSGLSELQC Trigger: ACACTGTAGCTCAGAAAGCCCTGAGAGACTTTGGGAAGGTCCCCAAGGAGCAACCGGGGCACAGGCATGGTGCGGCAGATACCATGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 90 bp | CAGAGGCAGAGCAGTCTTCTAGGCTGGCCCATGAGAGCAGTCGCCTaGCCTTCACTGTGGCTCCATTGCACACATCACAACGGGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: QRQSSLLGWPMRAVA*PSLWLHCTHHNGDP Trigger: AGGATCCCCGTTGTGATGTGTGCAATGGAGCCACAGTGAAGGTCAGGCGACTGCTCTCATGGGCCAGCCTAGAAGACTGCTCTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 90 bp | ATGAGGCCTCAGTCACAGAAGCTGTGGAGGCCATGGAAGCCATACTaGATGCAGAGGCAGAGCAGTCTTCTAGGCTGGCCCATGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: MRPQSQKLWRPWKPY*MQRQSSLLGWPMRA Trigger: TGCTCTCATGGGCCAGCCTAGAAGACTGCTCTGCCTCTGCATCCAGTATGGCTTCCATGGCCTCCACAGCTTCTGTGACTGAGGCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 90 bp | GAGGTGATCCAGTGGGAAACCAGTGCTTGTGAGAGTGGGCTCTGGTaGCAGAGAGTCACCCTGTGGTGTGCCCAAAAGGGTGTCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: EVIQWETSACESGLW*QRVTLWCAQKGVFQ Trigger: TTGGAAGACACCCTTTTGGGCACACCACAGGGTGACTCTCTGCCACCAGAGCCCACTCTCACAAGCACTGGTTTCCCACTGGATCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 90 bp | AGAGCTGATATCCCGAAGGGCTTGGGGAGAGGGAAGAAGAGAGAGTaGATGAGGCCTCAGTCACAGAAGCTGTGGAGGCCATGGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RADIPKGLGRGKKRE*MRPQSQKLWRPWKP Trigger: TGGCTTCCATGGCCTCCACAGCTTCTGTGACTGAGGCCTCATTCACTCTCTCTTCTTCCCTCTCCCCAAGCCCTTCGGGATATCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 90 bp | AGGCTGCTGCTGGTAGGACACTGGCAAGGCATCACAAGTTGTTGTTaGATGGAGAAACTGGTCACCATGGCTGCCAGCCAAGGAGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RLLLVGHWQGITSCC*MEKLVTMAASQGEN Trigger: ATTCTCTCCTTGGCTGGCAGCCATGGTGACCAGTTTCTCCATGCAACAACAACTTGTGATGCCTTGCCAGTGTCCTACCAGCAGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 90 bp | GTAACGTCTCAGGCCCTGCAACCCCTTCTATTTTCCACGACCTCTTaGCAGATTGAGGGCTGTCCTTGTTCAGACCCTTGCCTAAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VTSQALQPLLFSTTS*QIEGCPCSDPCLRS Trigger: ACTCCTTAGGCAAGGGTCTGAACAAGGACAGCCCTCAATCTGCCAAGAGGTCGTGGAAAATAGAAGGGGTTGCAGGGCCTGAGACGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 90 bp | GGGGAGTCTGTGGTCCTGTTGAACCAGATGCACATGGAAGAGCAGTaGGATGACAGTGTAGTGATACAGCTCATGGACTCGCTGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GESVVLLNQMHMEEQ*DDSVVIQLMDSLWR Trigger: TCTCCACAGCGAGTCCATGAGCTGTATCACTACACTGTCATCTCACTGCTCTTCCATGTGCATCTGGTTCAACAGGACCACAGACTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 90 bp | GCACTCTTGCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTGGTTaGAGGCCACCGAGCTGCTCTTTGACTATGTTACTGACCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: ALLHWLAFEILVGRG*RPPSCSLTMLLTLL Trigger: CAACAAGGTCAGTAACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCAAGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 90 bp | GACATTGGCTTACCTGTGAGGTCTCTGAAGATTGATCTGACAGACTaGCTGAGTGGCCCTGTAGGTTCTCATGGTCAGATGGCAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: DIGLPVRSLKIDLTD*LSGPVGSHGQMAGC Trigger: ACAGCCTGCCATCTGACCATGAGAACCTACAGGGCCACTCAGGCAGTCTGTCAGATCAATCTTCAGAGACCTCACAGGTAAGCCAATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 90 bp | GTCTGTGGTCCTGTTGAACCAGATGCACATGGAAGAGCAGTGAGATaGCAGTGTAGTGATACAGCTCATGGACTCGCTGTGGAGATAAGG | + |
