Pregenerated sensors for SPATA31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056223Ensembl transcript IDs: ENSMUST00000070216.9, ENSMUST00000221202.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGACATTGAATAAGAAAAAGGGAGAAGGGAGAGTTGACGTTGTCTaGGGGATCCAGGCGGCAGCTACCAGAGACTCACTGTGGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: MTLNKKKGEGRVDVV*GIQAAATRDSLWRE Trigger: TTCTCTCCACAGTGAGTCTCTGGTAGCTGCCGCCTGGATCCCTCAGACAACGTCAACTCTCCCTTCTCCCTTTTTCTTATTCAATGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR CCA 90 bp | GGTAGAGAAGAGGGTAGTAGGACTGGGAGATTCAAAGCTGGGGTCTaGAATTCAAGTGGAGACAGAATTAAGTGTGGAGATTGGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GREEGSRTGRFKAGV*NSSGDRIKCGDWRS Trigger: GGACCTCCAATCTCCACACTTAATTCTGTCTCCACTTGAATTCCAGACCCCAGCTTTGAATCTCCCAGTCCTACTACCCTCTTCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR CCA 90 bp | AGAAAAGCTGGTCACATTTCTGTTGAAAATGGTCTTCTGAGATCTTaGGATAAGATAGTTTCTGAGTGGCCACCTGCTCTTCTGATTTTT | + |
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Preference number: 1 (lower is better) Translates to: RKAGHISVENGLLRS*DKIVSEWPPALLIF Trigger: AAAAATCAGAAGAGCAGGTGGCCACTCAGAAACTATCTTATCCCAAGATCTCAGAAGACCATTTTCAACAGAAATGTGACCAGCTTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR CAA 90 bp | GAGATTGGAGGTCCAGATAGGACAGAGGATGTGTATGGGGAAGCATaGGTGACATTTTATCCTGCAGTTGAATTGGATAAACACTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: EIGGPDRTEDVYGEA*VTFYPAVELDKHLR Trigger: TCTCAAGTGTTTATCCAATTCAACTGCAGGATAAAATGTCACCAATGCTTCCCCATACACATCCTCTGTCCTATCTGGACCTCCAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGGAGGTATTGTGGCTTACTTTGTGATTGAGAATAAGATGTACCAAAATGGTCTTCTGAGATCTTaGGATAAGATAGTTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QLGGIVAYFVIENKMYQNGLLRS*DKIVSE Trigger: CTCAGAAACTATCTTATCCCAAGATCTCAGAAGACC...ATTTTGGTACATCTTATTCTCAATCACAAAGTAAGCCACAATACCTCCCAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTAGTAGGACTGGGAGATTCAAAGCTGGGGTCTGGAATTCAAGTGGAGACAAGGGAGAAGGGAGAGTaGACGTTGTCTGAGGGATCC | + |
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Preference number: 3 (lower is better) Translates to: RVVGLGDSKLGSGIQVETREKGE*TLSEGS Trigger: GGATCCCTCAGACAACGTCAACTCTCCCTTCTCCCT...TGTCTCCACTTGAATTCCAGACCCCAGCTTTGAATCTCCCAGTCCTACTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR TCA 72 bp | CAGATAGGACAGAGGATGTGTATGGGGAAGCATTGGTaGCATTTTATCCTGCAGTTGAATTGGATAAACACT | + |
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Preference number: 3 (lower is better) Translates to: QIGQRMCMGKHW*HFILQLNWINT Trigger: AGTGTTTATCCAATTCAACTGCAGGATAAAATGTCACCAATGCTTCCCCATACACATCCTCTGTCCTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGGGAGGTATTGTGGCTTACTTTGTGATTGAGAATAAGATGTACCAAAATGTGTATGGGGAAGCATaGGTGACATTTTATCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: QLGGIVAYFVIENKMYQNVYGEA*VTFYPA Trigger: TGCAGGATAAAATGTCACCAATGCTTCCCCATACAC...ATTTTGGTACATCTTATTCTCAATCACAAAGTAAGCCACAATACCTCCCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| 3UTR CAA 72 bp | GGTCCAGATAGGACAGAGGATGTGTATGGGGAAGCATaGGTGACATTTTATCCTGCAGTTGAATTGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: GPDRTEDVYGEA*VTFYPAVELDK Trigger: TTTATCCAATTCAACTGCAGGATAAAATGTCACCAATGCTTCCCCATACACATCCTCTGTCCTATCTGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| CDS-3UTR TCA 90 bp | GTGTATGGGGAAGCATTGGTGACATTTTATCCTGCAGTTGAATTGGATAAACACGGAGGTGAAGACAGATaGCTCTCAAGAAAAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VYGEALVTFYPAVELDKHGGEDR*LSRKGS