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Preference number: 5 (lower is better) Translates to: VCGPVEPDAHGRAVR*QCSDTAHGLAVEIR Trigger: CCTTATCTCCACAGCGAGTCCATGAGCTGTATCACTACACTGTCATCTCACTGCTCTTCCATGTGCATCTGGTTCAACAGGACCACAGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 90 bp | GGGTCTTTCGCCATCATGTTGTACTCTAGGTGGTGGATTTCCGATTaGAATAGAGCTTTTGCCTCCTGGGATCTGCGGAAATACACACCG | + |
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Preference number: 5 (lower is better) Translates to: GSFAIMLYSRWWISD*NRAFASWDLRKYTP Trigger: CGGTGTGTATTTCCGCAGATCCCAGGAGGCAAAAGCTCTATTGCAATCGGAAATCCACCACCTAGAGTACAACATGATGGCGAAAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 90 bp | TTTAGCACTCTTGCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTaGTTGAAGGCCACCGAGCTGCTCTTTGACTATGTTACTGACCTT | + |
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Preference number: 5 (lower is better) Translates to: FSTLALAGFRDLGRS*LKATELLFDYVTDL Trigger: AAGGTCAGTAACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCAAGAGTGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 90 bp | CTTTGCACAACAGCTTGCAGCTTCCTCCGCTCCCGAGCTTCTCCATaGAAGTTTCTGAATTCATTAAATGACGCTCTCCTTTCCCGCTTA | + |
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Preference number: 5 (lower is better) Translates to: LCTTACSFLRSRASP*KFLNSLNDALLSRL Trigger: TAAGCGGGAAAGGAGAGCGTCATTTAATGAATTCAGAAACTTCCATGGAGAAGCTCGGGAGCGGAGGAAGCTGCAAGCTGTTGTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | GCGCATGGTATCTGCCGCACCATGCCTGTGCCCCGGTaGCTCCTTGGGGACCTTCCCAAAGTCTCTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AHGICRTMPVPR*LLGDLPKVSQG Trigger: GCCCTGAGAGACTTTGGGAAGGTCCCCAAGGAGCAACCGGGGCACAGGCATGGTGCGGCAGATACCATGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | GGAGATAAGGGAGGCCCCAGAAGTGCTGCATGGGCATaGCCTCTAACTGGCCCCCAGAGCTCTGCACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GDKGGPRSAAWA*PLTGPQSSALE Trigger: CTCAAGTGCAGAGCTCTGGGGGCCAGTTAGAGGCCATGCCCATGCAGCACTTCTGGGGCCTCCCTTATCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | CACACCGCAAACCCTAACCTGAGATTGAGAGGACGGTaGCGGCCCTGGGAGTGTTTGAAGCTGGGAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HTANPNLRLRGR*RPWECLKLGVG Trigger: CCCCACTCCCAGCTTCAAACACTCCCAGGGCCGTCACCGTCCTCTCAATCTCAGGTTAGGGTTTGCGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | CTGCTGCCCCCTAGGGGAAAGGAGGCTCCTAGGTTCTaGTCAGCAGTTGGTTCTGCTTCTCCTTCCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPPRGKEAPRF*SAVGSASPSLS Trigger: GGACAGGGAAGGAGAAGCAGAACCAACTGCTGAGCAGAACCTAGGAGCCTCCTTTCCCCTAGGGGGCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | GGGTCGGGCTATCCTGCGCACGGTGAATCTTCCCACTaGGTTGTAACGTCTCAGGCCCTGCAACCCCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GSGYPAHGESSH*VVTSQALQPLL Trigger: TAGAAGGGGTTGCAGGGCCTGAGACGTTACAACCCAGTGGGAAGATTCACCGTGCGCAGGATAGCCCGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TATCTGCCGCACCATGCCTGTGCCCCGGTTGCTCCTTaGGGACCTTCCCAAAGTCTCTCAGGGCTTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YLPHHACAPVAP*GPSQSLSGLSE Trigger: CTCAGAAAGCCCTGAGAGACTTTGGGAAGGTCCCCAAGGAGCAACCGGGGCACAGGCATGGTGCGGCAGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TGTGAGAGTGGGCTCTGGTGGCAGAGAGTCACCCTGTaGTGTGCCCAAAAGGGTGTCTTCCAAGGGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: CESGLWWQRVTL*CAQKGVFQGGE Trigger: TTCACCCCCTTGGAAGACACCCTTTTGGGCACACCACAGGGTGACTCTCTGCCACCAGAGCCCACTCTCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | GACGCGGATGGGCGAGGCTGTAAAGCCTCACATTTCTaGGGCTGTCTGGCCCTTTCTGCCACGCATCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: DADGRGCKASHF*GCLALSATHLF Trigger: AAAGAGATGCGTGGCAGAAAGGGCCAGACAGCCCCAGAAATGTGAGGCTTTACAGCCTCGCCCATCCGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | AGCAGGCATCTCAGGCTCCTGTGGCTGCACCTGAACTaGATTGGTGAGAGCGCTGGAAGGCATCTGATCATG | + |
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Preference number: 6 (lower is better) Translates to: SRHLRLLWLHLN*IGESAGRHLIM Trigger: CATGATCAGATGCCTTCCAGCGCTCTCACCAATGCAGTTCAGGTGCAGCCACAGGAGCCTGAGATGCCTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TTTGCTGAGCTGCAGGATGTGCCACGGAAGGAGACTTaGGAAGTGGGTGAGGTAGGAGGTGATCCAGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FAELQDVPRKET*EVGEVGGDPVG Trigger: TCCCACTGGATCACCTCCTACCTCACCCACTTCCCAAGTCTCCTTCCGTGGCACATCCTGCAGCTCAGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | ACGGCCCTGGGAGTGTTTGAAGCTGGGAGTGGGGTGTaGCAAGCTGGATGCTCTGGTACTGAGATTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TALGVFEAGSGV*QAGCSGTEIES Trigger: TGACTCAATCTCAGTACCAGAGCATCCAGCTTGCCACACCCCACTCCCAGCTTCAAACACTCCCAGGGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 90 bp | CACCAGGCTGCTGCTGGTAGGACACTGGCAAGGCATCACAAGTTGTaGTTGCATGGAGAAACTGGTCACCATGGCTGCCAGCCAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HQAAAGRTLARHHKL*LHGETGHHGCQPRR Trigger: TCTCCTTGGCTGGCAGCCATGGTGACCAGTTTCTCCATGCAACAACAACTTGTGATGCCTTGCCAGTGTCCTACCAGCAGCAGCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | AGCAGTCTTCTAGGCTGGCCCATGAGAGCAGTCGCCTaGCCTTCACTGTGGCTCCATTGCACACATCACAAC | + |
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Preference number: 6 (lower is better) Translates to: SSLLGWPMRAVA*PSLWLHCTHHN Trigger: GTTGTGATGTGTGCAATGGAGCCACAGTGAAGGTCAGGCGACTGCTCTCATGGGCCAGCCTAGAAGACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | TCTTGGCAGATTGAGGGCTGTCCTTGTTCAGACCCTTaGCTAAGGAGTGAGCAGGCATCTCAGGCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SWQIEGCPCSDP*LRSEQASQAPV Trigger: CACAGGAGCCTGAGATGCCTGCTCACTCCTTAGGCAAGGGTCTGAACAAGGACAGCCCTCAATCTGCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | ATGAGCCTCTTTCGAAGGTGCTGCTCGAACATCTTCTaGAACCCGTCAGCCAGGGGGAAGTCTCTAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: MSLFRRCCSNIF*NPSARGKSLGG Trigger: TCCTCCTAGAGACTTCCCCCTGGCTGACGGGTTCCAGAAGATGTTCGAGCAGCACCTTCGAAAGAGGCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | CAGGCCCTGCAACCCCTTCTATTTTCCACGACCTCTTaGCAGATTGAGGGCTGTCCTTGTTCAGACCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QALQPLLFSTTS*QIEGCPCSDPC Trigger: GCAAGGGTCTGAACAAGGACAGCCCTCAATCTGCCAAGAGGTCGTGGAAAATAGAAGGGGTTGCAGGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | AATGACGCTCTCCTTTCCCGCTTAGCTCTGCCTTGTTaGTTCCTGACTCCTTGGCTGGTCTGTGTGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: NDALLSRLALPC*FLTPWLVCVGK Trigger: CTTACCCACACAGACCAGCCAAGGAGTCAGGAAGCAACAAGGCAGAGCTAAGCGGGAAAGGAGAGCGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | GGAGCTCTGAGCACCAGGCTGCTGCTGGTAGGACACTaGCAAGGCATCACAAGTTGTTGTTGCATGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: GALSTRLLLVGH*QGITSCCCMEK Trigger: TTTCTCCATGCAACAACAACTTGTGATGCCTTGCCAGTGTCCTACCAGCAGCAGCCTGGTGCTCAGAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TCTGACAGACTGCCTGAGTGGCCCTGTAGGTTCTCATaGTCAGATGGCAGGCTGTTGTCTAGAGCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SDRLPEWPCRFS*SDGRLLSRAVL Trigger: CAAGACTGCTCTAGACAACAGCCTGCCATCTGACCATGAGAACCTACAGGGCCACTCAGGCAGTCTGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | GCTGGTAGGACACTGGCAAGGCATCACAAGTTGTTGTaGCATGGAGAAACTGGTCACCATGGCTGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGRTLARHHKLL*HGETGHHGCQP Trigger: TGGCTGGCAGCCATGGTGACCAGTTTCTCCATGCAACAACAACTTGTGATGCCTTGCCAGTGTCCTACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | CTGGGGCTGTCTGGCCCTTTCTGCCACGCATCTCTTTaGATCAACAAAAGCAGCGGCCTGATTGTGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: LGLSGPFCHASL*INKSSGLIVEP Trigger: AGGTTCCACAATCAGGCCGCTGCTTTTGTTGATCAAAAGAGATGCGTGGCAGAAAGGGCCAGACAGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | CACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTGGTTaGAGGCCACCGAGCTGCTCTTTGACTATGTTACTG | + |
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Preference number: 6 (lower is better) Translates to: HWLAFEILVGRG*RPPSCSLTMLL Trigger: CAGTAACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | CTGGTAGGACACTGGCAAGGCATCACAAGTTGTTGTTaGATGGAGAAACTGGTCACCATGGCTGCCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LVGHWQGITSCC*MEKLVTMAASQ Trigger: TTGGCTGGCAGCCATGGTGACCAGTTTCTCCATGCAACAACAACTTGTGATGCCTTGCCAGTGTCCTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TCCCGCTTAGCTCTGCCTTGTTGCTTCCTGACTCCTTaGCTGGTCTGTGTGGGTAAGAAGGGTTTCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: SRLALPCCFLTP*LVCVGKKGFSI Trigger: GATACTGAAACCCTTCTTACCCACACAGACCAGCCAAGGAGTCAGGAAGCAACAAGGCAGAGCTAAGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | CTTGCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTaGTTGAAGGCCACCGAGCTGCTCTTTGACTATGTT | + |
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Preference number: 6 (lower is better) Translates to: LALAGFRDLGRS*LKATELLFDYV Trigger: AACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | GCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTGGTaGAAGGCCACCGAGCTGCTCTTTGACTATGTTACT | + |
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Preference number: 6 (lower is better) Translates to: ALAGFRDLGRSW*KATELLFDYVT Trigger: AGTAACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 90 bp | AGCACTCTTGCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGTGGTaGAAGGCCACCGAGCTGCTCTTTGACTATGTTACTGACCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: STLALAGFRDLGRSW*KATELLFDYVTDLV Trigger: AACAAGGTCAGTAACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCAAGAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | AAAGCCAGAGAGCCCAGAGCTGCTCTTAGATGCTTCTaGAGGGTCAGGATTTGCCCACAGCTGCGACTTATA | + |