Trigger: ACTTCCTTTTCTTGAGAGTCATCTGTCTTCACCTCC...GTGTTTATCCAATTCAACTGCAGGATAAAATGTCACCAATGCTTCCCCATACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| CDS-3UTR TCA 90 bp | TTAAATATATTCCCTAAAGAGTTCAAATGGTGTCCTGGGCTCATTTCTTCTAGACCCCAAGCTTCCTGGTaGACTTTATATTTGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: LNIFPKEFKWCPGLISSRPQASW*TLYLME Trigger: CTCCATCAAATATAAAGTTCACCAGGAAGCTTGGGG...TCTAGAAGAAATGAGCCCAGGACACCATTTGAACTCTTTAGGGAATATATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| CDS-3UTR GCA 90 bp | TATTCCCTAAAGAGTTCAAATGGTGTCCTGGGCTCATTTCTTCTAGAAATAATTGCCATGTGGTGTAAATaGTTTCCAGAAGAGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: YSLKSSNGVLGSFLLEIIAMWCK*FPEERE Trigger: TTCCCTCTCTTCTGGAAAGCATTTACACCACATGGC...AATTATTTCTAGAAGAAATGAGCCCAGGACACCATTTGAACTCTTTAGGGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221202.2 |
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| CDS CCA 90 bp | GCTGGGGTTCCGTGGGTTCTGTGGTTTCTTGTGGCTGGGGTTCCGTaGGTTCTGTGGTTTCTTGCTAAAGCGTACACTTCTCTGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGVPWVLWFLVAGVP*VLWFLAKAYTSLRQ Trigger: CTGCCTCAGAGAAGTGTACGCTTTAGCAAGAAACCACAGAACCCACGGAACCCCAGCCACAAGAAACCACAGAACCCACGGAACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 90 bp | TCTGAGAATTCACTAGGTTCAAAGCTGCGTTACGGGACAAGCGGCTaGGGTTCCGTGGGTTCTGTGGTTTCTTGTGGCTGGGGTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: SENSLGSKLRYGTSG*GSVGSVVSCGWGSV Trigger: CACGGAACCCCAGCCACAAGAAACCACAGAACCCACGGAACCCCAGCCGCTTGTCCCGTAACGCAGCTTTGAACCTAGTGAATTCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 90 bp | ATATGCCCACACTCTGGTTTGGTTGGCAGGGCTGTAGAAGGCTCATaGTCAACACCAAAGGGAAGCCTTCTCCTGGCCCTCTTACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: ICPHSGLVGRAVEGS*STPKGSLLLALLQE Trigger: TTCCTGTAAGAGGGCCAGGAGAAGGCTTCCCTTTGGTGTTGACCATGAGCCTTCTACAGCCCTGCCAACCAAACCAGAGTGTGGGCATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 90 bp | CCGTGGGTTCTGTGGTTTCTTGTGGCTGGGGTTCCGTGGGTTCTGTaGTTTCTTGCTAAAGCGTACACTTCTCTGAGGCAGTTGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PWVLWFLVAGVPWVL*FLAKAYTSLRQLVS Trigger: AGAAACCAACTGCCTCAGAGAAGTGTACGCTTTAGCAAGAAACCACAGAACCCACGGAACCCCAGCCACAAGAAACCACAGAACCCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 90 bp | GGGTTCCGTGGGTTCTGTGGTTTCTTGCTAAAGCGTACACTTCTCTaGGGCAGTTGGTTTCTGATGTGCCTGTTCTGTACAGAACACCTC | + |
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Preference number: 5 (lower is better) Translates to: GFRGFCGFLLKRTLL*GSWFLMCLFCTEHL Trigger: GAGGTGTTCTGTACAGAACAGGCACATCAGAAACCAACTGCCTCAGAGAAGTGTACGCTTTAGCAAGAAACCACAGAACCCACGGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 90 bp | TGGCTCTTCTGTGAGACTAGATGCTTTGGAGTACTGGGTCTCTGCTaGACCAGGCTATTGTCCATGTCTGCCACCACAATGTCACCTAAT | + |
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Preference number: 5 (lower is better) Translates to: WLFCETRCFGVLGLC*TRLLSMSATTMSPN Trigger: ATTAGGTGACATTGTGGTGGCAGACATGGACAATAGCCTGGTGCAGCAGAGACCCAGTACTCCAAAGCATCTAGTCTCACAGAAGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 90 bp | CCCAGATTCTTGCCAGATTCCTTTTCTAGCTGGAATTTTCTCTTCTaGCCCTCATTGCTGTGTTCACCAAGGGCTTGTAAGGTGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PRFLPDSFSSWNFLF*PSLLCSPRACKVPG Trigger: GCCTGGCACCTTACAAGCCCTTGGTGAACACAGCAATGAGGGCCAGAAGAGAAAATTCCAGCTAGAAAAGGAATCTGGCAAGAATCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 90 