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Preference number: 6 (lower is better) Translates to: KAREPRAALRCF*RVRICPQLRLI Trigger: TATAAGTCGCAGCTGTGGGCAAATCCTGACCCTTCAGAAGCATCTAAGAGCAGCTCTGGGCTCTCTGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | TTCCGACATTGGCTTACCTGTGAGGTCTCTGAAGATTaGTCTGACAGACTGCCTGAGTGGCCCTGTAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FRHWLTCEVSED*SDRLPEWPCRF Trigger: GAACCTACAGGGCCACTCAGGCAGTCTGTCAGATCAATCTTCAGAGACCTCACAGGTAAGCCAATGTCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | TGGTTCGACACAGTGTTGGGCCAGGCTTTGTTGTCTTaGTGCTTAAAGCCAGAGAGCCCAGAGCTGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: WFDTVLGQALLS*CLKPESPELLL Trigger: TAAGAGCAGCTCTGGGCTCTCTGGCTTTAAGCACAAAGACAACAAAGCCTGGCCCAACACTGTGTCGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | CTTCCAGATTGGTTCGACACAGTGTTGGGCCAGGCTTaGTTGTCTTTGTGCTTAAAGCCAGAGAGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LPDWFDTVLGQA*LSLCLKPESPE Trigger: CTCTGGGCTCTCTGGCTTTAAGCACAAAGACAACAAAGCCTGGCCCAACACTGTGTCGAACCAATCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | CCTGTTGAACCAGATGCACATGGAAGAGCAGTGAGATaGCAGTGTAGTGATACAGCTCATGGACTCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PVEPDAHGRAVR*QCSDTAHGLAV Trigger: CACAGCGAGTCCATGAGCTGTATCACTACACTGTCATCTCACTGCTCTTCCATGTGCATCTGGTTCAACAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | TTACCTGTGAGGTCTCTGAAGATTGATCTGACAGACTaGCTGAGTGGCCCTGTAGGTTCTCATGGTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LPVRSLKIDLTD*LSGPVGSHGQM Trigger: CATCTGACCATGAGAACCTACAGGGCCACTCAGGCAGTCTGTCAGATCAATCTTCAGAGACCTCACAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | CTCTCCGGGTCTTTCGCCATCATGTTGTACTCTAGGTaGTGGATTTCCGATTGCAATAGAGCTTTTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSGSFAIMLYSR*WISDCNRAFAS Trigger: GGAGGCAAAAGCTCTATTGCAATCGGAAATCCACCACCTAGAGTACAACATGATGGCGAAAGACCCGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TCTACAGAAACAGACTTCTCTTGGGGGCTTCCAGATTaGTTCGACACAGTGTTGGGCCAGGCTTTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: STETDFSWGLPD*FDTVLGQALLS Trigger: AGACAACAAAGCCTGGCCCAACACTGTGTCGAACCAATCTGGAAGCCCCCAAGAGAAGTCTGTTTCTGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | AAAGCCCACTCCCTCTCCGGGTCTTTCGCCATCATGTaGTACTCTAGGTGGTGGATTTCCGATTGCAATAGA | + |
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Preference number: 6 (lower is better) Translates to: KAHSLSGSFAIM*YSRWWISDCNR Trigger: TCTATTGCAATCGGAAATCCACCACCTAGAGTACAACATGATGGCGAAAGACCCGGAGAGGGAGTGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | TTCTCTTGGGGGCTTCCAGATTGGTTCGACACAGTGTaGGGCCAGGCTTTGTTGTCTTTGTGCTTAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FSWGLPDWFDTV*GQALLSLCLKP Trigger: TGGCTTTAAGCACAAAGACAACAAAGCCTGGCCCAACACTGTGTCGAACCAATCTGGAAGCCCCCAAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | GTGCTTGGTGTATTCCCATCTCCATCTTTAGCACTCTaGCACTGGCTGGCTTTCGAGATCTTGGTAGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: VLGVFPSPSLAL*HWLAFEILVGR Trigger: ACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCAAGAGTGCTAAAGATGGAGATGGGAATACACCAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS GCA 72 bp | GCCATCATGTTGTACTCTAGGTGGTGGATTTCCGATTaGAATAGAGCTTTTGCCTCCTGGGATCTGCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AIMLYSRWWISD*NRAFASWDLRK Trigger: TTTCCGCAGATCCCAGGAGGCAAAAGCTCTATTGCAATCGGAAATCCACCACCTAGAGTACAACATGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | GTCCTTCAGTGTAAGAACGTCAGCCTGGCTTTCCTCTaGTCTCTCAAGTATTTTCAGGACTTTCTGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLQCKNVSLAFL*SLKYFQDFLGH Trigger: GTGCCCCAGAAAGTCCTGAAAATACTTGAGAGACAAGAGGAAAGCCAGGCTGACGTTCTTACACTGAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | TGGCCCTGTAGGTTCTCATGGTCAGATGGCAGGCTGTaGTCTAGAGCAGTCTTGGAGTTACTGCAGATATAT | + |
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Preference number: 6 (lower is better) Translates to: WPCRFSWSDGRL*SRAVLELLQIY Trigger: ATATATCTGCAGTAACTCCAAGACTGCTCTAGACAACAGCCTGCCATCTGACCATGAGAACCTACAGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 90 bp | TCCTTCCCTGTCCTTCAGTGTAAGAACGTCAGCCTGGCTTTCCTCTaGTCTCTCAAGTATTTTCAGGACTTTCTGGGGCACTGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFPVLQCKNVSLAFL*SLKYFQDFLGHCEM Trigger: CATTTCACAGTGCCCCAGAAAGTCCTGAAAATACTTGAGAGACAAGAGGAAAGCCAGGCTGACGTTCTTACACTGAAGGACAGGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS TCA 72 bp | CCGAGCTTCTCCATGGAAGTTTCTGAATTCATTAAATaGCGCTCTCCTTTCCCGCTTAGCTCTGCCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSFSMEVSEFIK*RSPFPLSSALL Trigger: CAACAAGGCAGAGCTAAGCGGGAAAGGAGAGCGTCATTTAATGAATTCAGAAACTTCCATGGAGAAGCTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TTTACTGTTTTTCTCTCTACAGAAACAGACTTCTCTTaGGGGCTTCCAGATTGGTTCGACACAGTGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FTVFLSTETDFS*GLPDWFDTVLG Trigger: GCCCAACACTGTGTCGAACCAATCTGGAAGCCCCCAAGAGAAGTCTGTTTCTGTAGAGAGAAAAACAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 90 bp | TGTAGGTTCTCATGGTCAGATGGCAGGCTGTTGTCTAGAGCAGTCTaGGAGTTACTGCAGATATATTTTTGGATAATCTCTAGAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: CRFSWSDGRLLSRAV*ELLQIYFWIISRVC Trigger: ACAGACTCTAGAGATTATCCAAAAATATATCTGCAGTAACTCCAAGACTGCTCTAGACAACAGCCTGCCATCTGACCATGAGAACCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CAA 72 bp | TCATGGTCAGATGGCAGGCTGTTGTCTAGAGCAGTCTaGGAGTTACTGCAGATATATTTTTGGATAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SWSDGRLLSRAV*ELLQIYFWIIS Trigger: AGAGATTATCCAAAAATATATCTGCAGTAACTCCAAGACTGCTCTAGACAACAGCCTGCCATCTGACCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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| CDS CCA 72 bp | TCTAGAGCAGTCTTGGAGTTACTGCAGATATATTTTTaGATAATCTCTAGAGTCTGTTCGTGTGCTTTTACT | + |
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Preference number: 6 (lower is better) Translates to: SRAVLELLQIYF*IISRVCSCAFT Trigger: AGTAAAAGCACACGAACAGACTCTAGAGATTATCCAAAAATATATCTGCAGTAACTCCAAGACTGCTCTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052978.6 |
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