bp | GAGGTCTGGGCACAGAGTACAACAGGCAAGGACTCAATACTTAACTaGAAGAGTTTTACGGGCTTGAGTATCTTAAGGGGTAGACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: EVWAQSTTGKDSILN*KSFTGLSILRGRLH Trigger: GTGGAGTCTACCCCTTAAGATACTCAAGCCCGTAAAACTCTTTCAGTTAAGTATTGAGTCCTTGCCTGTTGTACTCTGTGCCCAGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 90 bp | AGTTGTCATAAGTTCCTGGGCCTCAGTCACATTGTTGTCCATATATaGTATTTTTCTCACTTGCCTTCGTTGGTTCTGGACAATGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SCHKFLGLSHIVVHI*YFSHLPSLVLDNGC Trigger: GCAGCCATTGTCCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGACTGAGGCCCAGGAACTTATGACAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 90 bp | AATTCTGTCTCCACATTATGTGGAAACTCACTAACAACTTTTTCCTaGTGTTTGTATGCCTCCAAATTTTGGTCACTCGTCCTTCTAGGC | + |
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Preference number: 5 (lower is better) Translates to: NSVSTLCGNSLTTFS*CLYASKFWSLVLLG Trigger: GCCTAGAAGGACGAGTGACCAAAATTTGGAGGCATACAAACATCAGGAAAAAGTTGTTAGTGAGTTTCCACATAATGTGGAGACAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | CAAAGCTGCGTTACGGGACAAGCGGCTGGGGTTCCGTaGGTTCTGTGGTTTCTTGTGGCTGGGGTTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSCVTGQAAGVP*VLWFLVAGVPW Trigger: CCACGGAACCCCAGCCACAAGAAACCACAGAACCCACGGAACCCCAGCCGCTTGTCCCGTAACGCAGCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | GACAAGCGGCTGGGGTTCCGTGGGTTCTGTGGTTTCTaGTGGCTGGGGTTCCGTGGGTTCTGTGGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DKRLGFRGFCGF*WLGFRGFCGFL Trigger: CAAGAAACCACAGAACCCACGGAACCCCAGCCACAAGAAACCACAGAACCCACGGAACCCCAGCCGCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | CTGTGGTTTCTTGTGGCTGGGGTTCCGTGGGTTCTGTaGTTTCTTGCTAAAGCGTACACTTCTCTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWFLVAGVPWVL*FLAKAYTSLRQ Trigger: CTGCCTCAGAGAAGTGTACGCTTTAGCAAGAAACCACAGAACCCACGGAACCCCAGCCACAAGAAACCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | TCTGATGTGCCTGTTCTGTACAGAACACCTCTGACATaGGCAACTGCCAGGGTAACTGGGTGCTCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDVPVLYRTPLT*ATARVTGCSPL Trigger: CAAAGGAGAGCACCCAGTTACCCTGGCAGTTGCTCATGTCAGAGGTGTTCTGTACAGAACAGGCACATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | TGTGAGACTAGATGCTTTGGAGTACTGGGTCTCTGCTaGACCAGGCTATTGTCCATGTCTGCCACCACAATG | + |
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Preference number: 6 (lower is better) Translates to: CETRCFGVLGLC*TRLLSMSATTM Trigger: CATTGTGGTGGCAGACATGGACAATAGCCTGGTGCAGCAGAGACCCAGTACTCCAAAGCATCTAGTCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | TTCTGTGAGACTAGATGCTTTGGAGTACTGGGTCTCTaGTGCACCAGGCTATTGTCCATGTCTGCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: FCETRCFGVLGL*CTRLLSMSATT Trigger: TGTGGTGGCAGACATGGACAATAGCCTGGTGCAGCAGAGACCCAGTACTCCAAAGCATCTAGTCTCACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | GCCTGTTCTGTACAGAACACCTCTGACATGAGCAACTaGCAGGGTAACTGGGTGCTCTCCTTTGCTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: ACSVQNTSDMSN*QGNWVLSFAVS Trigger: ACTTACAGCAAAGGAGAGCACCCAGTTACCCTGGCAGTTGCTCATGTCAGAGGTGTTCTGTACAGAACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | GGGAAAATTATCAGGAAGGATGGAGACTACCCAGTCTaGGGAAGGGTTGGGGGCCAAGATGTCATAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GKIIRKDGDYPV*GRVGGQDVIGF Trigger: GAAGCCTATGACATCTTGGCCCCCAACCCTTCCCAAGACTGGGTAGTCTCCATCCTTCCTGATAATTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | GAGACATGGGGGCTGGAGGAACTTCCCTGTGCTGGTTaGATTTTGAAGCATAGGGTTGATGTTGCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: ETWGLEELPCAG*ILKHRVDVAAS Trigger: TGATGCTGCAACATCAACCCTATGCTTCAAAATTCAACCAGCACAGGGAAGTTCCTCCAGCCCCCATGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | CCTTTTCTAGCTGGAATTTTCTCTTCTGGCCCTCATTaGTGTGTTCACCAAGGGCTTGTAAGGTGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PFLAGIFSSGPH*CVHQGLVRCQA Trigger: AGCCTGGCACCTTACAAGCCCTTGGTGAACACAGCAATGAGGGCCAGAAGAGAAAATTCCAGCTAGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | GCCAACATCTTGATTTGGCTCTTCTGTGAGACTAGATaGTTTGGAGTACTGGGTCTCTGCTGCACCAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: ANILIWLFCETR*FGVLGLCCTRL Trigger: TAGCCTGGTGCAGCAGAGACCCAGTACTCCAAAGCATCTAGTCTCACAGAAGAGCCAAATCAAGATGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | AGTGTCTACAGGAAGAGGCATGCTCCTGGAACGTTTTaGAGGGAGCACAGTAGTGGTATAGATTTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVYRKRHAPGTF*REHSSGIDLWL Trigger: CAGCCACAAATCTATACCACTACTGTGCTCCCTCCAAAACGTTCCAGGAGCATGCCTCTTCCTGTAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | ATTCCATTGGTGTTGAATGAGCCACTTTTGAATGTGTaGCTCCAGTTTCTCCCGGAGCTCACGGCAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: IPLVLNEPLLNV*LQFLPELTADG Trigger: CCCATCTGCCGTGAGCTCCGGGAGAAACTGGAGCAACACATTCAAAAGTGGCTCATTCAACACCAATGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | CAATATGTGCCTCCAGAGCCTGTCGAGTTTCTGGTTTaGGAAAGGCAAGCTTCTCTGAAGAGCACATGGACT | + |
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Preference number: 6 (lower is better) Translates to: QYVPPEPVEFLV*ERQASLKSTWT Trigger: AGTCCATGTGCTCTTCAGAGAAGCTTGCCTTTCTCAAACCAGAAACTCGACAGGCTCTGGAGGCACATATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | GATCTGGTCCTATGTACAGAAGTGGTTGAGGAGGTCTaGGCACAGAGTACAACAGGCAAGGACTCAATACTT | + |
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Preference number: 6 (lower is better) Translates to: DLVLCTEVVEEV*AQSTTGKDSIL Trigger: AAGTATTGAGTCCTTGCCTGTTGTACTCTGTGCCCAGACCTCCTCAACCACTTCTGTACATAGGACCAGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | GGCTCTGCCAGGTCATCTGTATCTGAGGCTTCCTGGTaGACTTTATATTTGATGGAGGTGAAGACAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: GSARSSVSEASW*TLYLMEVKTDD Trigger: GTCATCTGTCTTCACCTCCATCAAATATAAAGTTCACCAGGAAGCCTCAGATACAGATGACCTGGCAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 90 bp | CAAAACCTTACAATATGTGCCTCCAGAGCCTGTCGAGTTTCTGGTTaGAGAAAGGCAAGCTTCTCTGAAGAGCACATGGACTTTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: QNLTICASRACRVSG*RKASFSEEHMDFAE Trigger: TTCAGCAAAGTCCATGTGCTCTTCAGAGAAGCTTGCCTTTCTCAAACCAGAAACTCGACAGGCTCTGGAGGCACATATTGTAAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | GTTCACCAAGGGCTTGTAAGGTGCCAGGCTTGTCTCTaGTTTGACAATTTCCTATTACTGTGTTCTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VHQGLVRCQACL*FDNFLLLCSEA Trigger: AGCTTCAGAACACAGTAATAGGAAATTGTCAAACCAGAGACAAGCCTGGCACCTTACAAGCCCTTGGTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | AAGTTCCTGGGCCTCAGTCACATTGTTGTCCATATATaGTATTTTTCTCACTTGCCTTCGTTGGTTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: KFLGLSHIVVHI*YFSHLPSLVLD Trigger: GTCCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGACTGAGGCCCAGGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 90 bp | ATCTGTCCAACAGTTGTCATAAGTTCCTGGGCCTCAGTCACATTGTaGTCCATATATGGTATTTTTCTCACTTGCCTTCGTTGGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ICPTVVISSWASVTL*SIYGIFLTCLRWFW Trigger: CCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGACTGAGGCCCAGGAACTTATGACAACTGTTGGACAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | TTTTTCTTGAACTGGCTCTGCCAGGTCATCTGTATCTaGGGCTTCCTGGTGAACTTTATATTTGATGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FFLNWLCQVICI*GFLVNFIFDGG Trigger: ACCTCCATCAAATATAAAGTTCACCAGGAAGCCTCAGATACAGATGACCTGGCAGAGCCAGTTCAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | TTATCATCTGTCTCAAGCATGGTTTTCCTAGGAATCTaGCTACTTCAGCTGCTGATCTGGTCCTATGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LSSVSSMVFLGI*LLQLLIWSYVQ Trigger: CTGTACATAGGACCAGATCAGCAGCTGAAGTAGTCAGATTCCTAGGAAAACCATGCTTGAGACAGATGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS GCA 72 bp | GTCACATTGTTGTCCATATATGGTATTTTTCTCACTTaGCTTCGTTGGTTCTGGACAATGGCTGCTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: VTLLSIYGIFLT*LRWFWTMAAVG Trigger: TCCTACAGCAGCCATTGTCCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | GAGGGCACAGTGCCTAGGACAATAAAGATGGTGATTTaGATTTCCTGGCACTATTGTTCTGTTCTGAGAATT | + |
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Preference number: 6 (lower is better) Translates to: EGTVPRTIKMVI*ISWHYCSVLRI Trigger: AATTCTCAGAACAGAACAATAGTGCCAGGAAATTCAAATCACCATCTTTATTGTCCTAGGCACTGTGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | GTTGTCCATATATGGTATTTTTCTCACTTGCCTTCGTaGGTTCTGGACAATGGCTGCTGTAGGATTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: VVHIWYFSHLPS*VLDNGCCRITF Trigger: AAAGGTAATCCTACAGCAGCCATTGTCCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | ACAGTTGTCATAAGTTCCTGGGCCTCAGTCACATTGTaGTCCATATATGGTATTTTTCTCACTTGCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: TVVISSWASVTL*SIYGIFLTCLR Trigger: ACGAAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGACTGAGGCCCAGGAACTTATGACAACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | CCAACAGTTGTCATAAGTTCCTGGGCCTCAGTCACATaGTTGTCCATATATGGTATTTTTCTCACTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PTVVISSWASVT*LSIYGIFLTCL Trigger: AAGGCAAGTGAGAAAAATACCATATATGGACAACAATGTGACTGAGGCCCAGGAACTTATGACAACTGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CCA 72 bp | TTGTCCATATATGGTATTTTTCTCACTTGCCTTCGTTaGTTCTGGACAATGGCTGCTGTAGGATTACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSIYGIFLTCLR*FWTMAAVGLPF Trigger: AAAAGGTAATCCTACAGCAGCCATTGTCCAGAACCAACGAAGGCAAGTGAGAAAAATACCATATATGGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | AGGCTTCTTGAGGTTTCTGGACCATCAAGGGTAAAGTaGATCTATTTTCTATTTGTTTTGCCAGTGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RLLEVSGPSRVK*IYFLFVLPVRV Trigger: AACCCTCACTGGCAAAACAAATAGAAAATAGATCAACTTTACCCTTGATGGTCCAGAAACCTCAAGAAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS CAA 72 bp | ATACTTTATTTCACTCTGTCTCTTAGTGCCCTCACTTaGATAAGTAGGGGCCAACATCTTGATTTGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILYFTLSLSALT*ISRGQHLDLAL Trigger: AAGAGCCAAATCAAGATGTTGGCCCCTACTTATCAAAGTGAGGGCACTAAGAGACAGAGTGAAATAAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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| CDS TCA 72 bp | TCCACATTATGTGGAAACTCACTAACAACTTTTTCCTaGTGTTTGTATGCCTCCAAATTTTGGTCACTCGTC | + |
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Preference number: 6 (lower is better) Translates to: STLCGNSLTTFS*CLYASKFWSLV Trigger: GACGAGTGACCAAAATTTGGAGGCATACAAACATCAGGAAAAAGTTGTTAGTGAGTTTCCACATAATGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070216.9 |
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